|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11818#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1283 fasta sequence
[AGAGGAGAAGGACTCCATTGGCGACAAGCTAAGCTTAGCTATAGCTATAGCTAGCTAGCTTAGCCCCTGCCTTCCAAGGAGGAAGAAACGAGGCATACATACCCATCCCCTCCTCCTCGACGGCTAGCTGCTACCTCGTCTGATCGATCGATCGATCTCCTCGTCGGCCATGGCGCTTTGCATTTATGCAGCAGCAGCAGAAGAAGAACGCGCACGTGCCGAAATTCGGCAACTGGGACAATGGCGGCAACGTGCCGTACACCGTCTACTTCGAGAACGCGCGCAAGGGCAAGGTCGCCGCCGCCGGCAAGATGTTCAACCCCAACGACCCCGTCGACAACCCGGAGGCCTTCTCCTCCTCCATCGCCGCGCCATCGCCGAGCCGAGCCCCTCCTCCTCCGCCGTCCCACCACGAGCGCGCCCCGAGCGACGCGCCGCCGCCGCCGCCGCCGGCCCCCTACGCCGGCGGCTCGCCGTACCACCGCCACGCCGCTGGTGGTGGCGAGACGCCGCCGGCAAGAAGAGGAGGCGGGCGGACAAGCGGCGGCGGCGGGTCGTCGTACAGCGTCGAGCACTCGCCGTCGCCGTCGCCGCTGCACCCCTACTCCGACAGCGGGAGCGGCAGCTACGGCGGCGGCCTCGTCGCCAACTCCCGCGCCAAGGGCGGCGGCGGCGGCGCCCCGCGCGGCAACGAGACACCGACGAGGGGGTCGGCGGTGCCGCGGTTCGGCGACTGGGACTCGAACCCGGCGTCGGCGGACGGCTACACGCACATCTTCAACAAGGTGAGGGAGGAGAAGCAGACCGGCCAGGCCGCCGGGAAGCCGGCGGCGGGGCTCGGCAAGGGCGGCGCCGCCGCCGCCGGCCACGGCAACGCCGCCAAGCGATACCACGACGACGACTTCGC-CTCCACGAAGTGCTCCTGCTTTGGATGGTGCAAATAGAGATGGATTTCGAGGC-TGTTATC-AATGTACTTGTAAATTGCAGAGAATGGGATTTTCGTTTCCCCAGTGCGATTCATCAGCTTCGAAACTGCATTTGGTCATAGATTATTTATTTGGAAGTGGGGAAATATACATTAC-AGTATAGTTCATGCCTGCTGTAATGGTAGATTACGTATTGGATTGTTTGGTTCCTTCTGTACTGGATTTACATGCTTGTAATGGCAGGTTAAAGCTTGGGCTGTTTCTTGTTCTTATCGTCATTTAATTTGTCCCTTGTCAACACAGAAAGTCCATTATGCACGTATTAATCTATGAAACTAGATTTCTGGTAAAAAAAAA]
[+] EMBL AK120803 [AGAGGAGAAGGACTCCATTGGCGACAAGCTAAGCTTAGCTATAGCTATAGCTAGCTAGCTTAGCCCCTGCCTTCCAAGGAGGAAGAAACGAGGCATACATACCCATCCCCTCCTCCTCGACGGCTAGCTGCTACCTCGTCTGATCGATCGATCGATCTCCTCGTCGGCCATGGCGCTTTGCATTTATGCAGCAGCAGCAGAAGAAGAACGCGCACGTGCCGAAATTCGGCAACTGGGACAATGGCGGCAACGTGCCGTACACCGTCTACTTCGAGAACGCGCGCAAGGGCAAGGTCGCCGCCGCCGGCAAGATGTTCAACCCCAACGACCCCGTCGACAACCCGGAGGCCTTCTCCTCCTCCATCGCCGCGCCATCGCCGAGCCGAGCCCCTCCTCCTCCGCCGTCCCACCACGAGCGCGCCCCGAGCGACGCGCCGCCGCCGCCGCCGCCGGCCCCCTACGCCGGCGGCTCGCCGTACCACCGCCACGCCGCTGGTGGTGGCGAGACGCCGCCGGCAAGAAGAGGAGGCGGGCGGACAAGCGGCGGCGGCGGGTCGTCGTACAGCGTCGAGCACTCGCCGTCGCCGTCGCCGCTGCACCCCTACTCCGACAGCGGGAGCGGCAGCTACGGCGGCGGCCTCGTCGCCAACTCCCGCGCCAAGGGCGGCGGCGGCGGCGCCCCGCGCGGCAACGAGACACCGACGAGGGGGTCGGCGGTGCCGCGGTTCGGCGACTGGGACTCGAACCCGGCGTCGGCGGACGGCTACACGCACATCTTCAACAAGGTGAGGGAGGAGAAGCAGACCGGCCAGGCCGCCGGGAAGCCGGCGGCGGGGCTCGGCAAGGGCGGCGCCGCCGCCGCCGGCCACGGCAACGCCGCCAAGCGATACCACGACGACGACTTCGC CTCCACGAAGTGCTCCTGCTTTGGATGGTGCAAATAGAGATGGATTTTGAGGC TGTTATC AATGTACTTGTAAATTGCAGAGAATGGGATTTTCGTTTCCCCAGTGCGATTCATCAGCTTCGAAACTGCATTTGGTCATAGATTATTTATTTGGAAGTGGGGAAATATACATTAC AGTATAGTTCATGCCTGCTGTAATGGTAGATTACGTATTGGATTGTTTGGTTCCTTCTGTACTGGATTTACATGCTTGTAATGGCAGGTTAAAGCTTGGGCTGTTTCTTGTTCTTATCGTCATTTAATTTGTCCCTTGTCAACACAGAAAGTCCATTATGCACGTATTAATCTATGAAACTA ]
[+] EMBL BQ908124 [ CGCCGGGAAGCCGGCGGCGGGGCTCGGCAAGGGCGGCGCCGCCGCCGCCGGCCACGGCAACGCCGCCAAGCGATACCACGACGACGACTTCGC CTCCACGAAGTGCTCCTGCTTTGGATGGTGCAAATAGAGATGGATTTCGAGGC TGTTATC AATGTACTTGTAAATTGCAGAGAATGGGATTTTCGTTTCCCCAGTGCGATTCATCAGCTTCGAAACTGCATTTGGTCATAGATTATTTATTTGGAAGTGGGGAAATATACATTAC AGTATAGTTCANGCCTGCTGTAATGGTAGATTACGTATTGGATTGTTTGGTTCCTTCTGTACTGGATTTACATGCTTGTAATGGCAGGTTAAAGCTTGGGCTGTTTCTTGTTCTTATCGTCATTTAATTTGTCCCTTGTCAACACAGAAAGTCCATTATGCACGTATTAATCTATGAAACTAGATTTCTGGTAAAAAAAAA]
[+] EMBL BI813184 [ acCGACGACGACTTCGCACTCCACGAAGTGCTCCTGCTTTGGATGGTGCAAATAGAGATGGATTTCGAGGCATGTTATCAAATGTACTTGTAAATTGCAGAGAATGGGATTTTCGTTTCCCCAGTGCGATTCATCAGCTTCGAAACTGCATTTGGTCATAGATTATTTATTTGGAAGTGGGGAAATATACATTACAAGTATAGTTCATGCCTGCTGTAATGGTAGATTACGTATTGGATTGTTTGGTTCCTTCTGTACTGGATTTACATGCTTGTAATGGCAGGTTAAAGCTTGGGCTGTTTCTTGTTCTaaaaa ]
consensusID : consensus_11818#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 749 fasta sequence
[AGGACTCCATTGGCGACAAGCTAAGCTTAGC-TATAGCTATAGCTAGCTAGCTTAGCCC-CTGCCTTCCAAGGAGGAAGAAACGAGGCATACATACCCATCCCCTCCTCCTCGACGGCTAGCTGCTACCTCGTCTGATCGATCGATCGATCTCCTCGTCGGCCATGGCGCA-NAGCAGAAGAAGAACGCGCACGTGCCGAAATTCGGCAACTGGGACAATGGCGGCAACGTGCCGTACACCGTCTACTTCGAGAACGCGCGCAAGGGCAAGGTCGCCGCCGCCGGCAAGATGTTCAACCCCAACGACCCCGTCGACAACCCGGAGGCCTTCTCCTCCTCCATCGCCGCGCCATCGCCGAGCCGAGCCCCTCCTCCTCCGCCGTCCCACCACGAGCGCGCCCCGAGCGACGCGCCGCCGCCGCCGCCGCCGGCCCCCTACGCCGGCGGCTCGCCGTACCACCGCCACGCCGCTGGTGGTGGCGAGACGCCGCCGGCAAGAAGAGGAGGCGGGCGGACAAGCGGCGGCGGCGGGTCGTCGTACAGCGTCGAGCACTCGCCGTCGCCGTCGCCGCTGCACCCCTACTCCGACAGCGGGAGCGGCAGCTACGGCGGCGGCCTCGTCGCCAACTCCCGCGCCAAGGGCGGCGGCGGCGGCGCCCCGCGCGGCAACGAGACACCGACGAGGGGGTCGGCGGTGCCGCGGTTCGGCGACTGGGACTCGAACCCGGCGTCGGCGGACGGCTACACGCACA]
[+] EMBL C26604 [AGGACTCCATTGGCGACAAGCTAAGCTTAGC TATAGCTATAGCTAGCTAGCTTAGCCC CTGCCTTCCAAGGAGGAAGAAACGAGGCATACATACCCATCCCCTCCTCCTCGACGGCTAGCTGCTACCTCGTCTGATCGATCGATCGATCTCCTCGTCGGCCATGGCGCA NAGCAGAAGAAGAACGCGCACGTGCCGAAATTCGGCAACTGGGACAATGGCGGCAACGTGCCGTACACCGTCTACTTCGAGAACGCGCGCAAGGGCAAGGTCGCCATCGNCGagccgagc ]
[+] EMBL OSS11887A [ GGACTCCATTGGCGACAAGCTAAGCTTAGC TATAGCTATAGCTAGCTAGCTTAGCCC CTGCCTTCCAAGGAGGAAGAAACGAGGCATACATACCCATCCCCTCCTCCTCGACGGCTAGCTGCTACCTCGTCTGATCGATCGATCGATCTCCTCGTCGGCCATGGCGCA NAGCAGAAGAAGAACGCGCACGTGCCGAAATTCGGCAACTGGGACAATGGCGGCAACGTGCCGTACACCGTCTACTTCGAGAACGCGCGCAAGGGCAAGGTCGCCGCCGCCGGCAAGATGTTCAACCCCAACGACCCCGTCGACAACCCGGAGGCCTTCTTCTCC ]
[+] EMBL CB652113 [ CGACAAGCCATTCTTAGC TATAGCTATAGCTAGCTAGCTTAGCCC CTGCCTTCCAAGGAGGAAGAAACGAGGCATACATACCCATCCCCTCCTCCTCGACGGCTAGCTGCTACCTCGTCTGATCGATCGATCGATCTCCTCGTCGGCCATGGCGCAGCAGCAGAAGAAGAACGCGCACGTGCCGAAATTCGGCAACTGGGACAATGGCGGCAACGTGCCGTACACCGTCTACTTCGAGAACGCGCGCAAGGGCAAGGTCGCCGCCGCCGGCAAGATGTTCAACCCCAACGACCCCGTCGACAACCCGGAGGCCTTCTCCTCCTCCATCGCCGCGCCATCGCCGAGCCGAGCCCCTCCTCCTCCGCCGTCCCACCACGAGCGCGCCCCGAGCGACGCGCCGCCGCCGCCGCCGCCGGCCCCCTACGCCGGCGGCTCGCCGTACCACCGCCACGCCGCTGGTGGTGGCGAGACGCCGCCGGCAAGAAGAGGAGGCGGGCGGACAAGCGGCGGCGGCGGGTCGTCGTACAGCGTCGAGCACTCGCCGTCGCCGTCGCCGCTGCACCCCTACTCCGACAGCGGGAGCGGCAGCTACGGCGGCGGCCTCGTCGCCAACTCCCGCGCCAAGGGCGGCGGCGGCGGCGCCCCGCGCGGCAACGAGACACCGACGAGGGGGTCGGCGGTGCCGCGGTTCGGCGACTGGGACTCGAACCCGGCGTCGGCGGACGGCTACACGCACA]
[+] EMBL CB681202 [ ACAAGCCATTCTTAGCATGTAGCTATAGCTAGCTAGCGTACCCCACTGCCTTCCAAGGAGGAAGAAACGAGGCATACGTACCCATCCCCTCCTCCTCGACGGCTAGCTGCTACCTCGTCTGATCGATCGATCGATCTCCTCGTCGGCCATGGCGCAGCAGCAGAAGAAAAACGCGCACGTGCCGAAATTCGGCAACTGGGACAATGGCGGCAACGTGCCGTACACCGTCTACTTCGAGAACGCGCGCAAGGGCAAGGTCGCCGCCGGCGGCAAGATGTTCAACCCCAACGACCCCGGCGACAACCCGGAGGCCTTCTCCTCCTCCATCGCCGCGCCATCGCCGAGCCGAGCCCCTCCTCCTCCGCCGTCCCACCACGAGCGCGCCCCGAGCGACGCGCCGCCGCCGCCGCCGCCGGCCCCCTACGCCGGCGGCTCGCCGTACCACCGCCACGCCGCTGGTGGTGGCGAGACGCCGCCGGCAAGAAGAGGAGGCGGGCGGACAAGCGGCGGCGGCGGGTCGTCGTACAGCGTCGAGCACTCGCCGTCGCCGTCGCCGCTGCACCCCTACTCCGACAGCGGGAGCGGCAGCTACGGCGGCGGCCTCGTCGCCAACTCCCGCGCCAAGGGCGGCGGCGGCGGCGCCCCGCGCGGCAACGAGACACCGACGAGGGGGTCGGCGGTGCCGCGGNTCGGCGACTGGGACTCGAACCCGGCGTCG ]
consensusID : consensus_11818#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 466 fasta sequence
[CCCGGGTTGGGGGCCGGGGTACACGCCGATGTTGAGTAACTTGAGGGACGATAAGCATGCCGCGCAGGCGGCGGAGAAGCTGGCGTCGGGGATGGCCAAGGGAGGGAGCAGCAGCCGCCGGCCACGGCAACGCCGCCAAGCGATACCACGACGATGACTTCGCCTCCACGAAGTGCTCCTGCTTTGGATGGTGCAAATAGAGATGGATTTTGAGGCTGTTATCAATGTACTTGTAAATTGCAGAGAATGGGATTTTCGTTTCCCCAGTGCGATTCATCAGCTTCGAAACTGCATTTGGTCATAGATTATTTATTTGGAAGTGGGGAAATATACATTACAGTATAGTTCATGCCTGCTGTAATGGTAGATTACGTATTGGATTGTTTGGTTCCTTCTGTACTGGATTTACATGCTTGTAATGGCAGGTTAAAGCTTGGGCTGTTTCTTGTTCTTACAAATAAAAGGG]
[-] EMBL CB681203 [CCCGGGTTGGGGGCCGGGGTACACGCCGATGTTGAGTAACTTGAGGGACGATAAGCATGCCGCGCAGGCGGCGGAGAAGCTGGCGTCGGGGATGGCCAAGGGAGGGAGCAGCAGCCGCCGGCCACGGCAACGCCGCCAAGCGATACCACGACGATGACTTCGCCTCCACGAAGTGCTCCTGCTTTGGATGGTGCAAATAGAGATGGATTTTGAGGCTGTTATCAATGTACTTGTAAATTGCAGAGAATGGGATTTTCGTTTCCCCAGTGCGATTCATCAGCTTCGAAACTGCATTTGGTCATAGATTATTTATTTGGAAGTGGGGAAATATACATTACAGTATAGTTCATGCCTGCTGTAATGGTAGATTACGTATTGGATTGTTTGGTTCCTTCTGTACTGGATTTACATGCTTGTAATGGCAGGTTAAAGCTTGGGCTGTTTCTTGTTCTTACAAATAAAAGGG]
consensusID : consensus_11818#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 409 fasta sequence
[AGGATAAGCAGACCGGCCAGGCCGCCGGGAAGCCGGCGGCGGGGCTCGGCAAGGGCGGCGCCGCCGCCGCCGGCCACGGCAACTCCGCCGAGCGATACCACGACTACGACTTCGCCTCCACTAAGTGCTCCTGCTTTGGATGGTGCAAATATAGATGGATTTTGAGGCTGTTATCAATGTACTTGTAAATTGCAGAGAATGGGATTTTCGTTTCCCCACGTCTATTCTTCAGCTTCCAAACTGCATTTGGTCTTATATTATTTATTTGGAAGTGGGGAAATATACATTACAGTATACTTCATGCCTGCTGTAATGGTACATTACTTATTGGATTGTTTGGTTCCTTCTGTACTGGATTTACATGCTTGTAATGGCAGGTTAAAGCTTGGGCTGTTTCTCTGCAAACCAG]
[+] EMBL CB679378 [AGGATAAGCAGACCGGCCAGGCCGCCGGGAAGCCGGCGGCGGGGCTCGGCAAGGGCGGCGCCGCCGCCGCCGGCCACGGCAACTCCGCCGAGCGATACCACGACTACGACTTCGCCTCCACTAAGTGCTCCTGCTTTGGATGGTGCAAATATAGATGGATTTTGAGGCTGTTATCAATGTACTTGTAAATTGCAGAGAATGGGATTTTCGTTTCCCCACGTCTATTCTTCAGCTTCCAAACTGCATTTGGTCTTATATTATTTATTTGGAAGTGGGGAAATATACATTACAGTATACTTCATGCCTGCTGTAATGGTACATTACTTATTGGATTGTTTGGTTCCTTCTGTACTGGATTTACATGCTTGTAATGGCAGGTTAAAGCTTGGGCTGTTTCTCTGCAAACCAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11818#2 ------------------------------------------------------------
consensus_11818#3 ------------------------------------------------------------
consensus_11818#0 AGAGGAGAAGGACTCCATTGGCGACAAGCTAAGCTTAGCTATAGCTATAGCTAGCTAGCT 60
consensus_11818#1 ------------------------------------------------------------
consensus_11818#2 ------------------------------------------------------------
consensus_11818#3 ------------------------------------------------------------
consensus_11818#0 TAGCCCCTGCCTTCCAAGGAGGAAGAAACGAGGCATACATACCCATCCCCTCCTCCTCGA 120
consensus_11818#1 ------------------------------------------------------------
consensus_11818#2 ------------------------------------------------------------
consensus_11818#3 ------------------------------------------------------------
consensus_11818#0 CGGCTAGCTGCTACCTCGTCTGATCGATCGATCGATCTCCTCGTCGGCCATGGCGCTTTG 180
consensus_11818#1 ------------------------------------------------------------
consensus_11818#2 ------------------------------------------------------------
consensus_11818#3 ------------------------------------------------------------
consensus_11818#0 CATTTATGCAGCAGCAGCAGAAGAAGAACGCGCACGTGCCGAAATTCGGCAACTGGGACA 240
consensus_11818#1 ------------------------------------------------------------
consensus_11818#2 ------------------------------------------------------------
consensus_11818#3 ------------------------------------------------------------
consensus_11818#0 ATGGCGGCAACGTGCCGTACACCGTCTACTTCGAGAACGCGCGCAAGGGCAAGGTCGCCG 300
consensus_11818#1 ------------------------------------------------------------
consensus_11818#2 ------------------------------------------------------------
consensus_11818#3 ------------------------------------------------------------
consensus_11818#0 CCGCCGGCAAGATGTTCAACCCCAACGACCCCGTCGACAACCCGGAGGCCTTCTCCTCCT 360
consensus_11818#1 ------------------------------------------------------------
consensus_11818#2 ------------------------------------------------------------
consensus_11818#3 ------------------------------------------------------------
consensus_11818#0 CCATCGCCGCGCCATCGCCGAGCCGAGCCCCTCCTCCTCCGCCGTCCCACCACGAGCGCG 420
consensus_11818#1 ------------------------------------------------------------
consensus_11818#2 ------------------------------------------------------------
consensus_11818#3 ------------------------------------------------------------
consensus_11818#0 CCCCGAGCGACGCGCCGCCGCCGCCGCCGCCGGCCCCCTACGCCGGCGGCTCGCCGTACC 480
consensus_11818#1 ------------------------------------------------------------
consensus_11818#2 ------------------------------------------------------------
consensus_11818#3 ------------------------------------------------------------
consensus_11818#0 ACCGCCACGCCGCTGGTGGTGGCGAGACGCCGCCGGCAAGAAGAGGAGGCGGGCGGACAA 540
consensus_11818#1 ------------------------------------------------------------
consensus_11818#2 ------------------------------------------------------------
consensus_11818#3 ------------------------------------------------------------
consensus_11818#0 GCGGCGGCGGCGGGTCGTCGTACAGCGTCGAGCACTCGCCGTCGCCGTCGCCGCTGCACC 600
consensus_11818#1 ----------------------------------------------AGGACTCCATTGGC 14
consensus_11818#2 ------------------------------------------------------------
consensus_11818#3 ------------------------------------------------------------
consensus_11818#0 CCTACTCCGACAGCGGGAGCGGCAGCTACGGCGGCGGCCTCGTCGCCAACTCCCGCGCCA 660
consensus_11818#1 GACAAGCTAAGCTTAGCTATAGCTATAGCTAGCTAGCTTAGCCCCTGCCTTCCAAGGAGG 74
consensus_11818#2 ------------------------------------------------------------
consensus_11818#3 ------------------------------------------------------------
consensus_11818#0 AGGGCGGCGGCGGCGGCGCCCCGCGCGGCAACGAGACACCGACGAGGGGGTCGGCGGTGC 720
consensus_11818#1 AAGAAACGAGGCATACATACCCATCCCCTCCTCCTCGACGGCTAGCTGCTACCTCGTCTG 134
consensus_11818#2 -------------------------CCCGGGTTGGGGGCCGGGGTACACGCCGATGTTGA 35
consensus_11818#3 ------------------------------------------------------------
consensus_11818#0 CGCGGTTCGGCGACTGGGACTCGAACCCGGCGTCGGCGGACGGCTACACGCACATCTTCA 780
consensus_11818#1 ATCGATCGATCGATCTCCTCGTCGGCCATGGCGCANAGCAGAAGAAGAACGCGCACGTGC 194
consensus_11818#2 GTAACTTGAGGGACGATAAGCATGCCGCGCAGGCGGCGGAGAA-GCTGGCGTCGGGGATG 94
consensus_11818#3 ------------AGGATAAGCAGACCGGCCAGGCCGCCGGGAA-GCCGGCGGCGGGGCTC 47
consensus_11818#0 ACAAGGTGAGGGAGGAGAAGCAGACCGGCCAGGCCGCCGGGAA-GCCGGCGGCGGGGCTC 839
consensus_11818#1 CGAAATTCGGCAACTGGGACAATGGCGGCAACGTGCCGTACACCGTCTACTTCGAGAACG 254
* * * ** * * * * * * ** *
consensus_11818#2 GCC--AAGGGAGGGAGCAGCAGCCGCCGGCCACGG---CAACGCCGCCAAGCGATACCAC 149
consensus_11818#3 GGC--AAGGGCGGC-GCCGCCGCCGCCGGCCACGG---CAACTCCGCCGAGCGATACCAC 101
consensus_11818#0 GGC--AAGGGCGGC-GCCGCCGCCGCCGGCCACGG---CAACGCCGCCAAGCGATACCAC 893
consensus_11818#1 CGCGCAAGGGCAAG-GTCGCCGCCGCCGGCAAGATGTTCAACCCCAACGACCCCGTCGAC 313
* ***** * ** ********* * **** ** * * * * **
consensus_11818#2 GAC---GATGACTTCGCCTCCACGA--AGTGCTCCTGCTTTGGATGGTGCAAATAGAGAT 204
consensus_11818#3 GAC---TACGACTTCGCCTCCACTA--AGTGCTCCTGCTTTGGATGGTGCAAATATAGAT 156
consensus_11818#0 GAC---GACGACTTCGCCTCCACGA--AGTGCTCCTGCTTTGGATGGTGCAAATAGAGAT 948
consensus_11818#1 AACCCGGAGGCCTTCTCCTCCTCCATCGCCGCGCCATCGCCGAGCCGAGCCCCTCCTCCT 373
** * * **** ***** * * ** ** * * * ** * *
consensus_11818#2 GGATTTTGAGGCTGTTATCAATGTACTTGTAAATTGCAGAGAATGGGATTTTCGTTTCCC 264
consensus_11818#3 GGATTTTGAGGCTGTTATCAATGTACTTGTAAATTGCAGAGAATGGGATTTTCGTTTCCC 216
consensus_11818#0 GGATTTCGAGGCTGTTATCAATGTACTTGTAAATTGCAGAGAATGGGATTTTCGTTTCCC 1008
consensus_11818#1 CCGCCGTCCCACCACGAGCGCGCCCCGAGCGACGCGCCGCCGCCGCCGCCGCCGGCCCCC 433
* * * * * * ** * * ** ***
consensus_11818#2 CAGTGCGATTCATCAGCTTCGAAACTGCAT----TTGGTCATAG-ATTATTTATTTGGAA 319
consensus_11818#3 CACGTCTATTCTTCAGCTTCCAAACTGCAT----TTGGTCTTAT-ATTATTTATTTGGAA 271
consensus_11818#0 CAGTGCGATTCATCAGCTTCGAAACTGCAT----TTGGTCATAG-ATTATTTATTTGGAA 1063
consensus_11818#1 TACGCCGGCGGCTCGCCGTACCACCGCCACGCCGCTGGTGGTGGCGAGACGCCGCCGGCA 493
* * ** * * * * ** **** * * ** *
consensus_11818#2 GTGGGGAAATATACATTACAGTATAGTTCATGCCTGCTGTAATGGTAGATTACGTATTGG 379
consensus_11818#3 GTGGGGAAATATACATTACAGTATACTTCATGCCTGCTGTAATGGTACATTACTTATTGG 331
consensus_11818#0 GTGGGGAAATATACATTACAGTATAGTTCATGCCTGCTGTAATGGTAGATTACGTATTGG 1123
consensus_11818#1 AGAAGAGGAGGCGGGCGGACAAGCGGCGGCGGCGGGTCGTCGTACAGCGTCGAGCACTCG 553
* * ** * ** * * * * *
consensus_11818#2 ATTGTTTGGTTCCTTCTGTACTGG-ATTTACATGCTTGTAATGGCAGGTTAAAGCTTGGG 438
consensus_11818#3 ATTGTTTGGTTCCTTCTGTACTGG-ATTTACATGCTTGTAATGGCAGGTTAAAGCTTGGG 390
consensus_11818#0 ATTGTTTGGTTCCTTCTGTACTGG-ATTTACATGCTTGTAATGGCAGGTTAAAGCTTGGG 1182
consensus_11818#1 CCGTCGCCGTCGCCGCTGCACCCCTACTCCGACAGCGGGAGCGGCAG-CTACGGCGGCGG 612
** * *** ** * * * * * ***** ** ** **
consensus_11818#2 CTGTTTCTTGTTCTTACAAATAAAAGGG-------------------------------- 466
consensus_11818#3 CTGTTTCTC-----TGCAAACCAG------------------------------------ 409
consensus_11818#0 CTGTTTCTTGTTCTTATCGTCATTTAATTTGTCCCTTGTCAACACAGAAAGTCCATTATG 1242
consensus_11818#1 CCTCGTCGCCAACTCCCGCGCCAAGGGCGGCGGCGGCGGCGCCCCGCGCGGCAACGAGAC 672
* **
consensus_11818#2 ------------------------------------------------------------
consensus_11818#3 ------------------------------------------------------------
consensus_11818#0 CACGTATTAATCTATGAAACTAGATTTCTGGTAAAAAAAAA------------------- 1283
consensus_11818#1 ACCGACGAGGGGGTCGGCGGTGCCGCGGTTCGGCGACTGGGACTCGAACCCGGCGTCGGC 732
consensus_11818#2 -----------------
consensus_11818#3 -----------------
consensus_11818#0 -----------------
consensus_11818#1 GGACGGCTACACGCACA 749
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||