These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11812#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1022 fasta sequence [GGAGTAGAAACTTCCCACTCTCTCTCTCCCATTCCATTTCCCTTCTCCCCCAGCCAGAGGCAGAGGCTCCCGCGACCTCGTCGGCGACGGCGACCGCGACCGCGCGACGACGAGGAAGCGAAGGACGAGGAAGCGAGCGCGCCACCATCTTCATAGCTCGCTCTCCTCCTCACCTCAGGTGGTGAACCGAGGAGACCTGCGTGGGGTGGGGGATGGAGGAGGAGGAGGCGGGTGT-GAGGGANCGCCGCGGCGTGCTCAAGGTGGTGGTGGCCAGCGGGACCAACCTCGCCGTCCGGGACTTCACCTCCAGCGACCCCTACGTCGTCGTCCGCCTCGCCGCCATGAATAAGAAGACAAAAGTCATCAACAGCTGCCTAAACCCAGTTTGGAACGAAGAGATGTCCTTCTCCATCGAAGAACCAGCAGGGGTCATCAAATTCGAGGTGTTCGACTGGGACCGGTTCAAGTACGACGATAAAATGGGGCACGCGTTTCTTGAGCTGCAGCCGGTGGCCGCGGCGGCGAAGCTGCGGCGTGCGCTGCGGCTGACGACGGGGGAGACCAAGCTCCGGAAGGTTGCCGCCAGCGTCGACAACTGCCTCATGTGCGACAGCTTCGTGACGTACGCCGACGGTGAGATCGTGCTCGACGCCAGGCTGCGGCTGCGCGACGTCGAGTCCGGCGAGCTGTTCGTCACTGTCAAGTGGATCGATGCGAACGCCAAGTGAGAAAATGGGACTCCGTGTGAATGCTGTCTGATCTAAATCTGAAATTTCCAGACAGTTCTAACAGGCATAGTATTAGCGTGTGCGTGCATGTTCAGAATGTTTTTGTGCTTTTCTTTTTTAATGAACGATCGGGAAAGTAGGAAACTCTAATTATTGTTTGGAAATAGGAACGCAATGTGTTCTCCCCACTCTTTTTAGCCCATTCTAGAGATAAGTACCCTTTTTCTCCAATTCATATGTGTACAAGTATTACATTGTTTTTCTCTAAATATGTGCACCATTCATG-GAAAAAAA] [+] EMBL CF335972 [GGAGTAGAAACTTCCAACTCTCTCTCTCCCATTCCATTTCCCTTCTCCCCCAGCCAGAGGCAGAGGCTCCCGCGACCTCGTCGGCGACGGCGACCGCGACCGCGCGACGACGAGGAAGCGAAGGACGAGGAAGCGAGCGCGCCACCATCTTCATAGCTCGCTCTCCTCCTCACCTCAGGTGGTGAACCGAGGAGACCTGCGTGGGGTGGGGGATGGAGGAGGAGGAGGCCGGTGTNAAGGNANCNCCGCGGCGTGCTCAAGGTGGTGGTGGCCAGCGGGACCAACCTCGCCGTCCGGGACTTCACCTCCAGCGACCCCTACGTCGTCGTCCGCCTCGCCGCCATGAATAAGAAGACAAAAGTCATCAACAGCTGCCTAAACCCAGTTTGGAACGAAGAGATGTCCTTCTCCATCGAAGAACCAGCAGGGGTCATCAAATTCGAGGTGTTCGACTGGGACCGGTTCAAGTACGACGATAAAAT ] [+] EMBL CF295739 [ CCCACTCTCTCTCTCCCATTCCATTTCCCTTCTCCCCCAGCCAGAGGCAGAGGCTCCCGCGACCTCGTCGGCGGCGGCGACCGCGACCGCGCGACGACGAGGAAGCGAAGGACGAGGAAGCGAGCGCGCCACCATCTTCATAGCTCGCTCTCCTCCTCACCTCAGGTGGTGAACCGAGGAGACCTGCGTGGGGTGGGGGATGGAGGAGGAGGAGGCGGGTGT GAGGGANCGCCGCGGCGTGCTCAAGGTGGTGGTGGCCAGCGGGACCAACCTCGCCGTCCGGGACTTCACCTCCAGCGACCCCTACGTCGTCGTCCGCCTCGCCGCCATGAATAAGAAGACAAAAGTCATCAACAGCTGCCTAAACCCAGTTTGGAACGAAGAGATGTCCTTCTCCATCGAAGAACCAGCAGGGGTCATCAAATTCGAGGTGTTCGACTGGGACCGGTTCAAGTACGACGATAAAATGGGGCAC ] [+] EMBL CF309306 [ CACTCTCTCTCTCCCATTCCATTTCCCTTCTCCCCCAGCCAGAGGCAGAGGCTCCCGCGACCTCGTCGGCGACGGCGACCGCGACCGCGCGACGACGAGGAAGCGAAGGACGAGGAAGCGAGCGCGCCACCATCTTCATAGCTCGCTCTCCTCCTCACCTCAGGTGGTGAACCGAGGAGACCTGCGTGGGG ] [+] EMBL CF297344 [ CTCTCCCATTCCATTTCCCTTCTCCCCCAGCCAGAGGCAGAGGCTCCCGCGACCTCGTCGGCGACGGCGACCGCGACCGCGCGACGACGAGGAAGCGAAGGACGAGGAAGCGAGCGCGCCACCATCTTCATAGCTCGCTCTCCTCCTCACCTCAGGTGGTGAACCGAGGAGACCTGCGTGGGGTG ] [+] EMBL AK061218 [ TCTCCCATTCCATTTCCCTTCTCCCCCAGCCAGAGGCAGAGGCTCCCGCGACCTCGTCGGCGACGGCGACCGCGACCGCGCGACGACGAGGAAGCGAAGGACGAGGAAGCGAGCGCGCCACCATCTTCATAGCTCGCTCTCCTCCTCACCTCAGGTGGTGAACCGAGGAGACCTGCGTGGGGTGGGGGATGGAGGAGGAGGAGGCGGGTGT GAGGGAGCGCCGCGGCGTGCTCAAGGTGGTGGTGGCCAGCGGGACCAACCTCGCCGTCCGGGACTTCACCTCCAGCGACCCCTACGTCGTCGTCCGCCTCGCCGCCATGAATAAGAAGACAAAAGTCATCAACAGCTGCCTAAACCCAGTTTGGAACGAAGAGATGTCCTTCTCCATCGAAGAACCAGCAGGGGTCATCAAATTCGAGGTGTTCGACTGGGACCGGTTCAAGTACGACGATAAAATGGGGCACGCGTTTCTTGAGCTGCAGCCGGTGGCCGCGGCGGCGAAGCTGCGGCGTGCGCTGCGGCTGACGACGGGGGAGACCAAGCTCCGGAAGGTTGCCGCCAGCGTCGACAACTGCCTCATGTGCGACAGCTTCGTGACGTACGCCGACGGTGAGATCGTGCTCGACGCCAGGCTGCGGCTGCGCGACGTCGAGTCCGGCGAGCTGTTCGTCACTGTCAAGTGGATCGATGCGAACGCCAAGTGAGAAAATGGGACTCCGTGTGAATGCTGTCTGATCTAAATCTGAAATTTCCAGACAGTTCTAACAGGCATAGTATTAGCGTGTGCGTGCATGTTCAGAATGTTTTTGTGCTTTTCTTTTTTAATGAACGATCGGGAAAGTAGGAAACTCTAATTATTGTTTGGAAATAGGAACGCAATGTGTTCTCCCCACTCTTTTTAGCCCATTCTAGAGATAAGTACCCTTTTTCTCCAATTCATATGTGTACAAGTATTACATTGTTTTTCTCTAAATATGTGCAC ] [+] EMBL AK104010 [ CCCTTCTCCCCCAGCCAGAGGCAGAGGCTCCCGCGACCTCGTCGGCGACGGCGACCGCGACCGCGCGACGACGAGGAAGCGAAGGACGAGGAAGCGAGCGCGCCACCATCTTCATAGCTCGCTCTCCTCCTCACCTCAGGTGGTGAACCGAGGAGACCTGCGTGGGGTGGGGGATGGAGGAGGAGGAGGCGGGTGT GAGGGAGCGCCGCGGCGTGCTCAAGGTGGTGGTGGCCAGCGGGACCAACCTCGCCGTCCGGGACTTCACCTCCAGCGACCCCTACGTCGTCGTCCGCCTCGCCGCCATGAATAAGAAGACAAAAGTCATCAACAGCTGCCTAAACCCAGTTTGGAACGAAGAGATGTCCTTCTCCATCGAAGAACCAGCAGGGGTCATCAAATTCGAGGTGTTCGACTGGGACCGGTTCAAGTACGACGATAAAATGGGGCACGCGTTTCTTGAGCTGCAGCCGGTGGCCGCGGCGGCGAAGCTGCGGCGTGCGCTGCGGCTGACGACGGGGGAGACCAAGCTCCGGAAGGTTGCCGCCAGCGTCGACAACTGCCTCATGTGCGACAGCTTCGTGACGTACGCCGACGGTGAGATCGTGCTCGACGCCAGGCTGCGGCTGCGCGACGTCGAGTCCGGCGAGCTGTTCGTCACTGTCAAGTGGATCGATGCGAACGCCAAGTGAGAAAATGGGACTCCGTGTGAATGCTGTCTGATCTAAATCTGAAATTTCCAGACAGTTCTAACAGGCATAGTATTAGCGTGTGCGTGCATGTTCAGAATGTTTTTGTGCTTTTCTTTTTTAATGAACGATCGGGAAAGTAGGAAACTCTAATTATTGTTTGGAAATAGGAACGCAATGTGTTCTCCCCACTCTTTTTAGCCCATTCTAGAGATAAGTACCCTTTTTCTCCAATTCATATGTGTACAAGTA ] [-] EMBL CF295740 [ GTCATCAAATTCGAGGTGTTCGACTGGGACCGGTTCAAGTACGACGATAAAATGGGGCACGCGTTTCTTGAGCTGCAGCCGGTGGCCGCGGCGGCGAAGCTGCGGCGTGCGCTGCGGCTGACGACGGGGGAGACCAAGCTCCGGAAGGTTGCCGCCAGCGTCGACAACTGCCTCATGTGCGACAGCTTCGTGACGTACGCCGACGGTGAGATCGTGCTCGACGCCAGGCTGCGGCTGCGCGACGTCGAGTCCGGCGAGCTGTTCGTCACTGTCAAGTGGATCGATGCGAACGCCAAGTGAGAAAATGGGACTCCGTGTGAATGCTGTCTGATCTAAATCTGAAATTTCCAGACAGTTTTAACAGGCATAGTATTAGCGTGTGCGTGCATGTTCAGAATGTTTTTGTGCTTTTCTTTTTTAAAGAACGATCGGGAAAGTAGGAAACTCTAATTATTGTTTGGAAATAGGAACGCAATGTGTTCTCCCCACTCTTTTTAGCCCATTTTAGAGATAAGTACCCTTTTTCTCCAATTCATATGTGTACAAGTATTACATTGTTTTTCTCTAAATATGTGCACCATTCATGTGAAAAAAA] [-] EMBL CF335973 [ acGGGGAGACCAAGCTCC GAAGGTTGCCGCCAGCGTCGACAACTG CTCATGTGCGACAGCTTCGTGACGTACGCCGACGGTGAGATCGTGCTCGACGCCAGGCTGCGGCTGCGCGACGTCGAGTCCGGCGAGCTGTTCGTCACTGTCAAGTGGATCGATGCGAACGCCAAGTGAGAAAATGGGACTCCGTGTGAATGCTGTCTGATCTAAATCTGAAATTTCCAGACAGTTCTAACAGGCATAGTATTAGCGTGTGCGTGCATGTTCAGAATGTTTTTGTGCTTTTCTTTTTTAATGAACGATCGGGAAAGTAGGAAACTCTAATTATTGTTTGGAAATAGGAACGCAATGTGTTCTCCCCACTCTTTTTAGCCCATTCTAGAGATAAGTACCCTTTTTCTCCAATTCATATGTGTACAAGTATTACATTGTTTTTCTCTAAATATGTGCACCATTCATG GAAAAAA ] [-] EMBL CF297345 [ TGCTCGACGCCAGGCTGCGGCTGCGCGACGTCGAAGCCGGCGAGCTGTTCGTCACTGTCAAGTGGATCGATGCGAACGCCAAGTGAGAAAATGGGACTCCGTGTGAATGCTGTCTGATCTAAATCTGAAATTTCCAGACAGTTCTAACAGGCATAGTATTAGCGTGTGCGTGCATGTTCAGAATGTTTTTGTGCTTTTCTTTTTTAATGAACGATCGGGAAAGTAGGAAACTCTAATTATTGTTTGGAAATAGGAACGCAATGTGTTCTCCCCACTCTTTTTAGCCCATTCTAGAGATAAGTACCCTTTTTCTCCAATTCATATGTGTACAAGTAT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||