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Oryza sativa
cluster # 11846 cluster # 11846       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11846#0 length = 1497 sequences # 5  
consensus_11846#1 length = 917 sequences # 4  

consensusID : consensus_11846#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1497
fasta sequence
                              [CGCACACGTGTTGTACTATACCCCTTTGTTGGGTTCTTTGCCTCATATAAGGTTAGAAGAAGGTTAGAAGAGGCTAGATATAATCAGCATTGCAGCCTTCGCGACAAGTTCAGAAGATATATGGCAGGAGGCAGTAAGACGCGGATCCATGCCTCGCTCGTTTCCACTCTCCTGCTGCTGCTCCCATTGGCGTCTGCGATCCACAGGAGCGACTTCCCGGCGTCGTTCCTCTTCGGCACGGCCACCTCCTCGTATCAGATTGAAGGTGCATATCTAGAAGGCAACAAAAGTTTAAGCAATTGGGATGTGTTCACTCATCTACCAGGAAATATCAAGGATGGAAGCAACGGAGATATCGCGGATGATCATTATCACCGCTACGAGGAGGACGTCGAGCTGATGAACTCCCTCGGCGTAAATGCCTATAGATTCTCGATATCATGGTCCAGAATCCTTCCAAAAGGGAGATTTGGTGGAGTCAACCCAGCGGGCATTGATTTCTACAACAAACTTATCGATTCAATTTTACTGAAAGGAATACAGCCATTTGTCACCCTGACACACTACGACATCCCACAGGAGCTCGAAGACAGATACGGAGCTTGGCTCAACGCCGAGATACAGTCGGATTTCGGGCACTTCGCCGACGTCTGCTTCGGCGCGTTCGGCGACCGCGTCAAGTACTGGACCACCTTCAACGAGCCCAACGTCGCGGTGCGGCATGGCTACATGCTCGGCACCTACCCGCCGTCCCGCTGCTCGCCGCCGTTCGGCCACTGCGCCCCGCGGCGGCGACTCACACGCCGAGCCCTACGTCGCCGCCCACAACGTGATACTCTCGCACGCCACCGCCATCGAGATATACAAGAGAAAGTACCAGAGCAAGCAGAGAGGAATGATTGGCATGGTGTTGTACAGCACCTGGTACGAGCCGCTGAGAGATGTCCCCGAGGACCGGCTTGCCACCGAGCGAGCCTTGGCGTTCGAAACTCCGTGGTACTACTACGAATTATAAGATCACTCGCTCCATTGCAGTGATTGAACGTGCTCGTAAAAAAATGTGGATTTGTTCTGAATCAACAGAGGTTTTCTTCCGATTTTTGCCTGTATGTACTCTTGCAGGTTTCTTGATCCACTGGTCTACGGCGATTACCCACCGGAGATGCGCCAGATTCTCGGCGGGAGGCTGCCGAGTTTCTCGCCGGAGGACAGGAGGAAGCTGCGGTACAAGCTGGACTTCATCGGGGTGAACCACTACACGACCCTGTACGCCAGGGACTGCATGTTCTCAGACTGCCCACAGGGGCAGGAGACGCAGCACGCGCTGGCGGCTGTCACTGGAGAGAGCAACGGGCTTCCCATTGGAACTCCAGATTTAAGGGGTTAAAGAATGTACTTGCAGACAGCGATGCCCACTTTCTACGTGGTACCGGACGGGATTGAGAAGATGGTCAAGTACTTCATGAGAAGATACAACAACCTGCCAATGTTCATCAC]

[+] EMBL CB634193             [CGCACACGTGTTGTACTATACCCCTTTGTTGGGTTCTTTGCCTCATATAAGGTTAGAAGAAGGTTAGAAGAGGCTAGATATAATCAGCATTGCAGCCTTCGCGACAAGTTCAGAAGATATATGGCAGGAGGCAGTAAGACGCGGATCCATGCCTCGCTCGTTTCCACTCTCCTGCTGCTGCTCCCATTGGCGTCTGCGATCCACAGGAGCGACTTCCCGGCGTCGTTCCTCTTCGGCACGGCCACCTCCTCGTATCAGATTGAAGGTGCATATCTAGAAGGCAACAAAAGTTTAAGCAATTGGGATGTGTTCACTCATCTACCAGGAAATATCAAGGATGGAAGCAACGGAGATATCGCGGATGATCATTATCACCGCTACGAGGAGGACGTCGAGCTGATGAACTCCCTCGGCGTAAATGCCTATAGATTCTCGATATCATGGTCCAGAATCCTTCCAAAAGGGAGATTTGGTGGAGTCAACCCAGCGGGCATTGATTTCTACAACAAACTTATCGATTCAATTTTACTGAAAGGAATACAGCCATTTGTCACCCTGACACACTACGACATCCCACAGGAGCTCGAAGACAGATACGGAGCTTGGCTCAACGCCGAGATACAGTCGGATTTCGGGCACTTCGCCGACGTCTGCTTCGGCGCGTTCGGCGACCGCGTCAAGTACTGGACCACCTTCAACGAGCCCAACGTCGCGGTGCGGCATGGCTACATGCTCGGCACCTACCCGCCGTNCCGCTGCTCGCCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB633785             [                                                       GAAGAAGGTTAGAAGAGGCTAGATATAATCAGCATTGCAGCCTTCGCGACAAGTTCAGAAGATATATGGCAGGAGGCAGTAAGACGCGGATCCATGCCTCGCTCGTTTCCACTCTCCTGCTGCTGCTCCCATTGGCGTCTGCGATCCACAGGAGCGACTTCCCGGCGTCGTTCCTCTTCGGCACGGCCACCTCCTCGTATCAGATTGAAGGTGCATATCTAGAAGGCAACAAAAGTTTAAGCAATTGGGATGTGTTCACTCATCTACCAGGAAATATCAAGGATGGAAGCAACGGAGATATCGCGGATGATCATTATCACCGCTACGAGGAGGACGTCGAGCTGATGAACTCCCTCGGCGTAAATGCCTATAGATTCTCGATATCATGGTCCAGAATCCTTCCAAAAGGGAGATTTGGTGGAGTCAACCCAGCGGGCATTGATTTCTACAACAAACTTATCGATTCAATTTTACTGAAAGGAATACAGCCATTTGTCACCCTGACACACTACGACATCCCACAGGAGCTCGAAGACAGATACGGAGCTTGGCTCAACGCCGAGATACAGTCGGATTTCGGGCACTTCGCCGACGTCTGCTTCGGCGCGTTCGGCGACCGCGTCAAGTACTGGACCACCTTCAACGAGCCCAACGTCGCGGTGCGGCATGGCTACATGCTCGGCACCTACCCGCCGTCCCGCTGCTCGCCGCCGTTCGGCCACTGCGCCCCGCGGCGGCGACTCACACGCCGAGCCCTACGTCGCCGCCCACAACGTGATACTCTCGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB633739             [                                                       GAAGCACGTTAGAAGAGGCTAGATATAATCAGCATTGCAGCCTTCGCGACAAGTTCAGAAGATATATGGCAGGAGGCAGTAAGACGCGGATCCATGCCTCGCTCGTTTCCACTCTCCTGCTGCTGCTCCCATTGGCGTCTGCGATCCACAGGAGCGACTTCCCGGCGTCGTTCCTCTTCGGCACGGCCACCTCCTCGTATCAGATTGAAGGTGCATATCTAGAAGGCAACAAAAGTTTAAGCAATTGGGATGTGTTCACTCATCTACCAGGAAATATCAAGGATGGAAGCAACGGAGATATCGCGGATGATCATTATCACCGCTACGAGGAGGACGTCGAGCTGATGAACTCCCTCGGCGTAAATGCCTATAGATTCTCGATATCATGGTCCAGAATCCTTCCAAAAGGGAGATTTGGTGGAGTCAACCCAGCGGGCATTGATTTCTACAACAAACTTATCGATTCAATTTTACTGAAAGGAATACAGCCATTTGTCACCCTGACACACTACGACATCCCACAGGAGCTCGAAGACAGATACGGAGCTTGGCTCAACGCCGAGATACAGTCGGATTTCGGGCACTTCGCCGACGTCTGCTTCGGCGCGTTCGGCGACCGCGTCAAGTACTGGACCACCTTCAACGAGCCCAACGTCGCGGTGCGGCATGGCTACATGCTCGGCACCTACCCGCCGTCCCGCTGCTCGCCGCCGTTCGGCCACTGC CCCCGCGGCGGCGACTCACACGCCGAGCCCTACGTCGCCGCCCACAAg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB633700             [                                                       GAAGAACGTTAGAAGAGGCTAGATATAATCAGCATTGCAGCCTTCGCGACAAGTTCAGAAGATATATGGCAGGAGGCAGTAAGACGCGGATCCATGCCTCGCTCGTTTCCACTCTCCTGCTGCTGCTCCCATTGGCGTCTGCGATCC CAGGAGCGACTTCCCGGCGGCGTTCCTCTTCGGCACGGCCACCTCCTCGTATCAGATTGAAGGTGCATATCTACAAGGCAACAACAGTTTAAGCTATTGGGATGTGTTCACTCATCTACCAGGAAATATCAAGGATGGAAGCAGCGGAGATATCCCGGATGATCATTATCACCGCTACTAGGAGGACGTCGAGCTGATGAACTCCCTCGGCGTAAATGCCTATAGATTCTCGATATCATGGTCCAGAATCCTTCCAAAAGGGAGATTTGGAGGAGTCAACCCAGCGGGCATTGATTTCTACAACAAACTTATCGATTCAATTTTACTGAAAGGAATACTGCCATTTGTCACCCTGACACACTACGACATCCCACAGGAGCTCGAAGACAGATACAGAGCTTGGCTCAACGCCGAGATACAGTCGGATTTCGGGCACTTCACCGACGTCTGCTTCGGCGCGTTCAGCGACCGCATCAAGTACTGGACCACCTTCAACGAGCCCAACGTCTCGGCGCGGCATGGCTACGTGCTCGGTACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB653333             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TACATGCTCGGCACCTACCCGCCGTCCCGCTGCTCGCCGCCGTTCGGCCACTGCG CCCGCGGCGGCGACTCACACGCCGAGCCCTACGTCGCCGCCCACAACGTGATACTCTCCCACGCCACCGCCATCGAGATATACAAGAGAAAGTACCAGAGCAAGCAGAGAGGAATGATTGGCATGGTGTTGTACAGCACCTGGTACGAGCCGCTGAGAGATGTCCCCGAGGACCGGCTTGCCACCGAGCGAGCCTTGGCGTTCGAAACTCCGTGGTACTACTACGAATTATAAGATCACTCGCTCCATTGCAGTGATTGAACGTGCTCGTAAAAAAATGTGGATTTGTTCTGAATCAACAGAGGTTTTCTTCCGATTTTTGCCTGTATGTACTCTTGCAGGTTTCTTGATCCACTGGTCTACGGCGATTACCCACCGGAGATGCGCCAGATTCTCGGCGGGAGGCTGCCGAGTTTCTCGCCGGAGGACAGGAGGAAGCTGCGGTACAAGCTGGACTTCATCGGGGTGAACCACTACACGACCCTGTACGCCAGGGACTGCATGTTCTCAGACTGCCCACAGGGGCAGGAGACGCAGCACGCGCTGGCGGCTGTCACTGGAGAGAGCAACGGGCTTCCCATTGGAACTCCAGATTTAAGGGGTTAAAGAATGTACTTGCAGACAGCGATGCCCACTTTCTACGTGGTACCGGACGGGATTGAGAAGATGGTCAAGTACTTCATGAGAAGATACAACAACCTGCCAATGTTCATCAC]


>consensus_11846#0 CGCACACGTGTTGTACTATACCCCTTTGTTGGGTTCTTTGCCTCATATAAGGTTAGAAGA AGGTTAGAAGAGGCTAGATATAATCAGCATTGCAGCCTTCGCGACAAGTTCAGAAGATAT ATGGCAGGAGGCAGTAAGACGCGGATCCATGCCTCGCTCGTTTCCACTCTCCTGCTGCTG CTCCCATTGGCGTCTGCGATCCACAGGAGCGACTTCCCGGCGTCGTTCCTCTTCGGCACG GCCACCTCCTCGTATCAGATTGAAGGTGCATATCTAGAAGGCAACAAAAGTTTAAGCAAT TGGGATGTGTTCACTCATCTACCAGGAAATATCAAGGATGGAAGCAACGGAGATATCGCG GATGATCATTATCACCGCTACGAGGAGGACGTCGAGCTGATGAACTCCCTCGGCGTAAAT GCCTATAGATTCTCGATATCATGGTCCAGAATCCTTCCAAAAGGGAGATTTGGTGGAGTC AACCCAGCGGGCATTGATTTCTACAACAAACTTATCGATTCAATTTTACTGAAAGGAATA CAGCCATTTGTCACCCTGACACACTACGACATCCCACAGGAGCTCGAAGACAGATACGGA GCTTGGCTCAACGCCGAGATACAGTCGGATTTCGGGCACTTCGCCGACGTCTGCTTCGGC GCGTTCGGCGACCGCGTCAAGTACTGGACCACCTTCAACGAGCCCAACGTCGCGGTGCGG CATGGCTACATGCTCGGCACCTACCCGCCGTCCCGCTGCTCGCCGCCGTTCGGCCACTGC GCCCCGCGGCGGCGACTCACACGCCGAGCCCTACGTCGCCGCCCACAACGTGATACTCTC GCACGCCACCGCCATCGAGATATACAAGAGAAAGTACCAGAGCAAGCAGAGAGGAATGAT TGGCATGGTGTTGTACAGCACCTGGTACGAGCCGCTGAGAGATGTCCCCGAGGACCGGCT TGCCACCGAGCGAGCCTTGGCGTTCGAAACTCCGTGGTACTACTACGAATTATAAGATCA CTCGCTCCATTGCAGTGATTGAACGTGCTCGTAAAAAAATGTGGATTTGTTCTGAATCAA CAGAGGTTTTCTTCCGATTTTTGCCTGTATGTACTCTTGCAGGTTTCTTGATCCACTGGT CTACGGCGATTACCCACCGGAGATGCGCCAGATTCTCGGCGGGAGGCTGCCGAGTTTCTC GCCGGAGGACAGGAGGAAGCTGCGGTACAAGCTGGACTTCATCGGGGTGAACCACTACAC GACCCTGTACGCCAGGGACTGCATGTTCTCAGACTGCCCACAGGGGCAGGAGACGCAGCA CGCGCTGGCGGCTGTCACTGGAGAGAGCAACGGGCTTCCCATTGGAACTCCAGATTTAAG GGGTTAAAGAATGTACTTGCAGACAGCGATGCCCACTTTCTACGTGGTACCGGACGGGAT TGAGAAGATGGTCAAGTACTTCATGAGAAGATACAACAACCTGCCAATGTTCATCAC



consensusID : consensus_11846#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 917
fasta sequence
                              [GCAGAGAGGAATGATTGGCCTGGTGTTGTACAGCACCTGGTACGAGCCGCTGAGAGATGTCCCCGAGGACCGGCTTGCCACCGAGCGAGCCTTGGCGTTCGAAACTCCGTGGTTTCTTGATCCACTGGTCTACGGCGATTACCCACCGGAGATGCGCCAGATTCTCGGCGGGAGGCTGCCGAGTTTCTCGCCGGAGGACAGGAGGAAGCTGCGGTACAAGCTGGACTTCATCGGGGTGAACCACTACACGACCCTGTACGCCAGGGACTGCATGTTCTCAGACTGCCCACAGGGGCAGGAGACGCAGCACGCGCTGGCGGCTGTCACTGGAGAGAGCAACGGGCTTCCCATTGGAACTCCAACAGCGATGCCCACTTTCTACGTGGTACCGGACGGGATTGAGAAGATGGTCAAGTACTTCATGAGAAGATACAACAACCTGCCAATGTTCATCACAGAAAACGGATACGCGCAAGGTGGAGATAGTTACACCGACGCAGAGGATTGGATTGATGACGAGGATAGGATAGAGTACCTGGAAGGCTATCTCACAAAACTTGCCAAAGTTATCAGGGACGGAGCTGATGTTCGTGGCTACTTCGCCTGGTCCGTCGTTGACAATTTCGAGTGGTTGTTTGGGTACACCCTTCGATTTGGACTGTACTACATAGACTACAGAACACAGGAAAGATCTCCAAAGCTATCTGCGCTGTGGTACAAGGAATTCCTCCAAAATCTGCATGAAAATCAATAGATAAAGTTGTACTTTCGAATTTAAATAGGGTGTAAAATGATAGTAATTCGTGTAATGATGTAACTGTAGTACTGTACATTAGTACATAATGTTGATTAGAATGGATACATGATATCCACCTATATATATCCAATTTATTGGACAATTTACTGTAAATTTATGG]

[+] EMBL AK058333             [GCAGAGAGGAATGATTGGCCTGGTGTTGTACAGCACCTGGTACGAGCCGCTGAGAGATGTCCCCGAGGACCGGCTTGCCACCGAGCGAGCCTTGGCGTTCGAAACTCCGTGGTTTCTTGATCCACTGGTCTACGGCGATTACCCACCGGAGATGCGCCAGATTCTCGGCGGGAGGCTGCCGAGTTTCTCGCCGGAGGACAGGAGGAAGCTGCGGTACAAGCTGGACTTCATCGGGGTGAACCACTACACGACCCTGTACGCCAGGGACTGCATGTTCTCAGACTGCCCACAGGGGCAGGAGACGCAGCACGCGCTGGCGGCTGTCACTGGAGAGAGCAACGGGCTTCCCATTGGAACTCCAACAGCGATGCCCACTTTCTACGTGGTACCGGACGGGATTGAGAAGATGGTCAAGTACTTCATGAGAAGATACAACAACCTGCCAATGTTCATCACAGAAAACGGATACGCGCAAGGTGGAGATAGTTACACCGACGCAGAGGATTGGATTGATGACGAGGATAGGATAGAGTACCTGGAAGGCTATCTCACAAAACTTGCCAAAGTTATCAGGGACGGAGCTGATGTTCGTGGCTACTTCGCCTGGTCCGTCGTTGACAATTTCGAGTGGTTGTTTGGGTACACCCTTCGATTTGGACTGTACTACATAGACTACAGAACACAGGAAAGATCTCCAAAGCTATCTGCGCTGTGGTACAAGGAATTCCTCCAAAATCTGCATGAAAATCAATAGATAAAGTTGTACTTTCGAATTTAAATAGGGTGTAAAATGATAGTAATTCGTGTAATGATGTAACTGTAGTACTGTACATTAGTACATAATGTTGATTAGAATGGATACATGATATCCACCTATATATATCCAATTTATTGGACAATTT               ]
[-] EMBL CB633740             [                                                                                                                                               CACCGGAGATGCGCCAGATTCTCGGCGGGAGGCTGCCGAGTTTCTCGCCGGAGGACAGGAGGAAGCTGCGGTACAAGCTGGACTTCATCGGGGTGAACCACTACACGACCCTGTACGCCAGGGACTGCATGTTCTCAGACTGCCCACAGGGGCAGGAGACGCAGCACGCGCTGGCGGCTGTCACTGGAGAGAGCAACGGGCTTCCCATTGGAACTCCAACAGCGATGCCCACTTTCTACGTGGTACCGGACGGGATTGAGAAGATGGTCAAGTACTTCATGAGAAGATACAACAACCTGCCAATGTTCATCACAGAAAACGGATACGCGCAAGGTGGAGATAGTTACACCGACGCAGAGGATTGGATTGATGACGAGGATAGGATAGAGTACCTGGAAGGCTATCTCACAAAACTTGCCAAAGTTATCAGGGACGGAGCTGATGTTCGTGGCTACTTCGCCTGGTCCGTCGTTGACAATTTCGAGTGGTTGTTTGGGTACACCCTTCGATTTGGACTGTACTACATAGACTACAGAACACAGGAAAGATCTCCAAAGCTATCTGCGCTGTGGTACAAGGAATTCCTCCAAAATCTGCATGAAAATCAATAGATAAAGTTGTACTTTCGAATTTAAATAGGGTGTAAAATGATAGTAATTCGTGTAATGATGTAACTGTAGTACTGTACATTAGTACATAATGTTGATTGGAATGGATACATGATATCCACCTATATATATC                                 ]
[-] EMBL CB634194             [                                                                                                                                                               GATTCTCGGCGGGAGGCTGCCGAGTTTCTCGCCGGAGGACAGGAGGAAGCTGCGGTACAAGCTGGACTTCATCGGGGTGAACCACTACACGACCCTGTACGCCAGGGACTGCATGTTCTCAGACTGCCCACAGGGGCAGGAGACGCAGCACGCGCTGGCGGCTGTCACTGGAGAGAGCAACGGGCTTCCCATTGGAACTCCAACAGCGATGCCCACTTTCTACGTGGTACCGGACGGGATTGAGAAGATGGTCAAGTACTTCATGAGAAGATACAACAACCTGCCAATGTTCATCACAGAAAACGGATACGCGCAAGGTGGAGATAGTTACACCGACGCAGAGGATTGGATTGATGACGAGGATAGGATAGAGTACCTGGAAGGCTATCTCACAAAACTTGCCAAAGTTATCAGGGACGGAGCTGATGTTCGTGGCTACTTCGCCTGGTCCGTCGTTGACAATTTCGAGTGGTTGTTTGGGTACACCCTTCGATTTGGACTGTACTACATAGACTACAGAACACAGGAAAGATCTCCAAAGCTATCTGCGCTGTGGTACAAGGAATTCCTCCAAAATCTGCATGAAAATCAATAGATAAAGTTGTACTTTCGAATTTAAATAGGGTGTAAAATGATAGTAATTCGTGTAATGATGTAACTGTAGTACTGTACATTAGTACATAATGTTGATTAGAATGGATACATGATATCCACAAGTATATATCCAATTTATTGGACAATTTACTGTAAATTTATGG]
[-] EMBL CB633786             [                                                                                                                                                               GATTCTCGGCGGGAGGCTGCCGAGTTTCTCGCCGGAGGACAGGAGGAAGCTGCGGTACAAGCTGGACTTCATCGGGGTGAACCACTACACGACCCTGTACGCCAGGGACTGCATGTTCTCAGACTGCCCACAGGGGCAGGAGACGCAGCACGCGCTGGCGGCTGTCACTGGAGAGAGCAACGGGCTTCCCATTGGAACTCCAACAGCGATGCCCACTTTCTACGTGGTACCGGACGGGATTGAGAAGATGGTCAAGTACTTCATGAGAAGATACAACAACCTGCCAATGTTCATCACAGAAAACGGATACGCGCAAGGTGGAGATAGTTACACCGACGCAGAGGATTGGATTGATGACGAGGATAGGATAGAGTACCTGGAAGGCTATCTCACAAAACTTGCCAAAGTTATCAGGGACGGAGCTGATGTTCGTGGCTACTTCGCCTGGTCCGTCGTTGACAATTTCGAGTGGTTGTTTGGGTACACCCTTCGATTTGGACTGTACTACATAGACTACAGAACACAGGAAAGATCTCCAAAGCTATCTGCGCTGTGGTACAAGGAATTCCTCCAAAATCTGCATGAAAATCAATAGATAAAGTTGTACTTTCGAATTTAAATAGGGTGTAAAATGATAGTAATTCGTGTAATGATGTAACTGTAGTACTGTACATTAGTACATAATGTTGATTAGAATGGATACATGATATCCACCTATATATATCCAAaaaaaaga                      ]


>consensus_11846#1 GCAGAGAGGAATGATTGGCCTGGTGTTGTACAGCACCTGGTACGAGCCGCTGAGAGATGT CCCCGAGGACCGGCTTGCCACCGAGCGAGCCTTGGCGTTCGAAACTCCGTGGTTTCTTGA TCCACTGGTCTACGGCGATTACCCACCGGAGATGCGCCAGATTCTCGGCGGGAGGCTGCC GAGTTTCTCGCCGGAGGACAGGAGGAAGCTGCGGTACAAGCTGGACTTCATCGGGGTGAA CCACTACACGACCCTGTACGCCAGGGACTGCATGTTCTCAGACTGCCCACAGGGGCAGGA GACGCAGCACGCGCTGGCGGCTGTCACTGGAGAGAGCAACGGGCTTCCCATTGGAACTCC AACAGCGATGCCCACTTTCTACGTGGTACCGGACGGGATTGAGAAGATGGTCAAGTACTT CATGAGAAGATACAACAACCTGCCAATGTTCATCACAGAAAACGGATACGCGCAAGGTGG AGATAGTTACACCGACGCAGAGGATTGGATTGATGACGAGGATAGGATAGAGTACCTGGA AGGCTATCTCACAAAACTTGCCAAAGTTATCAGGGACGGAGCTGATGTTCGTGGCTACTT CGCCTGGTCCGTCGTTGACAATTTCGAGTGGTTGTTTGGGTACACCCTTCGATTTGGACT GTACTACATAGACTACAGAACACAGGAAAGATCTCCAAAGCTATCTGCGCTGTGGTACAA GGAATTCCTCCAAAATCTGCATGAAAATCAATAGATAAAGTTGTACTTTCGAATTTAAAT AGGGTGTAAAATGATAGTAATTCGTGTAATGATGTAACTGTAGTACTGTACATTAGTACA TAATGTTGATTAGAATGGATACATGATATCCACCTATATATATCCAATTTATTGGACAAT TTACTGTAAATTTATGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11846#0      CGCACACGTGTTGTACTATACCCCTTTGTTGGGTTCTTTGCCTCATATAAGGTTAGAAGA 60
consensus_11846#1      ------------------------------------------------------------
                                                                                   

consensus_11846#0      AGGTTAGAAGAGGCTAGATATAATCAGCATTGCAGCCTTCGCGACAAGTTCAGAAGATAT 120
consensus_11846#1      ------------------------------------------------------------
                                                                                   

consensus_11846#0      ATGGCAGGAGGCAGTAAGACGCGGATCCATGCCTCGCTCGTTTCCACTCTCCTGCTGCT- 179
consensus_11846#1      -----------------------------------------------------GCAGAGA 7
                                                                            ** *   

consensus_11846#0      GCTCCCATTGGCGTCTGCGATCCACAGGAGCGACTTCCCGGCGTCGTTCCTCTTCGGCAC 239
consensus_11846#1      GGAATGATTGGCCTG-GTGTTGTACAGCACCTGGTACGAGCCGCTGAGAGATGTC--CCC 64
                       *     ****** *  * * *  **** * *   * *  * **  *       **  * *

consensus_11846#0      GGCCACCTCCTCGTATCAGATTGAAGGTGCATATCTAGAAGGCAACAAAAGTTTAAGCAA 299
consensus_11846#1      GAGGACCGGCTTGCCACCGAGCGAGCCTTGGCGTTCGAAACTCCGTGGTTTCTTGATCCA 124
                       *   ***  ** *   * **  **   *     *    **  *         ** * * *

consensus_11846#0      TTGGGATGTGTTCACTCATCTACCAGGAAATATCAAGGATGGAAGCAACGGAGATATCGC 359
consensus_11846#1      CTGGTCTACGG-CGATTACCCACCGGAGATGCGCCAGATTCTCGGC----GGGAGGCTGC 179
                        ***  *  *  *  * * * *** *  *    * **  *    **    * **    **

consensus_11846#0      GGATGATCATTATCACCGCTACGAGGAGGACGTCGAGCTGA-TGAACTCCCTCGGCGTAA 418
consensus_11846#1      CGAGTTTCTCGCCGGAGGACAGGAGGAAGCTGCGGTACAAGCTGGACTTCATCGGGGTGA 239
                        **   **         *  * ***** *  *  *  *    ** *** * **** ** *

consensus_11846#0      ATGCCTATA-GATTCTCGATATCATGGTCCAGAATCCTTCCAAAAGGGAGATTTGGTGGA 477
consensus_11846#1      ACCACTACACGACCCTGTACGCCAGGGACT-GCATGTTCTCAGACTGCCCACA-GGGGCA 297
                       *   *** * **  **  *   ** ** *  * **  *  ** *  *   *   ** * *

consensus_11846#0      GTCAACCCAGCGGGCATTGATTTCTACAAC-AAACTTATCGATTCAATTTT-ACTGAAAG 535
consensus_11846#1      GGAGACGCAGCACGCGCTGGCGGCTGTCACTGGAGAGAGCAACGGGCTTCCCATTGGAAC 357
                       *   ** ****  **  **    **   **   *   * * *     **   * ** ** 

consensus_11846#0      GAATACAGCCATTTGTCACCCTGACACACTACGACATCCCACAGGAGCTCGAAGACAGAT 595
consensus_11846#1      TCCAACAGCGA--TGCCCACTTTCTAC---GTGGTACCGGACGGGATTGAGAAGATGGTC 412
                           ***** *  ** *  * *   **     *  * *  ** ***    *****  *  

consensus_11846#0      ACGGAGCTTGGCTCAACGCCGAGATACAGTCGGATTTCGG-GCACTTCGCCGACGTCTGC 654
consensus_11846#1      AAGTA------CTTCATGAGAAGATACAACAACCTGCCAATGTTCATCACAGAAAACGGA 466
                       * * *      **  * *   *******      *  *   *  * ** * **   * * 

consensus_11846#0      TTCGGCGCGTTCGGCGACCGCGTCAAGTACTGGACCACCTTCAACGAGCCCAACGTCGCG 714
consensus_11846#1      T---ACGCGCAAGGTG---GAGATAGTTACACCGACGCAGAGGATTGGATTGATGACGAG 520
                       *    ****   ** *   * *  *  ***     * *     *   *    * * ** *

consensus_11846#0      GTGCGGCATGGCTACATGCTCGGCACCTACCCGCCGTCCCGCTGCTCGCCGCCGTT--CG 772
consensus_11846#1      GATAGGATAGAGTACCTG---GAAGGCTATC-----TCACAAAACTTGCCAAAGTTATCA 572
                       *   **   *  *** **   *    *** *     ** *    ** ***   ***  * 

consensus_11846#0      GCCACTGCGCCCCGCGGCGGCGACTCACACGCCGAGCCCTACGTCGCCGCCCACAACGTG 832
consensus_11846#1      GGGACGGAGCTG-ATGTTCGTGGCTACTTCGCCTGGTCCGTCGTTGACAATTTCGAGTGG 631
                       *  ** * **     *   * * **    ****  * **  *** * *     * *   *

consensus_11846#0      ATACTCTCGCACGCCACCGCCATCGAGATATACAAGAGAAAGTACCAGAGCAAGCAGAGA 892
consensus_11846#1      TTGTTTGGGTACACCCTTCGATTTGGACTGTACTACATAGACTAC-------AGAACACA 684
                        *  *   * ** **       * *   * *** * * * * ***       ** * * *

consensus_11846#0      GGAATGATTGGCATGGTGTTGTACAGCACCTGGTACGAGCCGCTGAGAGATGTCCCCGAG 952
consensus_11846#1      GGAAAGATCTCCAAAGCTATCTGCGCTG--TGGTACAAG---------GAATTCCTCCAA 733
                       **** ***   **  *   * * *      ****** **         **  *** * * 

consensus_11846#0      GACCGGCTTG----CCACCGAGCGAGCCTTGGCGTTCGAAACTCCGTGGTACTACTACGA 1008
consensus_11846#1      AATCTGCATGAAAATCAATAGATAAAGTTGTACTTTCGAATTTAAATAGGG----TGTAA 789
                        * * ** **     **       *   *   * ******  *   * *      *   *

consensus_11846#0      ATTATAAGATCACTCGCTCCATTGCAGTGATTGAACGTGCT-CGTAAAAAAATGTGGATT 1067
consensus_11846#1      A--ATGATAGTAATTCGTGTAATGATGTAACTGTA-GTACTGTACATTAGTACATAATGT 846
                       *  ** * *  * *   *  * **  ** * ** * ** **    *  *  *  *    *

consensus_11846#0      TGTTCTGAATCAACAGAGGTTTTCTTCCGATTTTTGCCTGTATGTACTCTTGCAGGTTTC 1127
consensus_11846#1      TGATTAGAATGGATACATGATATCCACCTATATATATCCA-ATTTATTGG-ACAATTTAC 904
                       ** *  ****  * * * * * **  ** ** * *  *   ** ** *    **  ** *

consensus_11846#0      T-TGATCCACTGGTCTACGGCGATTACCCACCGGAGATGCGCCAGATTCTCGGCGGGAGG 1186
consensus_11846#1      TGTAAATTTATGG----------------------------------------------- 917
                       * * *     ***                                               

consensus_11846#0      CTGCCGAGTTTCTCGCCGGAGGACAGGAGGAAGCTGCGGTACAAGCTGGACTTCATCGGG 1246
consensus_11846#1      ------------------------------------------------------------
                                                                                   

consensus_11846#0      GTGAACCACTACACGACCCTGTACGCCAGGGACTGCATGTTCTCAGACTGCCCACAGGGG 1306
consensus_11846#1      ------------------------------------------------------------
                                                                                   

consensus_11846#0      CAGGAGACGCAGCACGCGCTGGCGGCTGTCACTGGAGAGAGCAACGGGCTTCCCATTGGA 1366
consensus_11846#1      ------------------------------------------------------------
                                                                                   

consensus_11846#0      ACTCCAGATTTAAGGGGTTAAAGAATGTACTTGCAGACAGCGATGCCCACTTTCTACGTG 1426
consensus_11846#1      ------------------------------------------------------------
                                                                                   

consensus_11846#0      GTACCGGACGGGATTGAGAAGATGGTCAAGTACTTCATGAGAAGATACAACAACCTGCCA 1486
consensus_11846#1      ------------------------------------------------------------
                                                                                   

consensus_11846#0      ATGTTCATCAC 1497
consensus_11846#1      -----------
                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)