cluster # 11829

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Oryza sativa
cluster # 11829 cluster # 11829 Sequences # 9 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11829#0 length = 2801 sequences # 8

consensus_11829#1 length = 496 sequences # 1

consensusID : consensus_11829#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2801
fasta sequence

                              [CTCCTCCTCCATTTCCATTTGCATCACCACCTCCTCCTCCTCTTCTCCGAACCCTAATTCCGACGAGCGGTGGTGGTGCTAGCGAGCGAGCTTGATCTCCATGCGTCGGCGCTAGCTCCACCGGCGGCCATGCCTCACCGACGACGCCTGCTTAACCCGGCGCCGTCACTGCCGCCGCCGCCGGCTGCTGCTCCGGCCGGCTTCCACCACCACCTCCTCGCCGTCGACGACACGCGGCTGCCGCTGCTCGCCGACTACGCGCTGCTGCAGGGCGACGCCGCGGCGGCGCCGGCGTCCGCGGAGTGGAGCGCCGGGAGCGGGTTCACCGGCATCTCCACCGACCCGGCCACCGCCACCACCGCCACGACGGCGTCCACCGCCACGGCGCCGGGATCGGCGTCGAACCTGACGGCGGCGACCGCCGGAGGAGGAGGGAGGGAGACGTGGGTCCGCCGCGCCAGGGAGGGCTACTACCTCCAGCTCTCCCTCGCCATCCGCCTAACCTCCGAGGCCTTCCTCGCCGGCGTCCCGCCCGAGCTCCTCATCGGCTGCGGCGGCGGCGGCGAAGCCGAGAACCACGCCGACGTCGCGGCCGATGCCGCCGCTGTCTCCTACCGGCTCTGGGTGAACGGGTGCTTGTCGTGGGGGGACAAGATCGCGCACGGGTTCTACAACATCCTGGGGGTGGACCCGCACGTGTGGGCGATGTGCAACGCTGCGGCGGAGGACGGCCGGCGGCTGCCGACGCTGGTGGCGCTCCGGGCGGTGGACAGCGGCGAGTCGTCGGTGCTGGAGGTGGTGCTCGTCGACAAGTGCGGCGACCCAGCGCTCGCCGACCTCGAGCGCCGGGCCCTCGACCTCTACCGCGCCGCCGGCGTCTCCCTCGACCTCGTCCGCCACCTCGCCGTCCTCGTCTCCGACCACATGGGGGGCGCGTTGCGGTCGGAGGACGGGGACCTGTTCATGCGGTGGAAGGCGGTGAGCAAGCAGCTGAGGAAGCGGCACAGGTGCGTCGTCGTCCCCATCGGCAGCCTCTCCATCGGCTTCTGCCGCCACCGCGCCATCCTCTTCAAGAGCCTCGCCGACTTCATCGGCCTTCCCTGCCGGATCGCGCAGGGCTGCAAGTACTGCTCCGCGCCGCACCGCTCGTCCTGCCTCGTCAAGATCGACAACGAGAGAAGGTTTGTAAGGGAGTACGTCGTCGACCTCGTCGTTGAGCCGGGAAGACTCAGCAGTCCAGACTCGTCTATCAATGGCCAGTTGCTCTCCTCCGTGCCTTCACCTTTCAAGACCTCATGTACAATGAGTTCTGCAAACTATGCAACACCGGCTGCTTCGTGGAATCGCGCGATATCTGGAGATCGTCGCAACTCGATACTGTCAAATCCTCAGTATTCAGTTGCTAAGTACTGTGTTGCCGAGGAGAAGAGCTCTGTTCAGGTAGCCACCAAAGAAGCCATGCTGCCAAAATGCGGTCAGATCACGCAGAACGGCAACTGCAACAAGAACAGTATGGCAGTGTTCGAAGTGTCGAAGCAGATGAAGGCGATGGAGATCAGTTCTGAGAGTGGCGATAAGGACAACATCTCCAGTGCTACGCCTCTGAAACGGCTGAGCATCGAGCCGTCTTTCTGCGCCGATTGGCTCGAGATTTCATGGGACGAGATCGAGCTAAAGGAACGCGTAGGCGCCGGTTCGTTTGGAACTGTGTATCGTGCTGACTGGCACGGCTCTGATGTTGCAGTGAAGGTGCTTACTGACCAGGATGTCGGCGAAGGCTCAACTGAAAGAATTCCTTAGAGAGATTGCAATCATGAAGCGTGTTCGCCATCCGAATGTGGTGTTATTCATGGGTGCAGTGACAAAATGCCCACATTTGTCGATAGTAACAGAGTATCTGCCCAGAGGGAGCCTCTTCCGTCTCATCAACAAGGCATCTGCTGGAGAAATGCTCGATTTAAGGCGTCGTTTGCGCATGGCGTTAGATGTTGCGAAAGGCATCAACTATCTCCATTGCCTGAATCCTCCAATTGTACATTGGGATTTGAAAACGCCAAACATGCTGGTGGACAAGAACTGGT-CCGTGAAGGTAGGTGACTTTGGCTTGTCCAGATTTAAGGCGAATACCTTCATATCCTCCAAATCAGTTGCTGGAACA-CCAGAATGGATGGCACCAGAATTTCTTCGTGGCGAGCCATCAAACGAAAAGTGCGACGTGTACAGCTTTGGAGTGATCTTATGGGAGCTCATGACAATGCAGCAACCATGGAATGGCCTAAGCCCTGCACAAGTAGTAGGAGCAGTTGCATTCCAGAACAGAAGGCTCCCAATTCCACAAGAGACA-GTCCCTGAGCTAGCTGCTCTTGTTGAATCCTGCTGGGATGATGATCCAAGGCAGCGACCGTCGTTTTCGAGCATCGTGGACACGCTGAAGAAGTTGCTCAAATCGATGCTTGGTGGCTCATGACGAATACTGAAGACTGTTGGTCGCCTTCTTA-TTTTTGTTCTCCCTGTTAATGTTAATCTACA-GC-AAACAATAAGTTGGTAAGTCA-GTTGCCTTAAAGGCATCTGAGTTCTCTACAGAAAGGAGAGGATAGTTGAAGCA-GCACAAGTCCAATGCTGCATCGAGTTCGTTAGGTCACC-TTTTTTTTTTCCTCCGTTTTCCGCATGAGAAACTAATATCT-AAAAAATATTGTTTTTTGCTCCTCTTTTTCTCTGGATTGAATTTTGTACAGTGCATACAAATTTGAAATTAATGTGCAGAATTCAGATGGTCAAAAATCGCTCGGTTTACTACAAAA]

[+] EMBL AK120898             [CTCCTCCTCCATTTCCATTTGCATCACCACCTCCTCCTCCTCTTCTCCGAACCCTAATTCCGACGAGCGGTGGTGGTGCTAGCGAGCGAGCTTGATCTCCATGCGTCGGCGCTAGCTCCACCGGCGGCCATGCCTCACCGACGACGCCTGCTTAACCCGGCGCCGTCACTGCCGCCGCCGCCGGCTGCTGCTCCGGCCGGCTTCCACCACCACCTCCTCGCCGTCGACGACACGCGGCTGCCGCTGCTCGCCGACTACGCGCTGCTGCAGGGCGACGCCGCGGCGGCGCCGGCGTCCGCGGAGTGGAGCGCCGGGAGCGGGTTCACCGGCATCTCCACCGACCCGGCCACCGCCACCACCGCCACGACGGCGTCCACCGCCACGGCGCCGGGATCGGCGTCGAACCTGACGGCGGCGACCGCCGGAGGAGGAGGGAGGGAGACGTGGGTCCGCCGCGCCAGGGAGGGCTACTACCTCCAGCTCTCCCTCGCCATCCGCCTAACCTCCGAGGCCTTCCTCGCCGGCGTCCCGCCCGAGCTCCTCATCGGCTGCGGCGGCGGCGGCGAAGCCGAGAACCACGCCGACGTCGCGGCCGATGCCGCCGCTGTCTCCTACCGGCTCTGGGTGAACGGGTGCTTGTCGTGGGGGGACAAGATCGCGCACGGGTTCTACAACATCCTGGGGGTGGACCCGCACGTGTGGGCGATGTGCAACGCTGCGGCGGAGGACGGCCGGCGGCTGCCGACGCTGGTGGCGCTCCGGGCGGTGGACAGCGGCGAGTCGTCGGTGCTGGAGGTGGTGCTCGTCGACAAGTGCGGCGACCCAGCGCTCGCCGACCTCGAGCGCCGGGCCCTCGACCTCTACCGCGCCGCCGGCGTCTCCCTCGACCTCGTCCGCCACCTCGCCGTCCTCGTCTCCGACCACATGGGGGGCGCGTTGCGGTCGGAGGACGGGGACCTGTTCATGCGGTGGAAGGCGGTGAGCAAGCAGCTGAGGAAGCGGCACAGGTGCGTCGTCGTCCCCATCGGCAGCCTCTCCATCGGCTTCTGCCGCCACCGCGCCATCCTCTTCAAGAGCCTCGCCGACTTCATCGGCCTTCCCTGCCGGATCGCGCAGGGCTGCAAGTACTGCTCCGCGCCGCACCGCTCGTCCTGCCTCGTCAAGATCGACAACGAGAGAAGGTTTGTAAGGGAGTACGTCGTCGACCTCGTCGTTGAGCCGGGAAGACTCAGCAGTCCAGACTCGTCTATCAATGGCCAGTTGCTCTCCTCCGTGCCTTCACCTTTCAAGACCTCATGTACAATGAGTTCTGCAAACTATGCAACACCGGCTGCTTCGTGGAATCGCGCGATATCTGGAGATCGTCGCAACTCGATACTGTCAAATCCTCAGTATTCAGTTGCTAAGTACTGTGTTGCCGAGGAGAAGAGCTCTGTTCAGGTAGCCACCAAAGAAGCCATGCTGCCAAAATGCGGTCAGATCACGCAGAACGGCAACTGCAACAAGAACAGTATGGCAGTGTTCGAAGTGTCGAAGCAGATGAAGGCGATGGAGATCAGTTCTGAGAGTGGCGATAAGGACAACATCTCCAGTGCTACGCCTCTGAAACGGCTGAGCATCGAGCCGTCTTTCTGCGCCGATTGGCTCGAGATTTCATGGGACGAGATCGAGCTAAAGGAACGCGTAGGCGCCGGTTCGTTTGGAACTGTGTATCGTGCTGACTGGCACGGCTCTGATGTTGCAGTGAAGGTGCTTACTGACCAGGATGTCGGCGAAGGCTCAACTGAAAGAATTCCTTAGAGAGATTGCAATCATGAAGCGTGTTCGCCATCCGAATGTGGTGTTATTCATGGGTGCAGTGACAAAATGCCCACATTTGTCGATAGTAACAGAGTATCTGCCCAGAGGGAGCCTCTTCCGTCTCATCAACAAGGCATCTGCTGGAGAAATGCTCGATTTAAGGCGTCGTTTGCGCATGGCGTTAGATGTTGCGAAAGGCATCAACTATCTCCATTGCCTGAATCCTCCAATTGTACATTGGGATTTGAAAACGCCAAACATGCTGGTGGACAAGAACTGGT CCGTGAAGGTAGGTGACTTTGGCTTGTCCAGATTTAAGGCGAATACCTTCATATCCTCCAAATCAGTTGCTGGAACA CCAGAATGGATGGCACCAGAATTTCTTCGTGGCGAGCCATCAAACGAAAAGTGCGACGTGTACAGCTTTGGAGTGATCTTATGGGAGCTCATGACAATGCAGCAACCATGGAATGGCCTAAGCCCTGCACAAGTAGTAGGAGCAGTTGCATTCCAGAACAGAAGGCTCCCAATTCCACAAGAGACA GTCCCTGAGCTAGCTGCTCTTGTTGAATCCTGCTGGGATGATGATCCAAGGCAGCGACCGTCGTTTTCGAGCATCGTGGACACGCTGAAGAAGTTGCTCAAATCGATGCTTGGTGGCTCATGACGAATACTGAAGACTGTTGGTCGCCTTCTTA TTTTTGTTCTCCCTGTTAATGTTAATCTACA GC AAACAATAAGTTGGTAAGTCA GTTGCCTTAAAGGCATCTGAGTTCTCTACAGAAAGGAGAGGATAGTTGAAGCA GCACAAGTCCAATGCTGCATCGAGTTCGTTAGGTCACC TTTTTTTTTTCCTCCGTTTTCCGCATGAGAAACTAATATCT AAAAAATATTGTTTTTTGCTCCTCTTTTTCTCTGGATTGAATTTTGTACAGTGCATACAAATTTGAAATTAATGTGCAGAATTCA                                ]
[+] EMBL CB685013             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCTCCTTGTGAACGGGTGCTTGTCGTGGGGGGACAAGATCGCGCACGGGTTCTACAACATCCTGGGGGTGGATCC CCCGTGTGGGCGATGTGCAACGCTGCGGCGGAGGACGGCCGGCGGCTGCCGACGCTGGTGGCGCTCCGGGCGGTGGACAGCGGCGAGTCGTCGGTGCTGGAGGTGGTGCTCGTCGACAAGTGCGGCGACCCAGCGCTCGCCGACCTCGAGCGCCGGGCCCTCGACCTCTACCGCGCCGCCGGCGTCTCCCTCGACCTCGTCCGCCACCTCGCCGTCCTCGTCTCCGACCACATGGGGGGCGCGTTGCGGTCGGAGGACGGGGACCTGTTCATGCGGTGGAAGGCGGTGAGCAAGCAGCTGAGGAAGCGGCACAGGTGCGTCGTCGTCCCCATCGGCAGCCTCTCCATCGGCTTCTGCCGCCACCGCGCCATCCTCTTCAAGAGCCTCGCCGACTTCATCGGCCTTCCCTGCCGGATCGCGCAGGGCTGCAAGTACTGCTCCGCGCCGCACCGCTCGTCCTGCCTCGTCAAGATCGACAACGAGAGAAGGTTTGTAAGGGAGTACGTCGTCGACCTCGTCGTTGAGCCGGGAAGACTCAGCAGTCCAGACTCGTCTATCAATGGCCAGGTGCTCTCCTCCGTGCCTTCACCTTTCAAGACCTCATGTACAATGAGTTCTGCAAACTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF324399             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACCGCTCGTCCTGCCTCGTCAAGATCGACAACGAGAGAAGGTTTGTAAGGGAGTACGTCGTCGACCTCGTCGTTGAGCCGGGAAGACTCAGCAGTCCAGACTCGTCTATCAATGGCCAGTTGCTCTCCTCCGTGCCTTCACCTTTCAAGACCTCATGTACAATGAGTTCTGCAAACTATGCAACACCGGCTGCTTCGTGGAATCGCGCGATATCTGGAGATCGTCGCAACTCGATACTGTCAAATCCTCAGTATTCAGTTGCTAAGTACTGTGTTGCCGAGGAGAAGAGCTCTGTTCAGGTAGCCACCAAAGAAGCCATGCTGCCAAAATGCGGTCAGATCACGCAGAACGGCAACTGCAACAAGAACAGTATGGCAGTGTTCGAAGTGTCGAAGCAGATGAAGGCGATGGAGATCAGTTCTGAGAGTGGCGATAAGGACAACATCTCCAGTGCTACGCCTCTGAAACGGCTGAGCATCGAGCCGTCTTTCTGCGCCGATTGGCTCGAGATTTCATGGGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL D43336               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CGTCTCATCAACAAGGCATCTGCTGGAGAAATGCTCGATTTAAGGCGTCGTTTGCGCATGGCGTTAGATGTTGCGAAAGGCATCAACTATCTCCATTGCCTGAATCCTCCAATTGTACATTGGGATTTGAAAACGNCAAACATGCTGGTGGNCAAGAACTGGTCCCGTGAAGGTAGGTGACTTTGGNTTGTCCAGATTTAAGGCGNATACCTTCATATCCTCCAAATCAGTTTCTGGNACACCCAGAATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CF323770             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TAGGAGCAGTTGCATTCCAGAACAGAAGGCTCCCAATTCCACAAGAGACA GTCCCTGAGCTAGCTGCTCTTGTTGAATCCTGCTGGGATGATGATCCAAGGCAGCGACCGTCGTTTTCGAGCATCGTGGACACGCTGAAGAAGTTGCTCAAATCGATGCTTGGTGGCTCATGACGAATACTGAAGACTGTTGGTCGCCTTCTTA TTTTTGTTCTCCCTGTTAATGTTAATCTACA GC AAACAATAAGTTGGTAAGTCA GTTGCCTTAAAGGCATCTGAGTTCTCTACAGAAAGGAGAGGATAGTTGAAGCA GCACAAGTCCAATGCTGCATCGAGTTCGTTAGGTCACC TTTTTTTTTTCCTCCGTTTTCCGCATGAGAAACTAATATCT AAAAAATATTGTTTTTTGCTCCTCTTTTTCTCTGGATTGAATTTTGTACAGTGCATACAAATTTGAAATTAATGTGCAGAATTCAGATGGTCATGATTCGCTCGGTTTACTACAAAA]
[+] EMBL BM419387             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCCAGAACAGAAGGCTCCCAATTCCACAAGAGACA GTCCCTGAGCTAGCTGCTCTTGTTGAATCCTGCTGGGATGATGATCCAAGGCAGCGACCGTCGTTTTCGAGCATCGTGGACACGCTGAAGAAGTTGCTCAAATCGATGCTTGGTGGCTCATGACGAATACTGAAGACTGTTGGTCGCCTTCTTA TTTTTGTTCTCCCTGTTAATGTTAATCTACA GC AAACAATAAGTTGGTAAGTCA GTTGCCTTAAAGGCATCTGAGTTCTCTACAGAAAGGAGAGGATAGTTGAAGCA GCACAAGTCCAATGCTGCATCGAGTTCGTTAGGTCACC TTTTTTTTTTCCTCCGTTTTCCGCATGAGAAACTAATATCT AAAAAATATTGTTTTTTGCTCCTCTTTTTCTCTGGATTGAATTTTGTACAGTGCATACAAATTTGAAATTAATGTGCAGAATTAAGATGGTCAAAAAaaaaa               ]
[+] EMBL BI808830             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGAACAGAAGGCTCCC ATTCCACAAGAGACACGTCCCTGAGCTAGCTGCTCTTGTTGAATCCTGCTGGGATGATGATCCAA GCAGCGACCGTCGTTTTCGAGCATCGTGGACACCCTGAAGAAGTTGCTCAAATCGATGCTTGGTGGCTCATGACGAATACTGAAGACTGTT GTCGCCTTCTTATTTTTTGTTCTCCCTGTTAATGTTAATCTACACGCAAAACAATAAGTTGGTAAGTCACGTT CCTTAAAGGCATCTGAGTTCTCTACAGAAAGGAGAGGATAGTTGAAGCACGCACAAGTCCAATGCTGCATCGAGTTCGTTAGGTCACC TTTTTTTTTTCCTCCGTTTTCCGCATGAGAAACTAATATCT AAAAAATATTGTTTTTTGCTCCTCTTTTTCTCTGGATTGAATTTTGTACAGTGCATAC AATTTGAAATTAATGTGCAGAATTAAGATGGTCAAAAA                    ]
[+] EMBL AA749984             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AATAAGTTGGTAAGTCA GTTGCCTTAAAGG ATCTGAGTTCTCTACAGAAAGGAGAGGATAGTTGAAGCA GCACAAGTCCAATGCTGCATCGAGTTCGTTAGGTCACCTTTTTTTTTTTCCTCCGTTTTCCGCATGAGAAACTAATATCTAAAAAAATATTGTTTTT                                                                                                     ]




>consensus_11829#0
CTCCTCCTCCATTTCCATTTGCATCACCACCTCCTCCTCCTCTTCTCCGAACCCTAATTC
CGACGAGCGGTGGTGGTGCTAGCGAGCGAGCTTGATCTCCATGCGTCGGCGCTAGCTCCA
CCGGCGGCCATGCCTCACCGACGACGCCTGCTTAACCCGGCGCCGTCACTGCCGCCGCCG
CCGGCTGCTGCTCCGGCCGGCTTCCACCACCACCTCCTCGCCGTCGACGACACGCGGCTG
CCGCTGCTCGCCGACTACGCGCTGCTGCAGGGCGACGCCGCGGCGGCGCCGGCGTCCGCG
GAGTGGAGCGCCGGGAGCGGGTTCACCGGCATCTCCACCGACCCGGCCACCGCCACCACC
GCCACGACGGCGTCCACCGCCACGGCGCCGGGATCGGCGTCGAACCTGACGGCGGCGACC
GCCGGAGGAGGAGGGAGGGAGACGTGGGTCCGCCGCGCCAGGGAGGGCTACTACCTCCAG
CTCTCCCTCGCCATCCGCCTAACCTCCGAGGCCTTCCTCGCCGGCGTCCCGCCCGAGCTC
CTCATCGGCTGCGGCGGCGGCGGCGAAGCCGAGAACCACGCCGACGTCGCGGCCGATGCC
GCCGCTGTCTCCTACCGGCTCTGGGTGAACGGGTGCTTGTCGTGGGGGGACAAGATCGCG
CACGGGTTCTACAACATCCTGGGGGTGGACCCGCACGTGTGGGCGATGTGCAACGCTGCG
GCGGAGGACGGCCGGCGGCTGCCGACGCTGGTGGCGCTCCGGGCGGTGGACAGCGGCGAG
TCGTCGGTGCTGGAGGTGGTGCTCGTCGACAAGTGCGGCGACCCAGCGCTCGCCGACCTC
GAGCGCCGGGCCCTCGACCTCTACCGCGCCGCCGGCGTCTCCCTCGACCTCGTCCGCCAC
CTCGCCGTCCTCGTCTCCGACCACATGGGGGGCGCGTTGCGGTCGGAGGACGGGGACCTG
TTCATGCGGTGGAAGGCGGTGAGCAAGCAGCTGAGGAAGCGGCACAGGTGCGTCGTCGTC
CCCATCGGCAGCCTCTCCATCGGCTTCTGCCGCCACCGCGCCATCCTCTTCAAGAGCCTC
GCCGACTTCATCGGCCTTCCCTGCCGGATCGCGCAGGGCTGCAAGTACTGCTCCGCGCCG
CACCGCTCGTCCTGCCTCGTCAAGATCGACAACGAGAGAAGGTTTGTAAGGGAGTACGTC
GTCGACCTCGTCGTTGAGCCGGGAAGACTCAGCAGTCCAGACTCGTCTATCAATGGCCAG
TTGCTCTCCTCCGTGCCTTCACCTTTCAAGACCTCATGTACAATGAGTTCTGCAAACTAT
GCAACACCGGCTGCTTCGTGGAATCGCGCGATATCTGGAGATCGTCGCAACTCGATACTG
TCAAATCCTCAGTATTCAGTTGCTAAGTACTGTGTTGCCGAGGAGAAGAGCTCTGTTCAG
GTAGCCACCAAAGAAGCCATGCTGCCAAAATGCGGTCAGATCACGCAGAACGGCAACTGC
AACAAGAACAGTATGGCAGTGTTCGAAGTGTCGAAGCAGATGAAGGCGATGGAGATCAGT
TCTGAGAGTGGCGATAAGGACAACATCTCCAGTGCTACGCCTCTGAAACGGCTGAGCATC
GAGCCGTCTTTCTGCGCCGATTGGCTCGAGATTTCATGGGACGAGATCGAGCTAAAGGAA
CGCGTAGGCGCCGGTTCGTTTGGAACTGTGTATCGTGCTGACTGGCACGGCTCTGATGTT
GCAGTGAAGGTGCTTACTGACCAGGATGTCGGCGAAGGCTCAACTGAAAGAATTCCTTAG
AGAGATTGCAATCATGAAGCGTGTTCGCCATCCGAATGTGGTGTTATTCATGGGTGCAGT
GACAAAATGCCCACATTTGTCGATAGTAACAGAGTATCTGCCCAGAGGGAGCCTCTTCCG
TCTCATCAACAAGGCATCTGCTGGAGAAATGCTCGATTTAAGGCGTCGTTTGCGCATGGC
GTTAGATGTTGCGAAAGGCATCAACTATCTCCATTGCCTGAATCCTCCAATTGTACATTG
GGATTTGAAAACGCCAAACATGCTGGTGGACAAGAACTGGTCCGTGAAGGTAGGTGACTT
TGGCTTGTCCAGATTTAAGGCGAATACCTTCATATCCTCCAAATCAGTTGCTGGAACACC
AGAATGGATGGCACCAGAATTTCTTCGTGGCGAGCCATCAAACGAAAAGTGCGACGTGTA
CAGCTTTGGAGTGATCTTATGGGAGCTCATGACAATGCAGCAACCATGGAATGGCCTAAG
CCCTGCACAAGTAGTAGGAGCAGTTGCATTCCAGAACAGAAGGCTCCCAATTCCACAAGA
GACAGTCCCTGAGCTAGCTGCTCTTGTTGAATCCTGCTGGGATGATGATCCAAGGCAGCG
ACCGTCGTTTTCGAGCATCGTGGACACGCTGAAGAAGTTGCTCAAATCGATGCTTGGTGG
CTCATGACGAATACTGAAGACTGTTGGTCGCCTTCTTATTTTTGTTCTCCCTGTTAATGT
TAATCTACAGCAAACAATAAGTTGGTAAGTCAGTTGCCTTAAAGGCATCTGAGTTCTCTA
CAGAAAGGAGAGGATAGTTGAAGCAGCACAAGTCCAATGCTGCATCGAGTTCGTTAGGTC
ACCTTTTTTTTTTCCTCCGTTTTCCGCATGAGAAACTAATATCTAAAAAATATTGTTTTT
TGCTCCTCTTTTTCTCTGGATTGAATTTTGTACAGTGCATACAAATTTGAAATTAATGTG
CAGAATTCAGATGGTCAAAAATCGCTCGGTTTACTACAAAA

consensusID : consensus_11829#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 496
fasta sequence

                              [ACCTTTCAGAACCTTCAAGGTACAAGGAGTTTTTGCAAACTATGCAACCACCGGCGGGCTTCGTGGGATCGGCGCGAAATCTGGAGTTCTTCGCAACTCGATACCGTCCAAATCCTCAGTATTCAGGTACAGAAATACCATTCTTTCTCCACAGCCAATATGTTATTGGAGTATTCTGATTAGCCATTTACAATCTTTCTTGTGCTGCGTACAGTTGCTAAGTACTGTGTTGCCGAGGAGAAGAGCTCTGTTCAGGTAGCCACCAAAGAAGCCATGCTGCCAAAATGCGGTCAGATCACGCAGAACGGCAACTGCAACAAGAACAGTATGGCAGTGTTCGAAGTGTCGAAGCAGATGAAGGCGATGGAGATCAGTTCTGAGAGTGGCGATAAGGACGACATCTCCAGTGCTACGCCTCTGAAACGGCTGAGCATCGAGCCGTCTTTCTGCGCCGATGGGCTCGAGATTTCAGGGACGAGATCGAGGTAAAGGAACC]

[-] EMBL CA753361             [ACCTTTCAGAACCTTCAAGGTACAAGGAGTTTTTGCAAACTATGCAACCACCGGCGGGCTTCGTGGGATCGGCGCGAAATCTGGAGTTCTTCGCAACTCGATACCGTCCAAATCCTCAGTATTCAGGTACAGAAATACCATTCTTTCTCCACAGCCAATATGTTATTGGAGTATTCTGATTAGCCATTTACAATCTTTCTTGTGCTGCGTACAGTTGCTAAGTACTGTGTTGCCGAGGAGAAGAGCTCTGTTCAGGTAGCCACCAAAGAAGCCATGCTGCCAAAATGCGGTCAGATCACGCAGAACGGCAACTGCAACAAGAACAGTATGGCAGTGTTCGAAGTGTCGAAGCAGATGAAGGCGATGGAGATCAGTTCTGAGAGTGGCGATAAGGACGACATCTCCAGTGCTACGCCTCTGAAACGGCTGAGCATCGAGCCGTCTTTCTGCGCCGATGGGCTCGAGATTTCAGGGACGAGATCGAGGTAAAGGAACC]




>consensus_11829#1
ACCTTTCAGAACCTTCAAGGTACAAGGAGTTTTTGCAAACTATGCAACCACCGGCGGGCT
TCGTGGGATCGGCGCGAAATCTGGAGTTCTTCGCAACTCGATACCGTCCAAATCCTCAGT
ATTCAGGTACAGAAATACCATTCTTTCTCCACAGCCAATATGTTATTGGAGTATTCTGAT
TAGCCATTTACAATCTTTCTTGTGCTGCGTACAGTTGCTAAGTACTGTGTTGCCGAGGAG
AAGAGCTCTGTTCAGGTAGCCACCAAAGAAGCCATGCTGCCAAAATGCGGTCAGATCACG
CAGAACGGCAACTGCAACAAGAACAGTATGGCAGTGTTCGAAGTGTCGAAGCAGATGAAG
GCGATGGAGATCAGTTCTGAGAGTGGCGATAAGGACGACATCTCCAGTGCTACGCCTCTG
AAACGGCTGAGCATCGAGCCGTCTTTCTGCGCCGATGGGCTCGAGATTTCAGGGACGAGA
TCGAGGTAAAGGAACC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11829#0      CTCCTCCTCCATTTCCATTTGCATCACCACCTCCTCCTCCTCTTCTCCGAACCCTAATTC 60
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      CGACGAGCGGTGGTGGTGCTAGCGAGCGAGCTTGATCTCCATGCGTCGGCGCTAGCTCCA 120
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      CCGGCGGCCATGCCTCACCGACGACGCCTGCTTAACCCGGCGCCGTCACTGCCGCCGCCG 180
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      CCGGCTGCTGCTCCGGCCGGCTTCCACCACCACCTCCTCGCCGTCGACGACACGCGGCTG 240
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      CCGCTGCTCGCCGACTACGCGCTGCTGCAGGGCGACGCCGCGGCGGCGCCGGCGTCCGCG 300
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      GAGTGGAGCGCCGGGAGCGGGTTCACCGGCATCTCCACCGACCCGGCCACCGCCACCACC 360
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      GCCACGACGGCGTCCACCGCCACGGCGCCGGGATCGGCGTCGAACCTGACGGCGGCGACC 420
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      GCCGGAGGAGGAGGGAGGGAGACGTGGGTCCGCCGCGCCAGGGAGGGCTACTACCTCCAG 480
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      CTCTCCCTCGCCATCCGCCTAACCTCCGAGGCCTTCCTCGCCGGCGTCCCGCCCGAGCTC 540
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      CTCATCGGCTGCGGCGGCGGCGGCGAAGCCGAGAACCACGCCGACGTCGCGGCCGATGCC 600
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      GCCGCTGTCTCCTACCGGCTCTGGGTGAACGGGTGCTTGTCGTGGGGGGACAAGATCGCG 660
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      CACGGGTTCTACAACATCCTGGGGGTGGACCCGCACGTGTGGGCGATGTGCAACGCTGCG 720
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      GCGGAGGACGGCCGGCGGCTGCCGACGCTGGTGGCGCTCCGGGCGGTGGACAGCGGCGAG 780
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      TCGTCGGTGCTGGAGGTGGTGCTCGTCGACAAGTGCGGCGACCCAGCGCTCGCCGACCTC 840
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      GAGCGCCGGGCCCTCGACCTCTACCGCGCCGCCGGCGTCTCCCTCGACCTCGTCCGCCAC 900
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      CTCGCCGTCCTCGTCTCCGACCACATGGGGGGCGCGTTGCGGTCGGAGGACGGGGACCTG 960
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      TTCATGCGGTGGAAGGCGGTGAGCAAGCAGCTGAGGAAGCGGCACAGGTGCGTCGTCGTC 1020
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      CCCATCGGCAGCCTCTCCATCGGCTTCTGCCGCCACCGCGCCATCCTCTTCAAGAGCCTC 1080
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      GCCGACTTCATCGGCCTTCCCTGCCGGATCGCGCAGGGCTGCAAGTACTGCTCCGCGCCG 1140
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      CACCGCTCGTCCTGCCTCGTCAAGATCGACAACGAGAGAAGGTTTGTAAGGGAGTACGTC 1200
consensus_11829#1      -------------ACCTT-TCAGAACCTTCAAGGTACAAGGAGTTTTTGCAAACTATG-- 44
                                     ***  ***  * *  *** *    * *  ** *     * ** *  

consensus_11829#0      GTCGACCTCGTCGTTGAGCCGGGAAGACTCAGCAGTCCAGACTCGTCTATCAATGGCCAG 1260
consensus_11829#1      --CAAC--CACCGGCGGGCTTCGTGGGATCGGCG---CGAAATCTGGAGTTCTTCGCAAC 97
                         * **  *  **  * **   *  *  ** **    *  * **     *   * ** * 

consensus_11829#0      TTGCTCTCCTCCGTGCCTTCACCTTTCAAGACCTCATGTACAATGAGTTCTGCAAACTAT 1320
consensus_11829#1      TCGATACCGTCCAAATCCTCAGTATTCAGGTACAGAAATACCATTCTTTCTCCACA---- 153
                       * * *  * ***    * ***   **** *  *  *  *** **   **** ** *    

consensus_11829#0      GCAACACCGGCTGCTTCGTGGAATCGCGCGATATCTGGAGATCGTCGCAACTCGATACTG 1380
consensus_11829#1      -----GCCAATATGTTATTGGAGTATTCTGAT---TAGCCAT--TTACAAT------CTT 197
                             **      **  **** *     ***   * *  **  *  ***       ** 

consensus_11829#0      TCAAATCCTCAGTATTCAGTTGCTAAGTACTGTGTTGCCGAGGAGAAGAGCTCTGTTCAG 1440
consensus_11829#1      TCTTGTGCTGCGTA--CAGTTGCTAAGTACTGTGTTGCCGAGGAGAAGAGCTCTGTTCAG 255
                       **   * **  ***  ********************************************

consensus_11829#0      GTAGCCACCAAAGAAGCCATGCTGCCAAAATGCGGTCAGATCACGCAGAACGGCAACTGC 1500
consensus_11829#1      GTAGCCACCAAAGAAGCCATGCTGCCAAAATGCGGTCAGATCACGCAGAACGGCAACTGC 315
                       ************************************************************

consensus_11829#0      AACAAGAACAGTATGGCAGTGTTCGAAGTGTCGAAGCAGATGAAGGCGATGGAGATCAGT 1560
consensus_11829#1      AACAAGAACAGTATGGCAGTGTTCGAAGTGTCGAAGCAGATGAAGGCGATGGAGATCAGT 375
                       ************************************************************

consensus_11829#0      TCTGAGAGTGGCGATAAGGACAACATCTCCAGTGCTACGCCTCTGAAACGGCTGAGCATC 1620
consensus_11829#1      TCTGAGAGTGGCGATAAGGACGACATCTCCAGTGCTACGCCTCTGAAACGGCTGAGCATC 435
                       ********************* **************************************

consensus_11829#0      GAGCCGTCTTTCTGCGCCGATTGGCTCGAGATTTCATGGGACGAGATCGAGCTAAAGGAA 1680
consensus_11829#1      GAGCCGTCTTTCTGCGCCGATGGGCTCGAGATTTCA-GGGACGAGATCGAGGTAAAGGAA 494
                       ********************* ************** ************** ********

consensus_11829#0      CGCGTAGGCGCCGGTTCGTTTGGAACTGTGTATCGTGCTGACTGGCACGGCTCTGATGTT 1740
consensus_11829#1      CC---------------------------------------------------------- 496
                       *                                                           

consensus_11829#0      GCAGTGAAGGTGCTTACTGACCAGGATGTCGGCGAAGGCTCAACTGAAAGAATTCCTTAG 1800
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      AGAGATTGCAATCATGAAGCGTGTTCGCCATCCGAATGTGGTGTTATTCATGGGTGCAGT 1860
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      GACAAAATGCCCACATTTGTCGATAGTAACAGAGTATCTGCCCAGAGGGAGCCTCTTCCG 1920
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      TCTCATCAACAAGGCATCTGCTGGAGAAATGCTCGATTTAAGGCGTCGTTTGCGCATGGC 1980
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      GTTAGATGTTGCGAAAGGCATCAACTATCTCCATTGCCTGAATCCTCCAATTGTACATTG 2040
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      GGATTTGAAAACGCCAAACATGCTGGTGGACAAGAACTGGTCCGTGAAGGTAGGTGACTT 2100
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      TGGCTTGTCCAGATTTAAGGCGAATACCTTCATATCCTCCAAATCAGTTGCTGGAACACC 2160
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      AGAATGGATGGCACCAGAATTTCTTCGTGGCGAGCCATCAAACGAAAAGTGCGACGTGTA 2220
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      CAGCTTTGGAGTGATCTTATGGGAGCTCATGACAATGCAGCAACCATGGAATGGCCTAAG 2280
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      CCCTGCACAAGTAGTAGGAGCAGTTGCATTCCAGAACAGAAGGCTCCCAATTCCACAAGA 2340
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      GACAGTCCCTGAGCTAGCTGCTCTTGTTGAATCCTGCTGGGATGATGATCCAAGGCAGCG 2400
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      ACCGTCGTTTTCGAGCATCGTGGACACGCTGAAGAAGTTGCTCAAATCGATGCTTGGTGG 2460
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      CTCATGACGAATACTGAAGACTGTTGGTCGCCTTCTTATTTTTGTTCTCCCTGTTAATGT 2520
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      TAATCTACAGCAAACAATAAGTTGGTAAGTCAGTTGCCTTAAAGGCATCTGAGTTCTCTA 2580
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      CAGAAAGGAGAGGATAGTTGAAGCAGCACAAGTCCAATGCTGCATCGAGTTCGTTAGGTC 2640
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      ACCTTTTTTTTTTCCTCCGTTTTCCGCATGAGAAACTAATATCTAAAAAATATTGTTTTT 2700
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      TGCTCCTCTTTTTCTCTGGATTGAATTTTGTACAGTGCATACAAATTTGAAATTAATGTG 2760
consensus_11829#1      ------------------------------------------------------------
                                                                                   

consensus_11829#0      CAGAATTCAGATGGTCAAAAATCGCTCGGTTTACTACAAAA 2801
consensus_11829#1      -----------------------------------------