cluster # 11879

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Oryza sativa
cluster # 11879 cluster # 11879 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11879#0 length = 3155 sequences # 6

consensus_11879#1 length = 789 sequences # 2
consensus_11879#2 length = 240 sequences # 1

consensusID : consensus_11879#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 3155
fasta sequence

                              [TCTTCCACCAAGCCACCCTGGTCCCACCCGTCCGCGGCTCGAGCCCCCCCTCAAAATCCCCCAACCCCGTGCGTGCCCGTGCCCGTGCCCCGCCCGCCCGCCCGCGTGCCGGATTTCGCCGTAAATCGGCAGCGTTTCCCCGTGCGGGGGGGCAGCGGCGGCGGTTGGATGGCGCTGTCCGCGTCGGCGGCGGCGTCGGCCGGGCGGGGGGCGCGGGCGGAGAAGGTGGGGAGGATCTTCGAGCGGTTCGATGCCAACGGGGACGGGGGGCTGGACCGCGACGAGATGGCGGCGCTCGTCGTCGCCGTCAACCCGCGGGTGAAGTTCAGCGAGGACCAGATCTCCGCCATCCTCGACGAGGTGTTCCGCACCTACGCCGAGTTCATACTCCCCGGGGGGCGGGGCCTCTCCCTGCCGGGGCTGCTACGCACCTACGACGACGGCGCCGGGGACGTCGACCGCGACTTCCTCGCGCTGTCCCTTCCCCCGCTCGAGTCCGGGGAGTCCTCCCCGGAGATCGCCGCGGGGGACCCGGCCGCCGCCTCGTCCCCGCCCTCCGGCGCCGCCGCCGCCGCGTCGCTCCTGGACGACCACATCAAGCCGCTTGGAGCAGCCGGTGGGGCGCCCTCGTCCAGCTCACGCGCCGCGGCGGCCGCGCCGGCGTGGGCGACGTCGCCCAGCCACGGGATTGCGTTCGACTCCTCCTGGGCGCTCCTCGACGACCTGGAGATACTAGTGAAGCGCCTCCGCTCCAAGCAGCTGCGGAGAACATCCTCCATCGACACGATCAACGGCAGCGGCGGCGCGGGGAACAACAATTTCGACTCCTTCTCCGAGGCCGGGTGGTCAAGGGAGATCTCCGGCCAAGCGGATTCGGCTTCGACCGCCGCGCCATGGGACGAGACGAGCCGCGACTACCTCACCTTCGTCAAGGAGCTCGCCGTGCTCCGCACGCGCGCGGACGCCTCCCGCTCACGGGAGGAGGCCTTCGACAATCACATGGTCATCGGCAGGGCGCTCTCCGAGCACCGCCTCTTCCGGGACGCGCTTAGCAGCTTCCGCCGCGCCTGCGAGCTGCAGCCCACTGACGTGCGCCCCCACTTCCGCGCGGGGAACTGCCTCTACGCCCTTGGCCGCCACTCGGAGGCCAAGGAAGAGTATCTCCTGGCGCTTGAGGCAGCGGAGGCAGGTGGCTCCCAGTCTGCGGACATCCTCCCACAGATCCATGTCAACCTTGGCATTGCCATGGAGGCTGAGGGGATGGTGCTCGGTGCCTGTGAGCACTACCGAGAGGCTGCCATACTGTGTCCTTCTCATGCCCGGGCGCTGAAGCTCCTCGGTAGCGCGCTCTTTGGTGTTGGTGAGTACCGTGCAGCCGAGAAGGCACTAGAGGAGGCCATCTTCTTGAAGCCAGACTATGCTGATGCACACTGTGATCTTGGGTCAGCCCTGCATGCGATCGGGGATGATGACCGTGCGGTTCAGGAGTTTCAGAAGGCAATTGATCTCAAACCTGGGCATGTTGATGCCTTGTACAATCTTGGTGGATTGAATATGGATGCAGGGCGCTTTGTGCGGGCTGCGGAGATGTATACTCGTGTGTTGAGCATCCGACCGAACCATTGGCGTGCTCAGCTAAACAAGGCTGTTGCTTTGCTTGGCCAGGGGGAGTCTGAGGAGGCCAAGAAGGCACTCAAGGAGGCATTTAAGATGACACAAAGGGTAGAGGTGTATGATGCCATATCTCATCTGAAGACACTGCAGAAGAAGAAACCAAAGCCTCCCAAAGGAAAAGATGATAGTCAAGGAGAGGAGGCCTTCGTTGTAGTGGAGCCATCCAAGTTCAAGAGGGTTGGAAGAAAGACTACCTTGCGGCAGGACCTTGCTAATGCCCTTGATATAAGAGCCTTTGAGAAAACGACAAAGCTTGGCCGCTGTGACGCGGAGCTTCTGAGGAAAGAGATGAACGAGACTGATGTCCCCATATCCTACTCAGGCGCTGGCAACCCAGAGAAGTCAATACGGAAAGCAGCTCTCGAGGTTATTCTCCACAGGCTCCTATCTTTCCTCAAGCCAGATACCTTTCAGGGTTCTGTGAAGGCGATTAACGAAAGAATCCTCTCCGTCCTTGATGCCTCTGGTTCTGGCCGTGTTGACCTTGGGATGTTCTTTGCTATTATCGCCCCAATTTGTTCTGGTCCTGTGGATAAGCGCAAGCGGGTTGTCTTTGATGCACTTCTTTGGCGTCCGGCAAGTGAAGGAAGCAGGGGTCAGATTAGGAGGAGCGATGCACTGTCCTACATCAAACTTCTTCGTGCTGTTTATATACCCACCCATGGGGCTAGCGACATGCTTGAAATGCATGGGGAGTCTGACCCCACTATGGTATCATACACGGAGTTCCTCGAAATGTTCAATGATCCCGATTGGGGATTTGGAATCCTAAGCACATTGGTGAAGCTTGAGGACAGCGATCACATTCGTCACGGCCGCCACACCTGCTCAATTTGCCGATATCCTATCATTGGTTCCCGATTCAAGGAGACAAAGCACTCCTTTAGCTTGTGCAATCGATGCTACAGTGAAGGGAAGGTTCCATCAGCATTCAAGTTGGATGAGTACAGGTTCAAAGAATATGGTAACGAGTCTGAGGCTCTTATCGATAAGTGCATGTGCTTTAATTTACATTCTAAGAAGCTCGAAGCTGATACTTGATCATTCGATCTTTGGTGTCGATTGCTCGAGCATGAATCTGTGTATCCCCTTTCTAGGTGCAAAGATCTCTAGATAGTCTCCTGCCCTCTTGTAAACTAAGGTGCTGTTCTGTTCGGAGTTTTCTGAATGTGTTCCAACTACTTGAAAATCCTAATCAATTAGCTATTGTTCGTCCAAGTGTATGGGAGTGAGAACATGTGAATTCCAAACACACTGTTGTTACAATCCCCAATGCTCTTGTTTAATAGAGATCCTTGCTGATATCCATGAGGTTTTATTTGAACCAAACAATTTTGGGCTATTTTTTTCTTTAATCACACTTGTATGATTTATAGCTTGGGTTGCAGGAATAGATGGTAAAATCACTATGTACATTCAGTTTTAAACTTCTTTGTAAGTTGGTCTAACAAAGATTATTTTCTAAGGCAGTCATCATGCTG]

[+] EMBL AK121215             [TCTTCCACCAAGCCACCCTGGTCCCACCCGTCCGCGGCTCGAGCCCCCCCTCAAAATCCCCCAACCCCGTGCGTGCCCGTGCCCGTGCCCCGCCCGCCCGCCCGCGTGCCGGATTTCGCCGTAAATCGGCAGCGTTTCCCCGTGCGGGGGGGCAGCGGCGGCGGTTGGATGGCGCTGTCCGCGTCGGCGGCGGCGTCGGCCGGGCGGGGGGCGCGGGCGGAGAAGGTGGGGAGGATCTTCGAGCGGTTCGATGCCAACGGGGACGGGGGGCTGGACCGCGACGAGATGGCGGCGCTCGTCGTCGCCGTCAACCCGCGGGTGAAGTTCAGCGAGGACCAGATCTCCGCCATCCTCGACGAGGTGTTCCGCACCTACGCCGAGTTCATACTCCCCGGGGGGCGGGGCCTCTCCCTGCCGGGGCTGCTACGCACCTACGACGACGGCGCCGGGGACGTCGACCGCGACTTCCTCGCGCTGTCCCTTCCCCCGCTCGAGTCCGGGGAGTCCTCCCCGGAGATCGCCGCGGGGGACCCGGCCGCCGCCTCGTCCCCGCCCTCCGGCGCCGCCGCCGCCGCGTCGCTCCTGGACGACCACATCAAGCCGCTTGGAGCAGCCGGTGGGGCGCCCTCGTCCAGCTCACGCGCCGCGGCGGCCGCGCCGGCGTGGGCGACGTCGCCCAGCCACGGGATTGCGTTCGACTCCTCCTGGGCGCTCCTCGACGACCTGGAGATACTAGTGAAGCGCCTCCGCTCCAAGCAGCTGCGGAGAACATCCTCCATCGACACGATCAACGGCAGCGGCGGCGCGGGGAACAACAATTTCGACTCCTTCTCCGAGGCCGGGTGGTCAAGGGAGATCTCCGGCCAAGCGGATTCGGCTTCGACCGCCGCGCCATGGGACGAGACGAGCCGCGACTACCTCACCTTCGTCAAGGAGCTCGCCGTGCTCCGCACGCGCGCGGACGCCTCCCGCTCACGGGAGGAGGCCTTCGACAATCACATGGTCATCGGCAGGGCGCTCTCCGAGCACCGCCTCTTCCGGGACGCGCTTAGCAGCTTCCGCCGCGCCTGCGAGCTGCAGCCCACTGACGTGCGCCCCCACTTCCGCGCGGGGAACTGCCTCTACGCCCTTGGCCGCCACTCGGAGGCCAAGGAAGAGTATCTCCTGGCGCTTGAGGCAGCGGAGGCAGGTGGCTCCCAGTCTGCGGACATCCTCCCACAGATCCATGTCAACCTTGGCATTGCCATGGAGGCTGAGGGGATGGTGCTCGGTGCCTGTGAGCACTACCGAGAGGCTGCCATACTGTGTCCTTCTCATGCCCGGGCGCTGAAGCTCCTCGGTAGCGCGCTCTTTGGTGTTGGTGAGTACCGTGCAGCCGAGAAGGCACTAGAGGAGGCCATCTTCTTGAAGCCAGACTATGCTGATGCACACTGTGATCTTGGGTCAGCCCTGCATGCGATCGGGGATGATGACCGTGCGGTTCAGGAGTTTCAGAAGGCAATTGATCTCAAACCTGGGCATGTTGATGCCTTGTACAATCTTGGTGGATTGAATATGGATGCAGGGCGCTTTGTGCGGGCTGCGGAGATGTATACTCGTGTGTTGAGCATCCGACCGAACCATTGGCGTGCTCAGCTAAACAAGGCTGTTGCTTTGCTTGGCCAGGGGGAGTCTGAGGAGGCCAAGAAGGCACTCAAGGAGGCATTTAAGATGACACAAAGGGTAGAGGTGTATGATGCCATATCTCATCTGAAGACACTGCAGAAGAAGAAACCAAAGCCTCCCAAAGGAAAAGATGATAGTCAAGGAGAGGAGGCCTTCGTTGTAGTGGAGCCATCCAAGTTCAAGAGGGTTGGAAGAAAGACTACCTTGCGGCAGGACCTTGCTAATGCCCTTGATATAAGAGCCTTTGAGAAAACGACAAAGCTTGGCCGCTGTGACGCGGAGCTTCTGAGGAAAGAGATGAACGAGACTGATGTCCCCATATCCTACTCAGGCGCTGGCAACCCAGAGAAGTCAATACGGAAAGCAGCTCTCGAGGTTATTCTCCACAGGCTCCTATCTTTCCTCAAGCCAGATACCTTTCAGGGTTCTGTGAAGGCGATTAACGAAAGAATCCTCTCCGTCCTTGATGCCTCTGGTTCTGGCCGTGTTGACCTTGGGATGTTCTTTGCTATTATCGCCCCAATTTGTTCTGGTCCTGTGGATAAGCGCAAGCGGGTTGTCTTTGATGCACTTCTTTGGCGTCCGGCAAGTGAAGGAAGCAGGGGTCAGATTAGGAGGAGCGATGCACTGTCCTACATCAAACTTCTTCGTGCTGTTTATATACCCACCCATGGGGCTAGCGACATGCTTGAAATGCATGGGGAGTCTGACCACAC  TGGTATCATACACGGAGTTCCTCGAAATGTTCAATGATCCCGATTGGGGATTTGGAATCCTAAGCACATTGGTGAAGCTTGAGGACAGCGATCACATTCGTCACGGCCGCCACACCTGCTCAATTTGCCGATATCCTATCATTGGTTCCCGATTCAAGGAGACAAAGCACTCCTTTAGCTTGTGCAATCGATGCTACAGTGAAGGGAAGGTTCCATCAGCATTCAAGTTGGATGAGTACAGGTTCAAAGAATATGGTAACGAGTCTGAGGCTCTTATCGATAAGTGCATGTGCTTTAATTTACATTCTAAGAAGCTCGAAGCTGATACTTGATCATTCGATCTTTGGTGTCGATTGCTCGAGCATGAATCTGTGTATCCCCTTTCTAGGTGCAAAGATCTCTAGATAGTCTCCTGCCCTCTTGTAAACTAAGGTGCTGTTCTGTTCGGAGTTTTCTGAATGTGTTCCAACTACTTGAAAATCCTAATCAATTAGCTATTGTTCGTCCAAGTGTATGGGAGTGAGAACATGTGAATTCCAAACACACTGTTGTTACAATCCCCAATGCTCTTGTTTAATAGAGATCCTTGCTGATATCCATGAGGTTTTATTTGAACCAAACAATTTTGGGCTATTTTTTTCTTTAATCACACTTGTATGATTTATAGCTTGGGTTGCAGGAATAGATGGTAAAATCACTATGTACATTCAGTTTTAAACTTCTTTGTAAGTTGGTCTAACAAAGATTATTTTCTAAGGCAGTCATCATGCTG]
[+] EMBL CB621292             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTCCCAGTCTGCGGACATCCTCCCACAGATCCATGTCAACCTTGGCATTGCCATGGAGGCTGAGGGGATGGTGCTCGGTGCCTGTGAGCACTACCGAGAGGCTGCCATACTGTGTCCTTCTCATGCCCGGGCGCTGAAGCTCCTCGGTAGCGCGCTCTTTGGTGTTGGTGAGTACCGTGCAGCCGAGAAGGCACTAGAGGAGGCCATCTTCTTGAAGCCAGACTATGCTGATGCACACTGTGATCTTGGGTCAGCCCTGCATGCGATCGGGGATGATGACCGTGCGGTTCAGGAGTTTCAGAAGGCAATTGATCTCAAACCTGGGCATGTTGATGCCTTGTACAATCTTGGTGGATTGAATATGGATGCAGGGCGCTTTGTGCGGGCTGCGGAGATGTATACTCGTGTGTTGAGCATCCGACCGAACCATTGGCGTGCTCAGCTAAACAAGGCTGTTGCTTTGCTTGGCCAGGGGGAGTCTGAGGAGGCCAAGAAGGCACTCAAGGAGGCATTTAAGATGACACAAAGGGTAGAGGTGTATGATGCCATATCTCATCTGAAGACACTGCAGAAGAAGAAACCAAAGCCTCCCAAAGGAAAAGATGATAGTCAAGGAGAGGAGGCCTTCGTTGTAGTGGAGCCATCCAAGTTCAAGAGGGTTGGAAGAAAGACTACCTTGCGGCAGGACCTTGCTAATGCCCTTGATATAAGAGCCTTTGAGAGAACGACAAAGCTTGGCCGCTGCGACGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB675981             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCATTCAAGATGACACAAAGGGTAGAGGTGTATGATGCCATATCTCATCTGAAGACACTGCAGAAGAAGAAACCAAAGCCTCCCAAAGGAAAAGATGATAGTCAAGGAGAGGAGGCCTTCGTTGTAGTGGAGCCATCCAAGTTCAAGAGGGTTGGAAGAAAGACTACCTTGCGGCAGGACCTTGCTAATGCCCTTGATATAAGAGCCTTTGAGAAAACGACAAAGCTTGGCCGCTGTGACGCGGAGCTTCTGAGGAAAGAGATGAACGAGACTGATGTCCCCATATCCTACTCAGGCGCTGGCAACCCAGAGAAGTCAATACGGAAAGCAGCTCTCGAGGTTATTCTCCACAGGCTCCTATCTTTCCTCAAGCCAGATACCTTTCAGGGTTCTGTGAAGGCGATTAACGAAAGAATCCTCTCCGTCCTTGATGCCTCTGGTTCTGGCCGTGTTGACCTTGGGATGTTCTTTGCTATTATCGCCCCAATTTGTTCTGGTCCTGTGGATAAGCGCAAGCGGGTTGTCTTTGATGCACTTCTTTGGCGTCCGGCAAGTGAAGGAAGCAGGGGTCAGATTAGGAGGAGCGATGCACTGTCCTACATCAAACTTCTTCGTGCTGTTTATATACCCACCCATGGGGCTAGCGACATGCTTGAAATGCATGGGGAGTCTGACCCCACTATGGTATCATACACGGAGTTCCTCGAAATGTTCAATGATCCCGATTGGGGATTTGGAATCCTAAGCACATTGGTGAAGCTTGAGGACAGCGATCACATTCGTCACGGCCGCCACACCTGCTC ATTTGCCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB679359             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GAAAGCAGCTCTCGAGGTTATTCTCCACAGGCTCCTATCTTTCCTCAAGCCAGATACCTTTCAGGGTTCTGTGAAGGCGATTAACGAAAGAATCCTCTCCGTCCTTGATGCCTCTGGTTCTGGCCGTGTTGACCTTGGGATGTTCTTTGCTATTATCGCCCCAATTTGTTCTGGTCCTGTGGATAAGCGCAAGCGGGTTGTCTTTGATGCACTTCTTTGGCGTCCGGCAAGTGAAGGAAGCAGGGGTCAGATTAGGAGGAGCGATGCACTGTCCTACATCAAACTTCTTCGTGCTGTTTATATACCCACCCATGGGGCTAGCGACATGCTTGAAATGCATGGGGAGTCTGACCCCACTATGGTATCATACACGGAGTTCCTCGAAATGTTCAATGATCCCGATTGGGGATTTGGAATCCTAAGCACATTGGTGAAGCTTGAGGACAGCGATCACATTCGTCACGGCCGCCACACCTGCTCAATTTGCCGATATCCTATCATTGGTTCCCGATTCAAGGAGACAAAGCACTCCTTTAGCTTGTGCAATCGATGCTACAGTGAAGGGAAGGTTCCATCAGCATTCAAGTTGGATGAGTACAGGTTCAAAGAATATGGTAACGAGTCTGAGGCTCTTATCGATAAGTGCATGTGCTTTAATTTACATTCTAAGAAGCTCGAAGCTGATACTTGATCATTCGATCTTTGGTGTCGATTGCTCGAGCATGAATCTGTGTATCCCCTTTCTAGGTGCAAAGATCTCTAGATAGTCT                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB679360             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GATACCTTTCAGGGTTCTGTGAAGGCGATTAACGAAAGAATCCTCTCCGTCCTTGATGCCTCTGGTTCTGGCCGTGTTGACCTTGGGATGTTCTTTGCTATTATCGCCCCAATTTGTTCTGGTCCTGTGGATAAGCGCAAGCGGGTTGTCTTTGATGCACTTCTTTGGCGTCCGGCAAGTGAAGGAAGCAGGGGTCAGATTAGGAGGAGCGATGCACTGTCCTACATCAAACTTCTTCGTGCTGTTTATATACCCACCCATGGGGCTAGCGACATGCTTGAAATGCATGGGGAGTCTGACCCCACTATGGTATCATACACGGAGTTCCTCGAAATGTTCAATGATCCCGATTGGGGATTTGGAATCCTAAGCACATTGGTGAAGCTTGAGGACAGCGATCACATTCGTCACGGCCGCCACACCTGCTCAATTTGCCGATATCCTATCATTGGTTCCCGATTCAAGGAGACAAAGCACTCCTTTAGCTTGTGCAATCGATGCTACAGTGAAGGGAAGGTTCCATCAGCATTCAAGTTGGATGAGTACAGGTTCAAAGAATATGGTAACGAGTCTGAGGCTCTTATCGATAAGTGCATGTGCTTTAATTTACATTCTAAGAAGCTCGAAGCTGATACTTGATCATTCGATCTTTGGTGTCGATTGCTCGAGCATGAATCTGTGTATCCCCTTTCTAGGTGCAAAGATCTCTAGATAGTCTCCTGCCCTCTTGTAAACTAAGGTGCTGTTCTGTTCGGAGTTTTCTGAATGAGGGCCAACTACTTGAAAATCCTAATCAATTAGCT                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB675982             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGGTTCCATCAGCATTCAAGTTGGATGAGTACAGGTTCAAAGAATATGGTAACGAGTCTGAGGCTCTTATCGATAAGTGCATGTGCTTTAATTTACATTCTAAGAAGCTCGAAGCTGATACTTGATCATTCGATCTTTGGTGTCGATTGCTCGAGCATGAATCTGTGTATCCCCTTTCTAGGTGCAAAGATCTCTAGATAGTCTCCTGCCCTCTTGTAAACTAAGGTGCTGTTCTGTTCGGAGTTTTCTGAATGTGTTCCAACTACTTGAAAATCCTAATCAATTAGCTATTGTTCGTCCAAGTGTATGGGAGTGAGAACATGTGAATTCCAAACACACTGTTGTTACAATCCCCAATGCTCTTGTTTAATAGAGATCCTTGCTGATATCCATGAGGTTTTATTTGAACCAAACAATTTTGGGCTATTTTTTTCTTTAATCACACTTGTATGATTTATAGCTTGGGTTGCAGGAATAGATGGTAAAATCACTATGTACATTCAGTTTTAAACTTCTTTGTAAGTTGGTCTAACAAAGATTATTTTCTAAGGCAGTCA        ]




>consensus_11879#0
TCTTCCACCAAGCCACCCTGGTCCCACCCGTCCGCGGCTCGAGCCCCCCCTCAAAATCCC
CCAACCCCGTGCGTGCCCGTGCCCGTGCCCCGCCCGCCCGCCCGCGTGCCGGATTTCGCC
GTAAATCGGCAGCGTTTCCCCGTGCGGGGGGGCAGCGGCGGCGGTTGGATGGCGCTGTCC
GCGTCGGCGGCGGCGTCGGCCGGGCGGGGGGCGCGGGCGGAGAAGGTGGGGAGGATCTTC
GAGCGGTTCGATGCCAACGGGGACGGGGGGCTGGACCGCGACGAGATGGCGGCGCTCGTC
GTCGCCGTCAACCCGCGGGTGAAGTTCAGCGAGGACCAGATCTCCGCCATCCTCGACGAG
GTGTTCCGCACCTACGCCGAGTTCATACTCCCCGGGGGGCGGGGCCTCTCCCTGCCGGGG
CTGCTACGCACCTACGACGACGGCGCCGGGGACGTCGACCGCGACTTCCTCGCGCTGTCC
CTTCCCCCGCTCGAGTCCGGGGAGTCCTCCCCGGAGATCGCCGCGGGGGACCCGGCCGCC
GCCTCGTCCCCGCCCTCCGGCGCCGCCGCCGCCGCGTCGCTCCTGGACGACCACATCAAG
CCGCTTGGAGCAGCCGGTGGGGCGCCCTCGTCCAGCTCACGCGCCGCGGCGGCCGCGCCG
GCGTGGGCGACGTCGCCCAGCCACGGGATTGCGTTCGACTCCTCCTGGGCGCTCCTCGAC
GACCTGGAGATACTAGTGAAGCGCCTCCGCTCCAAGCAGCTGCGGAGAACATCCTCCATC
GACACGATCAACGGCAGCGGCGGCGCGGGGAACAACAATTTCGACTCCTTCTCCGAGGCC
GGGTGGTCAAGGGAGATCTCCGGCCAAGCGGATTCGGCTTCGACCGCCGCGCCATGGGAC
GAGACGAGCCGCGACTACCTCACCTTCGTCAAGGAGCTCGCCGTGCTCCGCACGCGCGCG
GACGCCTCCCGCTCACGGGAGGAGGCCTTCGACAATCACATGGTCATCGGCAGGGCGCTC
TCCGAGCACCGCCTCTTCCGGGACGCGCTTAGCAGCTTCCGCCGCGCCTGCGAGCTGCAG
CCCACTGACGTGCGCCCCCACTTCCGCGCGGGGAACTGCCTCTACGCCCTTGGCCGCCAC
TCGGAGGCCAAGGAAGAGTATCTCCTGGCGCTTGAGGCAGCGGAGGCAGGTGGCTCCCAG
TCTGCGGACATCCTCCCACAGATCCATGTCAACCTTGGCATTGCCATGGAGGCTGAGGGG
ATGGTGCTCGGTGCCTGTGAGCACTACCGAGAGGCTGCCATACTGTGTCCTTCTCATGCC
CGGGCGCTGAAGCTCCTCGGTAGCGCGCTCTTTGGTGTTGGTGAGTACCGTGCAGCCGAG
AAGGCACTAGAGGAGGCCATCTTCTTGAAGCCAGACTATGCTGATGCACACTGTGATCTT
GGGTCAGCCCTGCATGCGATCGGGGATGATGACCGTGCGGTTCAGGAGTTTCAGAAGGCA
ATTGATCTCAAACCTGGGCATGTTGATGCCTTGTACAATCTTGGTGGATTGAATATGGAT
GCAGGGCGCTTTGTGCGGGCTGCGGAGATGTATACTCGTGTGTTGAGCATCCGACCGAAC
CATTGGCGTGCTCAGCTAAACAAGGCTGTTGCTTTGCTTGGCCAGGGGGAGTCTGAGGAG
GCCAAGAAGGCACTCAAGGAGGCATTTAAGATGACACAAAGGGTAGAGGTGTATGATGCC
ATATCTCATCTGAAGACACTGCAGAAGAAGAAACCAAAGCCTCCCAAAGGAAAAGATGAT
AGTCAAGGAGAGGAGGCCTTCGTTGTAGTGGAGCCATCCAAGTTCAAGAGGGTTGGAAGA
AAGACTACCTTGCGGCAGGACCTTGCTAATGCCCTTGATATAAGAGCCTTTGAGAAAACG
ACAAAGCTTGGCCGCTGTGACGCGGAGCTTCTGAGGAAAGAGATGAACGAGACTGATGTC
CCCATATCCTACTCAGGCGCTGGCAACCCAGAGAAGTCAATACGGAAAGCAGCTCTCGAG
GTTATTCTCCACAGGCTCCTATCTTTCCTCAAGCCAGATACCTTTCAGGGTTCTGTGAAG
GCGATTAACGAAAGAATCCTCTCCGTCCTTGATGCCTCTGGTTCTGGCCGTGTTGACCTT
GGGATGTTCTTTGCTATTATCGCCCCAATTTGTTCTGGTCCTGTGGATAAGCGCAAGCGG
GTTGTCTTTGATGCACTTCTTTGGCGTCCGGCAAGTGAAGGAAGCAGGGGTCAGATTAGG
AGGAGCGATGCACTGTCCTACATCAAACTTCTTCGTGCTGTTTATATACCCACCCATGGG
GCTAGCGACATGCTTGAAATGCATGGGGAGTCTGACCCCACTATGGTATCATACACGGAG
TTCCTCGAAATGTTCAATGATCCCGATTGGGGATTTGGAATCCTAAGCACATTGGTGAAG
CTTGAGGACAGCGATCACATTCGTCACGGCCGCCACACCTGCTCAATTTGCCGATATCCT
ATCATTGGTTCCCGATTCAAGGAGACAAAGCACTCCTTTAGCTTGTGCAATCGATGCTAC
AGTGAAGGGAAGGTTCCATCAGCATTCAAGTTGGATGAGTACAGGTTCAAAGAATATGGT
AACGAGTCTGAGGCTCTTATCGATAAGTGCATGTGCTTTAATTTACATTCTAAGAAGCTC
GAAGCTGATACTTGATCATTCGATCTTTGGTGTCGATTGCTCGAGCATGAATCTGTGTAT
CCCCTTTCTAGGTGCAAAGATCTCTAGATAGTCTCCTGCCCTCTTGTAAACTAAGGTGCT
GTTCTGTTCGGAGTTTTCTGAATGTGTTCCAACTACTTGAAAATCCTAATCAATTAGCTA
TTGTTCGTCCAAGTGTATGGGAGTGAGAACATGTGAATTCCAAACACACTGTTGTTACAA
TCCCCAATGCTCTTGTTTAATAGAGATCCTTGCTGATATCCATGAGGTTTTATTTGAACC
AAACAATTTTGGGCTATTTTTTTCTTTAATCACACTTGTATGATTTATAGCTTGGGTTGC
AGGAATAGATGGTAAAATCACTATGTACATTCAGTTTTAAACTTCTTTGTAAGTTGGTCT
AACAAAGATTATTTTCTAAGGCAGTCATCATGCTG

consensusID : consensus_11879#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 789
fasta sequence

                              [AATCCTCTCCGTCCTTGATGCCTCTGGTTCTGGCCGTGTTGACCTTGGGATGTTCTTTGCTATTATCGCCCCAATTTGTTCTGGTCCTGTGGATAAGCGCAAGCGGGTTGTCTTTGATGCACTTCTTTGGCGTCCGGCAAGTGAAGGAAGCAGGGGTCAGATTAGGAGGAGCGATGCACTGTCCTACATCAAACTTCTTCGTGCTGTTTATATACCCACCCATGGGGCTAGCGACATGCTTGAAAT-GCATGGGGAGTCTGACCCCACTATGGTATCATACACGGAGTTCCTCGAAATGTTCAATGATCCCGATTGGGGATTTGGAATCCTAAGCACATTGGTGAAGCTTGAGGACAGCGATCACATTCGTCACGGCCGCCACACCTGCTCAATTTGCCGATATCCTATCATTGGTTCCCGATTCAAGGAGACAAAGCACTCCTTTAGCTTGTGCAATCGATGCTA-CA-GTGAAGGGAAGGTTCCA-TCAGCA-TTCAAGTTGGATGAGTACAGGTTCAAAGAATATGGTAACGAGTCTGAGGCTCTTATCGATAAGTGCATGTGCTTTAATTTACATTCTAAGAAGCTCGAAGCTGATA-CTTGAT-CATTCGATCTTTGGTGTCGATTGCTCGAGCATGAATCTGTGTATCCCCTTTGTAGGTGCAAAGATCTCTAGATAGTCTCCTGCCCTCTTGTAAACTAAGGTGCTGTTCTGTTCGGAGTTTTCTGAATGTGTTCCAACTACTTGAAAATCCTAATCAATTAGCTATTGTTCGTCCAAAAAAAAAAAAG]

[-] EMBL CB621293             [AATCCTCTCCGTCCTTGATGCCTCTGGTTCTGGCCGTGTTGACCTTGGGATGTTCTTTGCTATTATCGCCCCAATTTGTTCTGGTCCTGTGGATAAGCGCAAGCGGGTTGTCTTTGATGCACTTCTTTGGCGTCCGGCAAGTGAAGGAAGCAGGGGTCAGATTAGGAGGAGCGATGCACTGTCCTACATCAAACTTCTTCGTGCTGTTTATATACCCACCCATGGGGCTAGCGACATGCTTGAAAT GCATGGGGAGTCTGACCCCACTATGGTATCATACACGGAGTTCCTCGAAATGTTCAATGATCCCGATTGGGGATTTGGAATCCTAAGCACATTGGTGAAGCTTGAGGACAGCGATCACATTCGTCACGGCCGCCACACCTGCTCAATTTGCCGATATCCTATCATTGGTTCCCGATTCAAGGAGACAAAGCACTCCTTTAGCTTGTGCAATCGATGCTA CA GTGAAGGGAAGGTTCCA TCAGCA TTCAAGTTGGATGAGTACAGGTTCAAAGAATATGGTAACGAGTCTGAGGCTCTTATCGATAAGTGCATGTGCTTTAATTTACATTCTAAGAAGCTCGAAGCTGATA CTTGAT CATTCGATCTTTGGTGTCGATTGCTCGAGCATGAATCTGTGTATCCCCTTTGTAGGTGCAAAGATCTCTAGATAGTCTCCTGCCCTCTTGTAAACTAAGGTGCTGTTCTGTTCGGAGTTTTCTGAATGTGTTCCAACTACTTGAAAATCCTAATCAATTAGCTATTGTTCGTCCAAAAAAAAAAAAG]
[+] EMBL BM038789             [                                                                                                                                                                                                                                               TTGAAATCGCATGGGGAGTCTGACCCCACTATGGTATCATAC CGGAGTTCCTCGAAATGTTC ATGATCCCGATTGGGGATTTGGAATCCTAAGCACATTGGTGAAGCTTGAGGACAGCGATCACATTCGTCAC GCCGCCACACCTGCTCAATTTGCCGATATCCTATCATTGGTTCCCGATTCAAGGAGAC AAGCACTCCTTTAGCTTGT CCATCGATGCTACCACGTGAAGGGAAGGTTCCACTCAGCACTTCCAGTTGGATGAGTACAGGTTCCAAGAATATGGTAACGAGTCTGAGGCTCTTATCGATAAGTGCATGTGCTTTAATTTACATTCTAAGAAGCTCGAAGCTGATACCTTGATCCATTCGATCTTTGGTGTCGATTGCTCGAGCATGAATCTGTGTATCCCCTTTGTAGGT CCAAGATCTCTAGATAGTCTCCTGCCCTCTTGTAAACTAAGGTGCTGTTCTGTTCGGAGTTaaaaaaa                                                             ]




>consensus_11879#1
AATCCTCTCCGTCCTTGATGCCTCTGGTTCTGGCCGTGTTGACCTTGGGATGTTCTTTGC
TATTATCGCCCCAATTTGTTCTGGTCCTGTGGATAAGCGCAAGCGGGTTGTCTTTGATGC
ACTTCTTTGGCGTCCGGCAAGTGAAGGAAGCAGGGGTCAGATTAGGAGGAGCGATGCACT
GTCCTACATCAAACTTCTTCGTGCTGTTTATATACCCACCCATGGGGCTAGCGACATGCT
TGAAATGCATGGGGAGTCTGACCCCACTATGGTATCATACACGGAGTTCCTCGAAATGTT
CAATGATCCCGATTGGGGATTTGGAATCCTAAGCACATTGGTGAAGCTTGAGGACAGCGA
TCACATTCGTCACGGCCGCCACACCTGCTCAATTTGCCGATATCCTATCATTGGTTCCCG
ATTCAAGGAGACAAAGCACTCCTTTAGCTTGTGCAATCGATGCTACAGTGAAGGGAAGGT
TCCATCAGCATTCAAGTTGGATGAGTACAGGTTCAAAGAATATGGTAACGAGTCTGAGGC
TCTTATCGATAAGTGCATGTGCTTTAATTTACATTCTAAGAAGCTCGAAGCTGATACTTG
ATCATTCGATCTTTGGTGTCGATTGCTCGAGCATGAATCTGTGTATCCCCTTTGTAGGTG
CAAAGATCTCTAGATAGTCTCCTGCCCTCTTGTAAACTAAGGTGCTGTTCTGTTCGGAGT
TTTCTGAATGTGTTCCAACTACTTGAAAATCCTAATCAATTAGCTATTGTTCGTCCAAAA
AAAAAAAAG

consensusID : consensus_11879#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 240
fasta sequence

                              [TGCTACAGCACCTACGACAGACAGGCCACGGGGACAGTCGACCCGCGACTTCCTCAGCGCTGTCCACTTCACCACACAGCTTCGAGTCCGGGGAGTCACATCCCCGGAGATCCCGCGGGGGACCCGGCCGCCAGCCTCGTCCCCAGCCCTCCGGCAGCCAGCCAGCACAGCCAGCGTCAGCTCCTGGACAGACCACATCAAGCCGCTTGGAGCAGCCGGTGGGGCGCCCTCGTCCAGCTC]

[+] EMBL BI808994             [TGCTACAGCACCTACGACAGACAGGCCACGGGGACAGTCGACCCGCGACTTCCTCAGCGCTGTCCACTTCACCACACAGCTTCGAGTCCGGGGAGTCACATCCCCGGAGATCCCGCGGGGGACCCGGCCGCCAGCCTCGTCCCCAGCCCTCCGGCAGCCAGCCAGCACAGCCAGCGTCAGCTCCTGGACAGACCACATCAAGCCGCTTGGAGCAGCCGGTGGGGCGCCCTCGTCCAGCTC]




>consensus_11879#2
TGCTACAGCACCTACGACAGACAGGCCACGGGGACAGTCGACCCGCGACTTCCTCAGCGC
TGTCCACTTCACCACACAGCTTCGAGTCCGGGGAGTCACATCCCCGGAGATCCCGCGGGG
GACCCGGCCGCCAGCCTCGTCCCCAGCCCTCCGGCAGCCAGCCAGCACAGCCAGCGTCAG
CTCCTGGACAGACCACATCAAGCCGCTTGGAGCAGCCGGTGGGGCGCCCTCGTCCAGCTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11879#0      TCTTCCACCAAGCCACCCTGGTCCCACCCGTCCGCGGCTCGAGCCCCCCCTCAAAATCCC 60
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      CCAACCCCGTGCGTGCCCGTGCCCGTGCCCCGCCCGCCCGCCCGCGTGCCGGATTTCGCC 120
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      GTAAATCGGCAGCGTTTCCCCGTGCGGGGGGGCAGCGGCGGCGGTTGGATGGCGCTGTCC 180
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      GCGTCGGCGGCGGCGTCGGCCGGGCGGGGGGCGCGGGCGGAGAAGGTGGGGAGGATCTTC 240
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      GAGCGGTTCGATGCCAACGGGGACGGGGGGCTGGACCGCGACGAGATGGCGGCGCTCGTC 300
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      GTCGCCGTCAACCCGCGGGTGAAGTTCAGCGAGGACCAGATCTCCGCCATCCTCGACGAG 360
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      GTGTTCCGCACCTACGCCGAGTTCATACTCCCCGGGGGGCGGGGCCTCTCCCTGCCGGGG 420
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      CTGCTACGCACCTACGACGACGGCGCCGGGGACGTCGACCGCGACTTCCTCGCGCTGTCC 480
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      CTTCCCCCGCTCGAGTCCGGGGAGTCCTCCCCGGAGATCGCCGCGGGGGACCCGGCCGCC 540
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      GCCTCGTCCCCGCCCTCCGGCGCCGCCGCCGCCGCGTCGCTCCTGGACGACCACATCAAG 600
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      CCGCTTGGAGCAGCCGGTGGGGCGCCCTCGTCCAGCTCACGCGCCGCGGCGGCCGCGCCG 660
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      GCGTGGGCGACGTCGCCCAGCCACGGGATTGCGTTCGACTCCTCCTGGGCGCTCCTCGAC 720
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      GACCTGGAGATACTAGTGAAGCGCCTCCGCTCCAAGCAGCTGCGGAGAACATCCTCCATC 780
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      GACACGATCAACGGCAGCGGCGGCGCGGGGAACAACAATTTCGACTCCTTCTCCGAGGCC 840
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      GGGTGGTCAAGGGAGATCTCCGGCCAAGCGGATTCGGCTTCGACCGCCGCGCCATGGGAC 900
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      GAGACGAGCCGCGACTACCTCACCTTCGTCAAGGAGCTCGCCGTGCTCCGCACGCGCGCG 960
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      GACGCCTCCCGCTCACGGGAGGAGGCCTTCGACAATCACATGGTCATCGGCAGGGCGCTC 1020
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      TCCGAGCACCGCCTCTTCCGGGACGCGCTTAGCAGCTTCCGCCGCGCCTGCGAGCTGCAG 1080
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      CCCACTGACGTGCGCCCCCACTTCCGCGCGGGGAACTGCCTCTACGCCCTTGGCCGCCAC 1140
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      TCGGAGGCCAAGGAAGAGTATCTCCTGGCGCTTGAGGCAGCGGAGGCAGGTGGCTCCCAG 1200
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      TCTGCGGACATCCTCCCACAGATCCATGTCAACCTTGGCATTGCCATGGAGGCTGAGGGG 1260
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      ATGGTGCTCGGTGCCTGTGAGCACTACCGAGAGGCTGCCATACTGTGTCCTTCTCATGCC 1320
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      CGGGCGCTGAAGCTCCTCGGTAGCGCGCTCTTTGGTGTTGGTGAGTACCGTGCAGCCGAG 1380
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      AAGGCACTAGAGGAGGCCATCTTCTTGAAGCCAGACTATGCTGATGCACACTGTGATCTT 1440
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      GGGTCAGCCCTGCATGCGATCGGGGATGATGACCGTGCGGTTCAGGAGTTTCAGAAGGCA 1500
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      ATTGATCTCAAACCTGGGCATGTTGATGCCTTGTACAATCTTGGTGGATTGAATATGGAT 1560
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      GCAGGGCGCTTTGTGCGGGCTGCGGAGATGTATACTCGTGTGTTGAGCATCCGACCGAAC 1620
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      CATTGGCGTGCTCAGCTAAACAAGGCTGTTGCTTTGCTTGGCCAGGGGGAGTCTGAGGAG 1680
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      GCCAAGAAGGCACTCAAGGAGGCATTTAAGATGACACAAAGGGTAGAGGTGTATGATGCC 1740
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      ATATCTCATCTGAAGACACTGCAGAAGAAGAAACCAAAGCCTCCCAAAGGAAAAGATGAT 1800
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      AGTCAAGGAGAGGAGGCCTTCGTTGTAGTGGAGCCATCCAAGTTCAAGAGGGTTGGAAGA 1860
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      AAGACTACCTTGCGGCAGGACCTTGCTAATGCCCTTGATATAAGAGCCTTTGAGAAAACG 1920
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      ACAAAGCTTGGCCGCTGTGACGCGGAGCTTCTGAGGAAAGAGATGAACGAGACTGATGTC 1980
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      CCCATATCCTACTCAGGCGCTGGCAACCCAGAGAAGTCAATACGGAAAGCAGCTCTCGAG 2040
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      GTTATTCTCCACAGGCTCCTATCTTTCCTCAAGCCAGATACCTTTCAGGGTTCTGTGAAG 2100
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      GCGATTAACGAAAGAATCCTCTCCGTCCTTGATGCCTCTGGTTCTGGCCGTGTTGACCTT 2160
consensus_11879#1      --------------AATCCTCTCCGTCCTTGATGCCTCTGGTTCTGGCCGTGTTGACCTT 46
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      GGGATGTTCTTTGCTATTATCGCCCCAATTTGTTCTGGTCCTGTGGATAAGCGCAAGCGG 2220
consensus_11879#1      GGGATGTTCTTTGCTATTATCGCCCCAATTTGTTCTGGTCCTGTGGATAAGCGCAAGCGG 106
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      GTTGTCTTTGATGCACTTCTTTGGCGTCCGGCAAGTGAAGGAAGCAGGGGTCAGATTAGG 2280
consensus_11879#1      GTTGTCTTTGATGCACTTCTTTGGCGTCCGGCAAGTGAAGGAAGCAGGGGTCAGATTAGG 166
consensus_11879#2      --------TGCTACAGCACCT--ACGACAGACAGGCCACGGGGACAG---TCGACCCGCG 47
                               ** * **   * *   ** * * ** *  * **   ***   **       *

consensus_11879#0      AGGAGCGATGCACTGTCCTACATCAAACTTCTTCGTGCTGTTTATATACCCACCCATGGG 2340
consensus_11879#1      AGGAGCGATGCACTGTCCTACATCAAACTTCTTCGTGCTGTTTATATACCCACCCATGGG 226
consensus_11879#2      ACTTCCTCAGCGCTGTCC--------ACTTCACCACACAGCTTCGAGTCC-------GGG 92
                       *    *   ** ******        *****  *   * * **  *  **       ***

consensus_11879#0      GCTAGCGACATGCTTGAAATGCATGGGGAGTCTGACCCCACTAT-GGTATCATACACGGA 2399
consensus_11879#1      GCTAGCGACATGCTTGAAATGCATGGGGAGTCTGACCCCACTAT-GGTATCATACACGGA 285
consensus_11879#2      G--AGTCACATCCCCGGAGATCCCGCGGGG---GACCCGGCCGCCAGCCTCGTCCCCAGC 147
                       *  **  **** *  * *   *  * ** *   *****  *     *  ** * * * * 

consensus_11879#0      GTTCCTCGAAATGTTCAATGATCCCGATTGGGGATTTGGAATCCTAAGCACATTGGTGAA 2459
consensus_11879#1      GTTCCTCGAAATGTTCAATGATCCCGATTGGGGATTTGGAATCCTAAGCACATTGGTGAA 345
consensus_11879#2      CCTCCGGCAGCCAGCCAGCACAGCCAGCGTCAGCTCCTGGA--CAGACCACATCAA-GCC 204
                         ***   *      **      **       * *   * *  *  * *****    *  

consensus_11879#0      GCTTGAGGACAGCGATCACATTCGTCACGGCCGCCACACCTGCTCAATTTGCCGATATCC 2519
consensus_11879#1      GCTTGAGGACAGCGATCACATTCGTCACGGCCGCCACACCTGCTCAATTTGCCGATATCC 405
consensus_11879#2      GCTTGGAG-CAGCCGGTGGGGCGCCCTCGTCCAGCTC----------------------- 240
                       *****  * ****            * ** **  * *                       

consensus_11879#0      TATCATTGGTTCCCGATTCAAGGAGACAAAGCACTCCTTTAGCTTGTGCAATCGATGCTA 2579
consensus_11879#1      TATCATTGGTTCCCGATTCAAGGAGACAAAGCACTCCTTTAGCTTGTGCAATCGATGCTA 465
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      CAGTGAAGGGAAGGTTCCATCAGCATTCAAGTTGGATGAGTACAGGTTCAAAGAATATGG 2639
consensus_11879#1      CAGTGAAGGGAAGGTTCCATCAGCATTCAAGTTGGATGAGTACAGGTTCAAAGAATATGG 525
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      TAACGAGTCTGAGGCTCTTATCGATAAGTGCATGTGCTTTAATTTACATTCTAAGAAGCT 2699
consensus_11879#1      TAACGAGTCTGAGGCTCTTATCGATAAGTGCATGTGCTTTAATTTACATTCTAAGAAGCT 585
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      CGAAGCTGATACTTGATCATTCGATCTTTGGTGTCGATTGCTCGAGCATGAATCTGTGTA 2759
consensus_11879#1      CGAAGCTGATACTTGATCATTCGATCTTTGGTGTCGATTGCTCGAGCATGAATCTGTGTA 645
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      TCCCCTTTCTAGGTGCAAAGATCTCTAGATAGTCTCCTGCCCTCTTGTAAACTAAGGTGC 2819
consensus_11879#1      TCCCCTTTGTAGGTGCAAAGATCTCTAGATAGTCTCCTGCCCTCTTGTAAACTAAGGTGC 705
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      TGTTCTGTTCGGAGTTTTCTGAATGTGTTCCAACTACTTGAAAATCCTAATCAATTAGCT 2879
consensus_11879#1      TGTTCTGTTCGGAGTTTTCTGAATGTGTTCCAACTACTTGAAAATCCTAATCAATTAGCT 765
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      ATTGTTCGTCCAAGTGTATGGGAGTGAGAACATGTGAATTCCAAACACACTGTTGTTACA 2939
consensus_11879#1      ATTGTTCGTCCAAAAAAAAAAAAG------------------------------------ 789
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      ATCCCCAATGCTCTTGTTTAATAGAGATCCTTGCTGATATCCATGAGGTTTTATTTGAAC 2999
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      CAAACAATTTTGGGCTATTTTTTTCTTTAATCACACTTGTATGATTTATAGCTTGGGTTG 3059
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      CAGGAATAGATGGTAAAATCACTATGTACATTCAGTTTTAAACTTCTTTGTAAGTTGGTC 3119
consensus_11879#1      ------------------------------------------------------------
consensus_11879#2      ------------------------------------------------------------
                                                                                   

consensus_11879#0      TAACAAAGATTATTTTCTAAGGCAGTCATCATGCTG 3155
consensus_11879#1      ------------------------------------
consensus_11879#2      ------------------------------------