These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11888#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1987 fasta sequence [ATCCGCCGCCTCCAAAAAGCATCCACCTGTACCCACAAACGGAAGCAAAGATTCCAACTTTCGATCGAGAGCCTCGCCGTCGATTCCCCCACCTCGGCTGAGCCCGGATTCCGAGGCAGCCCCCCCATGGCGGGAGCCGAG-CGACCC-TACTACCCGCCGCGGCCCACGGACGGCG-GCTCCGGCCAGCCCGCCGGCTGCGACTCGCCGATGAGGTGGGACGACGACGACGAAGACCACGGTGGCGGCGGCGGCGATGGCATGACCGCCGTTGCGGGA-TTCAACCTGTTCGAGGAAGAATCAGATGACCCTCCTGCCAAAAATGGCGTGGTCGACGATCCTGATACTACCACTACAAGTGATTGCAACACTGATATGAGTGAGGATC-TTGTAAAGAGGGAAGAAGGGATGAACTTCCATTGTGATCCCCCGCTTCACGAACATACTGGCATCTGGGTGCCTGTTTCTGTCCCGCCAATGACCAAACGCGATCACGAGGAGTGGCATAAGGGCTTTGGTCATAATGGTGACTACTTTCCAGAAGACGAATTTAACTGGGAGATAGATGAAGAGAACAAGGAGATGACGATGTGGGATGTATTTTCTGAGATGGTTGTTGCGGCAAAGGATAAGGTAATATCAGTTGCTTCGTATGATCTTGGGAGGCGTGGTATGTCTAAGTTGTCCAAGTTTTTCTTCCAAGAAGCTTGGAAGGATATGGCCCAAACACTTGCAGATGCCAATGCTGGCATTGCGAATGAGCTCCTAGAGACTGAACGAACAATATGGTTACCTGACAGCGCTGCCAGCGCCTGCATGCTCTGTAACGTGCGTTTTCATCCGATAATGTGCTCTCGACATCATTGTCGTTTCTGTGGTGGTGTGTTTTGTGGTGGTTGTTCAAAGGGTAGAAGCTTGATGCCACCGAAATTTAATACTTCAGAACCTCAAAGGGTTTGTGATGTTTGCGGGGTACGTCTAGAGAGTATTCAACCTTACTTGATAAATCGGATCAGTCGTGCTTCACAACCTCCAACTCATGATGTCACTGATCTGAGTACATTGAGGTCGTGGCTGAACTTCCCTTACGCACACACAATGGAATATGAGATCTACAAGGCTGCAAATTCTTTGAATAGTTACTGTAAGGTGGGAAGACTGAAACCAGAAAAGGCTATCCCCTATACTATCCTTAAACAAGCAAAAGGCCTTGCTATAATTACTGTAGCAAAAGTCGGTATGATGGTTGCATATAAAGTTGGTACTGGGCTGGTTATTGCTCGAAGAGCCGATGGTTCATGGTCACCCCCTTCAGCAATCGCCACTTGTGGTATTGGATATGGAGCTCAGGCTGGAGGTGAGCTAGCTGATTTCATTATTGTGCTGAGGAACACAGAAGCTGTTAAAACTTTCAGTGGAAAGGCACATTTGTCAGTCGGTGCTGGTGTAAGTGCTTCTGTTGGCCATGTTGGACGAGTAGCTGAGGCTGATTTTCGTGCCGGTGATGGTGGTTATGCTGCATGTTACACATACAGTTGTAGCAAAGGTGCTTTTGTGGGCTGTGCTCTCAATGGTAGCTTAGTATCAACCCGAGACACAGAAAATGCCCGATTTTATGGTGGTCCAATAAAGGCACCCGATATCCTTATGGGATCCATGGCTAGACCACCCGCAGCCGCTGCGCTCTACAAGGTTCTGTCAGAATTGTTTGACAATCCTGAGAAGCAATCGCTTTAGGTCTCTAGTATGCGTTGCGTCTTCTGGTAAATACATTCTGGAACTCTCTGTCAAGTAATTGGATTGCGGTTTTGCGATCTTTTCACTTATTCGTTGGTTGCAGTTTACGCAATTGTACAGTCTGCCATTCATTGACACGCCAAAGGTTTCACATCATGGTTACCACAAAACCAAATGTAAATACATGTACATTGGATCCCTTCTTGCTTCATCAAGATATAAAAGAAAAAAAAAATATACTATTTTCCAAAAA] [+] EMBL AK121278 [ATCCGCCGCCTCCAAAAAGCATCCACCTGTACCCACAAACGGAAGCAAAGATTCCAACTTTCGATCGAGAGCCTCGCCGTCGATTCCCCCACCTCGGCTGAGCCCGGATTCCGAGGCAGCCCCCCCATGGCGGGAGCCGAG CGACCC TACTACCCGCCGCGGCCCACGGACGGCG GCTCCGGCCAGCCCGCCGGCTGCGACTCGCCGATGAGGTGGGACGACGACGACGAAGACCACGGTGGCGGCGGCGGCGATGGCATGACCGCCGTTGCGGGA TTCAACCTGTTCGAGGAAGAATCAGATGACCCTCCTGCCAAAAATGGCGTGGTCGACGATCCTGATACTACCACTACAAGTGATTGCAACACTGATATGAGTGAGGATC TTGTAAAGAGGGAAGAAGGGATGAACTTCCATTGTGATCCCCCGCTTCACGAACATACTGGCATCTGGGTGCCTGTTTCTGTCCCGCCAATGACCAAACGCGATCACGAGGAGTGGCATAAGGGCTTTGGTCATAATGGTGACTACTTTCCAGAAGACGAATTTAACTGGGAGATAGATGAAGAGAACAAGGAGATGACGATGTGGGATGTATTTTCTGAGATGGTTGTTGCGGCAAAGGATAAGGTAATATCAGTTGCATCGTATGATCTTGGGAGACGTGGTATGTCTATGTTGTCCAAGTTTTTCTTCCAAGAAGCTTGGAAGGATATGGCCCAAACACTTGCAGATGCCAATGCTGGCATTGCGAATGAGCTCCTAGAGACTGAACGAACAATATGGTTACCTGACAGCGCTGCCAGCGCCTGCATGCTCTGTAACGTGCGTTTTCATCCGATAATGTGCTCTCGACATCATTGTCGTTTCTGTGGTGGTGTGTTTTGTGGTGGTTGTTCAAAGGGTAGAAGCTTGATGCCACCGAAATTTAATACTTCAGAACCTCAAAGGGTTTGTGATGTTTGCGGGGTACGTCTAGAGAGTATTCAACCTTACTTGATAAATCGGATCAGTCGTGCTTCACAACCTCCAACTCATGATGTCACTGATCTGAGTACATTGAGGTCGTGGCTGAACTTCCCTTACGCACACACAATGGAATATGAGATCTACAAGGCTGCAAATTCTTTGAATAGTTACTGTAAGGTGGGAAGACTGAAACCAGAAAAGGCTATCCCCTATACTATCCTTAAACAAGCAAAAGGCCTTGCTATAATTACTGTAGCAAAAGTCGGTATGATGGTTGCATATAAAGTTGGTACTGGGCTGGTTATTGCTCGAAGAGCCGATGGTTCATGGTCACCCCCTTCAGCAATCGCCACTTGTGGTATTGGATATGGAGCTCAGGCTGGAGGTGAGCTAGCTGATTTCATTATTGTGCTGAGGAACACAGAAGCTGTTAAAACTTTCAGTGGAAAGGCACATTTGTCAGTCGGTGCTGGTGTAAGTGCTTCTGTTGGCCATGTTGGACGAGTAGCTGAGGCTGATTTTCGTGCCGGTGATGGTGGTTATGCTGCATGTTACACATACAGTTGTAGCAAAGGTGCTTTTGTGGGCTGTGCTCTCAATGGTAGCTTAGTATCAACCCGAGACACAGAAAATGCCCGATTTTATGGTGGTCCAATAAAGGCACCCGATATCCTTATGGGATCCATGGCTAGACCACCCGCAGCCGCTGCGCTCTACAAGGTTCTGTCAGAATTGTTTGACAATCCTGAGAAGCAATCGCTTTAGGTCTCTAGTATGCGTTGCGTCTTCTGGTAAATACATTCTGGAACTCTCTGTCAAGTAATTGGATTGCGGTTTTGCGATCTTTTCACTTATTCGTTGGTTGCAGTTTACGCAATTGTACAGTCTGCCATTCATTGACACGCCAAAGGTTTCACATCATGGTTACCACAAAACCAAATGTAAATACATGTACATTGGATCCCTTCTTGCTTCATCAAGATATAAAAGAAAAAAAAAATAT ] [+] EMBL C27139 [ CCAAAAAGCATCCACCTGTACCCACAAACGGAAGCAAAGATTCCAACTTTCGATCGAGAGCCTCGCCGTCGATTCCCCCACCTCGGCTGAGCCCGGATTCCGAGGCAGCCCCCCCATGGCGGGA CGAGTCGACCCTTACTACCCGCCGCGGCCCACGGA GGCGTTCTCNNGCCAGCCCGCCGGCTGCGACTCGCCGATGAGGTGGGACGACGACGACGAAGACCACGGTGGCGGCGGCGGCGATGGCATGACCGCCGTT NGGGATTTCAACCTGTTCGAGGAAGAATCAGATGACCCTCCTGCCAAAAATGGCGTNGTCGACGATCCTGATACTACCACTACAAGTGATTNCAACACTGATATGAGTTAGGATCTTTNTAAAGAGGGAAGAAGGGATGAA TTNCATTGTGAT CCCCGTTTTACGAACATAATTGCATnt ] [+] EMBL CB630082 [ AGATT CTTTTTTCGATCGAGAGCCTCGCCGTCGATTCCCCCACCTCGGCTGAGCCCGGATTCCGAGGCAGCCCCCCCATGGCGGGAGCCGAG CGACCC TACTACCCGCCGCGGCCCACGGACGGCG GCTCCGGCCAGCCCGCCGGCTGCGACTCGCCGATGAGGTGGGACGACGACGACGAAGACCACGGCGGCGGCGGCGGCGATGGCATGACCGCCGTTGCGGGA TTCAACCTGTTCGAGGAAGAATCAGATGACCCTCCTGCCAAAAATGGCGTGGTCGACGATCCTGATACTACCACTACAAGTGATTGCAACACTGATATGAGTGAGGATC TTGTAAAGAGGGAAGAAGGGATGAACTTCCATTGTGATCCCCCGCTTCATGAACATACTGGCATCTGGGTGCCTGTTTCTGTCCCGCCAATGACCAAACGCGATCACGAGGAGTGGCATAAGGGCTTTGGTCATAATGGTGACTACTTTCCAGAAGACGAATTTAACTGGGAGATAGATGAAGAGAACAAGGAGATGACGATGTGGGATGTATTTTCTGAGATGGTTGTTGCGGCAAAGGATAAGGTAATATCAGTTGCTTCGTATGATCTTGGGAGGCGTGGTATGTCTAAGTTGTCCAAGTTTTTCTTCCAAGAAGCTTGGAAGGATATGGCCCAAACACTTGCAGATGCCAATGCTGGCATTGCGAATGAGCTCCTAGAGACTGAACGAACAATATGGTTACCTGACAGCGCTGCCAGCG ] [+] EMBL CA765312 [ GTGGGATGTATTTTCTGAGATGGTTGTTGCGGCAAAGGATAAGGTAATATCAGTTGCTTCGTATGATCTTGGGAGGCGTGGTATGTCTAAGTTGTCCAAGTTTTTCTTCCAAGAAGCTTGGAAGGATATGGCCCAAACACTTGCAGATGCCAATGCTGGCATTGCGAATGAGCTCCTAGAGACTGAACGAACAATATGGTTACCTGACAGCGCTGCCAGCGCCTGCATGCTCTGTAACGTGCGTTTTCATCCGATAATGTGCTCTCGACATCATTGTCGTTTCTGTGGTGGTGTGTTTTGTGGTGGTTGTTCAAAGGGTAGAAGCTTGATGCCACCGAAATTTAATACTTCAGAACCTCAAAGGGTTTGTGATGTTTGCGGGGTACGTCTAGAGAGTATTCAACCTTACTTGATGAATCGGATCAGTCGTGCTTCACAACCTCCAACTCATGATGTCACTGATCTGAGTACATTGAGGTCGTGGCTGAACTTCCCTTACGCACACACAATGGAATATGAGATCTACAAGGCTGCAAATTCTTTGAATAGTTACTGTAAGGTGGGAAGACTGAAACCAGAAAAGGCTATCCCCTATACTATCCTTAAACAAGCAAAAGGCCTTGCTATAATTACTGTAGCAAAAGTCGGTATGATGGNTGCATATAAAGNTGGTACTGGGCTGGNTATTGCTCGAANAGCCGATGGTTCATGGTCACCCCCTTCAGCAATCGNCACTTGNGGTATTGGATATGGAGCTCAGGCTGGAGGNGAGCTAGCTGATTTCATTATTGGGCTGAGGAACACAAAAACTGNTAAAACNTTTAGNGGNAAGGC CANTTGTCAGTCGGGGCTGGGGGAAGNGCTTNTGTTGG ] [-] EMBL CB630083 [ GCCGATGGTTCATGGTCACCCCTTTCAGCAATCGCCACTTGTGGTATTGGATATGGAGCTCAGGCTGGAGGTGAGCTAGCTGATTTCATTATTGTGCTGAGGAACACAGAAGCTGTTAAAACTTTCAGTGGAAAGGCACATTTGTCAGTCGGTGCTGGTGTAAGTGCTTCTGTTGGCCATGTTGGACGAGTAGCTGAGGCTGATTTTCGTGCCGGTGATGGTGGTTATGCTGCATGTTACACATACAGTTGTAGCAAAGGTGCTTTTGTGGGCTGTGCTCTCAATGGTAGCTTAGTATCAACCCGAGACACAGAAAATGCCCGATTTTATGGTGGTCCAATAAAGGCACCCGATATCCTTATTGGATCCATGGCTAGACCACCTGCAGCCGCTGCGCTCTACAAGGTTCTGTCAGAATTGTTTGACAATCCTGAGAAGCAATCGCTTTAGGTCTCTAGTATGCGTTGCGTCTTCTGGTAAATACATTCTGGAA CTCTGTCAAGTAATTGGATTGCGGTTTTGCGATCTTTTCACTTATTCGTTGGTTGCAGTTTACGCAATTGTACAGTCTGCCATTCATTGACACGCCAAAGGTTTCACATCATGGTTACCACAAAACCAAATGTAAATACATGTACATTGGATCCCTTCTTGCTTCA AA ATATAAAAGAAAAAAAtat ] [-] EMBL CB639329 [ CACTTGTGGTATTGGATATGGAGCTCAGGCTGGAGGTGAGCTAGCTGATTTCATTATTGTGCTGAGGAACACAGAAGCTGTTAAAACTTTCAGTGGAAAGGCACATTTGTCAGTCGGTGCTGGTGTAAGTGCTTCTGTTGGCCATGTTGGACGAGTAGCTGAGGCTGATTTTCGTGCCGGTGATGGTGGTTATGCTGCATGTTACACATACAGTTGTAGCAAAGGTGCTTTTGTGGGCTGTGCTCTCAATGGTAGCTTAGTATCAACCCGAGACACAGAAAATGCCCGATTTTATGGTGGTCCAATAAAGGCACCCGATATCCTTATGGGATCCATGGCTAGACCACCCGCAGCCGCTGCGCTCTACAAGGTTCTGTCAGAATTGTTTGACAATCCTGAGAAGCAATCGCTTTAGGTCTCTAGTATGCGTTGCGTCTTCTGGTAAATACATTCTGGAACTCTCTGTCAAGTAATTGGATTGCGGTTTTGCGATCTTTTCACTTATTCGTTGGTTGCAGTTTACGCAATTGTACAGTCTGCCATTCATTGACACGCCAAAGGTTTCACATCATGGTTACCACAAAACCAAAT ] [-] EMBL CB639326 [ GGTATTGGATATGGAGCTCAGGCTGGAGGTGAGCTAGCTGATTTCATTATTGTGCTGAGGAACACAGAAGCTGTTAAAACTTTCAGTGGAAAGGCACATTTGTCAGTCGGTGCTGGTGTAAGTGCTTCTGTTGGCCATGTTGGACGAGTAGCTGAGGCTGATTTTCGTGCCGGTGATGGTGGTTATGCTGCATGTTACACATACAGTTGTAGCAAAGGTGCTTTTGTGGGCTGTGCTCTCAATGGTAGCTTAGTATCAACCCGAGACACAGAAAATGCCCGATTTTATGGTGGTCCAATAAAGGCACCCGATATCCTTATGGGATCCATGGCTAGACCACCCGCAGCCGCTGCGCTCTACAAGGTTCTGTCAGAATTGTTTGACAATCCTGAGAAGCAATCGCTTTAGGTCTCTAGTATGCGTTGCGTCTTCTGGTAAATACATTCTGGAACTCTCTGTCAAGTAATTGGATTGCGGTTTTGCGATCTTTTCACTTATTCGTTGGTTGCAGTTTACGCAATTGTACAGTCTGCCATTCATTGACACGCCAAAGGTTTCACATCATGGTTACCACAAAACCAAAT ] [-] EMBL CF305781 [ GCTGGTGTAAGTGCTTCTGTTGGCCATGTTGGACGAGTAGCTGAGGCTGATTTTCGTGCCGGTGATGGTGGTTATGCTGCATGTTACACATACAGTTGTAGCAAAGGTGCTTTTGTGGGCTGTGCTCTCAATGGTAGCTTAGTATCAACCCGAGACACAGAAAATGCCCGATTTTATGGTGGTCCAATAAAGGCACCCGATATCCTTATGGGATCCATGGCTAGACCACCCGCAGCCGCTGCGCTCTACAAGGTTCTGTCAGAATTGTTTGACAATCCTGAGAAGCAATCGCTTTAGGTCTCTAGTATGCGTTGCGTCTTCTGGTAAATACATTCTGGAACTCTCTGTCAAGTAATTGGATTGCGGTTTTGCGATCTTTTCACTTATTCGTTGGTTGCAGTTTACGCAATTGTACAGTCTGCCATTCATTGACACGCCAAAGGTTTCACATCATGGTTACCACAAAACCAAATGTAAATACATGTACATTGGATCCCTTCTTGCTTCATCAAGATATAAAAGAAAAAAAAta ] [+] EMBL AU166822 [ TGTGGGCTGTGCTCTCAATGGTAGCTTAGTATCAACCCGAGACACAGAAAATGCCCGATTTTATGGTGGTCCAATAAAGGCACCCGATATCCTTATGGGATCCATGGCTAGACCACCCGCAGCCGCTGCGCTCTACAAGGTTCTGTCAGAATTGTTTGACAATCCTGAGAAGCAATCGCTTTAGGTCTCTAGTATGCGTTGCGTCTTCTGGTAAATACATTCTGGAACTCTCTGTCAAGTAATTGGATTGCGGTTTTGCGATCTTTTCACTTATTCGTTGGTTGCAGTTTACGCAATTGTACAGTCTGCCATTCATTGACACGCCAAAGGTTTCACATCATGGTTACCACAAAACCAAATGTAAATACATGTACATTGGATCCCTTCTTGCTTCATCAAGATATAAAAGAAAAAAAATATATACTATTTTCCAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||