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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11873#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2101 fasta sequence
[GCCTCCTCCCATCATTCGATCACTCCTCCTCCTCCCTCCTCTCTCCCTCCCTCCGCGACCCAACAAGGAAGACGACGAAGAGGAGGAGAGAGAAGAGGAGGAGGAGGAGGAAAAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGATTCGATTCCTTTCGTCCGGCGCGGCCAACCCGAAAGGCTGCGGCCGTCGCAGTCCAATCGATTCCCCCCCTGCGCTGCGCTGCGCTTTCCCACCCCTCGAAGCCGAATCCGATGGTTCCTCCACCCGTTGACCGCCTCCGCCATCGGAGGCCGCGCCGCGCCCTCGAACCCCGCGCCGCCTGCTGCTGCCTCCGCCGCCTCCGCCTCCTATAGATACCGCCCCGGCTCACCGCGGCCCGGCCCTCCCGAATGGCGGTCGGCGGCGACGACGACATGGAGAGGGACTTCGCCGCCAGGCTCCGCCTCGCGCCCTCCCCCGCCTCCCCGAACGCCGCCGCCGGAGGTGGCGGTGGCGGGATCGCCTTCCGCGCGCCGCAGGAGCAGTTCACCGTCGGCGACTTCGAGCTTGGCAAGATCTACGGCGTCGGCTCCTACTCCAAGGTGGTGAGGGCCAAGAAGAAGGATACGGGGAATGTGTACGCGCTCAAGATCATGGACAAGAAGTTCATCACCAAGGAGAACAAGATCTCCTACGTCAAGATGGAGCGCATCGTGCTCGATCAGCTGGATCACCCGGGCGTCATCAGGCTCTTCTTCACCTTCCAGGACACCTACTCCCTCTATATGGCGCTTGAGTCGTGTGAAGGTGGGGAGCTGTTTGACCAAATTGTTCGGAAAGGTCGCCTGTCTGAGGATGAGGCCCGGTTTTATGCTGCTGAAATTGTTGATATTCTGGAGTATTTGCATAGTTTAGGCCTAATTCATCGGGATGTTAAGCCAGAAAATTTACTGCTTACTTCTGATGGGCACATCAAGATTGCCGATTTTGGTAGTGTGAAGCCTACAAAGGACACCCCGATCAAAGTCCTTCCAAATTCCACTAACGAGAGGGCCTGTACATTTGTTGGGACAGCTGCATATGTACCACCTGAGGTCCTGAACTCTGCCCCACCAACCTTTGGAAATGACTTATGGGCATTGGGGTGTACTCTATATCAATTGCTTTCTGGCTCTTCACCATTTAAAGATGCCAGTGAGTGGTTAATTTTCCAGAGAATTATAGCACGCGATCTCAAAATTCCTGAGTACTTCTCAGATGATGCAAGGGATCTCATTGACAAGCTGCTGGATGTCGACCCAAGCAAACGTCCAGGTGCAGGACCTGATGGTTATGTGTCATTGAAGAAACATCCTTTTTTTAGAGGCATTGATTGGAAAAATATAAGGAGCACACGGGCACCGAAGCTTGCAATGGAGGCAAATGCAAATGAGGATGAAGATAGTCAGGATTCAAGTTGGTTGTCACACATGGGAAGTGCTCCAGTCAACCAACATGTCAGTCCTGTTGGGAATGATGGTGCCTCATCATCTTCTGAAGTACGCTCCCATATATCTAGATTAGCTTCCATCGACTCCTTCGACTCTAGATGGCAGGACTTCCTGGAGCCTGGCGAATCTGTCGTTCTAATATCAAAACTGAAGAAGATAAACAAGCTAACGAACAAGAAGGTTCAGTTGATCCTCACCGACAAACCACAGCTGATCTGTGTAGATCCTGGAAAAATGGTGACTAAAGGGAACATCATGTGGTCTGATGA-CCCAAGTGAACTCAATGTGCAAGTATCAAACTCTTCGCATTTCAGGATATGCACGCCAAAGAAGGTGTCATCGTTTGAGGATGCAAAACAGCGCGCCTGGCA-ATGGAAGAAGGCGATCGAAGACCTACAACGCTGCCAGAAGAACTGACCATGACCAACTCAAGACGTCAAAATGGTGATATTAAGCATTGTGTATACACCATAGCCATCCTTTTCGCCTGGAGGAACATGGGGGAGACTATTGTTCCTGGTCTCCTGCATCTGTGCCCGATTGCAACGAAGTCTCAACAGTTGGCACATCGATGGATGTTCCTACATTTTTTTGTTTTCTTTTCCGGCCCTGCTAAATTCTCTTAT]
[+] EMBL AK073712 [GCCTCCTCCCATCATTCGATCACTCCTCCTCCTCCCTCCTCTCTCCCTCCCTCCGCGACCCAACAAGGAAGACGACGAAGAGGAGGAGAGAGAAGAGGAGGAGGAGGAGGAAAAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGATTCGATTCCTTTCGTCCGGCGCGGCCAACCCGAAAGGCTGCGGCCGTCGCAGTCCAATCGATTCCCCCCCTGCGCTGCGCTGCGCTTTCCCACCCCTCGAAGCCGAATCCGATGGTTCCTCCACCCGTTGACCGCCTCCGCCATCGGAGGCCGCGCCGCGCCCTCGAACCCCGCGCCGCCTGCTGCTGCCTCCGCCGCCTCCGCCTCCTATAGATACCGCCCCGGCTCACCGCGGCCCGGCCCTCCCGAATGGCGGTCGGCGGCGACGACGACATGGAGAGGGACTTCGCCGCCAGGCTCCGCCTCGCGCCCTCCCCCGCCTCCCCGAACGCCGCCGCCGGAGGTGGCGGTGGCGGGATCGCCTTCCGCGCGCCGCAGGAGCAGTTCACCGTCGGCGACTTCGAGCTTGGCAAGATCTACGGCGTCGGCTCCTACTCCAAGGTGGTGAGGGCCAAGAAGAAGGATACGGGGAATGTGTACGCGCTCAAGATCATGGACAAGAAGTTCATCACCAAGGAGAACAAGATCTCCTACGTCAAGATGGAGCGCATCGTGCTCGATCAGCTGGATCACCCGGGCGTCATCAGGCTCTTCTTCACCTTCCAGGACACCTACTCCCTCTATATGGCGCTTGAGTCGTGTGAAGGTGGGGAGCTGTTTGACCAAATTGTTCGGAAAGGTCGCCTGTCTGAGGATGAGGCCCGGTTTTATGCTGCTGAAATTGTTGATATTCTGGAGTATTTGCATAGTTTAGGCCTAATTCATCGGGATGTTAAGCCAGAAAATTTACTGCTTACTTCTGATGGGCACATCAAGATTGCCGATTCTGGTAGTGTGAAGCCTACAAAGGACACCCCGATCAAAGTCCTTCCAAATTCCACTAACGAGAGGGCCTGTACATTTGTTGGGACAGCTGCATATGTACCACCTGAGGTCCTGAACTCTGCCCCACCAACCTTTGGGAATGACTTATGGGCATTGGGGTGTACTCTATATCAATTGCTTTCTGGCTCTTCACCATTTAAAGATGCCAGTGAGTGGTTAATTTTCCAGAGAATTATAGCACGCGATCTCAGAATTCCTGAGTACTTCTCAGATGATGCAAGGGATCTCATTGACAAGCTGCTGGATGTCGACCCAAGCAAACGTCCAGGTGCAGGACCTGATGGTTATGTGTCATTGAAGAAACATCCTTTTTTTAGAGGCATTGATTGGAAAAATATAAGGAGCACACGGGCACCGAAGCTTGCAATGGAGGCAAATGCAAATGAGGATGAAGATAGTCAGGATTCAAGTTGGTTGTCACACATGGGAAGTGCTCCAGTCAACCAACATGTCAGTCCTGTTGGGAATGATGGTGCCTCATCATCTTCTGAAGTACGCTCCCATATATCTAGATTAGCTTCCATCGACTCCTTCGACTCTAGATGGCAGGACTTCCTGGAGCCTGGCGAATCTGTCGTTCTAATATCAAAACTGAAGAAGATAAACAAGCTAACGAACAAGAAGGTTCAGTTGATCCTCACCGACAAACCACAGCTGATCTGTGTAGATCCTGGAAAAATGGTGACTAAAGGGAACATCATGTGGTCTGATGA CCCAAGTGAACTCAATGTGCAAGTATCAAACTCTTCGCATTTCAGGATATGCACGCCAAAGAAGGTGTCATCGTTTGAGGATGCAAAACAGCGCGCCTGGCA ATGGAAGAAGGCGATCGAAGACCTACAACGCTGCCAGAAGAACTGACCATGACCAACTCAAGACGTCAAAATGGTGATATTAAGCATTGTGTATACACCATAGCCATCCTTTTCGCCTGGAGGAACATGGGGGAGACTATTGTTCCTGGTCTCCTGCATCTGTGCCCGATTGCAACGAAGTCTCAACAGTTGGCACATCGATGGATGTTCCTACATTTTTTTGTTTTCTTTTCCGGCCCTGCTAAATTCTCTTA ]
[+] EMBL CB629660 [ gagcgcAGGAGGAGGAAAAG CTCTCTCTCTCTCTCTCTCTAGATTCGATTCCTTTCGTCCGGCGCGGCCAACCCGAAAGGCTGCGGCCGTCGCAGTCCAATCGATTCCCCCCCTGCGCTGCGCTGCGCTTTCCCACCCCTCGAAGCCGAATCCGATGGTTCCTCCACCCGTTGACCGCCTCCGCCATCGGAGGCCGCGCCGCGCCCTCGAACCCCGCGCCGCCTGCTGCTGCCTCCGCCGCCTCCGCCTCCTATAGATACCGCCCCGGCTCACCGCGGCCCGGCCCTCCCGAATGGCGGTCGGCGGCGACGACGACATGGAGAGGGACTTCGCCGCCAGGCTCCGCCTCGCGCCCTCCCCCGCCTCCCCGACCACCGCCGCCGGAGGTGGCGGTGGCGGGATCGCCTTCCGCGCGCCGCAGGAGCAGTTCACCGTCGGCGACTTCGAGCTTGGCAAGATCTACGGCGTCGGCTCCTACTCCAAGGTGGTGAGGGCCAAGAAGAAGGATACGGGGAATGTGTACGCGCTCAAGATCATGGACAAGAAGTTCATCACCAAGGAGAACAAGATCTCCTACGTCAAGATGGAGCGCATCGTGCTCGATCAGCTGGATCACCCGGGCGTCATCAGGCTCTTCTTCACCTTCCAGGACACCTACTCCCTCTATATGGCGCTTGAGTCGTGTGAAGGTGGGGAGCTGTTTGACCAAATTGTTCGGAAAGGTCGCCTGTCTGAGGATGAGGCCCGGTTTTATGCTGCTGAAATTG ]
[+] EMBL AK062100 [ TCCTACTCCAAGGTGGTGAGGGCCAAGAAGAAGGATACGGGGAATGTGTACGCGCTCAAGATCATGGACAAGAAGTTCATCACCAAGGAGAACAAGATCTCCTACGTCAAGATGGAGCGCATCGTGCTCGATCAGCTGGATCACCCGGGCGTCATCAGGCTCTTCTTCACCTTCCAGGACACCTACTCCCTCTATATGGCGCTTGAGTCGTGTGAAGGTGGGGAGCTGTTTGACCAAATTGTTCGGAAAGGTCGCCTGTCTGAGGATGAGGCCCGGTTTTATGCTGCTGAAATTGTTGATATTCTGGAGTATTTGCATAGTTTAGGCCTAATTCATCGGGATGTTAAGCCAGAAAATTTACTGCTTACTTCTGATGGGCACATCAAGATTGCCGATTTTGGTAGTGTGAAGCCTACAAAGGACACCCCGATCAAAGTCCTTCCAAATTCCACTAACGAGAGGGCCTGTACATTTGTTGGGACAGCTGCATATGTACCACCTGAGGTCCTGAACTCTGCCCCACCAACCTTTGGAAATGACTTATGGGCATTGGGGTGTACTCTATATCAATTGCTTTCTGGCTCTTCACCATTTAAAGATGCCAGTGAGTGGTTAATTTTCCAGAGAATTATAGCACGCGATCTCAAAATTCCTGAGTACTTCTCAGATGATGCAAGGGATCTCATTGACAAGCTGCTGGATGTCGACCCAAGCAAACGTCCAGGTGCAGGACCTGATGGTTATGTGTCATTGAAGAAACATCCTTTTTTTAGAGGCATTGATTGGAAAAATATAAGGAGCACACGGGCACCGAAGCTTGCAATGGAGGCAAATGCAAATGAGGATGAAGATAGTCAGGATTCAAGTTGGTTGTCACACATGGGAAGTGCTCCAGTCAACCAACATGTCAGTCCTGTTGGGAATGATGGTGCCTCATCATCTTCTGAAGTACGCTCCCATATATCTAGATTAGCTTCCATCGACTCCTTCGACTCTAGATGGCAGGACTTCCTGGAGCCTGGCGAATCTGTCGTTCTAATATCAAAACTGAAGAAGATAAACAAGCTAACGAACAAGAAGGTTCAGTTGATCCTCACCGACAAACCACAGCTGATCTGTGTAGATCCTGGAAAAATGGTGACTAAAGGGAACATCATGTGGTCTGATGA CCCAAGTGAACTCAATGTGCAAGTATCAAACTCTTCGCATTTCAGGATATGCACGCCAAAGAAGGTGTCATCGTTTGAGGATGCAAAACAGCGCGCCTGGCA ATGGAAGAAGGCGATCGAAGACCTACAACGCTGCCAGAAGAACTGACCATGACCAACTCAAGACGTCAAAATGGTGATATTAAGCATTGTGTATACACCATAGCCATCCTTTTCGCCTGGAGGAACATGGGGGAGACTATTGTTCCTGGTCTCCTGCATCTGTGCCCGATTGCAACGAAGTCTCAACAGTTGGCACATCGATGGATGTTCCTACATTTTTTTGTTTTCTTTTCCGGCCCTGCTAAATTCTCTTA ]
[+] EMBL AF132743 [ TATGCTGCTGAAATTGTTGATATTCTGGAGTATTTGCATAGTTTAGGCCTAATTCATCGGGATGTTAAGCCAGAAAATTTACTGCTTACTTCTGATGGGCACATCAAGATTGCCGATTTTGGTAGTGTGAAGCCTACAAAGGACACCCCGATCAAAGTCCTTCCAAATTCCACTAACGAGAGGGCCTGTACATTTGTTGGGACAGCTGCATATGTACCACCTGAGGTCCTGAACTCTGCCCCACCAACCTTTGGAAATGACTTATGGGCATTGGGGTGTACTCTATATCAATTGCTTTCTGGCTCTTCACCATTTAAAGATGCCAGTGAGTGGTTAATTTTCCAGAGAATTATAGCACGCGATCTCAAAATTCCTGAGTACTTCTCAGATGATGCAAGGGATCTCATTGACAAGCTGCTGGATGTCGACCCAAGCAAACGTCCAGGTGCAGGACCTGATGGTTATGTGTCATTGAAGAAACATCCTTTTTTTAGAGGCATTGATTGGAAAAATATAAGGAGCACACGGGCACCGAAGCTTGCAATGGAGGCAAATGCAAATGAGGATGAAGATAGTCAGGATTCAAGTTGGTTGTCACACATGGGAAGTGCTCCAGTCAACCAACATGTCAGTCCTGTTGGGAATGATGGTGCCTCATCATCTTCTGAAGTACGCTCCCATATATCTAGATTAGCTTCCATCGACTCCTTCGACTCTAGATGGCAGGACTTCCTGGAGCCTGGCGAATCTGTCGTTCTAATATCAAAACTGAAGAAGATAAACAAGCTAACGAACAAGAAGGTTCAGTTGATCCTCACCGACAAACCACAGCTGATCTGTGTAGATCCTGGAAAAATGGTGACTAAAGGGAACATCATGTGGTCTGATGA CCCAAGTGAACTCAATGTGCAAGTATCAAACTCTTCGCATTTCAGGATATGCACGCCAAAGAAGGTGTCATCGTTTGAGGATGCAAAACAGCGCGCCTGGCA ATGGAAGAAGGCGATCGAAGACCTACAACGCTGCCAGAAGAACTGACCATGACCAACTCAAGACGTCAAAATGGTGATATTAAGCATTGTGTATACACCATAGCCATCCTTTTCGCCTGGAGGAACATGGGGGAGACTATTGTTCCTGGTCTCCTGCATCTGTGCCCGATTGCAACGAAGTCTCAACAGTTGGCACATCGATGGATGTTCCTACATTTTTTTGTTTTCTTTTCCGGCCCTGCTAAATTCTCTTA ]
[+] EMBL OSS3027A [ ATGCTGCTGAAATTGTTGATATTCTGGAGTATTTGCATAGTTTAGGCCTAATTCATCGGGATGTTAAGCCAGAAAATTTACTGCTTACTTCTGATGGGCACATCAAGATTGCCGATTTTGGTAGTGTGAAGCCTACAAAGGACACCCCGATCAAAGTCCTTCCAAATTCCACTAACGAGAGGGCCTGTACATTTGTTGGGACAGCTGCATATGTACCACCTGAGGTCCTGAACTCTGCCCCACCAACCTTTGGAAATGACTTATGGGCATTGGGGTGTACTCTATATCAATTGCTTTCTGGCTC ]
[-] EMBL CB629661 [ GTCCTGTTGGGAATGATGGTGCCTCATCATCTTCTGAAGTACGCTCCCATATATCTAGATTAGCTTCCATCGACTCCTTCGACTCTAGATGGCAGGACTTCCTGGAGCCTGGCGAATCTGTCGTTCTAATATCAAAACTGAAGAAGATAACCAAGCTAACGACCAAGAAGGTTCAGTTGATCCTCACCGACAAACCACAGCTGATCTGTGTAGATCCTGGAAAAATGGTGACTAAAGGGAACATCATGTGGTCTGATGA CCCAAGTGAACTCAATGTGCAAGTATCAAACTCTTCGCATTTCAGGATATGCACGCCAAAGAAGGTGTCATCGTTTGAGGATGCAAAACAGCGCGCCTGGCA ATGGAAGAAGGCGATCGAAGACCTACAACGCTGCCAGAAGAACTGCCCATGACCAACTCAAGACGTCAAAATGGTGATATTAAGCATTGTGTATACACCATAGCCATCCTTTTCGCCTGGAGGAACATGGGGGAGACTATTGTTCCTGGTCTCCTGCATCTGTGCCCGATTGCAACGAAGTCTCACCAGTTGGCACATCGATGGATGTTCCTACATTTTTTTGTTTTCTTTTCCGGCCCTGCTAAATTTTCTTAT]
[+] EMBL BI808338 [ CTGTGTAGATCCTGGAAAAATGGTGACTAAAGGGAACATCATGTGGTCTGATGACCCCAAGTGAACTCAATGTGCAAGTATC AACTCTTCGCATTTCAGGATATGCACGCCCAAGAAGGTGTCATCGTTTGAGGATGCCAAACAGCGCGCCTGGCACATGGAAGAAGGCGATCGAAGACCTAC ACGCTGCCAGAAGAACTGACCATGACCAACTCAAGACGTC AAATGGTGATATTAAGCATTGTGTATACACCATAGCCATCCTTTTCGCCTGGAGGAACATGGGGGAGACTATTGTTCCTGGTCTCCTGCATCTGTGCCCGATTGCAACGAAGTCTC ACAGTTGGCACATCGATGGATGTTCCTACATTTTTTTGTTTTCTTTTCCGGCCCTGCTAAATTCTCTTA ]
[+] EMBL C22679 [ AACTCTTCGCATTTCAGGATATGCACGCCAAAGAAGGTGTCATCGTTTGNTGATGCAAAACAGCGCGCCTGGCA ATGGAAGAAGGCGATCGAAGACCTACAACGCTGCCAGAAGAACTGACCATGACCAACTCAAGACGTCAAAATGGTGATATTAAGCATTGTGTATACACCATAGCCATCCTTTTCGCCTGGAGGAACATGGGGGAGACTATTGTTCCTGGTCTCCTGCATCTGTGCCCGATTGCAACGAAGTCTCAACAGTTGGCACATCGATGGATGTTCCTACATTTTTTTGTTTTCTTTTCCGGCCCTGCTAAATTCTCTTA ]
[+] EMBL AU057559 [ CCTTTTCGCCTGGAGGAACATGGGGGAGACTATTGTTCCTGGTCTCCTGCATCTGTGCCCGATTGCAACGAA TCTCAACAGTTGGCACATCGATGGATGTTCCTACATTTTTTTGTTTTCTTTTCCGGCCCTGCTAAATTCTCTTA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||