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Oryza sativa
cluster # 11811 cluster # 11811       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11811#0 length = 1590 sequences # 8  
consensus_11811#1 length = 431 sequences # 1  

consensusID : consensus_11811#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1590
fasta sequence
                              [TCTGACTTCCCTACGTTCTCCTCTCTCTCTCGGCTTCCACTCCCGTCTCCTCGTCTCCTCGCGTGTTCGCCCGCCGCCCTGCGCCGACCAGCGCAGCCGCAGCGGCGCCGGCGTCCTGCTGCTTCCGCCCGCATCCTCGCCGGTAAGAGGCAGAATCACTTCGTTAGGCAAGGATGAGCAAAGGCCCAGCTCCGTTCCTCAACATTGGGAAGAGAGCAAAAGATCTTTTGTACAAGGACTACAATTTTGACCAAAAGTTTTCTTTAACGACAACTAGCAATTCTGGTTTGGGTCTAACAGCCACCGGTGTGAAGATAGACGAACTC-TTCATCGGTGACATACAGACACAACATAAAAGT-GGCAAAACCAC-TGTTGATGTCAAGATT-GATAG-TGAATCTA-GAGTGTCAACCACAGTCACTG-TTGAT-GAAGCCCTTACT-GGTC-TGAAGAC-TTCTTTTA-GC-TTCA-GGGTTCCT-GA-TCAAAAGT-CCGGGAA-GCTT-GA-TTTGCAATACCTTCATGACCATTTTGCACTGAATTCTACCATTGGTTTGACATCAACGCCTTTAATTGAGCTGGCAGCAACTATCGGCACGAATGAACTTAGTGCTGGTGCTGAGGTTGGATTCGACAGCACTTCAGCTTCTGTTACTAAGTACAACTCAGGGATCTGCTATAACAAACATGATTTTTCTGCTGCCGTACTATTGGCTGATAAAGGGGAGACTTTAAAAGCTTCTTATATCCACACGTTCAATGAAACCAATGGAGCTACAGTGGCGGCTGAAGTAACGCACAAGTTAAAAACAAAAGAGAACTATTTCACCATCGGGAGCTCTCATGCTATTGATTCTTCGACGTTGCTGAAGACAAGATTTAGCAATGGTGGCAAAGTTGGAGTTCTCTGTCAGCATGAGTGGAGGCCCAAGTCTACTGTAAGTATTTCTGCCGAGTATGATCCCAAAGTGGTGAGTTCGCCTTCAAGATTCGGCGTGGCCATAGCCTTGAAGCCTTGATTATCACCTCCTGTACAAGTGTTAGATACTTCTTGCCCGTGTGCATCCTAGCCATACTTACGAAAGCTCCACCATTTTATGCCCGTTTTGTAAGTGTCTTGGCCGAAGAAACGTTGTTGTCTTGGAGTTGGTCTTAGTTTTGTGGAACCCTACCACCAGCCGACTTCATCCCGAGAATTGAAAATACAGAGAGTTTTGTACTGGAAACAATAGATTTACTGTTTTGCTGCTTCAGAAACTATTCGGTGTCGATTGTACA-CCTTGAAGAGCCCCCCTTGAAGAAGAATATCAGGGTAAGTGACTAAGTGCCACGTTGGTTTGTTGCTGAGCCAAATGGGAGTTGGAAATGATTCGATATCTGCATTATTCTGTGATGCAGTTTTGGTTGGCTTGTTGCTGAGCCAAATGGGAGTTAGAAATGATTTGATATCTGTTTTTTTATGCAGTTTTGGCATGCTGATGT-GCCCTTTTTTTTCAATTGTTTGCAGTGTACCATATGGTCATTTCAATTGTTTCAAGAGAGTACACTATTTAGACATTGTACTAACAATGTTTTGTTCTGATGCTCATCACCGCTAAATATAGT]

[+] EMBL AK100231             [TCTGACTTCCCTACGTTCTCCTCTCTCTCTCGGCTTCCACTCCCGTCTCCTCGTCTCCTCGCGTGTTCGCCCGCCGCCCTGCGCCGACCAGCGCAGCCGCAGCGGCGCCGGCGTCCTGCTGCTTCCGCCCGCATCCTCGCCGGTAAGAGGCAGAATCACTTCGTTAGGCAAGGATGAGCAAAGGCCCAGCTCCGTTCCTCAACATTGGGAAGAGAGCAAAAGATCTTTTGTACAAGGACTACAATTTTGACCAAAAGTTTTCTTTAACGACAACTAGCAATTCTGGTTTGGGTCTAACAGCCACCGGTGTGAAGATAGACGAACTC TTCATCGGTGACATACAGACACAACATAAAAGT GGCAAAACCAC TGTTGATGTCAAGATT GATAG TGAATCTA GAGTGTCAACCACAGTCACTG TTGAT GAAGCCCTTACT GGTC TGAAGAC TTCTTTTA GC TTCA GGGTTCCT GA TCAAAAGT CCGGGAA GCTT GA TTTGCAATACCTTCATGACCATTTTGCACTGAATTCTACCATTGGTTTGACATCAACGCCTTTAATTGAGCTGGCAGCAACTATCGGCACGAATGAACTTAGTGCTGGTGCTGAGGTTGGATTCGACAGCACTTCAGCTTCTGTTACTAAGTACAACTCAGGGATCTGCTATAACAAACATGATTTTTCTGCTGCCGTACTATTGGCTGATAAAGGGGAGACTTTAAAAGCTTCTTATATCCACACGTTCAATGAAACCAATGGAGCTACAGTGGCGGCTGAAGTAACGCACAAGTTAAAAACAAAAGAGAACTATTTCACCATCGGGAGCTCTCATGCTATTGATTCTTCGACGTTGCTGAAGACAAGATTTAGCAATGGTGGCAAAGTTGGAGTTCTCTGTCAGCATGAGTGGAGGCCCAAGTCTACTGTAAGTATTTCTGCCGAGTATGATCCCAAAGTGGTGAGTTCGCCTTCAAGATTCGGCGTGG CATAGCCTTGAAGCCTTGATTATCACCTCCTGTACAAGTGTTAGATACTTCTTGCCCGTGTGCATCCTAGCCATACTTACGAAAGCTCCACCATTTTATGCCCGTTTTGTAAGTGTCTTGGCCGAAGAAACGTTGTTGTCTTGGAGTTGGTCTTAGTTTTGTGGAACCCTACCACCAGCCGACTTCATCCCGAGAATTGAAAATACAGAGAGTTTTGTACTGGAAACAATAGATTTACTGTTTTGCTGCTTCAGAAACTATTCGGTGTCGATTGTACA CCTTGAAGAGCCCCCCTTGAAGAAGAATATCAGGGTAAGTGACTAAGTGCCACGTTGGTTTGTTGCTGAGCCAAATGGGAGTTGGAAATGATTCGATATCTGCATTATTCTGTGATGCAGTTTTGGTTGGCTTGTTGCTGAGCCAAATGGGAGTTAGAAATGATTTGATATCTGTTTTTTTATGCAGTTTTGGCATGCTGATGT GCCCTTTTTTTTCAATTGTTTGCAGTGTACCATATGGTCATTTCAATTGTTTCAAGAGAGTACACTATTTAGACATTGTACTAACAATGTTTTGTTCTGATGCTCATCACCGCTAAATATAGT]
[+] EMBL AK073584             [                                                 CTCGTCTCCTCGCGTGTTCGCCCGCCGCCCTGCGCCGACCAGCGCAGCCGCAGCGGCGCCGGCGTCCTGCTGCTTCCGCCCGCATCCTCGCCGGTAAGAGGCAGAATCACTTCGTTAGGCAAGGATGAGCAAAGGCCCAGCTCCGTTCCTCAACATTGGGAAGAGAGCAAAAGATCTTTTGTACAAGGACTACAATTTTGACCAAAAGTTTTCTTTAACGACAACTAGCAATTCTGGTTTGGGTCTAACAGCCACCGGTGTGAAGATAGACGAACTC TTCATCGGTGACATACAGACACAACATAAAAGT GGCAAAACCAC TGTTGATGTCAAGATT GATAG TGAATCTA GAGTGTCAACCACAGTCACTG TTGAT GAAGCCCTTACT GGTC TGAAGAC TTCTTTTA GC TTCA GGGTTCCT GA TCAAAAGT CCGGGAA GCTT GA TTTGCAATACCTTCATGACCATTTTGCACTGAATTCTACCATTGGTTTGACATCAACGCCTTTAATTGAGCTGGCAGCAACTATCGGCACGAATGAACTTAGTGCTGGTGCTGAGGTTGGATTCGACAGCACTTCAGCTTCTGTTACTAAGTACAACTCAGGGATCTGCTATAACAAACATGATTTTTCTGCTGCCGTACTATTGGCTGATAAAGGGGAGACTTTAAAAGCTTCTTATATCCACACGTTCAATGAAACCAATGGAGCTACAGTGGCGGCTGAAGTAACGCACAAGTTAAAAACAAAAGAGAACTATTTCACCATCGGGAGCTCTCATGCTATTGATTCTTCGACGTTGCTGAAGACAAGATTTAGCAATGGTGGCAAAGTTGGAGTTCTCTGTCAGCATGAGTGGAGGCCCAAGTCTACTGTAAGTATTTCTGCCGAGTATGATCCCAAAGTGGTGAGATCGCCTTCAAGATTCGGCGTGGCCATAGCCTTGAAGCCTTGATTATCACCTCCTGTACAAGTGTTAGATACTTCTTGCCCGTGTGCATCCTAGCCATACTTACGAAAGCTCCACCATTTTATGCCCGTTTTGTAAGTGTCTTGGCCGAAGAAACGTTGTTGTCTTGGAGTTGGTCTTAGTTTTGTGGAACCCTACCACCAGCCGACTTCATCCCGAGAATTGAAAATACAGAGAGTTTTGTACTGGAAACAATAGATTTACTGTTTTGCTGCTTCAGAAACTATTCGGTGTCGATTGTACA CCTTGAAGA                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK060148             [                                                          TCGCGTGTTCGCCCGCCGCCCTGCGCCGACCAGCGCAGCCGCAGCGGCGCCGGCGTCCTGCTGCTTCCGCCCGCATCCTCGCCGGTAAGAGGCAGAATCACTTCGTTAGGCAAGGATGAGCAAAGGCCCAGCTCCGTTCCTCAACATTGGGAAGAGAGCAAAAGATCTTTTGTACAAGGACTACAATTTTGACCAAAAGTTTTCTTTAACGACAACTAGCAATTCTGGTTTGGGTCTAACAGCCACCGGTGTGAAGATAGACGAACTC TTCATCGGTGACATACAGACACAACATAAAAGT GGCAAAACCAC TGTTGATGTCAAGATT GATAG TGAATCTA GAGTGTCAACCACAGTCACTG TTGAT GAAGCCCTTACT GGTC TGAAGAC TTCTTTTA GC TTCA GGGTTCCT GA TCAAAAGT CCGGGAA GCTT GA TTTGCAATACCTTCATGACCATTTTGCACTGAATTCTACCATTGGTTTGACATCAACGCCTTTAATTGAGCTGGCAGCAACTATCGGCACGAATGAACTTAGTGCTGGTGCTGAGGTTGGATTCGACAGCACTTCAGCTTCTGTTACTAAGTACAACTCAGGGATCTGCTATAACAAACATGATTTTTCTGCTGCCGTACTATTGGCTGATAAAGGGGAGACTTTAAAAGCTTCTTATATCCACACGTTCAATGAAACCAATGGAGCTACAGTGGCGGCTGAAGTAACGCACAAGTTAAAAACAAAAGAGAACTATTTCACCATCGGGAGCTCTCATGCTATTGATTCTTCGACGTTGCTGAAGACAAGATTTAGCAATGGTGGCAAAGTTGGAGTTCTCTGTCAGCATGAGTGGAGGCCCAAGTCTACTGTAAGTATTTCTGCCGAGTATGATCCCAAAGTGGTGAGTTCGCCTTCAAGATTCGGCGTGGCCATAGCCTTGAAGCCTTGATTATCACCTCCTGTACAAGTGTTAGATACTTCTTGCCCGTGTGCATCCTAGCCATACTTACGAAAGCTCCACCATTTTATGCCCGTTTTGTAAGTGTCTTGGCCGAAGAAACGTTGTTGTCTTGGAGTTGGTCTTAGTTTTGTGGAACCCTACCACCAGCCGACTTCATCCCGAGAATTGAAAATACAGAGAGTTTTGTACTGGAAACAATAGATTTACTGTT                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL C28630               [                                                                                GCGCCGACCAGCGCAG CGCAGCGGCGCCGGCGTCCTGCTGCTTCCGNCCGCATCCTCGCCGGTAAGAGGCAGAATCACTTCGTTAGGCAAGGATGAGCAAAGGCCCAGCTCCGTTCCTCAACATTGGGAAGAGAGCAAAAGATCTTTTGTACAAGGACTACAATTTTGACCAAAAGTTTTCTTTAACGACAACTAGCAATTCTGGTTTGGGTCTAACAGCCACCGGTGTGAAGATAGACGAACTC TTCATCGGTGACATACAGACACAACATAAAAGT GGCAAAACCAC TGTTGATGTCAAGATTNGATAGTTGAATCTA GAGTGTCAACCACAGTCACTGTTTGAT GAAGCCCTTACT GGTC TNAAGACTTTCTTTTAGGT TTCAGGGGTTCCT GATTCAAAAGTCCCGGGAAGGTTT GATTTTGCAATACCTTCATGACCATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C28907               [                                                                                 CGCCGACCAGCG ACCGGCAGCNGCGCNGGCGTCCTGCTGCTTCCGCCCGCATCCTCGCCGGTAAGAGGCAGAATCACTTCGTTAGGCAAGGATGAGCAAAGGCCCAGCTCCGTTCCTCAACATTGGGAAGAGAGCAAAAGATCTTTTGTACAAGGACTACAATTTTGACCAAAAGTTTTCTTTAACGACAACTAGCAATTCTGGTTTGGGTCTAACAGCCACCGGTGTGAAGATAGACGAACTCTTTCATCGGTGACATACAGACACAACATAAAAGTGGGCAAAACCACTTGTTGATGTCAAGATT GATAG TGAATCTAGGAGTGTCAACCACAGTCACTG TTGATGGAAGCCCTTACTNGGTCTTGAGGCT TTCTTTTA GCTTTCAGGGGTTCCTGGA TCAAAAGTCCCGGGAA GCTTGGA TTTNCAATACCTTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF323226             [                                                                                            GCAGCCGCAGCGGCGCCGGCGTCCTGCTGCTTCCGCCCGCATCCTCGCCGGTAAGAGGCAGAATCACTTCGTTAGGCAAGGATGAGCAAAGGCCCAGCTCCGTTCCTCAACATTGGGAAGAGAGCAAAAGATCTTTTGTACAAGGACTACAATTTTGACCAAAAGTTTTCTTTAACGACAACTAGCAATTCTGGTTTGGGTCTAACAGCCACCGGTGTGAAGATAGACGAACTC TTCATCGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU172313             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ACTATTTCACCATCGGGAGCTCTCATGCTATTGATTCTTCGACGTTGCTGAAGACAAGATTTAGCAATGGTGGCAAAGTTGGAGTTCTCTGTCAGCATGAGTGGAGGCCCAAGTNTACTGTAAGTATTTCTGCCGAGTATGATCCCAAAGTGGTGAGTTCGCCTTCAAGATTCGGCGTGGCCATAGCCTTGAAGCCTTGATTATCNCCTCCTGTACAAGTGTTAGATACTTNTTGCCCGTGTGCATCCTAGCCATACTTACGAAAGCTCCNCCATTTTATGCCCGTTTTGTAAGTGTCTTGGCCGAAGAAACGTTGTTGTNTTGGAGTTGGTCTTAGTTTTGTGGAACCCTACCNCCAGCCGACTTCATCCCGAGAATTGAAAATACAGAGAGTTTTGTACTGGAAACAATAGATTTACTGTTTTGCTGCTTCAGAAAaaaaaaa                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BI797378             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATGATCCC AAGTGGTGAGTTC CCTTCAAGATTCGGC T GCCATA CCTTGAA CCTTGATTATCACCTCCTGTACAAGTGTTAGATACTTCTTGCCCGTGTGCATCCTA CCATACTTACGAAAGCTCCACCATTTTATGCCC TTTTGTAAGTGTCTT GCCGAAGAAACGTTGTTGTCTTGGAGTTGGTCTTAGTTTTGTGGAACCCTACCACCAGCCGACTTCATCCCGAGAATTGAAAATACAGAGAGTTTTGTACTGGAAAC ATAGATTTACTGTTTTGCTGCTTCAGAAACTATTCGGTGTCGATTGTACACCCTTGAAGAGCCCCCCTTGAAGAAGAATATCAGGGTAAGTGACTAAGTGCCACGTTGGTTTGTTGCTGAGCC AATGGGAGTTGGAAATGATTCGATATCTGCATTATTCTGTGAT CAGTTTTGGTTGGCTTGTTGCTGA CCAAATGGGAGTTAGAAATGATTTGA ATCTGTTTTTTTATCCAGTTTTGGCATGCTGATGTGGCCCTTTTTTTTCAAaaaaaaaa                                                                                                    ]


>consensus_11811#0 TCTGACTTCCCTACGTTCTCCTCTCTCTCTCGGCTTCCACTCCCGTCTCCTCGTCTCCTC GCGTGTTCGCCCGCCGCCCTGCGCCGACCAGCGCAGCCGCAGCGGCGCCGGCGTCCTGCT GCTTCCGCCCGCATCCTCGCCGGTAAGAGGCAGAATCACTTCGTTAGGCAAGGATGAGCA AAGGCCCAGCTCCGTTCCTCAACATTGGGAAGAGAGCAAAAGATCTTTTGTACAAGGACT ACAATTTTGACCAAAAGTTTTCTTTAACGACAACTAGCAATTCTGGTTTGGGTCTAACAG CCACCGGTGTGAAGATAGACGAACTCTTCATCGGTGACATACAGACACAACATAAAAGTG GCAAAACCACTGTTGATGTCAAGATTGATAGTGAATCTAGAGTGTCAACCACAGTCACTG TTGATGAAGCCCTTACTGGTCTGAAGACTTCTTTTAGCTTCAGGGTTCCTGATCAAAAGT CCGGGAAGCTTGATTTGCAATACCTTCATGACCATTTTGCACTGAATTCTACCATTGGTT TGACATCAACGCCTTTAATTGAGCTGGCAGCAACTATCGGCACGAATGAACTTAGTGCTG GTGCTGAGGTTGGATTCGACAGCACTTCAGCTTCTGTTACTAAGTACAACTCAGGGATCT GCTATAACAAACATGATTTTTCTGCTGCCGTACTATTGGCTGATAAAGGGGAGACTTTAA AAGCTTCTTATATCCACACGTTCAATGAAACCAATGGAGCTACAGTGGCGGCTGAAGTAA CGCACAAGTTAAAAACAAAAGAGAACTATTTCACCATCGGGAGCTCTCATGCTATTGATT CTTCGACGTTGCTGAAGACAAGATTTAGCAATGGTGGCAAAGTTGGAGTTCTCTGTCAGC ATGAGTGGAGGCCCAAGTCTACTGTAAGTATTTCTGCCGAGTATGATCCCAAAGTGGTGA GTTCGCCTTCAAGATTCGGCGTGGCCATAGCCTTGAAGCCTTGATTATCACCTCCTGTAC AAGTGTTAGATACTTCTTGCCCGTGTGCATCCTAGCCATACTTACGAAAGCTCCACCATT TTATGCCCGTTTTGTAAGTGTCTTGGCCGAAGAAACGTTGTTGTCTTGGAGTTGGTCTTA GTTTTGTGGAACCCTACCACCAGCCGACTTCATCCCGAGAATTGAAAATACAGAGAGTTT TGTACTGGAAACAATAGATTTACTGTTTTGCTGCTTCAGAAACTATTCGGTGTCGATTGT ACACCTTGAAGAGCCCCCCTTGAAGAAGAATATCAGGGTAAGTGACTAAGTGCCACGTTG GTTTGTTGCTGAGCCAAATGGGAGTTGGAAATGATTCGATATCTGCATTATTCTGTGATG CAGTTTTGGTTGGCTTGTTGCTGAGCCAAATGGGAGTTAGAAATGATTTGATATCTGTTT TTTTATGCAGTTTTGGCATGCTGATGTGCCCTTTTTTTTCAATTGTTTGCAGTGTACCAT ATGGTCATTTCAATTGTTTCAAGAGAGTACACTATTTAGACATTGTACTAACAATGTTTT GTTCTGATGCTCATCACCGCTAAATATAGT



consensusID : consensus_11811#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 431
fasta sequence
                              [TCCACTCCCGTCTCCTCGTCTCCTCGCGTGTTCGCCCGCCGCCCTGCGCCGACCAGCGCAGCCGCAGCGGCGCCGGCGTCCTGCTGCTTCCGCCCGCATCCTCGCCGGTAAGAGGCAGAATCACTTCGTTAGGCAAGGATGAGCAAAGGCCCAGCTCCGTTCCTCAACATTGGGAAGAGAGCAAAAGGCAAGCAGTGTCTATGTCTCGGAAGACTGTAGTTTATTTTCCGTCTCGCTTCGTGCCACTTTGTGCATTTTGCGGGTCAAATTTTGTTTGGTAGTTTAACTTTGTTGTCTTAAAAAAAATTATTAGAAGCAGTGTGTGTTTTCTTAGTATCTCTTTTATGCTGCTGTGTACTGTCTGTATGTGATACTTTTGGCACAACTTGGAATCCAGTGAGGTCAAATGACTTTGCTGGGTATCACAGGAT]

[+] EMBL AK107864             [TCCACTCCCGTCTCCTCGTCTCCTCGCGTGTTCGCCCGCCGCCCTGCGCCGACCAGCGCAGCCGCAGCGGCGCCGGCGTCCTGCTGCTTCCGCCCGCATCCTCGCCGGTAAGAGGCAGAATCACTTCGTTAGGCAAGGATGAGCAAAGGCCCAGCTCCGTTCCTCAACATTGGGAAGAGAGCAAAAGGCAAGCAGTGTCTATGTCTCGGAAGACTGTAGTTTATTTTCCGTCTCGCTTCGTGCCACTTTGTGCATTTTGCGGGTCAAATTTTGTTTGGTAGTTTAACTTTGTTGTCTTAAAAAAAATTATTAGAAGCAGTGTGTGTTTTCTTAGTATCTCTTTTATGCTGCTGTGTACTGTCTGTATGTGATACTTTTGGCACAACTTGGAATCCAGTGAGGTCAAATGACTTTGCTGGGTATCACAGGAT]


>consensus_11811#1 TCCACTCCCGTCTCCTCGTCTCCTCGCGTGTTCGCCCGCCGCCCTGCGCCGACCAGCGCA GCCGCAGCGGCGCCGGCGTCCTGCTGCTTCCGCCCGCATCCTCGCCGGTAAGAGGCAGAA TCACTTCGTTAGGCAAGGATGAGCAAAGGCCCAGCTCCGTTCCTCAACATTGGGAAGAGA GCAAAAGGCAAGCAGTGTCTATGTCTCGGAAGACTGTAGTTTATTTTCCGTCTCGCTTCG TGCCACTTTGTGCATTTTGCGGGTCAAATTTTGTTTGGTAGTTTAACTTTGTTGTCTTAA AAAAAATTATTAGAAGCAGTGTGTGTTTTCTTAGTATCTCTTTTATGCTGCTGTGTACTG TCTGTATGTGATACTTTTGGCACAACTTGGAATCCAGTGAGGTCAAATGACTTTGCTGGG TATCACAGGAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11811#0      TCTGACTTCCCTACGTTCTCCTCTCTCTCTCGGCTTCCACTCCCGTCTCCTCGTCTCCTC 60
consensus_11811#1      -----------------------------------TCCACTCCCGTCTCCTCGTCTCCTC 25
                                                          *************************

consensus_11811#0      GCGTGTTCGCCCGCCGCCCTGCGCCGACCAGCGCAGCCGCAGCGGCGCCGGCGTCCTGCT 120
consensus_11811#1      GCGTGTTCGCCCGCCGCCCTGCGCCGACCAGCGCAGCCGCAGCGGCGCCGGCGTCCTGCT 85
                       ************************************************************

consensus_11811#0      GCTTCCGCCCGCATCCTCGCCGGTAAGAGGCAGAATCACTTCGTTAGGCAAGGATGAGCA 180
consensus_11811#1      GCTTCCGCCCGCATCCTCGCCGGTAAGAGGCAGAATCACTTCGTTAGGCAAGGATGAGCA 145
                       ************************************************************

consensus_11811#0      AAGGCCCAGCTCCGTTCCTCAACATTGGGAAGAGAGCAAAAGATCTTTTGTACAAGGACT 240
consensus_11811#1      AAGGCCCAGCTCCGTTCCTCAACATTGGGAAGAGAGCAAAAGG-----CAAGCAGTGTCT 200
                       ******************************************          **  * **

consensus_11811#0      ACAATTTTGACCAAAAGTTTTCTTTAACGACAACTAGCAATTCTGGTTTGGGTCTAACAG 300
consensus_11811#1      ATGTCTCGGAAGACTGTAGTTTATTTTCCGTCTCGCTTCGTGCCACTTTGTG-----CAT 255
                       *    *  **  *      **  **  *     *      * *   **** *     ** 

consensus_11811#0      CCACCGGTGTGAAGATAGACGAACTCTTCATCGGTGACATACAGACACAACATAAAAGTG 360
consensus_11811#1      TTTGCGGGTCAAATTTTGTTTGGTAGTTTAACTTTGTTGTCTTAAAA------AAAATTA 309
                           ***    **  * *        ** * *  **   *    * *      **** * 

consensus_11811#0      GCAAAACCACTGTTGATGTCAAGATTGATAGTGAATCTAGAGTGTCAACCACAGTCACTG 420
consensus_11811#1      TTAGAAGCAGTGTGTGTTTTC---TTAGTATCTCTTTTATGCTGCTGTGTACTGTC--TG 364
                         * ** ** ***   * *     **  **     * **   **      ** ***  **

consensus_11811#0      TTGATGAAGCCCTTACTGGTCTGAAGACTTCTTTTAGCTTCAGGGTTCCTGATCAAAAGT 480
consensus_11811#1      TATGTGATACTTTTGGCACAACTTGGAATCCAGTGAGGTCAAATGACTTTGCTGGGTATC 424
                       *   ***  *  **           ** * *  * ** *  *  *    ** *    *  

consensus_11811#0      CCGGGAAGCTTGATTTGCAATACCTTCATGACCATTTTGCACTGAATTCTACCATTGGTT 540
consensus_11811#1      ACAGGAT----------------------------------------------------- 431
                        * ***                                                      

consensus_11811#0      TGACATCAACGCCTTTAATTGAGCTGGCAGCAACTATCGGCACGAATGAACTTAGTGCTG 600
consensus_11811#1      ------------------------------------------------------------
                                                                                   

consensus_11811#0      GTGCTGAGGTTGGATTCGACAGCACTTCAGCTTCTGTTACTAAGTACAACTCAGGGATCT 660
consensus_11811#1      ------------------------------------------------------------
                                                                                   

consensus_11811#0      GCTATAACAAACATGATTTTTCTGCTGCCGTACTATTGGCTGATAAAGGGGAGACTTTAA 720
consensus_11811#1      ------------------------------------------------------------
                                                                                   

consensus_11811#0      AAGCTTCTTATATCCACACGTTCAATGAAACCAATGGAGCTACAGTGGCGGCTGAAGTAA 780
consensus_11811#1      ------------------------------------------------------------
                                                                                   

consensus_11811#0      CGCACAAGTTAAAAACAAAAGAGAACTATTTCACCATCGGGAGCTCTCATGCTATTGATT 840
consensus_11811#1      ------------------------------------------------------------
                                                                                   

consensus_11811#0      CTTCGACGTTGCTGAAGACAAGATTTAGCAATGGTGGCAAAGTTGGAGTTCTCTGTCAGC 900
consensus_11811#1      ------------------------------------------------------------
                                                                                   

consensus_11811#0      ATGAGTGGAGGCCCAAGTCTACTGTAAGTATTTCTGCCGAGTATGATCCCAAAGTGGTGA 960
consensus_11811#1      ------------------------------------------------------------
                                                                                   

consensus_11811#0      GTTCGCCTTCAAGATTCGGCGTGGCCATAGCCTTGAAGCCTTGATTATCACCTCCTGTAC 1020
consensus_11811#1      ------------------------------------------------------------
                                                                                   

consensus_11811#0      AAGTGTTAGATACTTCTTGCCCGTGTGCATCCTAGCCATACTTACGAAAGCTCCACCATT 1080
consensus_11811#1      ------------------------------------------------------------
                                                                                   

consensus_11811#0      TTATGCCCGTTTTGTAAGTGTCTTGGCCGAAGAAACGTTGTTGTCTTGGAGTTGGTCTTA 1140
consensus_11811#1      ------------------------------------------------------------
                                                                                   

consensus_11811#0      GTTTTGTGGAACCCTACCACCAGCCGACTTCATCCCGAGAATTGAAAATACAGAGAGTTT 1200
consensus_11811#1      ------------------------------------------------------------
                                                                                   

consensus_11811#0      TGTACTGGAAACAATAGATTTACTGTTTTGCTGCTTCAGAAACTATTCGGTGTCGATTGT 1260
consensus_11811#1      ------------------------------------------------------------
                                                                                   

consensus_11811#0      ACACCTTGAAGAGCCCCCCTTGAAGAAGAATATCAGGGTAAGTGACTAAGTGCCACGTTG 1320
consensus_11811#1      ------------------------------------------------------------
                                                                                   

consensus_11811#0      GTTTGTTGCTGAGCCAAATGGGAGTTGGAAATGATTCGATATCTGCATTATTCTGTGATG 1380
consensus_11811#1      ------------------------------------------------------------
                                                                                   

consensus_11811#0      CAGTTTTGGTTGGCTTGTTGCTGAGCCAAATGGGAGTTAGAAATGATTTGATATCTGTTT 1440
consensus_11811#1      ------------------------------------------------------------
                                                                                   

consensus_11811#0      TTTTATGCAGTTTTGGCATGCTGATGTGCCCTTTTTTTTCAATTGTTTGCAGTGTACCAT 1500
consensus_11811#1      ------------------------------------------------------------
                                                                                   

consensus_11811#0      ATGGTCATTTCAATTGTTTCAAGAGAGTACACTATTTAGACATTGTACTAACAATGTTTT 1560
consensus_11811#1      ------------------------------------------------------------
                                                                                   

consensus_11811#0      GTTCTGATGCTCATCACCGCTAAATATAGT 1590
consensus_11811#1      ------------------------------
                                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)