cluster # 11812

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Oryza sativa
cluster # 11812 cluster # 11812 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11812#0 length = 1022 sequences # 9
consensusID : consensus_11812#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1022
fasta sequence
                              [GGAGTAGAAACTTCCCACTCTCTCTCTCCCATTCCATTTCCCTTCTCCCCCAGCCAGAGGCAGAGGCTCCCGCGACCTCGTCGGCGACGGCGACCGCGACCGCGCGACGACGAGGAAGCGAAGGACGAGGAAGCGAGCGCGCCACCATCTTCATAGCTCGCTCTCCTCCTCACCTCAGGTGGTGAACCGAGGAGACCTGCGTGGGGTGGGGGATGGAGGAGGAGGAGGCGGGTGT-GAGGGANCGCCGCGGCGTGCTCAAGGTGGTGGTGGCCAGCGGGACCAACCTCGCCGTCCGGGACTTCACCTCCAGCGACCCCTACGTCGTCGTCCGCCTCGCCGCCATGAATAAGAAGACAAAAGTCATCAACAGCTGCCTAAACCCAGTTTGGAACGAAGAGATGTCCTTCTCCATCGAAGAACCAGCAGGGGTCATCAAATTCGAGGTGTTCGACTGGGACCGGTTCAAGTACGACGATAAAATGGGGCACGCGTTTCTTGAGCTGCAGCCGGTGGCCGCGGCGGCGAAGCTGCGGCGTGCGCTGCGGCTGACGACGGGGGAGACCAAGCTCCGGAAGGTTGCCGCCAGCGTCGACAACTGCCTCATGTGCGACAGCTTCGTGACGTACGCCGACGGTGAGATCGTGCTCGACGCCAGGCTGCGGCTGCGCGACGTCGAGTCCGGCGAGCTGTTCGTCACTGTCAAGTGGATCGATGCGAACGCCAAGTGAGAAAATGGGACTCCGTGTGAATGCTGTCTGATCTAAATCTGAAATTTCCAGACAGTTCTAACAGGCATAGTATTAGCGTGTGCGTGCATGTTCAGAATGTTTTTGTGCTTTTCTTTTTTAATGAACGATCGGGAAAGTAGGAAACTCTAATTATTGTTTGGAAATAGGAACGCAATGTGTTCTCCCCACTCTTTTTAGCCCATTCTAGAGATAAGTACCCTTTTTCTCCAATTCATATGTGTACAAGTATTACATTGTTTTTCTCTAAATATGTGCACCATTCATG-GAAAAAAA]

[+] EMBL CF335972             [GGAGTAGAAACTTCCAACTCTCTCTCTCCCATTCCATTTCCCTTCTCCCCCAGCCAGAGGCAGAGGCTCCCGCGACCTCGTCGGCGACGGCGACCGCGACCGCGCGACGACGAGGAAGCGAAGGACGAGGAAGCGAGCGCGCCACCATCTTCATAGCTCGCTCTCCTCCTCACCTCAGGTGGTGAACCGAGGAGACCTGCGTGGGGTGGGGGATGGAGGAGGAGGAGGCCGGTGTNAAGGNANCNCCGCGGCGTGCTCAAGGTGGTGGTGGCCAGCGGGACCAACCTCGCCGTCCGGGACTTCACCTCCAGCGACCCCTACGTCGTCGTCCGCCTCGCCGCCATGAATAAGAAGACAAAAGTCATCAACAGCTGCCTAAACCCAGTTTGGAACGAAGAGATGTCCTTCTCCATCGAAGAACCAGCAGGGGTCATCAAATTCGAGGTGTTCGACTGGGACCGGTTCAAGTACGACGATAAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF295739             [             CCCACTCTCTCTCTCCCATTCCATTTCCCTTCTCCCCCAGCCAGAGGCAGAGGCTCCCGCGACCTCGTCGGCGGCGGCGACCGCGACCGCGCGACGACGAGGAAGCGAAGGACGAGGAAGCGAGCGCGCCACCATCTTCATAGCTCGCTCTCCTCCTCACCTCAGGTGGTGAACCGAGGAGACCTGCGTGGGGTGGGGGATGGAGGAGGAGGAGGCGGGTGT GAGGGANCGCCGCGGCGTGCTCAAGGTGGTGGTGGCCAGCGGGACCAACCTCGCCGTCCGGGACTTCACCTCCAGCGACCCCTACGTCGTCGTCCGCCTCGCCGCCATGAATAAGAAGACAAAAGTCATCAACAGCTGCCTAAACCCAGTTTGGAACGAAGAGATGTCCTTCTCCATCGAAGAACCAGCAGGGGTCATCAAATTCGAGGTGTTCGACTGGGACCGGTTCAAGTACGACGATAAAATGGGGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF309306             [               CACTCTCTCTCTCCCATTCCATTTCCCTTCTCCCCCAGCCAGAGGCAGAGGCTCCCGCGACCTCGTCGGCGACGGCGACCGCGACCGCGCGACGACGAGGAAGCGAAGGACGAGGAAGCGAGCGCGCCACCATCTTCATAGCTCGCTCTCCTCCTCACCTCAGGTGGTGAACCGAGGAGACCTGCGTGGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CF297344             [                       CTCTCCCATTCCATTTCCCTTCTCCCCCAGCCAGAGGCAGAGGCTCCCGCGACCTCGTCGGCGACGGCGACCGCGACCGCGCGACGACGAGGAAGCGAAGGACGAGGAAGCGAGCGCGCCACCATCTTCATAGCTCGCTCTCCTCCTCACCTCAGGTGGTGAACCGAGGAGACCTGCGTGGGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK061218             [                        TCTCCCATTCCATTTCCCTTCTCCCCCAGCCAGAGGCAGAGGCTCCCGCGACCTCGTCGGCGACGGCGACCGCGACCGCGCGACGACGAGGAAGCGAAGGACGAGGAAGCGAGCGCGCCACCATCTTCATAGCTCGCTCTCCTCCTCACCTCAGGTGGTGAACCGAGGAGACCTGCGTGGGGTGGGGGATGGAGGAGGAGGAGGCGGGTGT GAGGGAGCGCCGCGGCGTGCTCAAGGTGGTGGTGGCCAGCGGGACCAACCTCGCCGTCCGGGACTTCACCTCCAGCGACCCCTACGTCGTCGTCCGCCTCGCCGCCATGAATAAGAAGACAAAAGTCATCAACAGCTGCCTAAACCCAGTTTGGAACGAAGAGATGTCCTTCTCCATCGAAGAACCAGCAGGGGTCATCAAATTCGAGGTGTTCGACTGGGACCGGTTCAAGTACGACGATAAAATGGGGCACGCGTTTCTTGAGCTGCAGCCGGTGGCCGCGGCGGCGAAGCTGCGGCGTGCGCTGCGGCTGACGACGGGGGAGACCAAGCTCCGGAAGGTTGCCGCCAGCGTCGACAACTGCCTCATGTGCGACAGCTTCGTGACGTACGCCGACGGTGAGATCGTGCTCGACGCCAGGCTGCGGCTGCGCGACGTCGAGTCCGGCGAGCTGTTCGTCACTGTCAAGTGGATCGATGCGAACGCCAAGTGAGAAAATGGGACTCCGTGTGAATGCTGTCTGATCTAAATCTGAAATTTCCAGACAGTTCTAACAGGCATAGTATTAGCGTGTGCGTGCATGTTCAGAATGTTTTTGTGCTTTTCTTTTTTAATGAACGATCGGGAAAGTAGGAAACTCTAATTATTGTTTGGAAATAGGAACGCAATGTGTTCTCCCCACTCTTTTTAGCCCATTCTAGAGATAAGTACCCTTTTTCTCCAATTCATATGTGTACAAGTATTACATTGTTTTTCTCTAAATATGTGCAC                 ]
[+] EMBL AK104010             [                                       CCCTTCTCCCCCAGCCAGAGGCAGAGGCTCCCGCGACCTCGTCGGCGACGGCGACCGCGACCGCGCGACGACGAGGAAGCGAAGGACGAGGAAGCGAGCGCGCCACCATCTTCATAGCTCGCTCTCCTCCTCACCTCAGGTGGTGAACCGAGGAGACCTGCGTGGGGTGGGGGATGGAGGAGGAGGAGGCGGGTGT GAGGGAGCGCCGCGGCGTGCTCAAGGTGGTGGTGGCCAGCGGGACCAACCTCGCCGTCCGGGACTTCACCTCCAGCGACCCCTACGTCGTCGTCCGCCTCGCCGCCATGAATAAGAAGACAAAAGTCATCAACAGCTGCCTAAACCCAGTTTGGAACGAAGAGATGTCCTTCTCCATCGAAGAACCAGCAGGGGTCATCAAATTCGAGGTGTTCGACTGGGACCGGTTCAAGTACGACGATAAAATGGGGCACGCGTTTCTTGAGCTGCAGCCGGTGGCCGCGGCGGCGAAGCTGCGGCGTGCGCTGCGGCTGACGACGGGGGAGACCAAGCTCCGGAAGGTTGCCGCCAGCGTCGACAACTGCCTCATGTGCGACAGCTTCGTGACGTACGCCGACGGTGAGATCGTGCTCGACGCCAGGCTGCGGCTGCGCGACGTCGAGTCCGGCGAGCTGTTCGTCACTGTCAAGTGGATCGATGCGAACGCCAAGTGAGAAAATGGGACTCCGTGTGAATGCTGTCTGATCTAAATCTGAAATTTCCAGACAGTTCTAACAGGCATAGTATTAGCGTGTGCGTGCATGTTCAGAATGTTTTTGTGCTTTTCTTTTTTAATGAACGATCGGGAAAGTAGGAAACTCTAATTATTGTTTGGAAATAGGAACGCAATGTGTTCTCCCCACTCTTTTTAGCCCATTCTAGAGATAAGTACCCTTTTTCTCCAATTCATATGTGTACAAGTA                                              ]
[-] EMBL CF295740             [                                                                                                                                                                                                                                                                                                                                                                                                                                             GTCATCAAATTCGAGGTGTTCGACTGGGACCGGTTCAAGTACGACGATAAAATGGGGCACGCGTTTCTTGAGCTGCAGCCGGTGGCCGCGGCGGCGAAGCTGCGGCGTGCGCTGCGGCTGACGACGGGGGAGACCAAGCTCCGGAAGGTTGCCGCCAGCGTCGACAACTGCCTCATGTGCGACAGCTTCGTGACGTACGCCGACGGTGAGATCGTGCTCGACGCCAGGCTGCGGCTGCGCGACGTCGAGTCCGGCGAGCTGTTCGTCACTGTCAAGTGGATCGATGCGAACGCCAAGTGAGAAAATGGGACTCCGTGTGAATGCTGTCTGATCTAAATCTGAAATTTCCAGACAGTTTTAACAGGCATAGTATTAGCGTGTGCGTGCATGTTCAGAATGTTTTTGTGCTTTTCTTTTTTAAAGAACGATCGGGAAAGTAGGAAACTCTAATTATTGTTTGGAAATAGGAACGCAATGTGTTCTCCCCACTCTTTTTAGCCCATTTTAGAGATAAGTACCCTTTTTCTCCAATTCATATGTGTACAAGTATTACATTGTTTTTCTCTAAATATGTGCACCATTCATGTGAAAAAAA]
[-] EMBL CF335973             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         acGGGGAGACCAAGCTCC GAAGGTTGCCGCCAGCGTCGACAACTG CTCATGTGCGACAGCTTCGTGACGTACGCCGACGGTGAGATCGTGCTCGACGCCAGGCTGCGGCTGCGCGACGTCGAGTCCGGCGAGCTGTTCGTCACTGTCAAGTGGATCGATGCGAACGCCAAGTGAGAAAATGGGACTCCGTGTGAATGCTGTCTGATCTAAATCTGAAATTTCCAGACAGTTCTAACAGGCATAGTATTAGCGTGTGCGTGCATGTTCAGAATGTTTTTGTGCTTTTCTTTTTTAATGAACGATCGGGAAAGTAGGAAACTCTAATTATTGTTTGGAAATAGGAACGCAATGTGTTCTCCCCACTCTTTTTAGCCCATTCTAGAGATAAGTACCCTTTTTCTCCAATTCATATGTGTACAAGTATTACATTGTTTTTCTCTAAATATGTGCACCATTCATG GAAAAAA ]
[-] EMBL CF297345             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGCTCGACGCCAGGCTGCGGCTGCGCGACGTCGAAGCCGGCGAGCTGTTCGTCACTGTCAAGTGGATCGATGCGAACGCCAAGTGAGAAAATGGGACTCCGTGTGAATGCTGTCTGATCTAAATCTGAAATTTCCAGACAGTTCTAACAGGCATAGTATTAGCGTGTGCGTGCATGTTCAGAATGTTTTTGTGCTTTTCTTTTTTAATGAACGATCGGGAAAGTAGGAAACTCTAATTATTGTTTGGAAATAGGAACGCAATGTGTTCTCCCCACTCTTTTTAGCCCATTCTAGAGATAAGTACCCTTTTTCTCCAATTCATATGTGTACAAGTAT                                             ]




>consensus_11812#0
GGAGTAGAAACTTCCCACTCTCTCTCTCCCATTCCATTTCCCTTCTCCCCCAGCCAGAGG
CAGAGGCTCCCGCGACCTCGTCGGCGACGGCGACCGCGACCGCGCGACGACGAGGAAGCG
AAGGACGAGGAAGCGAGCGCGCCACCATCTTCATAGCTCGCTCTCCTCCTCACCTCAGGT
GGTGAACCGAGGAGACCTGCGTGGGGTGGGGGATGGAGGAGGAGGAGGCGGGTGTGAGGG
ANCGCCGCGGCGTGCTCAAGGTGGTGGTGGCCAGCGGGACCAACCTCGCCGTCCGGGACT
TCACCTCCAGCGACCCCTACGTCGTCGTCCGCCTCGCCGCCATGAATAAGAAGACAAAAG
TCATCAACAGCTGCCTAAACCCAGTTTGGAACGAAGAGATGTCCTTCTCCATCGAAGAAC
CAGCAGGGGTCATCAAATTCGAGGTGTTCGACTGGGACCGGTTCAAGTACGACGATAAAA
TGGGGCACGCGTTTCTTGAGCTGCAGCCGGTGGCCGCGGCGGCGAAGCTGCGGCGTGCGC
TGCGGCTGACGACGGGGGAGACCAAGCTCCGGAAGGTTGCCGCCAGCGTCGACAACTGCC
TCATGTGCGACAGCTTCGTGACGTACGCCGACGGTGAGATCGTGCTCGACGCCAGGCTGC
GGCTGCGCGACGTCGAGTCCGGCGAGCTGTTCGTCACTGTCAAGTGGATCGATGCGAACG
CCAAGTGAGAAAATGGGACTCCGTGTGAATGCTGTCTGATCTAAATCTGAAATTTCCAGA
CAGTTCTAACAGGCATAGTATTAGCGTGTGCGTGCATGTTCAGAATGTTTTTGTGCTTTT
CTTTTTTAATGAACGATCGGGAAAGTAGGAAACTCTAATTATTGTTTGGAAATAGGAACG
CAATGTGTTCTCCCCACTCTTTTTAGCCCATTCTAGAGATAAGTACCCTTTTTCTCCAAT
TCATATGTGTACAAGTATTACATTGTTTTTCTCTAAATATGTGCACCATTCATGGAAAAA
AA
clustalw multiple alignements is not computed in this case