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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11798#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 3176 fasta sequence
[TGCCATGGACGGGTAGAAAGGTACAGTGGCGGCGCCGACACGCGGTGGAGGAGGAGGCGGCGGCGGCGGCGGCGATGGGGCTGCTGTCGAACAGGGTGGAGCGGTCGGAGATCAGGCCGGGGGATCACATCTACACATGGAGGGCGGTGTACGCCTACTCCCACCACGGTACGCGCGCGCCCACCCCCTCCATCCTCTTCCTCCTCGGATGCCATCCCGGTTGCTTGAATTGTTGTCGCCACTCGCCAATGGTGGCGGCGGCGGCGGTTGCGGGTTTAGGTTTGGGAACTAATCCGGCGGCGGCTCTGTGGCTCTCCTCCTCCGGCGCTGCTTCGAATTTTCTCGTGCGATTGACGTCTGATCAATGGTTGTTGACTTGACCGGGAAATTCTGGCTCGGCGAGTCAACGGGGGATTTTTTTCCCCCTTTTTTTTGGTCTGTGCGGCTACTGGATCGGAAATTTCACTGCGATTGCTGGGTCAGGAACAAATGCGATCGAAATTGCCTAGTTGGACTGGAAATTTTGTTCGGCCGGCTCAATGGGGGGAACATTTGCGATCTGAATTTTCGAGTTGGGGTTGTCTCTTGCTTAGTTCATCGGTAACTGAAGGGCGTGTCTTCGTCTCAGTTTTCCATTCTGTCGGATTTGGGATTTCTTTCGCCTCATACTTCCTGCGTGATGTTCTCTTCTCGAGCAAACCCCTCTGCTTGAAGTACGGATCACGTGGTTGGTTGGACAAGTGCGTCAATCATCCAACTCTCTGATTGAGTGATTGTTCAGACTTTTAACTGTTTACAGATTCGTAGTAGAACTCAGCAGTAACACGCAAATCATCGTGCATTTGTACTATCTTCAGTTCATAATTAATTCTGTAGGTGTAGAGTTGACAACATTAGTATGGTAGAATGATGGCTGTAAAATAGTGGCAAAATGGGTACATGCATGAAAAAGATCGATTCAATGTTTCTACTTCTCTGTGTGGGTTATGCGTAGAATTGAGGGTTCAACTGAATTGCCCAAACTCTATCCGGAAATCCTTCCAGATGGATCTGACGCCACATGCTGTGTTTGTTGCTTCCCATGTAGAACAAATGGCACTTGTTGCTGCTCACCTACTGCTGACCAACTTGTCTGTTTGTATCTGTGCTTTTTTTATCTCCGTGTGGAAATTAGCCTCTTGTTTTTTTATAGGAATCCCTCTTGTTAATTCAAGGTTGCTCGCAATAAAATAAGTACTGTAAGGTTGGTTCTATAATGTACTGAACCTGACAAATGACTTGTTTAGTACACTATTGTACTATTAGTGATTCAGTAGCTGAAAACTCAAGTCACCATAGTATCCTATGATAAGTTGATAACTACTTTGATTAACAGTTGATGTCAAACTTATCTACGTGGCTACGTTCATTTTTTATCCTTACCTTCAGGTGTATTTACCACAGTAATTTTGCTATGCATCTTTGTTCTTTTACAGCAGAGGTCTTTCATCTCCATTCAGTTCAGGTGTATTTACCATGGGTATTTTGCAATGCATCTCTTTTCTTTTACAGTAGAGGTCTTTCATCTCCATTCAGGAAGCGTAAAGGACACTTCTGCTCTGTGTTGCTATGCACTCTGTAGTTCTCCTAAATGGACAGTATGTCCCCTCAAGTGCATTTTATTGGCGGATGTAGAGCTCCTTTTATTGTAGTGGTCCTGTGTGGACATTTGATCAGGGCCACATCTAGGGAGGACATGCTGTGGGTTTTGCTGTTTTTGCACATGACAGCCTGGATGAAAGGGCTGCAATATACAAGAAAAACTGTCTTGTCTGCATTCAACTCCTTAAAACACTATTTTCACCATCAAGGTGCATTTTTCATGCATCGATAAAGGGATTGACAGGTTAACAGCATGCCGATTCATTCAGTTATCATCTAGTGTTTTTTTAACCTTTTGGGATGATAACTATCATCCAGTGGATTTAATTGTTCACCTTAAACTTTATAGCCTTGGTGTTCCCTTAATTGCATATTCTTTGAAATGTTTTCAAGAACTTACTCTTCTGTTGGTCATGTTCTACTGGCAAACAGGCATTTATGTTGGAGGAAGTAAAGTGGTTCATTTTACTCGAAAGAAAGAAGCAGAAGGATCAGATTCATCCAATTCCACCTCCAGCCTATTATTAGAGCCTTCATCAGAGTGCCCAACGTTCCCAGATTGTGGGTTTCAGCTGCCTGATAGTGGTGTCGTCCTCACCTGCTTGGATTGCTTCCTTCGGAATGGCTCTCTATACTGCTTCGAGTACGGAGTGCCATCAGCCGTTTTCCTTGCAAAGCTGCGTGGGGGAACCTGCACCATTGCCCAATCAGATCCATCAGAAGTTGTGGTACACAGAGCCATGTACTTACTTCAAAATGGCTTTGGAAATTATGACATATTTGAGAACAATTGCGAGGACTTTGCACTCTACTGCAAAACTGGGCTTCTTCCTGTTGAGGAACCTGGCATTGGAACAAGTGGGCAAGCATCTTCCGCCATTGGAGTGCCATTGGCAGCTCTTCTGTCCACTCCACTTAAGCTTTTTGCTGCTGGTCCACTTGGAATGGCCACTGTCACAGCTGGGATGTACTGTGCTGGTAGATACATCACTGACATAGGAGTAAGAAAGGATGTGGCGAAAATTGAAGTGGAGAATTTATCATCACACCTTGGTAGACGCCTGATTGAAGATGAAGGATCAGTGAACGTACGGTCAGAGAAACCGAAAACCTTGCTGCCTATGAAGAGAAAGCGTGAGAGGTGATGGCGACTATATACCGCTCTTCGTCGATAATTGGTTCAGAACTGTGCATAATTTAAACTTTACTCTTCGCCATAATAAGTTTGATATAGATATGTACCTCTGAAGCGTGTTCTGATTCAGTTAAGACCACACTTCACATGATCAATTGAGCTACATTCCAAACTGAATATGTGATGGAAATGTGATAATTGAATCGTTGGAGTCAAAAGTAGATACTTACTGTTCTTTGAATATGATACCTCACATTCTAGTGCTTTTATTTTCTGTTTATTTTCTTTTATCAATATTTTTTCTTACTGGTCACAATATAATGTAATAAGTTTCAGTAGTGGTGAAGACTTCTTTTGTATGGGCTGTTTTCTCTATGATGAAATCCATAGACTGAATAGT]
[+] EMBL AK072174 [TGCCATGGACGGGTAGAAAGGTACAGTGGCGGCGCCGACACGCGGTGGAGGAGGAGGCGGCGGCGGCGGCGGCGATGGGGCTGCTGTCGAACAGGGTGGAGCGGTCGGAGATCAGGCCGGGGGATCACATCTACACATGGAGGGCGGTGTACGCCTACTCCCACCACGGTACGCGCGCGCCCACCCCCTCCATCCTCTTCCTCCTCGGATGCCATCCCGGTTGCTTGAATTGTTGTCGCCACTCGCCAATGGTGGCGGCGGCGGCGGTTGCGGGTTTAGGTTTGGGAACTAATCCGGCGGCGGCTCTGTGGCTCTCCTCCTCCGGCGCTGCTTCGAATTTTCTCGTGCGATTGACGTCTGATCAATGGTTGTTGACTTGACCGGGAAATTCTGGCTCGGCGAGTCAACGGGGGATTTTTTTCCCCCTTTTTTTTGGTCTGTGCGGCTACTGGATCGGAAATTTCACTGCGATTGCTGGGTCAGGAACAAATGCGATCGAAATTGCCTAGTTGGACTGGAAATTTTGTTCGGCCGGCTCAATGGGGGGAACATTTGCGATCTGAATTTTCGAGTTGGGGTTGTCTCTTGCTTAGTTCATCGGTAACTGAAGGGCGTGTCTTCGTCTCAGTTTTCCATTCTGTCGGATTTGGGATTTCTTTCGCCTCATACTTCCTGCGTGATGTTCTCTTCTCGAGCAAACCCCTCTGCTTGAAGTACGGATCACGTGGTTGGTTGGACAAGTGCGTCAATCATCCAACTCTCTGATTGAGTGATTGTTCAGACTTTTAACTGTTTACAGATTCGTAGTAGAACTCAGCAGTAACACGCAAATCATCGTGCATTTGTACTATCTTCAGTTCATAATTAATTCTGTAGGTGTAGAGTTGACAACATTAGTATGGTAGAATGATGGCTGTAAAATAGTGGCAAAATGGGTACATGCATGAAAAAGATCGATTCAATGTTTCTACTTCTCTGTGTGGGTTATGCGTAGAATTGAGGGTTCAACTGAATTGCCCAAACTCTATCCGGAAATCCTTCCAGATGGATCTGACGCCACATGCTGTGTTTGTTGCTTCCCATGTAGAACAAATGGCACTTGTTGCTGCTCACCTACTGCTGACCAACTTGTCTGTTTGTATCTGTGCTTTTTTTATCTCCGTGTGGAAATTAGCCTCTTGTTTTTTTATAGGAATCCCTCTTGTTAATTCAAGGTTGCTCGCAATAAAATAAGTACTGTAAGGTTGGTTCTATAATGTACTGAACCTGACAAATGACTTGTTTAGTACACTATTGTACTATTAGTGATTCAGTAGCTGAAAACTCAAGTCACCATAGTATCCTATGATAAGTTGATAACTACTTTGATTAACAGTTGATGTCAAACTTATCTACGTGGCTACGTTCATTTTTTATCCTTACCTTCAGGTGTATTTACCACAGTAATTTTGCTATGCATCTTTGTTCTTTTACAGCAGAGGTCTTTCATCTCCATTCAGTTCAGGTGTATTTACCATGGGTATTTTGCAATGCATCTCTTTTCTTTTACAGTAGAGGTCTTTCATCTCCATTCAGGAAGCGTAAAGGACACTTCTGCTCTGTGTTGCTATGCACTCTGTAGTTCTCCTAAATGGACAGTATGTCCCCTCAAGTGCATTTTATTGGCGGATGTAGAGCTCCTTTTATTGTAGTGGTCCTGTGTGGACATTTGATCAGGGCCACATCTAGGGAGGACATGCTGTGGGTTTTGCTGTTTTTGCACATGACAGCCTGGATGAAAGGGCTGCAATATACAAGAAAAACTGTCTTGTCTGCATTCAACTCCTTAAAACACTATTTTCACCATCAAGGTGCATTTTTCATGCATCGATAAAGGGATTGACAGGTTAACAGCATGCCGATTCATTCAGTTATCATCTAGTGTTTTTTTAACCTTTTGGGATGATAACTATCATCCAGTGGATTTAATTGTTCACCTTAAACTTTATAGCCTTGGTGTTCCCTTAATTGCATATTCTTTGAAATGTTTTCAAGAACTTACTCTTCTGTTGGTCATGTTCTACTGGCAAACAGGCATTTATGTTGGAGGAAGTAAAGTGGTTCATTTTACTCGAAAGAAAGAAGCAGAAGGATCAGATTCATCCAATTCCACCTCCAGCCTATTATTAGAGCCTTCATCAGAGTGCCCAACGTTCCCAGATTGTGGGTTTCAGCTGCCTGATAGTGGTGTCGTCCTCACCTGCTTGGATTGCTTCCTTCGGAATGGCTCTCTATACTGCTTCGAGTACGGAGTGCCATCAGCCGTTTTCCTTGCAAAGCTGCGTGGGGGAACCTGCACCATTGCCCAATCAGATCCATCAGAAGTTGTGGTACACAGAGCCATGTACTTACTTCAAAATGGCTTTGGAAATTATGACATATTTGAGAACAATTGCGAGGACTTTGCACTCTACTGCAAAACTGGGCTTCTTCCTGTTGAGGAACCTGGCATTGGAACAAGTGGGCAAGCATCTTCCGCCATTGGAGTGCCATTGGCAGCTCTTCTGTCCACTCCACTTAAGCTTTTTGCTGCTGGTCCACTTGGAATGGCCACTGTCACAGCTGGGATGTACTGTGCTGGTAGATACATCACTGACATAGGAGTAAGAAAGGATGTGGCGAAAATTGAAGTGGAGAATTTATCATCACACCTTGGTAGACGCCTGATTGAAGATGAAGGATCAGTGAACGTACGGTCAGAGAAACCGAAAACCTTGCTGCCTATGAAGAGAAAGCGTGAGAGGTGATGGCGACTATATACCGCTCTTCGTCGATAATTGGTTCAGAACTGTGCATAATTTAAACTTTACTCTTCGCCATAATAAGTTTGATATAGATATGTACCTCTGAAGCGTGTTCTGATTCAGTTAAGACCACACTTCACATGATCAATTGAGCTACATTCCAAACTGAATATGTGATGGAAATGTGATAATTGAATCGTTGGAGTCAAAAGTAGATACTTACTGTTCTTTGAATATGATACCTCACATTCTAGTGCTTTTATTTTCTGTTTATTTTCTTTTATCAATATTTTTTCTTACTGGTCACAATATAATGTAATAAGTTTCAGTAGTGGTGAAGACTTCTTTTGTATGGGCTGTTTTCTCTATGATGAAATCCATAGACTGAATAGT]
[-] EMBL CB651545 [ TAGTGGTGTCGTCCTCACCTGCTTGGATTGCTTCCTTCGGAATGGCTCTCTATACTGCTTCGAGTACGGAGTGCCATCAGCCGTTTTCCTTGCAAAGCTGCGTGGGGGAACCTGCACCATTGCCCAATCAGATCCATCAGAAGTTGTGGTACACAGAGCCATGTACTTACTTCAAAATGGCTTTGGAAATTATGACATATTTGAGAACAATTGCGAGGACTTTGCACTCTACTGCAAAACTGGGCTTCTTCCTGTTGAGGAACCTGGCATTGGAACAAGTGGGCAAGCATCTTCCGCCATTGGAGTGCCATTGGCAGCTCTTCTGTCCACTCCACTTAAGCTTTTTGCTGCTGGTCCACTTGGAATGGCCACTGTCACAGCTGGGATGTACTGTGCTGGTAGATACATCACTGACATAGGAGTAAGAAAGGATGTGGCGAAAATTGAAGTGGAGAATTTATCATCACACCTTGGTAGACGCCTGATTGAAGATGAAGGATCAGTGAACGTACGGTCAGAGAAACCGAAAACCTTGCTGCCTATGAAGAGAAAGCGTGAGAGGTGATGGCGACTATATACCGCTCTTCGTCGATAATTGGTTCAGAACTGTGCATAATTTAAACTTTACTCTTCGCCATAATAAGTTTGATATAGATATGTACCTCTGAAGCGTGTTCTGATTCAGTTAAGACCACACTTCACATGATCAATTGAGCTACATTCCAAACTGAATATGTGATGGAAATGTGATAATTGAATCGTTGGAGT ]
consensusID : consensus_11798#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1158 fasta sequence
[GCTCTCGCTCGCGCACATCACATGCGCCTCCTCCCGTTATAAGGAGAGCCCCGCGCCATTGGCCGCCCCACTCACCCTGCCATGGACGGGTAGAAAGGTACAGTGGCGGCGCCGACACGCGGTGGAGGAGGAGGCGGCGGCGGCGGCGGCGATGGGGCTGCTGTCGAACAGGGTGGAGCGGTCGGAGATCAGGCCGGGGGATCACATCTACACATGGAGGGCGGTGTACGCCTACTCCCACCACGGCATTTATGTTGGAGGAAGTAAAGTGGTTCATTTTACTCGAAAGAAAGAAGCAGAAGGATCAGATTCATCCAATTCCACCTCCAGCCTATTATTAGAGCCTTCATCAGAGTGCCCAACGTTCCCAGATTGTGGGTTTCAGCTGCCTGATAGTGGTGTCGTCCTCACCTGCTTGGATTGCTTCCTTCGGAA-TGGCTCTCTATA-CTGCTTCGAGTA-CGGAGTG-CCAT-CAGCCGTTTT-CCTTGCAAAGCTGCGTGGGGGAACCTGCACCATTGCCCAATCAGATCCATCAGAAGTTGTGGTACACAGAGCCATGTACTTACTTCAAAATGGCTTTGGAAATTATGACATATTTGAGAACAATTGCGAGGACTTTGCACTCTACTGCAAAACTGGGCTTCTTCCTGTTGAGGAACCTGGCATTGGAACAAGTGGGCAAGCATCTTCCGCCATTGGAGTGCCATTGGCAGCTCTTCTGTCCACTCCACTTAAGCTTTTTGCTGCTGGTCCACTTGGAATGGCCACTGTCACAGCTGGGATGTACTGTGCTGGTAGATACATCACTGACATAGGAGTAAGAAAGGATGTGGCGAAAATTGAAGTGGAGAATTTATCATCACACCTTGGTAGACGCCTGATTGAAGATGAAGGATCAGTGAACGTACGGTCAGAGAAACCGAAAACCTTGCTGCCTATGAAGAGAAAGCGTGAGAGGTGATGGCGACTATATACCGCTCTTCGTCGATAATTGGTTCAGAACTGTGCATAATTTAAACTTTACTCTTCGCCATAATAAGTTTGATATAGATATGTACCTCTGAAGCGTGTTCTGATTCAGTTAAGACCACACTTCACATGATCAATTGAGCTACATTCCAAACTGAATATGTGATGGAAATGTGATAATTGAATCGTTGG]
[+] EMBL OSC107551 [GCTCTCGCTCGCGCACATCACATGCGCCTCCTCCCGTTATAAGGAGAGCCCCGCGCCATTGGCCGCCCCACTCACCCTGCCATGGACGGGTAGAAAGGTACAGTGGCGGTGCCGACACGCGGTGGAGGAGGAGGCGGCGGCGGCGGCGGCGATGGGGCTGCTGTCGAACAGGGTGGAGCGGTCGGAGATCAGGCCGGGGGATCACATCTACACATGGAGGGCGGTGTACGCCTACTCCCACCACGGCATTTATGTTGGAGGAAGTAAAGTGGTTCATTTTACTCGAAAGAAAGAAGCAGAAGGATCAGATTCATCCAATTCCACCTNCAGCCTATTATTAGAGCCTTCATCAGAG ]
[+] EMBL AK105121 [ GCCATGGACGGGTAGAAAGGTACAGTGGCGGCGCCGACACGCGGTGGAGGAGGAGGCGGCGGCGGCGGCGGCGATGGGGCTGCTGTCGAACAGGGTGGAGCGGTCGGAGATCAGGCCGGGGGATCACATCTACACATGGAGGGCGGTGTACGCCTACTCCCACCACGGCATTTATGTTGGAGGAAGTAAAGTGGTTCATTTTACTCGAAAGAAAGAAGCAGAAGGATCAGATTCATCCAATTCCACCTCCAGCCTATTATTAGAGCCTTCATCAGAGTGCCCAACGTTCCCAGATTGTGGGTTTCAGCTGCCTGATAGTGGTGTCGTCCTCACCTGCTTGGATTGCTTCCTTCGGAA TGGCTCTCTATA CTGCTTCGAGTA CGGAGTG CCAT CAGCCGTTTT CCTTGCAAAGCTGCGTGGGGGAACCTGCACCATTGCCCAATCAGATCCATCAGAAGTTGTGGTACACAGAGCCATGTACTTACTTCAAAATGGCTTTGGAAATTATGACATATTTGAGAACAATTGCGAGGACTTTGCACTCTACTGCAAAACTGGGCTTCTTCCTGTTGAGGAACCTGGCATTGGAACAAGTGGGCAAGCATCTTCCGCCATTGGAGTGCCATTGGCAGCTCTTCTGTCCACTCCACTTAAGCTTTTTGCTGCTGGTCCACTTGGAATGGCCACTGTCACAGCTGGGATGTACTGTGCTGGTAGATACATCACTGACATAGGAGTAAGAAAGGATGTGGCGAAAATTGAAGTGGAGAATTTATCATCACACCTTGGTAGACGCCTGATTGAAGATGAAGGATCAGTGAACGTACGGTCAGAGAAACCGAAAACCTTGCTGCCTATGAAGAGAAAGCGTGAGAGGTGATGGCGACTATATACCGCTCTTCGTCGATAATTGGTTCAGAACTGTGCATAATTTAAACTTTACTCTTCGCCATAATAAGTTTGATATAGATATGTACCTCTGAAGCGTGTTCTGATTCAGTTAAGACCACACTTCACATGATCAATTGAGCTACATTCCAAACTGAATATGTGATGGAAATGTGATAATTGAATCGTTGG]
[+] EMBL AK060048 [ TGGACGGGTAGAAAGGTACAGTGGCGGCGCCGACACGCGGTGGAGGAGGAGGCGGCGGCGGCGGCGGCGATGGGGCTGCTGTCGAACAGGGTGGAGCGGTCGGAGATCAGGCCGGGGGATCACATCTACACATGGAGGGCGGTGTACGCCTACTCCCACCACGGCATTTATGTTGGAGGAAGTAAAGTGGTTCATTTTACTCGAAAGAAAGAAGCAGAAGGATCAGATTCATCCAATTCCACCTCCAGCCTATTATTAGAGCCTTCATCAGAGTGCCCAACGTTCCCAGATTGTGGGTTTCAGCTGCCTGATAGTGGTGTCGTCCTCACCTGCTTGGATTGCTTCCTTCGGAA TGGCTCTCTATA CTGCTTCGAGTA CGGAGTG CCAT CAGCCGTTTT CCTTGCAAAGCTGCGTGGGGGAACCTGCACCATTGCCCAATCAGATCCATCAGAAGTTGTGGTACACAGAGCCATGTACTTACTTCAAAATGGCTTTGGAAATTATGACATATTTGAGAACAATTGCGAGGACTTTGCACTCTACTGCAAAACTGGGCTTCTTCCTGTTGAGGAACCTGGCATTGGAACAAGTGGGCAAGCATCTTCCGCCATTGGAGTGCCATTGGCAGCTCTTCTGTCCACTCCACTTAAGCTTTTTGCTGCTGGTCCACTTGGAATGGCCACTGTCACAGCTGGGATGTACTGTGCTGGTAGATACATCACTGACATAGGAGTAAGAAAGGATGTGGCGAAAATTGAAGTGGAGAATTTATCATCACACCTTGGTAGACGCCTGATTGAAGATGAAGGATCAGTGAACGTACGGTCAGAGAAACCGAAAACCTTGCTGCCTATGAAGAGAAAGCGTGAGAGGTGATGGCGACTATATACCGCTCTTCGTCGATAATTGGTTCAGAACTGTGCATAATTTAAACTTTACTCTTCGCCATAATAAGTTTGATATAGATATGTACCTCTGAAGCGTGTTCTGATTCAGTTAAGACCACACTTCACATGATCAATTGA ]
[+] EMBL CB651544 [ AGGTACAGTGGCGGCGCCGACACGCGGTGGAGGAGGAGGCGGCGGCGGCGGCGGCGATGGGGCTGCTGTCGAACAGGGTGGAGCGGTCGGAGATCAGGCCGGGGGATCACATCTACACATGGAGGGCGGTGTACGCCTACTCCCACCACGGCATTTATGTTGGAGGAAGTAAAGTGGTTCATTTTACTCGAAAGAAAGAAGCAGAAGGATCAGATTCATCCAATTCCACCTCCAGCCTATTATTAGAGCCTTCATCAGAGTGCCCAACGTTCCCAGATTGTGGGTTTCAGCTGCCTGATAGTGGTGTCGTCCTCACCTGCTTGGATTGCTTCCTTCGGAA TGGCTCTCTATA CTGCTTCGAGTA CGGAGTG CCAT CAGCCGTTTT CCTTGCAAAGCTGCGTGGGGGAACCTGCACCATTGCCCAATCAGATCCATCAGAAGTTGTGGTACACAGAGCCATGTACTTACTTCAAAATGGCTTTGGAAATTATGACATATTTGAGAACAATTGCGAGGACTTTGCACTCTACTGCAAAACTGGGCTTCTTCCTGTTGAGGAACCTGGCATTGGAACAAGTGGGCAAGCATCTTCCGCCATTGGAGTGCCATTGGCAGCTCTTCTGTCCACTCCACTTAAGCTTTTTGCTGCTGGTCCACTTGGAATGGCCACTGTCACAGCTGGGATGTACTGTGCTGGTAGATACATCACTGACATAGGAGTAAGAAAGGATGTGGCGAATATTGAAGTGGAGAATTTATCATCACA ]
[+] EMBL OSAA31817 [ agtGGCGGCGATGGGGCTGCTGTCGAACAGGGTGGAGCGGTCGGAGATCAGGCCGGGGGATCACATCTACACATGGAGGGCGGTGTACG CTACTCCCACCACGGCATTTATGTTGGAGGAAGTAAAGTGGTTCATTTTACTCGAAAGAAAGAAGCAGAAGGATCAGATTCATCCAATTCCACCTCCAGCCTATTATTAGAGCCTTCATCAGAGTGCCCAACGTTCCCAGATTGT GGTTTCAGCT ]
[+] EMBL AU092111 [ CGGAATTGGCTCTCTATACCTGCTTCGAGTACCGGAGTGCCCATNCAGCCGTTTTCCCTTGCAAAGCTGCGTGGGGGANCCTGCACCATTGCCCAATCAGATCCATCAGAAGTTGTGGTACACAGAGCCATGTACTTACTTCAAAATGGCTTTGGAAATTATGACATATTTGAGAACAATTGCGAGGACTTTGCACTCTACTGCAAAACTGGGCTTCTTCCTGTTGAGGAACCTGGCATTGGAACAAGTGGGCAAGCATCTTCCGCCATTGGAGTGCCATTGGCAGCTCTTCTGTCCACTCCACTTAAGCTTTTTGCTGCTGGTCCACTTGGAATGGCCACTGTCACAGCTGGGATGTACTGTGCTGGTAGATACATCACTGACATAGGAGTAAGAAAGGATGTGGCGAAAATTGAAGTGGAGAATTTATCATCACACCTTGGTAGACGCCTGATTGAAGATGAAGGATCAGTGAACGTACGGTCAGAGAAACCGAAAACCTTGCTGCCTATGAAGAGAAAGCGTGAGAGGTGATGGCGACTATATACCGCTCTTCGTCGATAATTGGTTCAGAACTGTGCATAATTTAAACTTTACTCTTCGCCATAATAAGTTTGATATAGATATGTACCTCTGAAGCGTGTTCTGATTCAGTTAAGACCACACTTCACATGATCAATTGAGCTACATTCCAAAaaaaa ]
[-] EMBL OSAA31659 [ TGTGCTGGTAGATACATCACTGACATAGGAGTAAGAAAGGATGTGGCGAAAATTGAAGTGGAGAATTTATCATCACACCTTGGTAGACGCCTGATTGAAGATGAAGGATCAGTGAACGTACGGTCAGAGAAACCGAAAACCTTGCTGCCTATGAAGAGAAAGCGTGAGAGGTGATGGCGACTATATACCGCCCTTCGTCGATAATTGGTTCAGAACTGTGCATAATTTAAACTTTACTCTTCGCCATAATAAGTTTGATATAGATATGTACCTCTGAAGCGTGTTCTGATTCAGTTAAGACCACACTTCACATGAT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11798#0 TGCCATGGACGGGTAGAAAGGTACAGTGGCGGCGCCGACACGCGGTGGAGGAGGAGGCGG 60
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 CGGCGGCGGCGGCGATGGGGCTGCTGTCGAACAGGGTGGAGCGGTCGGAGATCAGGCCGG 120
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 GGGATCACATCTACACATGGAGGGCGGTGTACGCCTACTCCCACCACGGTACGCGCGCGC 180
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 CCACCCCCTCCATCCTCTTCCTCCTCGGATGCCATCCCGGTTGCTTGAATTGTTGTCGCC 240
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 ACTCGCCAATGGTGGCGGCGGCGGCGGTTGCGGGTTTAGGTTTGGGAACTAATCCGGCGG 300
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 CGGCTCTGTGGCTCTCCTCCTCCGGCGCTGCTTCGAATTTTCTCGTGCGATTGACGTCTG 360
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 ATCAATGGTTGTTGACTTGACCGGGAAATTCTGGCTCGGCGAGTCAACGGGGGATTTTTT 420
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 TCCCCCTTTTTTTTGGTCTGTGCGGCTACTGGATCGGAAATTTCACTGCGATTGCTGGGT 480
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 CAGGAACAAATGCGATCGAAATTGCCTAGTTGGACTGGAAATTTTGTTCGGCCGGCTCAA 540
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 TGGGGGGAACATTTGCGATCTGAATTTTCGAGTTGGGGTTGTCTCTTGCTTAGTTCATCG 600
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 GTAACTGAAGGGCGTGTCTTCGTCTCAGTTTTCCATTCTGTCGGATTTGGGATTTCTTTC 660
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 GCCTCATACTTCCTGCGTGATGTTCTCTTCTCGAGCAAACCCCTCTGCTTGAAGTACGGA 720
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 TCACGTGGTTGGTTGGACAAGTGCGTCAATCATCCAACTCTCTGATTGAGTGATTGTTCA 780
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 GACTTTTAACTGTTTACAGATTCGTAGTAGAACTCAGCAGTAACACGCAAATCATCGTGC 840
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 ATTTGTACTATCTTCAGTTCATAATTAATTCTGTAGGTGTAGAGTTGACAACATTAGTAT 900
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 GGTAGAATGATGGCTGTAAAATAGTGGCAAAATGGGTACATGCATGAAAAAGATCGATTC 960
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 AATGTTTCTACTTCTCTGTGTGGGTTATGCGTAGAATTGAGGGTTCAACTGAATTGCCCA 1020
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 AACTCTATCCGGAAATCCTTCCAGATGGATCTGACGCCACATGCTGTGTTTGTTGCTTCC 1080
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 CATGTAGAACAAATGGCACTTGTTGCTGCTCACCTACTGCTGACCAACTTGTCTGTTTGT 1140
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 ATCTGTGCTTTTTTTATCTCCGTGTGGAAATTAGCCTCTTGTTTTTTTATAGGAATCCCT 1200
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 CTTGTTAATTCAAGGTTGCTCGCAATAAAATAAGTACTGTAAGGTTGGTTCTATAATGTA 1260
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 CTGAACCTGACAAATGACTTGTTTAGTACACTATTGTACTATTAGTGATTCAGTAGCTGA 1320
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 AAACTCAAGTCACCATAGTATCCTATGATAAGTTGATAACTACTTTGATTAACAGTTGAT 1380
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 GTCAAACTTATCTACGTGGCTACGTTCATTTTTTATCCTTACCTTCAGGTGTATTTACCA 1440
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 CAGTAATTTTGCTATGCATCTTTGTTCTTTTACAGCAGAGGTCTTTCATCTCCATTCAGT 1500
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 TCAGGTGTATTTACCATGGGTATTTTGCAATGCATCTCTTTTCTTTTACAGTAGAGGTCT 1560
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 TTCATCTCCATTCAGGAAGCGTAAAGGACACTTCTGCTCTGTGTTGCTATGCACTCTGTA 1620
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 GTTCTCCTAAATGGACAGTATGTCCCCTCAAGTGCATTTTATTGGCGGATGTAGAGCTCC 1680
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 TTTTATTGTAGTGGTCCTGTGTGGACATTTGATCAGGGCCACATCTAGGGAGGACATGCT 1740
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 GTGGGTTTTGCTGTTTTTGCACATGACAGCCTGGATGAAAGGGCTGCAATATACAAGAAA 1800
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 AACTGTCTTGTCTGCATTCAACTCCTTAAAACACTATTTTCACCATCAAGGTGCATTTTT 1860
consensus_11798#1 ------------------------------GCTCT-CGCTCGCGCACATCACATGCGCCT 29
* ** ** * ** *
consensus_11798#0 CATGCATCGATAAAGGGATTGACAGGTTAACAGCATGCCGATTCATTCAGTTATCATCTA 1920
consensus_11798#1 CCTCCCGTTATAAGGAGAGCCCCGCGCCATTGGCCGCCCCACTCACCCTGCCATGGACGG 89
* * * **** * ** * * * ** ** * *** * * ** *
consensus_11798#0 GTGTTTTTTTAACCTTTTGGGATGATAACTATCATCCAGTGGATTT--AATTGTTCACCT 1978
consensus_11798#1 GTA-----GAAAGGTACAGTGGCGGCG-CCGACACGCGGTGGAGGAGGAGGCGGCGGCGG 143
** ** * * * * * ** * ***** * * *
consensus_11798#0 TAAACTTTATAGCCTTGGTGTTCCCTTAATTGCATATTCTTTGAAATGTTTTCAAGAACT 2038
consensus_11798#1 CGGCGGCGATGGGGCTGCTGTCGAACAGGGTGGA-GCGGTCGGAGATCAGGCCGGGGGAT 202
** * ** *** ** * * ** ** * * *
consensus_11798#0 TACTCTTCTGTT-----GGTCATGT---TCTACTGGCAAACAGGCATTTATGTTGGAGGA 2090
consensus_11798#1 CACATCTACACATGGAGGGCGGTGTACGCCTACTCCCACCACGGCATTTATGTTGGAGGA 262
** * ** *** ***** ** ******************
consensus_11798#0 AGTAAAGTGGTTCATTTTACTCGAAAGAAAGAAGCAGAAGGATCAGATTCATCCAATTCC 2150
consensus_11798#1 AGTAAAGTGGTTCATTTTACTCGAAAGAAAGAAGCAGAAGGATCAGATTCATCCAATTCC 322
************************************************************
consensus_11798#0 ACCTCCAGCCTATTATTAGAGCCTTCATCAGAGTGCCCAACGTTCCCAGATTGTGGGTTT 2210
consensus_11798#1 ACCTCCAGCCTATTATTAGAGCCTTCATCAGAGTGCCCAACGTTCCCAGATTGTGGGTTT 382
************************************************************
consensus_11798#0 CAGCTGCCTGATAGTGGTGTCGTCCTCACCTGCTTGGATTGCTTCCTTCGGAATGGCTCT 2270
consensus_11798#1 CAGCTGCCTGATAGTGGTGTCGTCCTCACCTGCTTGGATTGCTTCCTTCGGAATGGCTCT 442
************************************************************
consensus_11798#0 CTATACTGCTTCGAGTACGGAGTGCCATCAGCCGTTTTCCTTGCAAAGCTGCGTGGGGGA 2330
consensus_11798#1 CTATACTGCTTCGAGTACGGAGTGCCATCAGCCGTTTTCCTTGCAAAGCTGCGTGGGGGA 502
************************************************************
consensus_11798#0 ACCTGCACCATTGCCCAATCAGATCCATCAGAAGTTGTGGTACACAGAGCCATGTACTTA 2390
consensus_11798#1 ACCTGCACCATTGCCCAATCAGATCCATCAGAAGTTGTGGTACACAGAGCCATGTACTTA 562
************************************************************
consensus_11798#0 CTTCAAAATGGCTTTGGAAATTATGACATATTTGAGAACAATTGCGAGGACTTTGCACTC 2450
consensus_11798#1 CTTCAAAATGGCTTTGGAAATTATGACATATTTGAGAACAATTGCGAGGACTTTGCACTC 622
************************************************************
consensus_11798#0 TACTGCAAAACTGGGCTTCTTCCTGTTGAGGAACCTGGCATTGGAACAAGTGGGCAAGCA 2510
consensus_11798#1 TACTGCAAAACTGGGCTTCTTCCTGTTGAGGAACCTGGCATTGGAACAAGTGGGCAAGCA 682
************************************************************
consensus_11798#0 TCTTCCGCCATTGGAGTGCCATTGGCAGCTCTTCTGTCCACTCCACTTAAGCTTTTTGCT 2570
consensus_11798#1 TCTTCCGCCATTGGAGTGCCATTGGCAGCTCTTCTGTCCACTCCACTTAAGCTTTTTGCT 742
************************************************************
consensus_11798#0 GCTGGTCCACTTGGAATGGCCACTGTCACAGCTGGGATGTACTGTGCTGGTAGATACATC 2630
consensus_11798#1 GCTGGTCCACTTGGAATGGCCACTGTCACAGCTGGGATGTACTGTGCTGGTAGATACATC 802
************************************************************
consensus_11798#0 ACTGACATAGGAGTAAGAAAGGATGTGGCGAAAATTGAAGTGGAGAATTTATCATCACAC 2690
consensus_11798#1 ACTGACATAGGAGTAAGAAAGGATGTGGCGAAAATTGAAGTGGAGAATTTATCATCACAC 862
************************************************************
consensus_11798#0 CTTGGTAGACGCCTGATTGAAGATGAAGGATCAGTGAACGTACGGTCAGAGAAACCGAAA 2750
consensus_11798#1 CTTGGTAGACGCCTGATTGAAGATGAAGGATCAGTGAACGTACGGTCAGAGAAACCGAAA 922
************************************************************
consensus_11798#0 ACCTTGCTGCCTATGAAGAGAAAGCGTGAGAGGTGATGGCGACTATATACCGCTCTTCGT 2810
consensus_11798#1 ACCTTGCTGCCTATGAAGAGAAAGCGTGAGAGGTGATGGCGACTATATACCGCTCTTCGT 982
************************************************************
consensus_11798#0 CGATAATTGGTTCAGAACTGTGCATAATTTAAACTTTACTCTTCGCCATAATAAGTTTGA 2870
consensus_11798#1 CGATAATTGGTTCAGAACTGTGCATAATTTAAACTTTACTCTTCGCCATAATAAGTTTGA 1042
************************************************************
consensus_11798#0 TATAGATATGTACCTCTGAAGCGTGTTCTGATTCAGTTAAGACCACACTTCACATGATCA 2930
consensus_11798#1 TATAGATATGTACCTCTGAAGCGTGTTCTGATTCAGTTAAGACCACACTTCACATGATCA 1102
************************************************************
consensus_11798#0 ATTGAGCTACATTCCAAACTGAATATGTGATGGAAATGTGATAATTGAATCGTTGGAGTC 2990
consensus_11798#1 ATTGAGCTACATTCCAAACTGAATATGTGATGGAAATGTGATAATTGAATCGTTGG---- 1158
********************************************************
consensus_11798#0 AAAAGTAGATACTTACTGTTCTTTGAATATGATACCTCACATTCTAGTGCTTTTATTTTC 3050
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 TGTTTATTTTCTTTTATCAATATTTTTTCTTACTGGTCACAATATAATGTAATAAGTTTC 3110
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 AGTAGTGGTGAAGACTTCTTTTGTATGGGCTGTTTTCTCTATGATGAAATCCATAGACTG 3170
consensus_11798#1 ------------------------------------------------------------
consensus_11798#0 AATAGT 3176
consensus_11798#1 ------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||