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Oryza sativa
cluster # 11904 cluster # 11904       Sequences # 9       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11904#0 length = 2572 sequences # 2  
 consensus_11904#1 length = 2246 sequences # 6  
consensus_11904#2 length = 465 sequences # 1  
consensusID : consensus_11904#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2572
fasta sequence 
                              [CTTCTCCTCCCTCACGCTCTCTCCCAGGCCGCGCCATCAACGCCGCCGCGCTCCCCCGCTCCGGTCGCCGGACTCCAACTCCGGTAACCCTCCAGTACCCGCTGCCGCCGCGAATCGGTTCCCCTGGCTCCCACGAGCCTGCTCCTGCTAACCCTAGCCATCCGCCTCCTGCTGCTGCAGCCCCCATGGAGATGGCCGGTGGAAAACACAGCACAACTGGTGGCTGCACCCTATCCCCATTGATACTCCCCCTGGACTCCGGTTCAAGGATTCTCCTATTGGAACTCTAGCTTCTCCCCTTGCAGTTGATGTACCAACTCAGCTCCTCCTCCTGGAGCTGAAACCCCTCTCCTCTTGAAGCTCAGGTACGCCGCTGTGTCAGCAGGATGCCACGCAAGGTTGTCTCTGGGCCTGACTACGATGACGAGTACGACGATGACTATGATGAGTATGATGAGGACTACGATGATTACGGTGAGACCGGGCACAGTGACGACATTCAGCACCCCGTGAAGGAGGAGAAAGAGTCATCGAAGAAGTCCTCAAGTACGGTGCCTGTGCTTTGGAGATGCTCCATGTGCATGTTCGATAATCATGAAAGCATGGTGTATTGTGAGATGTGTGGGGTTTTTCGAGAATCCTTTATGAAATCTGCCAAGGATGGTTCAATAAAAGTCCATGGGATACCAAGTGATTTTGGGACACCTTCGATGCCGAAATCTGACTGTACCAAGATGCCAGTGAATACTCGTACTACAGACTTTGATGGTGACCCTGAGATAAAGAATGCTAGCATATCTCATGAGAAAGTTGGTTCCACGCAGTACACATCTGCTGGTAGCTCATCAGGCGCTGGGAAAAAGCTGAAGGAGGACCAGAGTAGTAGGGCTAGCAGTTCTGCGCAGAATGAGGATGTGGCCCAGAAACTTTCTTCTGACATACAGAAGCTAGGTTTAGAAAAGAATGAAGTAGATACTGCAAAACCTTATTTACCTGAAGAATATAAGCCTGAGAAGTGGATGTTCGCTAATGAGGAATCAGGAGTGCTGAGCCAACTAAACCTTGCAATAGTAGGTCATGTTGATTCTGGCAAGTCAACACTCTCTGGGAGACTGCTACATCTGTTAGGAAGGATATCGAAAAAAGATATGCACAAGAATGAGAAGGAGGCTAAAGAAAAAGGAAAAGGATCATTTGCTTATGCGTGGGCTATGGATGAAAGCAGTGAAGAAAGAGAAAGAGGCGTGACAATGACTGTGGCCGTGGCTTATTTGGAGACTAAGAAGTACCGTGTAGTTTTGCTTGACTCTCCAGGCCATAAAGATTTTGTACCAAATATGATATCTGGCGCAACGCAAGCTGATGCAGCTATTCTTGTTGTTGATGCTTGCACTGGTTCATTTGAAGCTGGCATGGACGGTGAAGGAGGGAAAAGTGTTGGCCAGACAAAAGAACATGCTCAGCTTATTAGAAGCTTCGGCGTTGAACAGCTTATTGTTGCGGTCAACAAGATGGATGCCATCGGCTACTCGAAAGAAAGATTTGAGTTCATCAAGGTTCAACTTGGTAGTTTTCTGCGGTCATGCAATTTCAAAGATTCATCTGTTACCTGGATTCCTCTTAGTGCTGTTGAAAATCAGAATTTGATCAAAATTCCTTCTGATGTCCGTTTAACTTCCTGGTATCAAGGATTTTGTCTCTTGGATGCTATAGATTCCTTGCAGCTTCCATCTCGGGATGTTTCAAAGCCCCTCATTCTTCCTATCTGTGATGTTATCAAGTCTCAGTCAACAGGGCAGTTTGCAGCCTTTGGAAAATTAGAGACTGGAGCTATTCGAATTGGTTCAAAGGTTTTAATTTCACCTTGTGGGGAAGTGGCGGCAGTGAAATCCATCGAGCGGGATTCAAATTCATGTGACATAGCAAGAGCTGGTGATAATGTAGCGGTTAGTTTACAGGGTATCGATGGGAGTAAGCTAATACTAGGTGGGATTCTTTGCAACCCTGGTTTCCCAGTGCCTGTCTCTAACTTCTTGGAGCTAAGGGTTCTAGTGTTAGACGTCACCATTCCTATCCTTATTGGCTATCAGGTCGAATTTCACATACATCATGTGAAGGAGGCTGCGAGGGTTACGAAAATCGTGGCATTGCTTGACAAGGCTGGCAAACCAAGCAAAACTGCACCTCGTTTTCTTAAGTCAAAGCAGAATGCAGTTGTGCAGGTTACCTTAGACGCTCCGGTCTGTGTTCAAGAATTCTCCAAATGCCGAGCTCTTGGCAGGGCATTCTTAAGGTCTTCTGGAAGCACGATCGCTGTTGGAGTCGTAACGCGGGTACTCCGGCAAGATCAGAACTGAAAGACCTCCGCCCAACATCTGAAAATTTGAACGTATCTGCAGCCGTGCTTTGGGGCCCATATTGTAGCTGACTCAAAACGGTACTGTAGTATTGTCGATCAGAAGTTTGGCGACGGCATTTTTCACTGTGTGGTCGTCGCCATTTCCATCGTGCATTTCAGAATTTGCGTTGAGATATGGCCTGTAAAATAGTCACTTTCACGAGTTCTAACCCC]

[+] EMBL CF296646             [CTTCTCCTCCCTCACGCTCTCTCCCAGGCCGCGCCATCAACGCCGCCGCGCTCCCCCGCTCCGGTCGCCGGACTCCAACTCCGGTAACCCTCCAGTACCCGCTGCCGCCGCGAATCGGTTCCCCTGGCTCCCACGAGCCTGCTCCTGCTAACCCTAGCCATCCGCCTCCTGCTGCTGCAGCCCCCATGGAGATGGCCGGTGGAAAACACAGCACAACTGGTGGCTGCACCCTATCCCCATTGATACTCCCCCTGGACTCCGGTTCAAGGATTCTCCTATTGGAACTCTAGCTTCTCCCCTTGCAGTTGATGTACCAACTCAGCTCCTCCTCCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK100658             [   CTCCTCCCTCACGCTCTCTCCCAGGCCGCGCCATCAACGCCGCCGCGCTCCCCCGCTCCGGTCGCCGGACTCCAACTCCGGTAACCCTCCAGTACCCGCTGCCGCCGCGAATCGGTTCCCCTGGCTCCCACGAGCCTGCTCCTGCTAACCCTAGCCATCCGCCTCCTGCTGCTGCAGCCCCCATGGAGATGGCCGGTGGAAAACACAGCACAACTGGTGGCTGCACCCTATCCCCATTGATACTCCCCCTGGACTCCGGTTCAAGGATTCTCCTATTGGAACTCTAGCTTCTCCCCTTGCAGTTGATGTACCAACTCAGCTCCTCCTCCTGGAGCTGAAACCCCTCTCCTCTTGAAGCTCAGGTACGCCGCTGTGTCAGCAGGATGCCACGCAAGGTTGTCTCTGGGCCTGACTACGATGACGAGTACGACGATGACTATGATGAGTATGATGAGGACTACGATGATTACGGTGAGACCGGGCACAGTGACGACATTCAGCACCCCGTGAAGGAGGAGAAAGAGTCATCGAAGAAGTCCTCAAGTACGGTGCCTGTGCTTTGGAGATGCTCCATGTGCATGTTCGATAATCATGAAAGCATGGTGTATTGTGAGATGTGTGGGGTTTTTCGAGAATCCTTTATGAAATCTGCCAAGGATGGTTCAATAAAAGTCCATGGGATACCAAGTGATTTTGGGACACCTTCGATGCCGAAATCTGACTGTACCAAGATGCCAGTGAATACTCGTACTACAGACTTTGATGGTGACCCTGAGATAAAGAATGCTAGCATATCTCATGAGAAAGTTGGTTCCACGCAGTACACATCTGCTGGTAGCTCATCAGGCGCTGGGAAAAAGCTGAAGGAGGACCAGAGTAGTAGGGCTAGCAGTTCTGCGCAGAATGAGGATGTGGCCCAGAAACTTTCTTCTGACATACAGAAGCTAGGTTTAGAAAAGAATGAAGTAGATACTGCAAAACCTTATTTACCTGAAGAATATAAGCCTGAGAAGTGGATGTTCGCTAATGAGGAATCAGGAGTGCTGAGCCAACTAAACCTTGCAATAGTAGGTCATGTTGATTCTGGCAAGTCAACACTCTCTGGGAGACTGCTACATCTGTTAGGAAGGATATCGAAAAAAGATATGCACAAGAATGAGAAGGAGGCTAAAGAAAAAGGAAAAGGATCATTTGCTTATGCGTGGGCTATGGATGAAAGCAGTGAAGAAAGAGAAAGAGGCGTGACAATGACTGTGGCCGTGGCTTATTTGGAGACTAAGAAGTACCGTGTAGTTTTGCTTGACTCTCCAGGCCATAAAGATTTTGTACCAAATATGATATCTGGCGCAACGCAAGCTGATGCAGCTATTCTTGTTGTTGATGCTTGCACTGGTTCATTTGAAGCTGGCATGGACGGTGAAGGAGGGAAAAGTGTTGGCCAGACAAAAGAACATGCTCAGCTTATTAGAAGCTTCGGCGTTGAACAGCTTATTGTTGCGGTCAACAAGATGGATGCCATCGGCTACTCGAAAGAAAGATTTGAGTTCATCAAGGTTCAACTTGGTAGTTTTCTGCGGTCATGCAATTTCAAAGATTCATCTGTTACCTGGATTCCTCTTAGTGCTGTTGAAAATCAGAATTTGATCAAAATTCCTTCTGATGTCCGTTTAACTTCCTGGTATCAAGGATTTTGTCTCTTGGATGCTATAGATTCCTTGCAGCTTCCATCTCGGGATGTTTCAAAGCCCCTCATTCTTCCTATCTGTGATGTTATCAAGTCTCAGTCAACAGGGCAGTTTGCAGCCTTTGGAAAATTAGAGACTGGAGCTATTCGAATTGGTTCAAAGGTTTTAATTTCACCTTGTGGGGAAGTGGCGGCAGTGAAATCCATCGAGCGGGATTCAAATTCATGTGACATAGCAAGAGCTGGTGATAATGTAGCGGTTAGTTTACAGGGTATCGATGGGAGTAAGCTAATACTAGGTGGGATTCTTTGCAACCCTGGTTTCCCAGTGCCTGTCTCTAACTTCTTGGAGCTAAGGGTTCTAGTGTTAGACGTCACCATTCCTATCCTTATTGGCTATCAGGTCGAATTTCACATACATCATGTGAAGGAGGCTGCGAGGGTTACGAAAATCGTGGCATTGCTTGACAAGGCTGGCAAACCAAGCAAAACTGCACCTCGTTTTCTTAAGTCAAAGCAGAATGCAGTTGTGCAGGTTACCTTAGACGCTCCGGTCTGTGTTCAAGAATTCTCCAAATGCCGAGCTCTTGGCAGGGCATTCTTAAGGTCTTCTGGAAGCACGATCGCTGTTGGAGTCGTAACGCGGGTACTCCGGCAAGATCAGAACTGAAAGACCTCCGCCCAACATCTGAAAATTTGAACGTATCTGCAGCCGTGCTTTGGGGCCCATATTGTAGCTGACTCAAAACGGTACTGTAGTATTGTCGATCAGAAGTTTGGCGACGGCATTTTTCACTGTGTGGTCGTCGCCATTTCCATCGTGCATTTCAGAATTTGCGTTGAGATATGGCCTGTAAAATAGTCACTTTCACGAGTTCTAACCCC]




>consensus_11904#0
CTTCTCCTCCCTCACGCTCTCTCCCAGGCCGCGCCATCAACGCCGCCGCGCTCCCCCGCT
CCGGTCGCCGGACTCCAACTCCGGTAACCCTCCAGTACCCGCTGCCGCCGCGAATCGGTT
CCCCTGGCTCCCACGAGCCTGCTCCTGCTAACCCTAGCCATCCGCCTCCTGCTGCTGCAG
CCCCCATGGAGATGGCCGGTGGAAAACACAGCACAACTGGTGGCTGCACCCTATCCCCAT
TGATACTCCCCCTGGACTCCGGTTCAAGGATTCTCCTATTGGAACTCTAGCTTCTCCCCT
TGCAGTTGATGTACCAACTCAGCTCCTCCTCCTGGAGCTGAAACCCCTCTCCTCTTGAAG
CTCAGGTACGCCGCTGTGTCAGCAGGATGCCACGCAAGGTTGTCTCTGGGCCTGACTACG
ATGACGAGTACGACGATGACTATGATGAGTATGATGAGGACTACGATGATTACGGTGAGA
CCGGGCACAGTGACGACATTCAGCACCCCGTGAAGGAGGAGAAAGAGTCATCGAAGAAGT
CCTCAAGTACGGTGCCTGTGCTTTGGAGATGCTCCATGTGCATGTTCGATAATCATGAAA
GCATGGTGTATTGTGAGATGTGTGGGGTTTTTCGAGAATCCTTTATGAAATCTGCCAAGG
ATGGTTCAATAAAAGTCCATGGGATACCAAGTGATTTTGGGACACCTTCGATGCCGAAAT
CTGACTGTACCAAGATGCCAGTGAATACTCGTACTACAGACTTTGATGGTGACCCTGAGA
TAAAGAATGCTAGCATATCTCATGAGAAAGTTGGTTCCACGCAGTACACATCTGCTGGTA
GCTCATCAGGCGCTGGGAAAAAGCTGAAGGAGGACCAGAGTAGTAGGGCTAGCAGTTCTG
CGCAGAATGAGGATGTGGCCCAGAAACTTTCTTCTGACATACAGAAGCTAGGTTTAGAAA
AGAATGAAGTAGATACTGCAAAACCTTATTTACCTGAAGAATATAAGCCTGAGAAGTGGA
TGTTCGCTAATGAGGAATCAGGAGTGCTGAGCCAACTAAACCTTGCAATAGTAGGTCATG
TTGATTCTGGCAAGTCAACACTCTCTGGGAGACTGCTACATCTGTTAGGAAGGATATCGA
AAAAAGATATGCACAAGAATGAGAAGGAGGCTAAAGAAAAAGGAAAAGGATCATTTGCTT
ATGCGTGGGCTATGGATGAAAGCAGTGAAGAAAGAGAAAGAGGCGTGACAATGACTGTGG
CCGTGGCTTATTTGGAGACTAAGAAGTACCGTGTAGTTTTGCTTGACTCTCCAGGCCATA
AAGATTTTGTACCAAATATGATATCTGGCGCAACGCAAGCTGATGCAGCTATTCTTGTTG
TTGATGCTTGCACTGGTTCATTTGAAGCTGGCATGGACGGTGAAGGAGGGAAAAGTGTTG
GCCAGACAAAAGAACATGCTCAGCTTATTAGAAGCTTCGGCGTTGAACAGCTTATTGTTG
CGGTCAACAAGATGGATGCCATCGGCTACTCGAAAGAAAGATTTGAGTTCATCAAGGTTC
AACTTGGTAGTTTTCTGCGGTCATGCAATTTCAAAGATTCATCTGTTACCTGGATTCCTC
TTAGTGCTGTTGAAAATCAGAATTTGATCAAAATTCCTTCTGATGTCCGTTTAACTTCCT
GGTATCAAGGATTTTGTCTCTTGGATGCTATAGATTCCTTGCAGCTTCCATCTCGGGATG
TTTCAAAGCCCCTCATTCTTCCTATCTGTGATGTTATCAAGTCTCAGTCAACAGGGCAGT
TTGCAGCCTTTGGAAAATTAGAGACTGGAGCTATTCGAATTGGTTCAAAGGTTTTAATTT
CACCTTGTGGGGAAGTGGCGGCAGTGAAATCCATCGAGCGGGATTCAAATTCATGTGACA
TAGCAAGAGCTGGTGATAATGTAGCGGTTAGTTTACAGGGTATCGATGGGAGTAAGCTAA
TACTAGGTGGGATTCTTTGCAACCCTGGTTTCCCAGTGCCTGTCTCTAACTTCTTGGAGC
TAAGGGTTCTAGTGTTAGACGTCACCATTCCTATCCTTATTGGCTATCAGGTCGAATTTC
ACATACATCATGTGAAGGAGGCTGCGAGGGTTACGAAAATCGTGGCATTGCTTGACAAGG
CTGGCAAACCAAGCAAAACTGCACCTCGTTTTCTTAAGTCAAAGCAGAATGCAGTTGTGC
AGGTTACCTTAGACGCTCCGGTCTGTGTTCAAGAATTCTCCAAATGCCGAGCTCTTGGCA
GGGCATTCTTAAGGTCTTCTGGAAGCACGATCGCTGTTGGAGTCGTAACGCGGGTACTCC
GGCAAGATCAGAACTGAAAGACCTCCGCCCAACATCTGAAAATTTGAACGTATCTGCAGC
CGTGCTTTGGGGCCCATATTGTAGCTGACTCAAAACGGTACTGTAGTATTGTCGATCAGA
AGTTTGGCGACGGCATTTTTCACTGTGTGGTCGTCGCCATTTCCATCGTGCATTTCAGAA
TTTGCGTTGAGATATGGCCTGTAAAATAGTCACTTTCACGAGTTCTAACCCC

consensusID : consensus_11904#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2246
fasta sequence 
                              [ATAACACTATTTTTTCCCCCATTAGGTCTGCCCTGTGTCAGCAGGATGCCGCGCAAGGTTGTCTCTGGGCCTGACTACGATGATGAGTACAATGATGACTATGATGAGTATGATGAAGACTATGATGATTACGGTGGGACTGGGCACAGTGACGACATTCAGCACCCTACGAAGGAGAAAGAGTCATCGAAGAAGTCCTCAAGTATGGTGCCTGTGCTTTGGAGATGCTCCATGTGCATGTTCGATAATCATGAAAGCATGGTGTATTGTGAGATGTGTGGGGTTTTTCGAGAATCCTTTATGAAATCTGCCAAGGATGGTTCAATAAAAGTCCATGGGATACCAAGTGATTTTGGGACACCTTCGATGCCGAAATCTGATTCTACAAAGATGCCAGTGAATACTCGTACTACAGACTTTGGTGGTGACCCTGAGATAAAGAATGCTAGCATATCTCATGAGAAAGTTGGTTCCACACAGTACGCATCTGTTGGTAGCTCATCAGGCGCTGGGAAAAAGCTGAAGGAGGACCAGAGTAGTAGGGCTACCAGTTCTGCACAGAATGAGGATGTGGCCCAGAAACTTTCTTCTGACATACAGAAGCTAGGTTTAGAAAAGAATGAAGTAGATACTGCAAAACCTTATTTACCTGAAGAATATAAGCCTGAGAAGTGGATGTTTGCTAATGAGGAATCAGGAGTGCTGAGCCAACTAAACCTTGCAATAGTAGGTCATGTTGATTCTGGCAAGTCAACACTCTCTGGGAGACTGCTACATCTGTTAGGAAGGATATCGAAAAAAGATATGCACAAGAATGAGAAGGAGGCTAAAGAAAAAGGAAAAGGATCATTTGCTTATGCGTGGGCTATGGATGAAAGCAGTGAAGAAAGAGAAAGAGGTGTGACAATGACTGTGGCTGTGGCTTATTTGGAGACCAATAAGTACCGTGTAGTTTTGCTTGACTCTCCAGGCCATAAAGATTTTGTACCAAATATGATATCTGGCGCAACGCAAGCTGATGCAGCTATTCTTGTTGTTGATGCTTGCACTGGTTCATTTGAAGCTGGCATGGACGGTGAAGGAGGGAAAAGTGTTGGCCAGACAAAAGAACATGCTCAGCTTATTAGAAGCTTCGGCGTTGAACAGCTTATTGTTGCGGTCAACAAGATGGATGCCATCGGGTACTCCAAAGAAAGATTCGAGTTCATCAAGGTTCAACTTGGTAGTTTTCTGCGGGCATGCAACTTCAAAGATTCATCTGTTACCTGGATTCCTCTTAGTGCTGTTGAAAATCAGAATTTGATCAAAATTCCTTCTGATGTCCGTTTAACTTCCTGGTATCAAGGATTTTGTCTCTTGGATGCTATAGATTCCTTGCAGCTTCCATCTCGGGATGTTTCAAAGCCCCTCATTCTTCCTATCTGTGATGTTATCAAGTCTCAGTCAACAGGGCAGTTGGCAGCATTTGGAAAATTAGAGACTGGAGCTATTCGAATTGGTTCAAAGGTTTTAATTTCACCTTGTGGGGAAGTGGCGACAGTGAAATCCATCGAGCGGGATTCAAATTCATGTGACATAGCAAGAGCTGGTGATAATGTAGCGGTTAGTTTACAGGGCATCGATGGGAGTAAGCTAATAGCAGGTGGGATTCTTTGCAACCCTGGTTTCCCAGTGCCTGTCTCTAACTTCTTGGAGCTAAGGGTTCTAGTGTTGGACGTCACCATTCCTATCCTTATTGGCTATC-AGGTCGAGTT-TCACA-TACATCATGTGAAGGAGGCTGCGAGGGTTACGAAAATCGTGGCATTGCTTGA-CAAGGCTG-GCAAACCAAG-CAAAACTGCACCTCGATTTCTTAAGTCAAAGCAGAATG-CA-GTTGTG-CAGGTTACCTTAGACGCTCCGGTCTGTGTTGAAGAATTCTCCAAATGCCGAGCTCTTGG-CA-GGGCATTCTTAAGGTCTGGTGGAAGCACAATCGCTGTTGGAGTCGTAACGCGGGTACTCGGGCAAGATCAGAACTGAAAGACCTCCGCCCAACATCTGAAAATTTGAACGTATCTGCAGCCGTGCCCTGCTTTGGGGTCCATAATATTGTAGTTGACTCAAAACGGTATTGCCGATGAGAAGAAGTTTGGCGACGGCATTTTTCACTGTGTGTTCGTCGCCATTTCAGAATTTAATCCGTCACTCTTTTAGTTATTTGTAATTTTCTTATGCCTAATGAAAAAGGGGGTTTGANCNTTCCAAAAAAAAAA]

[+] EMBL AK073254             [ATAACACTATTTTTTCCCCCATTAGGTCTGCCCTGTGTCAGCAGGATGCCGCGCAAGGTTGTCTCTGGGCCTGACTACGATGATGAGTACAATGATGACTATGATGAGTATGATGAAGACTATGATGATTACGGTGGGACTGGGCACAGTGACGACATTCAGCACCCTACGAAGGAGAAAGAGTCATCGAAGAAGTCCTCAAGTATGGTGCCTGTGCTTTGGAGATGCTCCATGTGCATGTTCGATAATCATGAAAGCATGGTGTATTGTGAGATGTGTGGGGTTTTTCGAGAATCCTTTATGAAATCTGCCAAGGATGGTTCAATAAAAGTCCATGGGATACCAAGTGATTTTGGGACACCTTCGATGCCGAAATCTGATTCTACAAAGATGCCAGTGAATACTCGTACTACAGACTTTGGTGGTGACCCTGAGATAAAGAATGCTAGCATATCTCATGAGAAAGTTGGTTCCACACAGTACGCATCTGTTGGTAGCTCATCAGGCGCTGGGAAAAAGCTGAAGGAGGACCAGAGTAGTAGGGCTACCAGTTCTGCACAGAATGAGGATGTGGCCCAGAAACTTTCTTCTGACATACAGAAGCTAGGTTTAGAAAAGAATGAAGTAGATACTGCAAAACCTTATTTACCTGAAGAATATAAGCCTGAGAAGTGGATGTTTGCTAATGAGGAATCAGGAGTGCTGAGCCAACTAAACCTTGCAATAGTAGGTCATGTTGATTCTGGCAAGTCAACACTCTCTGGGAGACTGCTACATCTGTTAGGAAGGATATCGAAAAAAGATATGCACAAGAATGAGAAGGAGGCTAAAGAAAAAGGAAAAGGATCATTTGCTTATGCGTGGGCTATGGATGAAAGCAGTGAAGAAAGAGAAAGAGGTGTGACAATGACTGTGGCTGTGGCTTATTTGGAGACCAATAAGTACCGTGTAGTTTTGCTTGACTCTCCAGGCCATAAAGATTTTGTACCAAATATGATATCTGGCGCAACGCAAGCTGATGCAGCTATTCTTGTTGTTGATGCTTGCACTGGTTCATTTGAAGCTGGCATGGACGGTGAAGGAGGGAAAAGTGTTGGCCAGACAAAAGAACATGCTCAGCTTATTAGAAGCTTCGGCGTTGAACAGCTTATTGTTGCGGTCAACAAGATGGATGCCATCGGGTACTCCAAAGAAAGATTCGAGTTCATCAAGGTTCAACTTGGTAGTTTTCTGCGGGCATGCAACTTCAAAGATTCATCTGTTACCTGGATTCCTCTTAGTGCTGTTGAAAATCAGAATTTGATCAAAATTCCTTCTGATGTCCGTTTAACTTCCTGGTATCAAGGATTTTGTCTCTTGGATGCTATAGATTCCTTGCAGCTTCCATCTCGGGATGTTTCAAAGCCCCTCATTCTTCCTATCTGTGATGTTATCAAGTCTCAGTCAACAGGGCAGTTGGCAGCATTTGGAAAATTAGAGACTGGAGCTATTCGAATTGGTTCAAAGGTTTTAATTTCACCTTGTGGGGAAGTGGCGACAGTGAAATCCATCGAGCGGGATTCAAATTCATGTGACATAGCAAGAGCTGGTGATAATGTAGCGGTTAGTTTACAGGGCATCGATGGGAGTAAGCTAATAGCAGGTGGGATTCTTTGCAACCCTGGTTTCCCAGTGCCTGTCTCTAACTTCTTGGAGCTAAGGGTTCTAGTGTTGGACGTCACCATTCCTATCCTTATTGGCTATC AGGTCGAGTT TCACA TACATCATGTGAAGGAGGCTGCGAGGGTTACGAAAATCGTGGCATTGCTTGA CAAGGCTG GCAAACCAAG CAAAACTGCACCTCGATTTCTTAAGTCAAAGCAGAATG CA GTTGTG CAGGTTACCTTAGACGCTCCGGTCTGTGTTGAAGAATTCTCCAAATGCCGAGCTCTTGG CA GGGCATTCTTAAGGTCTGGTGGAAGCACAATCGCTGTTGGAGTCGTAACGCGGGTACTCGGACAAGATCAGAACTGAAAGACCTCCGCCCAACATCTGAAAATTTGAACGTATCTGCAGCCGTGCCCTGCTTTGGGGTCCATAATATTGTAGTTGACTCAAAACGGTATTGCCGATGAGAAGAAGTTTGGCGACGGCATTTTTCACTGTGTGTTCGTCGCCATTTCAGAATTTAATCCGTCACTCTTTTAGTTATTTGTAATTTTCTTATGCCTAATGAAAAAGGGGGTT                    ]
[+] EMBL AK121811             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGCAAAACCTTATTTACCTGAAGAATATAAGCCTGAGAAGTGGATGTTTGCTAATGAGGAATCAGGAGTGCTGAGCCAACTAAACCTTGCAATAGTAGGTCATGTTGATTCTGGCAAGTCAACACTCTCTGGGAGACTGCTACATCTGTTAGGAAGGATATCGAAAAAAGATATGCACAAGAATGAGAAGGAGGCTAAAGAAAAAGGAAAAGGATCATTTGCTTATGCGTGGGCTATGGATGAAAGCAGTGAAGAAAGAGAAAGAGGTGTGACAATGACTGTGGCTGTGGCTTATTTGGAGACCAATAAGTACCGTGTAGTTTTGCTTGACTCTCCAGGCCATAAAGATTTTGTACCAAATATGATATCTGGCGCAACGCAAGCTGATGCAGCTATTCTTGTTGTTGATGCTTGCACTGGTTCATTTGAAGCTGGCATGGACGGTGAAGGAGGGAAAAGTGTTGGCCAGACAAAAGAACATGCTCAGCTTATTAGAAGCTTCGGCGTTGAACAGCTTATTGTTGCGGTCAACAAGATGGATGCCATCGGGTACTCCAAAGAAAGATTCGAGTTCATCAAGGTTCAACTTGGTAGTTTTCTGCGGGCATGCAACTTCAAAGATTCATCTGTTACCTGGATTCCTCTTAGTGCTGTTGAAAATCAGAATTTGATCAAAATTCCTTCTGATGTCCGTTTAACTTCCTGGTATCAAGGATTTTGTCTCTTGGATGCTATAGATTCCTTGCAGCTTCCATCTCGGGATGTTTCAAAGCCCCTCATTCTTCCTATCTGTGATGTTATCAAGTCTCAGTCAACAGGGCAGTTGGCAGCATTTGGAAAATTAGAGACTGGAGCTATTCGAATTGGTTCAAAGGTTTTAATTTCACCTTGTGGGGAAGTGGCGACAGTGAAATCCATCGAGCGGGATTCAAATTCATGTGACATAGCAAGAGCTGGTGATAATGTAGCGGTTAGTTTACAGGGCATCGATGGGAGTAAGCTAATAGCAGGTGGGATTCTTTGCAACCCTGGTTTCCCAGTGCCTGTCTCTAACTTCTTGGAGCTAAGGGTTCTAGTGTTGGACGTCACCATTCCTATCCTTATTGGCTATC AGGTCGAGTT TCACA TACATCATGTGAAGGAGGCTGCGAGGGTTACGAAAATCGTGGCATTGCTTGA CAAGGCTG GCAAACCAAG CAAAACTGCACCTCGATTTCTTAAGTCAAAGCAGAATG CA GTTGTG CAGGTTACCTTAGACGCTCCGGTCTGTGTTGAAGAATTCTCCAAATGCCGAGCTCTTGG CA GGGCATTCTTAAGGTCTGGTGGAAGCACAATCGCTGTTGGAGTCGTAACGCGGGTACTCGGGCAAGATCAGAACTGAAAGACCTCCGCCCAACATCTGAAAATTTGAACGTATCTGCAGCCGTGCCCTGCTTTGGGGTCCATAATATTGTAGTTGACTCAAAACGGTATTGCCGATGAGAAGAAGTTTGGCGACGGCATTTTTCACTGTGTGTTCGTCGCCATTTCAGAATTTAATCCGTCACTCTTTTAGTTATTTGTAATTTTCTTATGCCTAATGAAAAAGGGGGTT                    ]
[-] EMBL CB670476             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGCGGGATTCAAATTCATGTGACATAGCAAGAGCTGGTGATAATGTAGCGGTTAGTTTACAGGGCATCGATGGGAGTAAGCTAATAGCAGGTGGGATTCTTTGCAACCCTGGTTTCCCAGTGCCTGTCTCTAACTTCTTGGAGCTAAGGGTTTTAGTGTTGGACGTCACCATTCCTATCCTTATTGGCTATC AGGTCGAGTT TCACA TACATCATGTGAAGGAGGCTGCGAGGGTTACGAAAATCGTGGCATTGCTTGA CAAGGCTG GCAAACCAAG CAAAACTGCACCTCGATTTTTTAAGTCAAAGCAGAATG CA GTTGTG CAGGTTACCTTAGACGCTCCGGTCTGTGTTGAAGAATTTTCCAAATGCCGAGCTCTTGG CA GGGCATTCTTAAGGTCTGGTGGAAGCACAATCGCTGTTGGAGTCGTAACGCGGGTACTCGGGCAAGATCAGAACTGAAAGACCTCCGCCCAACATTTGAAAATTTGAACGTATCTGCAGCCGTGCCCTGCTTTGGGGTCCATAATATTGTAGTTGACTCAAAACGGTATTGCCGATGAGAAGAAGTTTGGCGACGGCATTTTTCACTGTGTGTTCGTCGCCATTTCAGAATTTAATCCGTCACTCTTTTAGTTATTTGTAATTTTCTTATGCCTAATGAAAAAAGGG                       ]
[+] EMBL BM420592             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACCATTCCTATCCTTATTGGCTATCAAGGTCGAGTTGTCACAGTACATCATGTGAAGGAGGCTGCGAGGGTTACGAAAATCGTGCCCTTGCTTGACCAAGGCTGNCCAACCCCAGCCTAAACTGCACCTCGATTTCTTAAGTCCAACCAGAATGCCACGTTGTGNCAGGTTACCTTAGACGCTCCGGTCTGTGTTGAAGAATTCTCCCAATGCCGAGCTCTTGGCCACGGGCATTCTTAAGGTCTTGTGGAAGCACNATCGCTGTTGGAGTCGTAACGCGGGTACTCGGGCAAGATCAGAACTGAAAGACCTCCGCCCAACATCTGAAAATTTGAACGTATCTGCAGCCGTGCCCTGCTTTGGGGTCCATAATATTGTACCTGACTC AAACGGTATTGCCGATGAGAAGAAGTTTGGCGACGGCATTTTTCACTGTGTGTTCGTCGCCATTTCAGAATTTAATCCGTCACTCTTTTAGTTATTTGTAATTTTCTTATGCCTAATGAAAAAGGGGGTTTGANCNTTCCAAAAAAAAAA]
[+] EMBL C27911               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TATCCTTATTGGCTATC AGGTCGAGTT TCACA TACATCATGTGAAGGAGGCTGCGAGGGTTACGAAAATCGTGGCATTGCTTGA CAAGGCTG GCAAACCAAG CAAAACTGCACCTCGATTTCTTAAGTCAAAGCAGAATG CA GTTGTG CAGGTTACCTTAGACGCTCCGGTCTGTGTTGAAGAATTCTCCAAATGCCGAGCTCTTGG CA GGGCATTCTTAAGGTCTGGTGGAAGCACAATCGCTGTTGGAGTCGT ACGCGGGTACTCGGGCAAGNTCAG ACTG AAGACCT CGNCCAc                                                                                                                                                                                                                          ]
[+] EMBL AU098300             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATCCTTATTGGCTATC AGGTCGA TT TCACA TACATCATGTGAAGGAGGCTGCGAGGGTTACGAAAATCGTGGCATTGCTTGA CAAGGCTG GCAAACCAAG CAAAACTGCACCTCGATTTCTTAAGTCAAAGCAGAATG CA GTTGTG CAGGTTACCTTAGACGCTCCGGTCTGTGTTGAAGAATTCTCCAAATGCCGAGCTCTTGG CA GGGCATTCTTAAGGTCTGGTGGAAGCACAATCGCTGTTGGAGTCGTAACGCGGGTACTCGGGCAAGATCAGAACTGAAAGACCTCCGCCCAACATCTGAAAATTTGAACGTATCTGCAGCCGTGCCCTGCTTTGGGGTCCATAATATTGTAGTTGACTCAAAACGGTATTGCCGATGAGAAGAAGTTTGGCGACGGCATTTTTCACTGTGTGTTCGTCGCCATTTCAGAATTTAATCCGTCACTCTTTTAGTTATTTGTAATTTTCTTATGCCTAATGAAAAAGGGGGTTTCAGGATTTCAAAAA     ]




>consensus_11904#1
ATAACACTATTTTTTCCCCCATTAGGTCTGCCCTGTGTCAGCAGGATGCCGCGCAAGGTT
GTCTCTGGGCCTGACTACGATGATGAGTACAATGATGACTATGATGAGTATGATGAAGAC
TATGATGATTACGGTGGGACTGGGCACAGTGACGACATTCAGCACCCTACGAAGGAGAAA
GAGTCATCGAAGAAGTCCTCAAGTATGGTGCCTGTGCTTTGGAGATGCTCCATGTGCATG
TTCGATAATCATGAAAGCATGGTGTATTGTGAGATGTGTGGGGTTTTTCGAGAATCCTTT
ATGAAATCTGCCAAGGATGGTTCAATAAAAGTCCATGGGATACCAAGTGATTTTGGGACA
CCTTCGATGCCGAAATCTGATTCTACAAAGATGCCAGTGAATACTCGTACTACAGACTTT
GGTGGTGACCCTGAGATAAAGAATGCTAGCATATCTCATGAGAAAGTTGGTTCCACACAG
TACGCATCTGTTGGTAGCTCATCAGGCGCTGGGAAAAAGCTGAAGGAGGACCAGAGTAGT
AGGGCTACCAGTTCTGCACAGAATGAGGATGTGGCCCAGAAACTTTCTTCTGACATACAG
AAGCTAGGTTTAGAAAAGAATGAAGTAGATACTGCAAAACCTTATTTACCTGAAGAATAT
AAGCCTGAGAAGTGGATGTTTGCTAATGAGGAATCAGGAGTGCTGAGCCAACTAAACCTT
GCAATAGTAGGTCATGTTGATTCTGGCAAGTCAACACTCTCTGGGAGACTGCTACATCTG
TTAGGAAGGATATCGAAAAAAGATATGCACAAGAATGAGAAGGAGGCTAAAGAAAAAGGA
AAAGGATCATTTGCTTATGCGTGGGCTATGGATGAAAGCAGTGAAGAAAGAGAAAGAGGT
GTGACAATGACTGTGGCTGTGGCTTATTTGGAGACCAATAAGTACCGTGTAGTTTTGCTT
GACTCTCCAGGCCATAAAGATTTTGTACCAAATATGATATCTGGCGCAACGCAAGCTGAT
GCAGCTATTCTTGTTGTTGATGCTTGCACTGGTTCATTTGAAGCTGGCATGGACGGTGAA
GGAGGGAAAAGTGTTGGCCAGACAAAAGAACATGCTCAGCTTATTAGAAGCTTCGGCGTT
GAACAGCTTATTGTTGCGGTCAACAAGATGGATGCCATCGGGTACTCCAAAGAAAGATTC
GAGTTCATCAAGGTTCAACTTGGTAGTTTTCTGCGGGCATGCAACTTCAAAGATTCATCT
GTTACCTGGATTCCTCTTAGTGCTGTTGAAAATCAGAATTTGATCAAAATTCCTTCTGAT
GTCCGTTTAACTTCCTGGTATCAAGGATTTTGTCTCTTGGATGCTATAGATTCCTTGCAG
CTTCCATCTCGGGATGTTTCAAAGCCCCTCATTCTTCCTATCTGTGATGTTATCAAGTCT
CAGTCAACAGGGCAGTTGGCAGCATTTGGAAAATTAGAGACTGGAGCTATTCGAATTGGT
TCAAAGGTTTTAATTTCACCTTGTGGGGAAGTGGCGACAGTGAAATCCATCGAGCGGGAT
TCAAATTCATGTGACATAGCAAGAGCTGGTGATAATGTAGCGGTTAGTTTACAGGGCATC
GATGGGAGTAAGCTAATAGCAGGTGGGATTCTTTGCAACCCTGGTTTCCCAGTGCCTGTC
TCTAACTTCTTGGAGCTAAGGGTTCTAGTGTTGGACGTCACCATTCCTATCCTTATTGGC
TATCAGGTCGAGTTTCACATACATCATGTGAAGGAGGCTGCGAGGGTTACGAAAATCGTG
GCATTGCTTGACAAGGCTGGCAAACCAAGCAAAACTGCACCTCGATTTCTTAAGTCAAAG
CAGAATGCAGTTGTGCAGGTTACCTTAGACGCTCCGGTCTGTGTTGAAGAATTCTCCAAA
TGCCGAGCTCTTGGCAGGGCATTCTTAAGGTCTGGTGGAAGCACAATCGCTGTTGGAGTC
GTAACGCGGGTACTCGGGCAAGATCAGAACTGAAAGACCTCCGCCCAACATCTGAAAATT
TGAACGTATCTGCAGCCGTGCCCTGCTTTGGGGTCCATAATATTGTAGTTGACTCAAAAC
GGTATTGCCGATGAGAAGAAGTTTGGCGACGGCATTTTTCACTGTGTGTTCGTCGCCATT
TCAGAATTTAATCCGTCACTCTTTTAGTTATTTGTAATTTTCTTATGCCTAATGAAAAAG
GGGGTTTGANCNTTCCAAAAAAAAAA

consensusID : consensus_11904#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 465
fasta sequence 
                              [ATCAAGTCTCAGTCAACAGGGCAGTTGGCAGCATTTGGAAAATTAGAGACTGGAGCTATTCGAATTGGTTCAAAGGTTTTAATTTCACCTTGTGGGGAAGTGGCGACAGTGAAATCCATCGAGCGGGATTCAAATTCATGTGACATAGCAAGAGCTGGTGATAATGTAGCGGTTAGTTTACAGGGCATCGATGGGAGTAAGCTAATAGCAGGTGGGATTCTTTGCAACCCTGGTTTCCCAGTGCCTGTCTCTAACTTCTTGGAGCTAAGGGTTCTAGTGTTGGACGTCACCATTCCTATCCTTATTGGCTATCAGGTCGAGTTTCACATACATCATGTGAAGGAGGCTGCGAGGGTTACGAAAATCGTGGCATTGCTTGACAAGGCTGGCAAACCAAGCAAAACTGCACCTCGATTTCTTAAGTCAAAGCAGAATGCAGTTGTGCAGNNNNNCTTNNNNNNTNCG]

[+] EMBL CF196414             [ATCAAGTCTCAGTCAACAGGGCAGTTGGCAGCATTTGGAAAATTAGAGACTGGAGCTATTCGAATTGGTTCAAAGGTTTTAATTTCACCTTGTGGGGAAGTGGCGACAGTGAAATCCATCGAGCGGGATTCAAATTCATGTGACATAGCAAGAGCTGGTGATAATGTAGCGGTTAGTTTACAGGGCATCGATGGGAGTAAGCTAATAGCAGGTGGGATTCTTTGCAACCCTGGTTTCCCAGTGCCTGTCTCTAACTTCTTGGAGCTAAGGGTTCTAGTGTTGGACGTCACCATTCCTATCCTTATTGGCTATCAGGTCGAGTTTCACATACATCATGTGAAGGAGGCTGCGAGGGTTACGAAAATCGTGGCATTGCTTGACAAGGCTGGCAAACCAAGCAAAACTGCACCTCGATTTCTTAAGTCAAAGCAGAATGCAGTTGTGCAGNNNNNCTTNNNNNNTNCG]




>consensus_11904#2
ATCAAGTCTCAGTCAACAGGGCAGTTGGCAGCATTTGGAAAATTAGAGACTGGAGCTATT
CGAATTGGTTCAAAGGTTTTAATTTCACCTTGTGGGGAAGTGGCGACAGTGAAATCCATC
GAGCGGGATTCAAATTCATGTGACATAGCAAGAGCTGGTGATAATGTAGCGGTTAGTTTA
CAGGGCATCGATGGGAGTAAGCTAATAGCAGGTGGGATTCTTTGCAACCCTGGTTTCCCA
GTGCCTGTCTCTAACTTCTTGGAGCTAAGGGTTCTAGTGTTGGACGTCACCATTCCTATC
CTTATTGGCTATCAGGTCGAGTTTCACATACATCATGTGAAGGAGGCTGCGAGGGTTACG
AAAATCGTGGCATTGCTTGACAAGGCTGGCAAACCAAGCAAAACTGCACCTCGATTTCTT
AAGTCAAAGCAGAATGCAGTTGTGCAGNNNNNCTTNNNNNNTNCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11904#1      ------------------------------------------------------------
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      CTTCTCCTCCCTCACGCTCTCTCCCAGGCCGCGCCATCAACGCCGCCGCGCTCCCCCGCT 60
                                                                                   

consensus_11904#1      ------------------------------------------------------------
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      CCGGTCGCCGGACTCCAACTCCGGTAACCCTCCAGTACCCGCTGCCGCCGCGAATCGGTT 120
                                                                                   

consensus_11904#1      ------------------------------------------------------------
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      CCCCTGGCTCCCACGAGCCTGCTCCTGCTAACCCTAGCCATCCGCCTCCTGCTGCTGCAG 180
                                                                                   

consensus_11904#1      ------------------------------------------------------------
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      CCCCCATGGAGATGGCCGGTGGAAAACACAGCACAACTGGTGGCTGCACCCTATCCCCAT 240
                                                                                   

consensus_11904#1      ------------------------------------------------------------
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      TGATACTCCCCCTGGACTCCGGTTCAAGGATTCTCCTATTGGAACTCTAGCTTCTCCCCT 300
                                                                                   

consensus_11904#1      ----------------------------------------ATAACACTATTTTTTCCCCC 20
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      TGCAGTTGATGTACCAACTCAGCTCCTCCTCCTGGAGCTGAAACCCCTCTCCTCTTGAAG 360
                                                                                   

consensus_11904#1      ATTAGGTCTGCC-CTGTGTCAGCAGGATGCCGCGCAAGGTTGTCTCTGGGCCTGACTACG 79
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      CTCAGGTACGCCGCTGTGTCAGCAGGATGCCACGCAAGGTTGTCTCTGGGCCTGACTACG 420
                                                                                   

consensus_11904#1      ATGATGAGTACAATGATGACTATGATGAGTATGATGAAGACTATGATGATTACGGTGGGA 139
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      ATGACGAGTACGACGATGACTATGATGAGTATGATGAGGACTACGATGATTACGGTGAGA 480
                                                                                   

consensus_11904#1      CTGGGCACAGTGACGACATTCAGCACCCTACGAAGGAG---AAAGAGTCATCGAAGAAGT 196
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      CCGGGCACAGTGACGACATTCAGCACCCCGTGAAGGAGGAGAAAGAGTCATCGAAGAAGT 540
                                                                                   

consensus_11904#1      CCTCAAGTATGGTGCCTGTGCTTTGGAGATGCTCCATGTGCATGTTCGATAATCATGAAA 256
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      CCTCAAGTACGGTGCCTGTGCTTTGGAGATGCTCCATGTGCATGTTCGATAATCATGAAA 600
                                                                                   

consensus_11904#1      GCATGGTGTATTGTGAGATGTGTGGGGTTTTTCGAGAATCCTTTATGAAATCTGCCAAGG 316
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      GCATGGTGTATTGTGAGATGTGTGGGGTTTTTCGAGAATCCTTTATGAAATCTGCCAAGG 660
                                                                                   

consensus_11904#1      ATGGTTCAATAAAAGTCCATGGGATACCAAGTGATTTTGGGACACCTTCGATGCCGAAAT 376
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      ATGGTTCAATAAAAGTCCATGGGATACCAAGTGATTTTGGGACACCTTCGATGCCGAAAT 720
                                                                                   

consensus_11904#1      CTGATTCTACAAAGATGCCAGTGAATACTCGTACTACAGACTTTGGTGGTGACCCTGAGA 436
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      CTGACTGTACCAAGATGCCAGTGAATACTCGTACTACAGACTTTGATGGTGACCCTGAGA 780
                                                                                   

consensus_11904#1      TAAAGAATGCTAGCATATCTCATGAGAAAGTTGGTTCCACACAGTACGCATCTGTTGGTA 496
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      TAAAGAATGCTAGCATATCTCATGAGAAAGTTGGTTCCACGCAGTACACATCTGCTGGTA 840
                                                                                   

consensus_11904#1      GCTCATCAGGCGCTGGGAAAAAGCTGAAGGAGGACCAGAGTAGTAGGGCTACCAGTTCTG 556
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      GCTCATCAGGCGCTGGGAAAAAGCTGAAGGAGGACCAGAGTAGTAGGGCTAGCAGTTCTG 900
                                                                                   

consensus_11904#1      CACAGAATGAGGATGTGGCCCAGAAACTTTCTTCTGACATACAGAAGCTAGGTTTAGAAA 616
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      CGCAGAATGAGGATGTGGCCCAGAAACTTTCTTCTGACATACAGAAGCTAGGTTTAGAAA 960
                                                                                   

consensus_11904#1      AGAATGAAGTAGATACTGCAAAACCTTATTTACCTGAAGAATATAAGCCTGAGAAGTGGA 676
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      AGAATGAAGTAGATACTGCAAAACCTTATTTACCTGAAGAATATAAGCCTGAGAAGTGGA 1020
                                                                                   

consensus_11904#1      TGTTTGCTAATGAGGAATCAGGAGTGCTGAGCCAACTAAACCTTGCAATAGTAGGTCATG 736
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      TGTTCGCTAATGAGGAATCAGGAGTGCTGAGCCAACTAAACCTTGCAATAGTAGGTCATG 1080
                                                                                   

consensus_11904#1      TTGATTCTGGCAAGTCAACACTCTCTGGGAGACTGCTACATCTGTTAGGAAGGATATCGA 796
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      TTGATTCTGGCAAGTCAACACTCTCTGGGAGACTGCTACATCTGTTAGGAAGGATATCGA 1140
                                                                                   

consensus_11904#1      AAAAAGATATGCACAAGAATGAGAAGGAGGCTAAAGAAAAAGGAAAAGGATCATTTGCTT 856
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      AAAAAGATATGCACAAGAATGAGAAGGAGGCTAAAGAAAAAGGAAAAGGATCATTTGCTT 1200
                                                                                   

consensus_11904#1      ATGCGTGGGCTATGGATGAAAGCAGTGAAGAAAGAGAAAGAGGTGTGACAATGACTGTGG 916
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      ATGCGTGGGCTATGGATGAAAGCAGTGAAGAAAGAGAAAGAGGCGTGACAATGACTGTGG 1260
                                                                                   

consensus_11904#1      CTGTGGCTTATTTGGAGACCAATAAGTACCGTGTAGTTTTGCTTGACTCTCCAGGCCATA 976
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      CCGTGGCTTATTTGGAGACTAAGAAGTACCGTGTAGTTTTGCTTGACTCTCCAGGCCATA 1320
                                                                                   

consensus_11904#1      AAGATTTTGTACCAAATATGATATCTGGCGCAACGCAAGCTGATGCAGCTATTCTTGTTG 1036
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      AAGATTTTGTACCAAATATGATATCTGGCGCAACGCAAGCTGATGCAGCTATTCTTGTTG 1380
                                                                                   

consensus_11904#1      TTGATGCTTGCACTGGTTCATTTGAAGCTGGCATGGACGGTGAAGGAGGGAAAAGTGTTG 1096
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      TTGATGCTTGCACTGGTTCATTTGAAGCTGGCATGGACGGTGAAGGAGGGAAAAGTGTTG 1440
                                                                                   

consensus_11904#1      GCCAGACAAAAGAACATGCTCAGCTTATTAGAAGCTTCGGCGTTGAACAGCTTATTGTTG 1156
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      GCCAGACAAAAGAACATGCTCAGCTTATTAGAAGCTTCGGCGTTGAACAGCTTATTGTTG 1500
                                                                                   

consensus_11904#1      CGGTCAACAAGATGGATGCCATCGGGTACTCCAAAGAAAGATTCGAGTTCATCAAGGTTC 1216
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      CGGTCAACAAGATGGATGCCATCGGCTACTCGAAAGAAAGATTTGAGTTCATCAAGGTTC 1560
                                                                                   

consensus_11904#1      AACTTGGTAGTTTTCTGCGGGCATGCAACTTCAAAGATTCATCTGTTACCTGGATTCCTC 1276
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      AACTTGGTAGTTTTCTGCGGTCATGCAATTTCAAAGATTCATCTGTTACCTGGATTCCTC 1620
                                                                                   

consensus_11904#1      TTAGTGCTGTTGAAAATCAGAATTTGATCAAAATTCCTTCTGATGTCCGTTTAACTTCCT 1336
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      TTAGTGCTGTTGAAAATCAGAATTTGATCAAAATTCCTTCTGATGTCCGTTTAACTTCCT 1680
                                                                                   

consensus_11904#1      GGTATCAAGGATTTTGTCTCTTGGATGCTATAGATTCCTTGCAGCTTCCATCTCGGGATG 1396
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      GGTATCAAGGATTTTGTCTCTTGGATGCTATAGATTCCTTGCAGCTTCCATCTCGGGATG 1740
                                                                                   

consensus_11904#1      TTTCAAAGCCCCTCATTCTTCCTATCTGTGATGTTATCAAGTCTCAGTCAACAGGGCAGT 1456
consensus_11904#2      -----------------------------------ATCAAGTCTCAGTCAACAGGGCAGT 25
consensus_11904#0      TTTCAAAGCCCCTCATTCTTCCTATCTGTGATGTTATCAAGTCTCAGTCAACAGGGCAGT 1800
                                                          *************************

consensus_11904#1      TGGCAGCATTTGGAAAATTAGAGACTGGAGCTATTCGAATTGGTTCAAAGGTTTTAATTT 1516
consensus_11904#2      TGGCAGCATTTGGAAAATTAGAGACTGGAGCTATTCGAATTGGTTCAAAGGTTTTAATTT 85
consensus_11904#0      TTGCAGCCTTTGGAAAATTAGAGACTGGAGCTATTCGAATTGGTTCAAAGGTTTTAATTT 1860
                       * ***** ****************************************************

consensus_11904#1      CACCTTGTGGGGAAGTGGCGACAGTGAAATCCATCGAGCGGGATTCAAATTCATGTGACA 1576
consensus_11904#2      CACCTTGTGGGGAAGTGGCGACAGTGAAATCCATCGAGCGGGATTCAAATTCATGTGACA 145
consensus_11904#0      CACCTTGTGGGGAAGTGGCGGCAGTGAAATCCATCGAGCGGGATTCAAATTCATGTGACA 1920
                       ******************** ***************************************

consensus_11904#1      TAGCAAGAGCTGGTGATAATGTAGCGGTTAGTTTACAGGGCATCGATGGGAGTAAGCTAA 1636
consensus_11904#2      TAGCAAGAGCTGGTGATAATGTAGCGGTTAGTTTACAGGGCATCGATGGGAGTAAGCTAA 205
consensus_11904#0      TAGCAAGAGCTGGTGATAATGTAGCGGTTAGTTTACAGGGTATCGATGGGAGTAAGCTAA 1980
                       **************************************** *******************

consensus_11904#1      TAGCAGGTGGGATTCTTTGCAACCCTGGTTTCCCAGTGCCTGTCTCTAACTTCTTGGAGC 1696
consensus_11904#2      TAGCAGGTGGGATTCTTTGCAACCCTGGTTTCCCAGTGCCTGTCTCTAACTTCTTGGAGC 265
consensus_11904#0      TACTAGGTGGGATTCTTTGCAACCCTGGTTTCCCAGTGCCTGTCTCTAACTTCTTGGAGC 2040
                       **  ********************************************************

consensus_11904#1      TAAGGGTTCTAGTGTTGGACGTCACCATTCCTATCCTTATTGGCTATCAGGTCGAGTTTC 1756
consensus_11904#2      TAAGGGTTCTAGTGTTGGACGTCACCATTCCTATCCTTATTGGCTATCAGGTCGAGTTTC 325
consensus_11904#0      TAAGGGTTCTAGTGTTAGACGTCACCATTCCTATCCTTATTGGCTATCAGGTCGAATTTC 2100
                       **************** ************************************** ****

consensus_11904#1      ACATACATCATGTGAAGGAGGCTGCGAGGGTTACGAAAATCGTGGCATTGCTTGACAAGG 1816
consensus_11904#2      ACATACATCATGTGAAGGAGGCTGCGAGGGTTACGAAAATCGTGGCATTGCTTGACAAGG 385
consensus_11904#0      ACATACATCATGTGAAGGAGGCTGCGAGGGTTACGAAAATCGTGGCATTGCTTGACAAGG 2160
                       ************************************************************

consensus_11904#1      CTGGCAAACCAAGCAAAACTGCACCTCGATTTCTTAAGTCAAAGCAGAATGCAGTTGTGC 1876
consensus_11904#2      CTGGCAAACCAAGCAAAACTGCACCTCGATTTCTTAAGTCAAAGCAGAATGCAGTTGTGC 445
consensus_11904#0      CTGGCAAACCAAGCAAAACTGCACCTCGTTTTCTTAAGTCAAAGCAGAATGCAGTTGTGC 2220
                       **************************** *******************************

consensus_11904#1      AGGTTACCTTAGACGCTCCGGTCTGTGTTGAAGAATTCTCCAAATGCCGAGCTCTTGGCA 1936
consensus_11904#2      AGNNNNNCTTNNNNNNTNCG---------------------------------------- 465
consensus_11904#0      AGGTTACCTTAGACGCTCCGGTCTGTGTTCAAGAATTCTCCAAATGCCGAGCTCTTGGCA 2280
                       **     ***      * **                                        

consensus_11904#1      GGGCATTCTTAAGGTCTGGTGGAAGCACAATCGCTGTTGGAGTCGTAACGCGGGTACTCG 1996
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      GGGCATTCTTAAGGTCTTCTGGAAGCACGATCGCTGTTGGAGTCGTAACGCGGGTACTCC 2340
                                                                                   

consensus_11904#1      GGCAAGATCAGAACTGAAAGACCTCCGCCCAACATCTGAAAATTTGAACGTATCTGCAGC 2056
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      GGCAAGATCAGAACTGAAAGACCTCCGCCCAACATCTGAAAATTTGAACGTATCTGCAGC 2400
                                                                                   

consensus_11904#1      CGTGCCCTGCTTTGGGGTCCATAATATTGTAGTTGACTCAAAACGGTATTGC-----CGA 2111
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      CGTGC-----TTTGGGGCCCATA---TTGTAGCTGACTCAAAACGGTACTGTAGTATTGT 2452
                                                                                   

consensus_11904#1      TGAGAAGAAGTTTGGCGACGGCATTTTTCACTGTGTGTTCGTCGCCATTTCAGAATTTAA 2171
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      CGATCAGAAGTTTGGCGACGGCATTTTTCACTGTGTGGTCGTCGCCATTTC--------- 2503
                                                                                   

consensus_11904#1      TCCGTCACTCTTTTAGTTATTTGTAATTTTCTTATGCCTAATGAAAAAGGGGGTTTGANC 2231
consensus_11904#2      ------------------------------------------------------------
consensus_11904#0      --CATCGTGCATTTCAGAATTTGCG-TTGAGATATGGCCTGTAAAATAGTCACTTTCACG 2560
                                                                                   

consensus_11904#1      NTTCCAAAAAAAAAA 2246
consensus_11904#2      ---------------
consensus_11904#0      AGTTCTAACCCC--- 2572


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)