cluster # 11884

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Oryza sativa
cluster # 11884 cluster # 11884 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11884#0 length = 1473 sequences # 7

consensus_11884#1 length = 544 sequences # 1
consensus_11884#2 length = 402 sequences # 1

consensusID : consensus_11884#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1473
fasta sequence

                              [TGCAAACCTAACCCACACTCCTCCTCCCTCTGCGCCTTGGCACCATATCCCTCCACGATCGCCTTCCCTTCTCCTCTCCCGCCGCCGCCGCCGATTCGATCTCCATCCCGCGCCGCCGCCGCTGCTTCCGCCGCATCCTCCCTCCCTGATTTGTGGATATGGCTGATAACGACAAGGAGGC-GGCGGGAGAGGGAGCAACTCCCCGTGGAGCGGACTGGGAGGTGGTGACTCTTACTGCGTCCGCCTATGCGGCGGCGCCGGGGCCGGGTGGAGCAGGAGACAGGCCGGCGGCTGAGACCAAAGGCCTTGATGCAAGTCAGGAAGGAGACCAGACCAAAGGCCTTGATGGAAGTCAGGAAGGGCGGGGCTCGGAGAGCGCGCTGTTCATGTCTGGCCACTTTGTGTTCCCTCCAAGCGAGCATGAGAATCTGCCGATCGATGCCGGCTTTGATGACATCCAGCA-TAAGAAGGATGCGCAGGAAGCGAGCACGAGCGTGGAAGACGAGGGTTTCAAGAATGTCGGTGGGAACTATGGTGCTGGGTTGGAGAGGATTCAGTTCTATGATGAAGGAAGGAACCTCTCGGCCAATGATGTAGAGATGATGATGGGTGATGCTGCTGAGCATGGCTCGTTTCATGCTCAGGACGAGGAGCAAGGTTTAGATGATGATAATGATTTTGATGACTCTCATGACAAATCAGATCTGCCCTCAGAATCTGCGGACAGCAAAAGCCGTGATTCTGGCGCCCCTTGCAAATGCTGGCTGAAGAAACATATGTCATGCCTGTATCACCAAGCCAAGGAAACAAATGCTCTCTGGTCTGTGGTGGTTGCAGCTGCTCTTGTCGGGCTCGTAATCTTGGGACGCTGGCACAAAGACAAACTGCACCTTAAGAATCTTAAATGGCGATCTGGCTCAACAGTGAGAGGGTGACCAACAGGGCTGGTGGGTGTTTTTATGGTCTTCTTCGATGCAACCTCTGATGAGTCATCACATGTCATCTGAAGTTGTAACTGAGACGGTTGGCAATATGATTGTGACAATGACGAAAGGAGTATACCTAATGTAATAATATGAAGTTTGACAGTGGTGCTTGTAGCCTTCGTTTGGTTGCCTTGCCAGCTCTGAGATGCCGAAGTTTCCACCGCTACACACACCACCGTACCATTGTACACTTGCTATGCTACATTTTCTTTTATGTTCTGAGGAATGGCTGTCAACACGCAATTGCATACTGCGAAATCCATGTAACCTCGTTGTTCTTCCAGAACAAATTCAGATGCATTTGTGCTGTTCTTTTAAGAAGGAAAACCTGGGAGTCTCGTTTACTGTTCCTTACAGGAGGTGGTTTCACTTCAGTTTTTATCCCTTCACAACTGGGATGTTGCTTGTCATTATCATGGTTTTTTTTGTATTGCAAGCATTATGATTGCTACCCATATGAATCAGTGTTTAGACCTCCATGGTCGTA]

[+] EMBL AK067285             [TGCAAACCTAACCCACACTCCTCCTCCCTCTGCGCCTTGGCACCATATCCCTCCACGATCGCCTTCCCTTCTCCTCTCCCGCCGCCGCCGCCGATTCGATCTCCATCCCGCGCCGCCGCCGCTGCTTCCGCCGCATCCTCCCTCCCTGATTTGTGGATATGGCTGATAACGACAAGGAGGC GGCGGGAGAGGGAGCAACTCCCCGTGGAGCGGACTGGGAGGTGGTGACTCTTACTGCGTCCGCCTATGCGGCGGCGCCGGGGCCGGGTGGAGCAGGAGACAGGCCGGCGGCTGAGACCAAAGGCCTTGATGCAAGTCAGGAAGGAGACCAGACCAAAGGCCTTGATGGAAGTCAGGAAGGGCGGGGCTCGGAGAGCGCGCTGTTCATGTCTGGCCACTTTGTGTTCCCTCCAAGCGAGCATGAGAATCTGCCGATCGATGCCGGCTTTGATGACATCCAGCA TAAGAAGGATGCGCAGGAAGCGAGCACGAGCGTGGAAGACGAGGGTTTCAAGAATGTCGGTGGGAACTATGGTGCTGGGTTGGAGAGGATTCAGTTCTATGATGAAGGAAGGAACCTCTCGGCCAATGATGTAGAGATGATGATGGGTGATGCTGCTGAGCATGGCTCGTTTCATGCTCAGGACGAGGAGCAAGGTTTAGATGATGATAATGATTTTGATGACTCTCATGACAAATCAGATCTGCCCTCAGAATCTGCGGACAGCAAAAGCCGTGATTCTGGCGCCCCTTGCAAATGCTGGCTGAAGAAACATATGTCATGCCTGTATCACCAAGCCAAGGAAACAAATGCTCTCTGGTCTGTGGTGGTTGCAGCTGCTCTTGTCGGGCTCGTAATCTTGGGACGCTGGCACAAAGACAAACTGCACCTTAAGAATCTTAAATGGCGATCTGGCTCAACAGTGAGAGGGTGACCAACAGGGCTGGTGGGTGTTTTTATGGTCTTCTTCGATGCAACCTCTGATGAGTCATCACATGTCATCTGAAGTTGTAACTGAGACGGTTGGCAATATGATTGTGACAATGACGAAAGGAGTATACCTAATGTAATAATATGAAGTTTGACAGTGGTGCTTGTAGCCTTCGTTTGGTTGCCTTGCCAGCTCTGAGATGCCGAAGTTTCCACCGCTACACACACCACCGTACCATTGTACACTTGCTATGCTACATTTTCTTTTATGTTCTGAGGAATGGCTGTCAACACGCAATTGCATACTGCGAAATCCATGTAACCTCGTTGTTCTTCCAGAACAAATTCAGATGCATTTGTGCTGTTCTTTTAAGAAGGAAAACCTGGGAGTCTCGTTTACTGTTCCTTACAGGAGGTGGTTTCACTTCAGTTTTTATCCCTTCACAACTGGGATGTTGCTTGTCATTATCATGGTTTTTTTTGTATTGCAAGCATTATGATTGCTACCCATATGAATCAGTGTTTAGACCTCCATGGTCGTA]
[+] EMBL AU166212             [               CACTCCTCCTCCCTCTGCGCCTTGGCACCATATCCCTCCACGATCGCCTTCCCTTCTCCTCTCCCGCCGCCGCCGCCGATTCGATCNCCATCCCGCGCCGCCGCCGCTGCTTCCGCCGCATCCTCCCTCCCTGATTTGTGGATATNGCTGATAACGACAAGGAGGC GGCGGGAGAGGGAGCAACTCCCCGTGGAGCGGACTGGGAGGTGGTGACTCTTACTGCGTCCGCCTATGCGGCGGCG CGGGGCCGGGTGGAGCAGGAGACAGGCCGGCNGCTGAGACCAAAGG CTTGATGCAAGTCAGGAAGGAGACCAGACCAAAGG CTTGATGGAAGTCAGGAA GGCGGGG TCNGA AACGCGCTGTTCATGTCTGG CAATTTGTGTTCCt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF280550             [                        TCCCTCTGCGCCTTGGCACCATATCCCTCCACGATCGCCTTCCCTTCTCCTCTCCCGCCGCCGCCGCCGATTCGATCTCCATCCCGCGCCGCCGCCGCTGCTTCCGCCGCATCCTCCCTCCCTGATTTGTGGATATGGCTGATAACGACAAGGAGGC GGCGGGAGAGGGAGCAACTCCCCGTGGAGCGGACTGGGAGGCGGTGACTCTTACTGCGTCCGCCTATGCGGCGGCGCTGGGGCCGGGTGGAGCAGGAGACAGGCCGGCGGCTGAGACCAAAGGCCTTGATGCAAGTCAGGAAGGAGACCAGACCAAAGGCCTTGATGGAAGTCAGGAAGGGCGGGGCTCGGAGAGCGCGCTGTTCATGTCTGGCCACTTTGTGTTCCCTCCAAGCGAGCATGAGAATCTGCCGATCGATGCCGGCTTTGATGACATCCAGCA TAAGAAGGATGCGCAGGAAGCGAGCACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK104586             [                         CCCTCTGCGCCTTGGCACCATATCCCTCCACGATCGCCTTCCCTTCTCCTCTCCCGCCGCCGCCGCCGATTCGATCTCCATCCCGCGCCGCCGCCGCTGCTTCCGCCGCATCCTCCCTCCCTGATTTGTGGATATGGCTGATAACGACAAGGAGGC GGCGGGAGAGGGAGCAACTCCCCGTGGAGCGGACTGGGAGGTGGTGACTCTTACTGCGTCCGCCTATGCGGCGGCGCCGGGGCCGGGTGGAGCAGGAGACAGGCCGGCGGCTGAGACCAAAGGCCTTGATGCAAGTCAGGAAGGAGACCAGACCAAAGGCCTTGATGGAAGTCAGGAAGGGCGGGGCTCGGAGAGCGCGCTGTTCATGTCTGGCCACTTTGTGTTCCCTCCAAGCGAGCATGAGAATCTGCCGATCGATGCCGGCTTTGATGACATCCAGCA TAAGAAGGATGCGCAGGAAGCGAGCACGAGCGTGGAAGACGAGGGTTTCAAGAATGTCGGTGGGAACTATGGTGCTGGGTTGGAGAGGATTCAGTTCTATGATGAAGGAAGGAACCTCTCGGCCAATGATGTAGAGATGATGATGGGTGATGCTGCTGAGCATGGCTCGTTTCATGCTCAGGACGAGGAGCAAGGTTTAGATGATGATAATGATTTTGATGACTCTCATGACAAATCAGATCTGCCCTCAGAATCTGCGGACAGCAAAAGCCGTGATTCTGGCGCCCCTTGCAAATGCTGGCTGAAGAAACATATGTCATGCCTGTATCACCAAGCCAAGGAAACAAATGCTCTCTGGTCTGTGGTGGTTGCAGCTGCTCTTGTCGGGCTCGTAATCTTGGGACGCTGGCACAAAGACAAACTGCACCTTAAGAATCTTAAATGGCGATCTGGCTCAACAGTGAGAGGGTGACCAACAGGGCTGGTGGGTGTTTTTATGGTCTTCTTCGATGCAACCTCTGATGAGTCATCACATGTCATCTGAAGTTGTAACTGAGACGGTTGGCAATATGATTGTGACAATGACGAAAGGAGTATACCTAATGTAATAATATGAAGTTTGACAGTGGTGCTTGTAGCCTTCGTTTGGTTGCCTTGCCAGCTCTGAGATGCCGAAGTTTCCACCGCTACACACACCACCGTACCATTGTACACTTGCTATGCTACATTTTCTTTTATGTTCTGAGGAATGGCTGTCAACACGCAATTGCATACTGCGAAATCCATGTAACCTCGTTGTTCTTCCAGAACAAATTCAGATGCATTTGTGCTGTTCTTTTAAGAAGGAAAACCTGGGAGTCTCGTTTACTGTTCCTTACAGGAGGTGGTTTCACTTCAGTTT                                                                                                             ]
[+] EMBL AU173004             [                                                                               CGCCGCCGCCGCCGATTCGATCTCCATCCCGCGCCGCCGCCGCTGCTTCCGCCGCATCCTCCCTCCCTGATTTGTGGATATGGCTGATAACGACAAGGAGGCAGGCGGGAGAGGGAGCAACTCCCCGTGGAGCGGACTGGGAGGTGGTGACTCTTACTGCGTCCGCCTATGCGGCGGCGCCGGGGCCGGGTGGAGCAGGAGACAGGCCGGCGGCTGAGACCAAAGGCCTTGATGCAAGTCAGGAAGGAGACCAGACCAAAGGCCTTGATGGAAGTCAGGAAGGGCGGGGCTCGGAGAGCGCGCTGTTCATGTCTGGCCACTTTGTGTTCCCTCCAAGCGAGCATGAGAATCTGCCGATCGATGCCGGCTTTGATGACATCCAGCA TAAGAAGGATGCGCAGGAAGCGAGCACGAGCGTGGAAGACGAGGGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU165890             [                                                                               CGCCGCCGCCGCCGATTCGATCNCCATCCCGCGCCGCCGCCGCTGCTTCCGCCGCATCCNCCCTCCCTGATTTGTGGATATGGCTGATAACGACAAGGAGGC GGCGGGAGAGGGAGCAACTCCCCGTGGAGCGGACTGGGAGGTGGTGACTCTTACTGCGTCCGCCTATGCGGCGGCG CNGGGCCGGGTGGAGCAGGAGACAGGCCGGCGG TGAGACCAAAGGCCTTGATGCAAGTCAGGAAGGAGACCAGACCAAAGGCCTTGATGGAAGTCAGGAAGGGCGGGGCTCGGAGA CGCGCTGTTCATGTCTGGCCACTTTGTGTTCCCTCCAAGCGAGCATGAGAATCTGCCGATCGATGCCGGCTTTGATGACATCCAGCATTAAGAAGGATGCGCAGGAAGCGAGCACGAG GTGGNAGACGAAGGTTTCANG ATGTCGGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU030872             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCNCCCTTTGCAAATGCTGNCTGAAGAAACATATGTCATGCCTNTATCACCAAGCCAAGNAAACAAATGCTCTCTGGTCTGTGGTGGTTGCAGCTGCTCTTGTCGGGCTCGTAATCTTGGGACGCTGGCACAANGACAAACTGCNCCTTAAGAATCTTAAATGGCGATCTGGCTCAACAGTGAGAGGGTGNCCAACAGGGCTGGTGGGTGTTTTTATGGTCTTCTTCGATGCANCCTCTGATGAGTCATCACATGTCATCTGAAGTTGTAACTGAGACGGTTGGCAATATGATTGTGACAATGACGAAAGGAGTATNCCTAATGTAATAATATGAAGTTTGACAGTGGTGCTTGTAGCCTTCGTTTGGTTGCCTTGCCAGCTCTGAGATGCCGAAGTTTCCACCGCTACACACACCACCGTACCATTGTACACTTGCTATGCTACATTTTCTTTTATGTTCTGAGGAATGGCTGTCAACACGCAATTGCATACTGCGAAATCCATGTAACCTCGTTGTTCTTCCAGAACAAATTCAGATGCATTTGTGCTGTTCTTTTAAGNNGGAAAAaaaaaaa                                                                                                                                                         ]




>consensus_11884#0
TGCAAACCTAACCCACACTCCTCCTCCCTCTGCGCCTTGGCACCATATCCCTCCACGATC
GCCTTCCCTTCTCCTCTCCCGCCGCCGCCGCCGATTCGATCTCCATCCCGCGCCGCCGCC
GCTGCTTCCGCCGCATCCTCCCTCCCTGATTTGTGGATATGGCTGATAACGACAAGGAGG
CGGCGGGAGAGGGAGCAACTCCCCGTGGAGCGGACTGGGAGGTGGTGACTCTTACTGCGT
CCGCCTATGCGGCGGCGCCGGGGCCGGGTGGAGCAGGAGACAGGCCGGCGGCTGAGACCA
AAGGCCTTGATGCAAGTCAGGAAGGAGACCAGACCAAAGGCCTTGATGGAAGTCAGGAAG
GGCGGGGCTCGGAGAGCGCGCTGTTCATGTCTGGCCACTTTGTGTTCCCTCCAAGCGAGC
ATGAGAATCTGCCGATCGATGCCGGCTTTGATGACATCCAGCATAAGAAGGATGCGCAGG
AAGCGAGCACGAGCGTGGAAGACGAGGGTTTCAAGAATGTCGGTGGGAACTATGGTGCTG
GGTTGGAGAGGATTCAGTTCTATGATGAAGGAAGGAACCTCTCGGCCAATGATGTAGAGA
TGATGATGGGTGATGCTGCTGAGCATGGCTCGTTTCATGCTCAGGACGAGGAGCAAGGTT
TAGATGATGATAATGATTTTGATGACTCTCATGACAAATCAGATCTGCCCTCAGAATCTG
CGGACAGCAAAAGCCGTGATTCTGGCGCCCCTTGCAAATGCTGGCTGAAGAAACATATGT
CATGCCTGTATCACCAAGCCAAGGAAACAAATGCTCTCTGGTCTGTGGTGGTTGCAGCTG
CTCTTGTCGGGCTCGTAATCTTGGGACGCTGGCACAAAGACAAACTGCACCTTAAGAATC
TTAAATGGCGATCTGGCTCAACAGTGAGAGGGTGACCAACAGGGCTGGTGGGTGTTTTTA
TGGTCTTCTTCGATGCAACCTCTGATGAGTCATCACATGTCATCTGAAGTTGTAACTGAG
ACGGTTGGCAATATGATTGTGACAATGACGAAAGGAGTATACCTAATGTAATAATATGAA
GTTTGACAGTGGTGCTTGTAGCCTTCGTTTGGTTGCCTTGCCAGCTCTGAGATGCCGAAG
TTTCCACCGCTACACACACCACCGTACCATTGTACACTTGCTATGCTACATTTTCTTTTA
TGTTCTGAGGAATGGCTGTCAACACGCAATTGCATACTGCGAAATCCATGTAACCTCGTT
GTTCTTCCAGAACAAATTCAGATGCATTTGTGCTGTTCTTTTAAGAAGGAAAACCTGGGA
GTCTCGTTTACTGTTCCTTACAGGAGGTGGTTTCACTTCAGTTTTTATCCCTTCACAACT
GGGATGTTGCTTGTCATTATCATGGTTTTTTTTGTATTGCAAGCATTATGATTGCTACCC
ATATGAATCAGTGTTTAGACCTCCATGGTCGTA

consensusID : consensus_11884#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 544
fasta sequence

                              [TGTATCACCAAGCCAGGAAACAAATGCTCTCTGGTCTGTGGTGGTTGCAGCTGCTCTTGTCGGGCTCGTAATCTTGGGACGCTGGCACAAAGACAAACTGCACCTTAAGAATCTTAAATGGCGATCTGGCTCAACAGTGAGAGGGTGACCAACAGGGCTGGTGGGTGTTTTTATGGTCTTCTTCGATGCAACCTCTGATGAGTCATCACATGTCATCTGAAGTTGTAACTGAGACGGTTGGCAATATGATTGTGACAATGACGAAAGGAGTATACCTAATGTAATAATATGAAGTTTGACAGTGGTGCTTGTAGCCTTCGTTTGGTTGCCTTGCCAGCTCTGAGATGCCGAAGTTTCCACCGCTACACACACCACCGTACCATTGTACACTTGCTATGCTACATTTTCTTTTATGTTCTGAGGAATGGCTGTCAACACGCAATTGCATACTGCGAAATCCATGTAACCTCGTTGTTCTTCCAGAACAAATTCAGATGCATTTGTGCTGTTCTTTTNAGNNGGAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU030290             [TGTATCACCAAGCCAGGAAACAAATGCTCTCTGGTCTGTGGTGGTTGCAGCTGCTCTTGTCGGGCTCGTAATCTTGGGACGCTGGCACAAAGACAAACTGCACCTTAAGAATCTTAAATGGCGATCTGGCTCAACAGTGAGAGGGTGACCAACAGGGCTGGTGGGTGTTTTTATGGTCTTCTTCGATGCAACCTCTGATGAGTCATCACATGTCATCTGAAGTTGTAACTGAGACGGTTGGCAATATGATTGTGACAATGACGAAAGGAGTATACCTAATGTAATAATATGAAGTTTGACAGTGGTGCTTGTAGCCTTCGTTTGGTTGCCTTGCCAGCTCTGAGATGCCGAAGTTTCCACCGCTACACACACCACCGTACCATTGTACACTTGCTATGCTACATTTTCTTTTATGTTCTGAGGAATGGCTGTCAACACGCAATTGCATACTGCGAAATCCATGTAACCTCGTTGTTCTTCCAGAACAAATTCAGATGCATTTGTGCTGTTCTTTTNAGNNGGAAAAAAAAAAAAAAAAAAAAAA]




>consensus_11884#1
TGTATCACCAAGCCAGGAAACAAATGCTCTCTGGTCTGTGGTGGTTGCAGCTGCTCTTGT
CGGGCTCGTAATCTTGGGACGCTGGCACAAAGACAAACTGCACCTTAAGAATCTTAAATG
GCGATCTGGCTCAACAGTGAGAGGGTGACCAACAGGGCTGGTGGGTGTTTTTATGGTCTT
CTTCGATGCAACCTCTGATGAGTCATCACATGTCATCTGAAGTTGTAACTGAGACGGTTG
GCAATATGATTGTGACAATGACGAAAGGAGTATACCTAATGTAATAATATGAAGTTTGAC
AGTGGTGCTTGTAGCCTTCGTTTGGTTGCCTTGCCAGCTCTGAGATGCCGAAGTTTCCAC
CGCTACACACACCACCGTACCATTGTACACTTGCTATGCTACATTTTCTTTTATGTTCTG
AGGAATGGCTGTCAACACGCAATTGCATACTGCGAAATCCATGTAACCTCGTTGTTCTTC
CAGAACAAATTCAGATGCATTTGTGCTGTTCTTTTNAGNNGGAAAAAAAAAAAAAAAAAA
AAAA

consensusID : consensus_11884#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 402
fasta sequence

                              [GGAGTATACCTAATGTAATAATATGAAGTTTGACAGTGGTGCTTGTAGCCTTCGTTTGGTTGCCTTGCCAGCTCTGAGATGCCGAAGTTTCCACCGATACATCACACCACCGTACCATTGTACACTTGCTATGCTACATTTTCTTTTATGTTCTGAGGAATGGCTGTCAACACGCAATTGCATACTGCGAAATCCATGTAACCTCGTTGTTCTTCCAGAACAAATTCAGATGCATTTGTGCTGTTCTTTTAAGAAGGAAAACCTGGGAGTCTGGTTTACTGTTCCTTACAGGAGGTGGTTTCACTTCAGTTTTTATCCCTTCACAACTGGGATGTTGCTTGTCATTATCAAAAAAAAAAAAAAAAAAAAAAAAATGTCATGCCGTTACGTAGCGTATCGTTG]

[-] EMBL CF280551             [GGAGTATACCTAATGTAATAATATGAAGTTTGACAGTGGTGCTTGTAGCCTTCGTTTGGTTGCCTTGCCAGCTCTGAGATGCCGAAGTTTCCACCGATACATCACACCACCGTACCATTGTACACTTGCTATGCTACATTTTCTTTTATGTTCTGAGGAATGGCTGTCAACACGCAATTGCATACTGCGAAATCCATGTAACCTCGTTGTTCTTCCAGAACAAATTCAGATGCATTTGTGCTGTTCTTTTAAGAAGGAAAACCTGGGAGTCTGGTTTACTGTTCCTTACAGGAGGTGGTTTCACTTCAGTTTTTATCCCTTCACAACTGGGATGTTGCTTGTCATTATCAAAAAAAAAAAAAAAAAAAAAAAAATGTCATGCCGTTACGTAGCGTATCGTTG]




>consensus_11884#2
GGAGTATACCTAATGTAATAATATGAAGTTTGACAGTGGTGCTTGTAGCCTTCGTTTGGT
TGCCTTGCCAGCTCTGAGATGCCGAAGTTTCCACCGATACATCACACCACCGTACCATTG
TACACTTGCTATGCTACATTTTCTTTTATGTTCTGAGGAATGGCTGTCAACACGCAATTG
CATACTGCGAAATCCATGTAACCTCGTTGTTCTTCCAGAACAAATTCAGATGCATTTGTG
CTGTTCTTTTAAGAAGGAAAACCTGGGAGTCTGGTTTACTGTTCCTTACAGGAGGTGGTT
TCACTTCAGTTTTTATCCCTTCACAACTGGGATGTTGCTTGTCATTATCAAAAAAAAAAA
AAAAAAAAAAAAAATGTCATGCCGTTACGTAGCGTATCGTTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11884#0      TGCAAACCTAACCCACACTCCTCCTCCCTCTGCGCCTTGGCACCATATCCCTCCACGATC 60
consensus_11884#1      ------------------------------------------------------------
consensus_11884#2      ------------------------------------------------------------
                                                                                   

consensus_11884#0      GCCTTCCCTTCTCCTCTCCCGCCGCCGCCGCCGATTCGATCTCCATCCCGCGCCGCCGCC 120
consensus_11884#1      ------------------------------------------------------------
consensus_11884#2      ------------------------------------------------------------
                                                                                   

consensus_11884#0      GCTGCTTCCGCCGCATCCTCCCTCCCTGATTTGTGGATATGGCTGATAACGACAAGGAGG 180
consensus_11884#1      ------------------------------------------------------------
consensus_11884#2      ------------------------------------------------------------
                                                                                   

consensus_11884#0      CGGCGGGAGAGGGAGCAACTCCCCGTGGAGCGGACTGGGAGGTGGTGACTCTTACTGCGT 240
consensus_11884#1      ------------------------------------------------------------
consensus_11884#2      ------------------------------------------------------------
                                                                                   

consensus_11884#0      CCGCCTATGCGGCGGCGCCGGGGCCGGGTGGAGCAGGAGACAGGCCGGCGGCTGAGACCA 300
consensus_11884#1      ------------------------------------------------------------
consensus_11884#2      ------------------------------------------------------------
                                                                                   

consensus_11884#0      AAGGCCTTGATGCAAGTCAGGAAGGAGACCAGACCAAAGGCCTTGATGGAAGTCAGGAAG 360
consensus_11884#1      ------------------------------------------------------------
consensus_11884#2      ------------------------------------------------------------
                                                                                   

consensus_11884#0      GGCGGGGCTCGGAGAGCGCGCTGTTCATGTCTGGCCACTTTGTGTTCCCTCCAAGCGAGC 420
consensus_11884#1      ------------------------------------------------------------
consensus_11884#2      ------------------------------------------------------------
                                                                                   

consensus_11884#0      ATGAGAATCTGCCGATCGATGCCGGCTTTGATGACATCCAGCATAAGAAGGATGCGCAGG 480
consensus_11884#1      ------------------------------------------------------------
consensus_11884#2      ------------------------------------------------------------
                                                                                   

consensus_11884#0      AAGCGAGCACGAGCGTGGAAGACGAGGGTTTCAAGAATGTCGGTGGGAACTATGGTGCTG 540
consensus_11884#1      ------------------------------------------------------------
consensus_11884#2      ------------------------------------------------------------
                                                                                   

consensus_11884#0      GGTTGGAGAGGATTCAGTTCTATGATGAAGGAAGGAACCTCTCGGCCAATGATGTAGAGA 600
consensus_11884#1      ------------------------------------------------------------
consensus_11884#2      ------------------------------------------------------------
                                                                                   

consensus_11884#0      TGATGATGGGTGATGCTGCTGAGCATGGCTCGTTTCATGCTCAGGACGAGGAGCAAGGTT 660
consensus_11884#1      ------------------------------------------------------------
consensus_11884#2      ------------------------------------------------------------
                                                                                   

consensus_11884#0      TAGATGATGATAATGATTTTGATGACTCTCATGACAAATCAGATCTGCCCTCAGAATCTG 720
consensus_11884#1      ------------------------------------------------------------
consensus_11884#2      ------------------------------------------------------------
                                                                                   

consensus_11884#0      CGGACAGCAAAAGCCGTGATTCTGGCGCCCCTTGCAAATGCTGGCTGAAGAAACATATGT 780
consensus_11884#1      ------------------------------------------------------------
consensus_11884#2      ------------------------------------------------------------
                                                                                   

consensus_11884#0      CATGCCTGTATCACCAAGCCAAGGAAACAAATGCTCTCTGGTCTGTGGTGGTTGCAGCTG 840
consensus_11884#1      ------TGTATCACCAAGCCA-GGAAACAAATGCTCTCTGGTCTGTGGTGGTTGCAGCTG 53
consensus_11884#2      ------------------------------------------------------------
                                                                                   

consensus_11884#0      CTCTTGTCGGGCTCGTAATCTTGGGACGCTGGCACAAAGACAAACTGCACCTTAAGAATC 900
consensus_11884#1      CTCTTGTCGGGCTCGTAATCTTGGGACGCTGGCACAAAGACAAACTGCACCTTAAGAATC 113
consensus_11884#2      ------------------------------------------------------------
                                                                                   

consensus_11884#0      TTAAATGGCGATCTGGCTCAACAGTGAGAGGGTGACCAACAGGGCTGGTGGGTGTTTTTA 960
consensus_11884#1      TTAAATGGCGATCTGGCTCAACAGTGAGAGGGTGACCAACAGGGCTGGTGGGTGTTTTTA 173
consensus_11884#2      ------------------------------------------------------------
                                                                                   

consensus_11884#0      TGGTCTTCTTCGATGCAACCTCTGATGAGTCATCACATGTCATCTGAAGTTGTAACTGAG 1020
consensus_11884#1      TGGTCTTCTTCGATGCAACCTCTGATGAGTCATCACATGTCATCTGAAGTTGTAACTGAG 233
consensus_11884#2      ------------------------------------------------------------
                                                                                   

consensus_11884#0      ACGGTTGGCAATATGATTGTGACAATGACGAAAGGAGTATACCTAATGTAATAATATGAA 1080
consensus_11884#1      ACGGTTGGCAATATGATTGTGACAATGACGAAAGGAGTATACCTAATGTAATAATATGAA 293
consensus_11884#2      ---------------------------------GGAGTATACCTAATGTAATAATATGAA 27
                                                        ***************************

consensus_11884#0      GTTTGACAGTGGTGCTTGTAGCCTTCGTTTGGTTGCCTTGCCAGCTCTGAGATGCCGAAG 1140
consensus_11884#1      GTTTGACAGTGGTGCTTGTAGCCTTCGTTTGGTTGCCTTGCCAGCTCTGAGATGCCGAAG 353
consensus_11884#2      GTTTGACAGTGGTGCTTGTAGCCTTCGTTTGGTTGCCTTGCCAGCTCTGAGATGCCGAAG 87
                       ************************************************************

consensus_11884#0      TTTCCACCGCTACA-CACACCACCGTACCATTGTACACTTGCTATGCTACATTTTCTTTT 1199
consensus_11884#1      TTTCCACCGCTACA-CACACCACCGTACCATTGTACACTTGCTATGCTACATTTTCTTTT 412
consensus_11884#2      TTTCCACCGATACATCACACCACCGTACCATTGTACACTTGCTATGCTACATTTTCTTTT 147
                       ********* **** *********************************************

consensus_11884#0      ATGTTCTGAGGAATGGCTGTCAACACGCAATTGCATACTGCGAAATCCATGTAACCTCGT 1259
consensus_11884#1      ATGTTCTGAGGAATGGCTGTCAACACGCAATTGCATACTGCGAAATCCATGTAACCTCGT 472
consensus_11884#2      ATGTTCTGAGGAATGGCTGTCAACACGCAATTGCATACTGCGAAATCCATGTAACCTCGT 207
                       ************************************************************

consensus_11884#0      TGTTCTTCCAGAACAAATTCAGATGCATTTGTGCTGTTCTTTTAAGAAGGAAAACCTGGG 1319
consensus_11884#1      TGTTCTTCCAGAACAAATTCAGATGCATTTGTGCTGTTCTTTTNAGNNGGAAAAAAAAAA 532
consensus_11884#2      TGTTCTTCCAGAACAAATTCAGATGCATTTGTGCTGTTCTTTTAAGAAGGAAAACCTGGG 267
                       ******************************************* **  ******      

consensus_11884#0      AGTCTCGTTTACTGTTCCTTACAGGAGGTGGTTTCACTTCAGTTTTTATCCCTTCACAAC 1379
consensus_11884#1      AAAAAAAAAAAA------------------------------------------------ 544
consensus_11884#2      AGTCTGGTTTACTGTTCCTTACAGGAGGTGGTTTCACTTCAGTTTTTATCCCTTCACAAC 327
                       *         *                                                 

consensus_11884#0      TGGGATGTTGCTTGTCATTATCATGGTTTTTTTTGTATTGCAAGCATTATGATTGCTACC 1439
consensus_11884#1      ------------------------------------------------------------
consensus_11884#2      TGGGATGTTGCTTGTCATTATCAAAAAAAAAAAAAAAAAAAAAAAAATGTCATGCCGTTA 387
                                                                                   

consensus_11884#0      CATATGAATCAGTGTTTAGACCTCCATGGTCGTA 1473
consensus_11884#1      ----------------------------------
consensus_11884#2      CGTAGCGTATCGTTG------------------- 402