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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11896#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 3203 fasta sequence
[CAAGACCTGTGGCAATACAGACACCCAATAATCCTAGTGTGTCTGATCAGGATCTACAACAGCAACAACTATGGAACTTTGCACAAAGAACAACAGCTTTACCTTTTGGGCGTGGGGCTTTTACTTTAGCTACAACTTACACACTGTTAACAGAGGCTCTGGTTTTCCCAAAGCTTGTTTTGGCTGGTCGGTTGCCTGCACAACAGAATGCAACAGTTAATCTTGACCTAAGTACTAGAAGCGTCTCAGAATTCAAATCTTGGGCTGAGTTTCACAATGGTGTCGCTGCTGGGCTCAGGCTTGCTCCTTTTCAGGAGAAAATGTTAAGAACCTGGATACAATATAATAGACCTTCTGAACCAAATTTTACTCATGCTGGTCTGCTTCTTGCATTTGGTTTGCATGAACATCTACGAGTTTTAACTATGACCGACGCTTACCGATATCTCTCCCAGGAGCATGATATAACTAGACTTGGTTTGCTACTTGGTTTGGCTGCATCTAATAGGGGGACAATGCACCCGGCAATTTCAAAGATGCTCTATTTTCATGTCCCTTCCCGGCATCCATCTTCTACGCCAGAGTTGGAATTACCTACTCTTCTGCAGTCAGCAGCAGTGATGGGAATTGGACTTCTCTATGAAGGGTCAGCACATGCATTAACCATGAAAATTCTTCTGGGTGAGATTGGCCGAAGAAGTGGTGGTGATAATGTGCTAGAAAGAGAAGGCTATGCTGTTGCTGCAGGCTCTGCATTAGGACTTGTTGCATTAGGTCGTGGAAGCAATGCTTTCGGATTCATGGACACTTTCCTGGACCGGCTTTTTGAATACATTGGCAGTAAAGAAGTCTACCATGAAAAACACTTAAATGCAGCAATAGCTGCTGATGAGCAAAGTGGCAACACCGGACAGATGATGGAAGGAGCACAAATAAATGTTGATGTTACTGCACCTGGAGCAATAATTGCTCTAGCCTTGATATTTCTGAAAGCAGAGTCAGAAGAAATTGCAGCTAGACTCAGTGTTCCCAATAGTCACTTTGATCTGCAGTATGTGAGACCTGATTTTGTAATGCTTCGCATTGTAGCACGGAATTTAATATTGTGGAACAGAATACAACCTACCAAAGATTGGGTTGAGTCTCAAGTTCCTTCATTTGTCAACTTTGGTGTTTCCAATACGAGTCAAGAGGCTATGGACAGTGATGAATTGGATAGCGAAGCTCTGTTTCAAGCTTATGTTAATATTGTCACTGGAGCATGCATTGCACTTGGTCTCAAATATGCTGGCAGTAGAAATAGTGATGCCCAAGAACTACTCTACGCTTATGCCGTCCATTTTCTCAATGAGATCAAACACATATCTATTCAGACTGCAAGCATATTGCCAAAGGGATTGTTGCAGCATGTTGATCGTGGAACTCTTGAGCTCTGCTTGCATCTTATTGTTCTCTCTCTATCACTGGTAATGGCAGGATCTGGACATTTACAAACTTTCCGCTTACTGCGTTATCTGAGGGGAAGAAGTTCTGCAGAAGGACAAGTAAATTATGGACTGCAGATGGCTGTAAGCTTGGCTATAGGATTCTTATTCCTTGGAGGTGGTACACACACATTCTCAACTTCAAATAGTGCAGTTGCCGCATTACTCATCACCCTTTACCCACGTTTGCCTACTGGACCAAATGATAATCGCTGTCATCTCCAGGCATTCAGGCATCTGTATGTAATAGCTACAGAACCTCGATGGATTCAGACAGTAGATGTTGACACAGGACTTCCGGTGTATTGTCCTCTTGAAGTGACAGTTGCTGAAACGGAGTATTATGACGAGACTAATTACTGTGAAGTGACACCTTGTCTTCTGCCAGAGCGCTCAGTGCTGAAGAACATTCGAGTTTGTGGACCCAGATATTGGTCTCAGGTGATTACACTTACACCTGAAGATAAGCCATGGTGGAAATCTGGAGACAGGACTGACCCATTCAATGGTGGAGTACTCTATATAAAACGGAAAGTTGGATCTTGTTCCTACTCAGATGATCCAATTGGATGCCAATCTTTGCTTTCTCGAGCAATGCATGAGGTTTGTGATACACCATCCACGAGCTGCAGTAATCAGGCAAACAGTGCTACTCGTAGTTCACTTAGAGTCGATCAGTTAGTAAGCACATTTTCTGCTAATCCAAGCTTGATAGCTTTTGCAAAACTGTGTTGTCAGTCATGGAAGGACAGGCGCAATGGCAGTTTTGAAGAGTTCTGCTCTCAAATACTTTATGAATGTATGAGCAAGGATAGGCCAGCACTATTGCAGGTGTATATAAGTTTTTACACAATAATTGAGACAATGTGGGAGCATCTAAAGATTGGACATTTTCCTTTCTCTGATTCTCTTTTCCTTTCCAGCTTGAAGGTTGCATCAGCCTATAATGAAGCACTGATTGATGGTAGAATTACAACTGGAGGCATTATTCAGTCCACATTTTTGGAATCACTTATGAAGCGCATAGAGTACATCTTCGCAGAATTGCCGAACCTGCATGACAGCTTCATCAATTACCTGAACAAAGGCAAATGGCCTGATGCACAAAACGAAGCAGTGCTCCTTTCTTGGTATCTCCAGTGGTACAGCATCCCACCTCCCCATATTGTGTCATCCGCAATTGAAAAGGTGAAGCCCAGAACTCGGACCAGCTTGTCCATGCTCCCGCTTCTTCGGCTCCTGCTGCCAACCACACATCTCGTGGGGCTCATGGAGATTGAGAAGCTTCACATGACTCATGGTCACGAGGGCTTGACCTTGCACTGAAAATGCAAGAAACGTTTAGCAACGAGTGAGCCGATTGTGACTGGACTGAATAGTATCAGGGCTCATTGTTCTTATCTACTAGTAAGGATCATACCTAAGTGCTGGAATGCCAAGGCTTTGTGTGGAGGCCTCAATCATGTGATCCTACCTTGCAATGCTCATATTGCCATCTGATATTGTACCCTATGATCCTGTTGCATTTAGATGTAAGTGTCCATTTTGGCTTTAGAATAGGAATGACCGAATGAGTGAGCCTAGTTTGAGCCTTTGATAACTGCTACATTTGGGCTCAATGCAACATGGGTTCCCAGTGTATGCCGACCGGTTTCAATAAACTGGTGGTTACGAATTGAGCTATAATAGAGCACATTTTGTTTCAAAAAATTAAAAGGA]
[+] EMBL AK063429 [CAAGACCTGTGGCAATACAGACACCCAATAATCCTAGTGTGTCTGATCAGGATCTACAACAGCAACAACTATGGAACTTTGCACAAAGAACAACAGCTTTACCTTTTGGGCGTGGGGCTTTTACTTTAGCTACAACTTACACACTGTTAACAGAGGCTCTGGTTTTCCCAAAGCTTGTTTTGGCTGGTCGGTTGCCTGCACAACAGAATGCAACAGTTAATCTTGACCTAAGTACTAGAAGCGTCTCAGAATTCAAATCTTGGGCTGAGTTTCACAATGGTGTCGCTGCTGGGCTCAGGCTTGCTCCTTTTCAGGAGAAAATGTTAAGAACCTGGATACAATATAATAGACCTTCTGAACCAAATTTTACTCATGCTGGTCTGCTTCTTGCATTTGGTTTGCATGAACATCTACGAGTTTTAACTATGACCGACGCTTACCGATATCTCTCCCAGGAGCATGATATAACTAGACTTGGTTTGCTACTTGGTTTGGCTGCATCTAATAGGGGGACAATGCACCCGGCAATTTCAAAGATGCTCTATTTTCATGTCCCTTCCCGGCATCCATCTTCTACGCCAGAGTTGGAATTACCTACTCTTCTGCAGTCAGCAGCAGTGATGGGAATTGGACTTCTCTATGAAGGGTCAGCACATGCATTAACCATGAAAATTCTTCTGGGTGAGATTGGCCGAAGAAGTGGTGGTGATAATGTGCTAGAAAGAGAAGGCTATGCTGTTGCTGCAGGCTCTGCATTAGGACTTGTTGCATTAGGTCGTGGAAGCAATGCTTTCGGATTCATGGACACTTTCCTGGACCGGCTTTTTGAATACATTGGCAGTAAAGAAGTCTACCATGAAAAACACTTAAATGCAGCAATAGCTGCTGATGAGCAAAGTGGCAACACCGGACAGATGATGGAAGGAGCACAAATAAATGTTGATGTTACTGCACCTGGAGCAATAATTGCTCTAGCCTTGATATTTCTGAAAGCAGAGTCAGAAGAAATTGCAGCTAGACTCAGTGTTCCCAATAGTCACTTTGATCTGCAGTATGTGAGACCTGATTTTGTAATGCTTCGCATTGTAGCACGGAATTTAATATTGTGGAACAGAATACAACCTACCAAAGATTGGGTTGAGTCTCAAGTTCCTTCATTTGTCAACTTTGGTGTTTCCAATACGAGTCAAGAGGCTATGGACAGTGATGAATTGGATAGCGAAGCTCTGTTTCAAGCTTATGTTAATATTGTCACTGGAGCATGCATTGCACTTGGTCTCAAATATGCTGGCAGTAGAAATAGTGATGCCCAAGAACTACTCTACGCTTATGCCGTCCATTTTCTCAATGAGATCAAACACATATCTATTCAGACTGCAAGCATATTGCCAAAGGGATTGTTGCAGCATGTTGATCGTGGAACTCTTGAGCTCTGCTTGCATCTTATTGTTCTCTCTCTATCACTGGTAATGGCAGGATCTGGACATTTACAAACTTTCCGCTTACTGCGTTATCTGAGGGGAAGAAGTTCTGCAGAAGGACAAGTAAATTATGGACTGCAGATGGCTGTAAGCTTGGCTATAGGATTCTTATTCCTTGGAGGTGGTACACACACATTCTCAACTTCAAATAGTGCAGTTGCCGCATTACTCATCACCCTTTACCCACGTTTGCCTACTGGACCAAATGATAATCGCTGTCATCTCCAGGCATTCAGGCATCTGTATGTAATAGCTACAGAACCTCGATGGATTCAGACAGTAGATGTTGACACAGGACTTCCGGTGTATTGTCCTCTTGAAGTGACAGTTGCTGAAACGGAGTATTATGACGAGACTAATTACTGTGAAGTGACACCTTGTCTTCTGCCAGAGCGCTCAGTGCTGAAGAACATTCGAGTTTGTGGACCCAGATATTGGTCTCAGGTGATTACACTTACACCTGAAGATAAGCCATGGTGGAAATCTGGAGACAGGACTGACCCATTCAATGGTGGAGTACTCTATATAAAACGGAAAGTTGGATCTTGTTCCTACTCAGATGATCCAATTGGATGCCAATCTTTGCTTTCTCGAGCAATGCATGAGGTTTGTGATACACCATCCACGAGCTGCAGTAATCAGGCAAACAGTGCTACTCGTAGTTCACTTAGAGTCGATCAGTTAGTAAGCACATTTTCTGCTAATCCAAGCTTGATAGCTTTTGCAAAACTGTGTTGTCAGTCATGGAAGGACAGGCGCAATGGCAGTTTTGAAGAGTTCTGCTCTCAAATACTTTATGAATGTATGAGCAAGGATAGGCCAGCACTATTGCAGGTGTATATAAGTTTTTACACAATAATTGAGACAATGTGGGAGCATCTAAAGATTGGACATTTTCCTTTCTCTGATTCTCTTTTCCTTTCCAGCTTGAAGGTTGCATCAGCCTATAATGAAGCACTGATTGATGGTAGAATTACAACTGGAGGCATTATTCAGTCCACATTTTTGGAATCACTTATGAAGCGCATAGAGTACATCTTCGCAGAATTGCCGAACCTGCATGACAGCTTCATCAATTACCTGAACAAAGGCAAATGGCCTGATGCACAAAACGAAGCAGTGCTCCTTTCTTGGTATCTCCAGTGGTACAGCATCCCACCTCCCCATATTGTGTCATCCGCAATTGAAAAGGTGAAGCCCAGAACTCGGACCAGCTTGTCCATGCTCCCGCTTCTTCGGCTCCTGCTGCCAACCACACATCTCGTGGGGCTCATGGAGATTGAGAAGCTTCACATGACTCATGGTCACGAGGGCTTGACCTTGCACTGAAAATGCAAGAAACGTTTAGCAACGAGTGAGCCGATTGTGACTGGACTGAATAGTATCAGGGCTCATTGTTCTTATCTACTAGTAAGGATCATACCTAAGTGCTGGAATGCCAAGGCTTTGTGTGGAGGCCTCAATCATGTGATCCTACCTTGCAATGCTCATATTGCCATCTGATATTGTACCCTATGATCCTGTTGCATTTAGATGTAAGTGTCCATTTTGGCTTTAGAATAGGAATGACCGAATGAGTGAGCCTAGTTTGAGCCTTTGATAACTGCTACATTTGGGCTCAATGCAACATGGGTTCCCAGTGTATGCCGACCGGTTTCAATAAACTGGTGGTTACGAATTGAGCTATAATAGAGCACATTTTGT ]
[+] EMBL CB659825 [ GAGCATGATATAACTAGACTTGGTTTGCTACTTGGTTTGGCTGCATCTAATAGGGGGACAATGCACCCGGCAATTTCAAAGATGCTCTATTTTCATGTCCCTTCCCGGCATCCATCTTCTACGCCAGAGTTGGAATTACCTACTCTTCTGCAGTCAGCAGCAGTGATGGGAATTGGACTTCTCTATGAAGGGTCAGCACATGCATTAACCATGAAAATTCTTCTGGGTGAGATTGGCCGAAGAAGTGGTGGTGATAATGTGCTAGAAAGAGAAGGCTATGCTGTTGCTGCAGGCTCTGCATTAGGACTTGTTGCATTAGGTCGTGGAAGCAATGCTTTCGGATTCATGGACACTTTCCTGGACCGGCTTTTTGAATACATTGGCAGTAAAGAAGTCTACCATGAAAAACACTTAAATGCAGCAATAGCTGCTGATGAGCAAAGTGGCAACACCGGACAGATGATGGAAGGAGCACAAATAAATGTTGATGTTACTGCACCTGGAGCAATAATTGCTCTAGCCTTGATATTTCTGAAAGCAGAGTCAGAAGAAATTGCAGCTAGACTCAGTGTTCCCAATAGTCACTTTGATCTGCAGTATGTGAGACCTGATTTTGTAATGCTTCGCATTGTAGCACGGAATTTAATATTGTGGAACAGAATACAACCTACCAAAGATTGGGTTGAGTCTCAAGTTCCTTCATTTGTCAACTTTGGTGTTTCCAATACGAGTCAAGAGGCTATGGACAGTGATGAATTGGATAGCGAAGCTCTGTTTCAAGCTTATGTTAATATTGTCACTGGAGCATGCATTGCACTTGGTCTCAAATATGCTGGCAGTAGAAATAGTGATGCCCAAAAA ]
[+] EMBL CF323744 [ CCTACTCTTCTGCAGTCAGCAGCAGTGATGGGAATTGGACTTCTCTATGAAGGGTCAGCACATGCATTAACCATGAAAATTCTTCTGGGTGAGATTGGCCGAAGAAGTGGTGGTGATAATGTGCTAGAAAGAGAAGGCTATGCTGTTGCTGCAGGCTCTGCATTAGGACTTGTTGCATTAGGTCGTGGAAGCAATGCTTTCGGATTCATGGACACTTTCCTGGACCGGCTTTTTGAATACATTGGCAGTAAAGAAGTCTACCATGAAAAACACTTAAATGCAGCAATAGCTGCTGATGAGCAAAGTGGCAACACCGGACAGATGATGGAAGGAGCACAAATAAATGTTGATGTTACTGCACCTGGAGCAATAATTGCTCTAGCCTTGATATTTCTGAAAGCAGAGTCAGAAGAAATTGCAGCTAGACTCAGTGTTCCCAATAGTCACTTTGATCTGCAGTATGTGAGACCTGATTNTGTAATGCTTCGCATTGTAGCACGGAATTTAATATTGTGGAACAGAATAC ]
[+] EMBL CB633741 [ ATGCCGTCCATTTTCTCAATGAGATCAAACACATATCTATTCAGACTGCAAGCATATTGCCAAAGGGATTGTTGCAGCATGTTGATCGTGGAACTCTTGAGCTCTGCTTGCATCTTATTGTTCTCTCTCTATCACTGGTAATGGCAGGATCTGGACATTTACAAACTTTCCGCTTACTGCGTTATCTGAGGGGAAGAAGTTCTGCAGAAGGACAAGTAAATTATGGACTGCAGATGGCTGTAAGCTTGGCTATAGGATTCTTATTCCTTGGAGGTGGTACACACACATTCTCAACTTCAAATAGTGCAGTTGCCGCATTACTCATCACCCTTTACCCACGTTTGCCTACTGGACCAAATGATAATCGCTGTCATCTCCAGGCATTCAGGCATCTGTATGTAATAGCTACAGAACCTCGATGGATTCAGACAGTAGATGTTGACACAGGACTTCCGGTGTATTGTCCTCTTGAAGTGACAGTTGCTGAAACGGAGTATTATGACGAGACTAATTACTGTGAAGTGACACCTTGTCTTCTGCCAGAGCGCTCAGTGCTGAAGAACATTCGAGTTTGTGGACCCAGATATTGGTCTCAGGTGATTACACTTACACCTGAAGATAAGCCATGGTGGAAATCTGGAGACAGGACTGACCCATTCAATGGTGGAGTACTCTATATAAAACGGAAAGTTGGATCTTGTTCCTACTCAGATGATCCAATTGGATGCCAATCTTTGCTTTCTCGAGCAATGCATGAGGTTTGTGATACACCATCCACGAGCTGCAGTAATCAGGCAAA ]
[-] EMBL CB659826 [ TTTACACAATAATTGAGACAATGTGGGAGCATCTAAAGATTGGACATTTTCCTTTCTCTGATTCTCTTTTCCTTTCCAGCTTGAAGGTTGCATCAGCCTATAATGAAGCACTGATTGATGGTAGAATTACAACTGGAGGCATTATTCAGTCCACATTTTTGGAATCACTTATGAAGCGCATAGAGTACATCTTCGCAGAATTGCCGAACCTGCATGACAGCTTCATCAATTACCTGAACAAAGGCAAATGGCCTGATGCACAAAACGAAGCAGTGCTCCTTTCTTGGTATCTCCAGTGGTACAGCATCCCACCTCCCCATATTGTGTCATCCGCAATTGAAAAGGTGAAGCCCAGAACTCGGACCAGCTTGTCCATGCTCCCGCTTCTTCGGCTCCTGCTGCCAACCACACATCTCGTGGGGCTCATGGAGATTGAGAAGCTTCACATGACTCATGGTCACGAGGGCTTGACCTTGCACTGAAAATGCAAGAAACGTTTAGCAACGAGTGAGCCGATTGTGACTGGACTGAATAGTATCAGGGCTCATTGTTCTTATCTACTAGTAAGGATCATACCTAAGTGCTGGAATGCCAAGGCTTTGTGTGGAGGCCTCAATCATGTGATCCTACCTTGCAATGCTCATATTGCCATCTGATATTGTACCCTATGATCCTGTTGCATTTAGATGTAAGTGTCCATTTTGGCTTTAGAATAGGAATGACGGAATGAGTGAGCCTAGTTTGAGCCTTTGATAACTGCTACATTTGGGCTCAATGCAACATGGGTTCCCAAAGGATGCCGACCGGTTTC ]
[+] EMBL CA764659 [ AAGATTGGACATTTTCCTTTCTCTGATTCTCTTTTCCTTT CNGCTTGAAGGTTGCATCAGCCCATAATGAAGCACTGATTGATGGTAGAATTACAACTGGAGGCATTATTCAGTCCACATTTTTGGAATCACTTATGAAGCGCATAGAGTACATCTTCGCAGGATTGCCGAACCTGCATGACAGCTTCATCAATTACCTGAACAAAGGCAAATGGCCTGATGCACAAAACGAAGCAGTGCTCCTTTCTTGGTATCTCCAGTGGTACAGCATCCCACCTCCCCATATTGTGTCATCCGCAATTGAAAAGGTGAAGCCCAGAACTCGGACCAGCTTGTCCATGCTCCCGCTTCTTCGGCTCCAGCTGCCAACCACACATCTCGTGGGGCTCATGGAGATTGAGAAGCTTCACATGACTCATGGTCACGAGGGCTTGACCTTGCACTGAAAATGCAAGAAACGTTTAGCTACGAGTGAGCCGATTGTGACTGGACTGAATAGTATCAGGGCTCATTGNTCTTATCTACTAGTAAGGGTCATACCTAAGTGCTGGAATGCCAAGGCTTTGTGTGGAGGCCTCAATCATGTGATCCTACCTTGCAATGCTCATATTGNCATCTGATATTGNACCCTATGATCCTGGTGCATTTANATGGAAGNGNCCATTTTGGCTTTANAATAGGAATGACCGNATGGGTGAGCCTAGTTTGAGCCTTGGANAACTGGTA ]
[-] EMBL CB633742 [ CCTATAATGAAGCACTGATTGATGGTAGAATTACAACTGGAGGCATTATTCAGTCCACATTTTTGGAATCACTTATGAAGCGCATAGAGTACATCTTCGCAGGATTGCCGAACCTGCATGACAGCTTCATCAATTACCTGAACAAAGGCAAATGGCCTGATGCACAAAACGAAGCAGTGCTCCTTTCTTGGTATCTCCAGTGGTACAGCATCCCACCTCCCCATATTGTGTCATCCGCAATTGAAAAGGTGAAGCCCAGAACTCGGACCAGCTTGTCCATGCTCCCGCTTCTTCGGCTCCAGCTGCCAACCACACATCTCGTGGGGCTCATGGAGATTGAGAAGCTTCACATGACTCATGGTCACGAGGGCTTGACCTTGCACTGAAAATGCAAGAAACGTTTAGCAACGAGTGAGCCGATTGTGACTGGACTGAATAGTATCAGGGCTCATTGTTCTTATCTACTAGTAAGGATCATACCTAAGTGCTGGAATGCCAAGGCTTTGTGTGGAGGCCTCAATCATGTGATCCTACCTTGCAATGCTCATATTGCCATCTGATATTGTACCCTATGATCCTGTTGCATTTAGATGTAAGTGTCCATTTTGGCTTTAGAATAGGAATGACCGAATGAGTGAGCCTAGTTTGAGCCTTTGATAACTGGTACATTTGGGCTCAATGCAACATGGGTTCCCAGTGTATGCCGACCGGTTTCAATAAACTGGTGATTTTGAATGGAGCTATAATAGAGCACATTTTGTTTCAAAAAATTAAAAGGA]
[+] EMBL CA882836 [ CACCTCCCCATATTGTGCCATCCGCAATTGAAAAGGTGAAGCCCAGAACTCGGACCAGCTTGTCCATGCTCCCGCTTCTTCGGCTCCTGCTGCCAACCACACATCTCGTGGGGCTCATGGAGATTGAGAAGCTTCACATGACTCATGGTCACGAGGGCTTGACCTTGCACTGAAAATGCAAGAAACGTTTAGCAACGAGTGAGCCGATTGTGACTGGACTGAATAGTATCAGGGCTCATTGTTCTTATCTACTAGTAAGGATCATACCTAAGTGCTGGAATGCCAAGGCTTTGTGTGGAGGCCTCAATCATGTGATCCTACCTTGCAATGCTCATATTGCCAT ]
consensusID : consensus_11896#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 576 fasta sequence
[GGAAAAANAAATTCGTNANGGTTTTTTGGGGGGNGGAGTTNCNCNGAAGGAAAAAAAATTTTGGAGGCAGGGGNNNTAAGNTNGGNNATAGGGATTTTNNTTCCTTGGGNGNGGGANAAAANACTTTTTAAATTTCAAAATGGGCAGGTGCNGCATTAATTCTTTCACCNTTAACCCAAGTTTTGCCNTAATGGGACCAAAGGATAATCGCNGTCATTTTCCAGGCATTCAGGCATCNGTATGTAATAGNTACAGAACNTCGATGGATTCAGACAGTAGATGTTGACACAGGACTTCCGGTGTATTGTCCTCTTGAAGTGACAGTTGCTGAAACGGAGTATTATGACGAGACTAATTACTGTGAAGTGACACCTTGTCTTCTGCCAGAGCGCTCAGTGCTGAAGAACATTCGAGTTTGTGGACCCAGATATTGGTCTCAGGTGATTACACTTACACCTGAAGATAAGCCATGGTGGAAATCTGGAGACAGGACTGACCCATTCAATGGTGGAGTACTCTATATAAAACGGAAAGTTGGATCTTGTTCCTACTCAGATGATCCAATTGGATGCCAAT]
[-] EMBL AA753832 [GGAAAAANAAATTCGTNANGGTTTTTTGGGGGGNGGAGTTNCNCNGAAGGAAAAAAAATTTTGGAGGCAGGGGNNNTAAGNTNGGNNATAGGGATTTTNNTTCCTTGGGNGNGGGANAAAANACTTTTTAAATTTCAAAATGGGCAGGTGCNGCATTAATTCTTTCACCNTTAACCCAAGTTTTGCCNTAATGGGACCAAAGGATAATCGCNGTCATTTTCCAGGCATTCAGGCATCNGTATGTAATAGNTACAGAACNTCGATGGATTCAGACAGTAGATGTTGACACAGGACTTCCGGTGTATTGTCCTCTTGAAGTGACAGTTGCTGAAACGGAGTATTATGACGAGACTAATTACTGTGAAGTGACACCTTGTCTTCTGCCAGAGCGCTCAGTGCTGAAGAACATTCGAGTTTGTGGACCCAGATATTGGTCTCAGGTGATTACACTTACACCTGAAGATAAGCCATGGTGGAAATCTGGAGACAGGACTGACCCATTCAATGGTGGAGTACTCTATATAAAACGGAAAGTTGGATCTTGTTCCTACTCAGATGATCCAATTGGATGCCAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11896#0 CAAGACCTGTGGCAATACAGACACCCAATAATCCTAGTGTGTCTGATCAGGATCTACAAC 60
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 AGCAACAACTATGGAACTTTGCACAAAGAACAACAGCTTTACCTTTTGGGCGTGGGGCTT 120
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 TTACTTTAGCTACAACTTACACACTGTTAACAGAGGCTCTGGTTTTCCCAAAGCTTGTTT 180
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 TGGCTGGTCGGTTGCCTGCACAACAGAATGCAACAGTTAATCTTGACCTAAGTACTAGAA 240
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 GCGTCTCAGAATTCAAATCTTGGGCTGAGTTTCACAATGGTGTCGCTGCTGGGCTCAGGC 300
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 TTGCTCCTTTTCAGGAGAAAATGTTAAGAACCTGGATACAATATAATAGACCTTCTGAAC 360
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 CAAATTTTACTCATGCTGGTCTGCTTCTTGCATTTGGTTTGCATGAACATCTACGAGTTT 420
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 TAACTATGACCGACGCTTACCGATATCTCTCCCAGGAGCATGATATAACTAGACTTGGTT 480
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 TGCTACTTGGTTTGGCTGCATCTAATAGGGGGACAATGCACCCGGCAATTTCAAAGATGC 540
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 TCTATTTTCATGTCCCTTCCCGGCATCCATCTTCTACGCCAGAGTTGGAATTACCTACTC 600
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 TTCTGCAGTCAGCAGCAGTGATGGGAATTGGACTTCTCTATGAAGGGTCAGCACATGCAT 660
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 TAACCATGAAAATTCTTCTGGGTGAGATTGGCCGAAGAAGTGGTGGTGATAATGTGCTAG 720
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 AAAGAGAAGGCTATGCTGTTGCTGCAGGCTCTGCATTAGGACTTGTTGCATTAGGTCGTG 780
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 GAAGCAATGCTTTCGGATTCATGGACACTTTCCTGGACCGGCTTTTTGAATACATTGGCA 840
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 GTAAAGAAGTCTACCATGAAAAACACTTAAATGCAGCAATAGCTGCTGATGAGCAAAGTG 900
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 GCAACACCGGACAGATGATGGAAGGAGCACAAATAAATGTTGATGTTACTGCACCTGGAG 960
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 CAATAATTGCTCTAGCCTTGATATTTCTGAAAGCAGAGTCAGAAGAAATTGCAGCTAGAC 1020
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 TCAGTGTTCCCAATAGTCACTTTGATCTGCAGTATGTGAGACCTGATTTTGTAATGCTTC 1080
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 GCATTGTAGCACGGAATTTAATATTGTGGAACAGAATACAACCTACCAAAGATTGGGTTG 1140
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 AGTCTCAAGTTCCTTCATTTGTCAACTTTGGTGTTTCCAATACGAGTCAAGAGGCTATGG 1200
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 ACAGTGATGAATTGGATAGCGAAGCTCTGTTTCAAGCTTATGTTAATATTGTCACTGGAG 1260
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 CATGCATTGCACTTGGTCTCAAATATGCTGGCAGTAGAAATAGTGATGCCCAAGAACTAC 1320
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 TCTACGCTTATGCCGTCCATTTTCTCAATGAGATCAAACACATATCTATTCAGACTGCAA 1380
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 GCATATTGCCAAAGGGATTGTTGCAGCATGTTGATCGTGGAACTCTTGAGCTCTGCTTGC 1440
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 ATCTTATTGTTCTCTCTCTATCACTGGTAATGGCAGGATCTGGACATTTACAAACTTTCC 1500
consensus_11896#1 --------------------------------------------------GGAAAAANAA 10
**
consensus_11896#0 GCTTACTGCGTTATCTGAGGGGAAGAAGTTCTGCAGAAGGACAAGTAAATTATGGACTGC 1560
consensus_11896#1 ATTCGTNANGGTTTTTTGGGGGGNGGAGTTNCNCNGAAGGA-AAAAAAATTTTGGAG-GC 68
* * * * * **** * **** * ****** ** ***** **** **
consensus_11896#0 AGATGGCTGTAAGCTTGGCTATAGG-ATTCTTATTCCTTGGAGGTGGTACACA-CACATT 1618
consensus_11896#1 AGG-GGNNNTAAGNTNGGNNATAGGGATTTTNNTTCCTTGGGNGNGGGANAAAANACTTT 127
** ** **** * ** ***** *** * ******** * ** * * * ** **
consensus_11896#0 CTCAACTTCAAATAGTGCAGTTGCCGCATTACTCAT--CACCCTTTACCCACGTTT-GCC 1675
consensus_11896#1 TTAAATTTCAAAATGGGCAGGTGCNGCATTAATTCTTTCACCNTTAACCCAAGTTTTGCC 187
* ** ****** * **** *** ****** * * **** ** ***** **** ***
consensus_11896#0 T--ACTGGACCAAATGATAATCGCTGTCATCT-CCAGGCATTCAGGCATCTGTATGTAAT 1732
consensus_11896#1 NTAATGGGACCAAAGGATAATCGCNGTCATTTTCCAGGCATTCAGGCATCNGTATGTAAT 247
* ******** ********* ***** * ***************** *********
consensus_11896#0 AGCTACAGAACCTCGATGGATTCAGACAGTAGATGTTGACACAGGACTTCCGGTGTATTG 1792
consensus_11896#1 AGNTACAGAACNTCGATGGATTCAGACAGTAGATGTTGACACAGGACTTCCGGTGTATTG 307
** ******** ************************************************
consensus_11896#0 TCCTCTTGAAGTGACAGTTGCTGAAACGGAGTATTATGACGAGACTAATTACTGTGAAGT 1852
consensus_11896#1 TCCTCTTGAAGTGACAGTTGCTGAAACGGAGTATTATGACGAGACTAATTACTGTGAAGT 367
************************************************************
consensus_11896#0 GACACCTTGTCTTCTGCCAGAGCGCTCAGTGCTGAAGAACATTCGAGTTTGTGGACCCAG 1912
consensus_11896#1 GACACCTTGTCTTCTGCCAGAGCGCTCAGTGCTGAAGAACATTCGAGTTTGTGGACCCAG 427
************************************************************
consensus_11896#0 ATATTGGTCTCAGGTGATTACACTTACACCTGAAGATAAGCCATGGTGGAAATCTGGAGA 1972
consensus_11896#1 ATATTGGTCTCAGGTGATTACACTTACACCTGAAGATAAGCCATGGTGGAAATCTGGAGA 487
************************************************************
consensus_11896#0 CAGGACTGACCCATTCAATGGTGGAGTACTCTATATAAAACGGAAAGTTGGATCTTGTTC 2032
consensus_11896#1 CAGGACTGACCCATTCAATGGTGGAGTACTCTATATAAAACGGAAAGTTGGATCTTGTTC 547
************************************************************
consensus_11896#0 CTACTCAGATGATCCAATTGGATGCCAATCTTTGCTTTCTCGAGCAATGCATGAGGTTTG 2092
consensus_11896#1 CTACTCAGATGATCCAATTGGATGCCAAT------------------------------- 576
*****************************
consensus_11896#0 TGATACACCATCCACGAGCTGCAGTAATCAGGCAAACAGTGCTACTCGTAGTTCACTTAG 2152
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 AGTCGATCAGTTAGTAAGCACATTTTCTGCTAATCCAAGCTTGATAGCTTTTGCAAAACT 2212
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 GTGTTGTCAGTCATGGAAGGACAGGCGCAATGGCAGTTTTGAAGAGTTCTGCTCTCAAAT 2272
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 ACTTTATGAATGTATGAGCAAGGATAGGCCAGCACTATTGCAGGTGTATATAAGTTTTTA 2332
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 CACAATAATTGAGACAATGTGGGAGCATCTAAAGATTGGACATTTTCCTTTCTCTGATTC 2392
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 TCTTTTCCTTTCCAGCTTGAAGGTTGCATCAGCCTATAATGAAGCACTGATTGATGGTAG 2452
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 AATTACAACTGGAGGCATTATTCAGTCCACATTTTTGGAATCACTTATGAAGCGCATAGA 2512
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 GTACATCTTCGCAGAATTGCCGAACCTGCATGACAGCTTCATCAATTACCTGAACAAAGG 2572
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 CAAATGGCCTGATGCACAAAACGAAGCAGTGCTCCTTTCTTGGTATCTCCAGTGGTACAG 2632
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 CATCCCACCTCCCCATATTGTGTCATCCGCAATTGAAAAGGTGAAGCCCAGAACTCGGAC 2692
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 CAGCTTGTCCATGCTCCCGCTTCTTCGGCTCCTGCTGCCAACCACACATCTCGTGGGGCT 2752
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 CATGGAGATTGAGAAGCTTCACATGACTCATGGTCACGAGGGCTTGACCTTGCACTGAAA 2812
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 ATGCAAGAAACGTTTAGCAACGAGTGAGCCGATTGTGACTGGACTGAATAGTATCAGGGC 2872
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 TCATTGTTCTTATCTACTAGTAAGGATCATACCTAAGTGCTGGAATGCCAAGGCTTTGTG 2932
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 TGGAGGCCTCAATCATGTGATCCTACCTTGCAATGCTCATATTGCCATCTGATATTGTAC 2992
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 CCTATGATCCTGTTGCATTTAGATGTAAGTGTCCATTTTGGCTTTAGAATAGGAATGACC 3052
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 GAATGAGTGAGCCTAGTTTGAGCCTTTGATAACTGCTACATTTGGGCTCAATGCAACATG 3112
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 GGTTCCCAGTGTATGCCGACCGGTTTCAATAAACTGGTGGTTACGAATTGAGCTATAATA 3172
consensus_11896#1 ------------------------------------------------------------
consensus_11896#0 GAGCACATTTTGTTTCAAAAAATTAAAAGGA 3203
consensus_11896#1 -------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||