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Oryza sativa
cluster # 11913 cluster # 11913       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11913#0 length = 1209 sequences # 7  
consensus_11913#1 length = 782 sequences # 2  

consensusID : consensus_11913#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1209
fasta sequence
                              [CCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCCGCCGCCGCCACCCCGCCGCCTCCCTCCTCCGGCGACCGCCGCGGGCAGAGCGCGACAAGAGGGAGGGAGGAGAGCTCGCCCGAGGTGGGGGCAGGGAGCGCGAGGAGAGGGTGAGGGGAAGATGGTGAGCTCTTCGTCGCCGGTGGTGAACGTGTACCCGCTCGCCAACTACACGTTCGGCACCAAGGAGCCCAAGATGGAGAAGGACACCTCCGTCGCCGACCGCCTCGCCCGCATGAAGGTCAACTACATGAAAGAAGGAATGCGGACCAGTGTTGAAGCAATCCTATTGGTGCAAGAACACAACCATCCCCACATACTGCTGTTGCAAATTGGTAATACATTTTGCAAGCTTCCTGGTGGACGTTTGAAGCCTGGAGAAAATGAAATTGAGGGTCTGAAAAGAAAGTTATGCAGTAAGCTTGCAGTGAACTCGCCTTCCTTTCCACCTAACTGGCAGGTTGGAGAGTGTGTTGCTGTATGGTGGAGGCCAAACTTTGAGACTGTGATGTATCCTTACTGCCCTCCACATATAACCAAGCCCAAGGAGTGCAAGAAGCTTTTCATTGTTCACCTATCTGAAAGAGAGTATTTTGCTGTTCCGAGGAACCTGAAGCTGCTTGCTGTTCCACTGTTTGAACTCTATGACAACGTTCAGCGATATGGGCCAGTCATTTCCACCATTCCGCAGCAGCTGTCTAGGTTCCAGTTCAACATGGTTAGCTCGTGAAGGTGATGAGAGATGGAGATTAGTGTGCACTAGGCTCTATTTGATGGGATCTTCAAC-GGGCTGAACTACCTAATCGACTT-GGCATGACTAATTTGTTCTATCACAGAGAATTTCCATGAATTAGCTTGGGAAAAATATTCT-GGATCCATCGTTGGACTGTTAGCTGGACATGCATTTCGACTGTATTTTGTT-GGATTGTTTTGTATCACATCGCAAAGCTGGTGCCTGGT-GTATTTTTAGATGATCTTTTGTTGGCTCTGCACGCTAATTGTTGGTGTACATGGCTCTGTATGCTTACTGCCTTGATGTTGTATGCTGTAGCTGTAACTCTTCAGGCTGCCTAGCTTTTTTTTCTAGCCAGGAACTCCCCCTCTTAACTGTAAAAATGCTTTGGATTTAAGACAACATAGAGAGGATTAAGCTTTTTACAGTGTTC]

[+] EMBL AK064962             [CCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCCGCCGCCGCCACCCCGCCGCCTCCCTCCTCCGGCGACCGCCGCGGGCAGAGCGCGACAAGAGGGAGGGAGGAGAGCTCGCCCGAGGTGGGGGCAGGGAGCGCGAGGAGAGGGTGAGGGGAAGATGGTGAGCTCTTCGTCGCCGGTGGTGAACGTGTACCCGCTCGCCAACTACACGTTCGGCACCAAGGAGCCCAAGATGGAGAAGGACACCTCCGTCGCCGACCGCCTCGCCCGCATGAAGGTCAACTACATGAAAGAAGGAATGCGGACCAGTGTTGAAGCAATCCTATTGGTGCAAGAACACAACCATCCCCACATACTGCTGTTGCAAATTGGTAATACATTTTGCAAGCTTCCTGGTGGACGTTTGAAGCCTGGAGAAAATGAAATTGAGGGTCTGAAAAGAAAGTTATGCAGTAAGCTTGCAGTGAACTCGCCTTCCTTTCCACCTAACTGGCAGGTTGGAGAGTGTGTTGCTGTATGGTGGAGGCCAAACTTTGAGACTGTGATGTATCCTTACTGCCCTCCACATATAACCAAGCCCAAGGAGTGCAAGAAGCTTTTCATTGTTCACCTATCTGAAAGAGAGTATTTTGCTGTTCCGAGGAACCTGAAGCTGCTTGCTGTTCCACTGTTTGAACTCTATGACAACGTTCAGCGATATGGGCCAGTCATTTCCACCATTCCGCAGCAGCTGTCTAGGTTCCAGTTCAACATGGTTAGCTCGTGAAGGTGATGAGAGATGGAGATTAGTGTGCACTAGGCTCTATTTGATGGGATCTTCAAC GGGCTGAACTACCTAATCGACTT GGCATGACTAATTTGTTCTATCACAGAGAATTTCCATGAATTAGCTTGGGAAAAATATTCT GGATCCATCGTTGGACTGTTAGCTGGACATGCATTTCGACTGTATTTTGTT GGATTGTTTTGTATCACATCGCAAAGCTGGTGCCTGGT GTATTTTTAGATGATCTTTTGTTGGCTCTGCACGCTAATTGTTGGTGTACATGGCTCTGTATGCTTACTGCCTTGATGTTGTATGCTGTAGCTGTAACTCTTCAGGCTGCCTAGCTTTTTTTTCTAGCCAGGAACTCCCCCTCTTAACTGTAAAAATGCTTTGGATTTAAGACAACATAGAGAGGATTA                 ]
[+] EMBL CB647876             [           TCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCCGCCGCCGCCACCCCGCCGCCTCCCTCCTCCGGCGACCGCCGCGGGCAGAGCGCGACAAGAGGGAGGGAGGAGAGCTCGCCCGAGGTGGGGGCAGGGAGCGCGAGGAGAGGGTGAGGGGAAGATGGTGAGCTCTTCGTCGCCGGTGGTGAACGTGTACCCGCTCGCCAACTACACGTTCGGCACCAAGGAGCCCAAGATGGAGAAGGACACCTCCGTCGCCGACCGCCTCGCCCGCATGAAGGTCAACTACATGAAAGAAGGAATGCGGACCAGTGTTGAAGCAATCCTATTGGTGCAAGAACACAACCATCCCCACATACTGCTGTTGCAAATTGGTAATACATTTTGCAAGCTTCCTGGTGGACGTTTGAAGCCTGGAGAAAATGAAATTGAGGGTCTGAAAAGAAAGTTATGCAGTAAGCTTGCAGTGAACTCGCCTTCCTTTCCACCTAACTGGCAGGTTGGAGAGTGTGTTGCTGTATGGTGGAGGCCAAACTTTGAGACTGTGATGTATCCTTACTGCCCTCCACATATAACCAAGCCCAAGGAGTGCAAGAAGCTTTTCATTGTTCACCTATCTGAAAGAGAGTATTTTGCTGTTCCGAGGAACCTGAAGCTGCTTGCTGTTCCACTGTTTGAACTCTATGACAACGTTCAGCGATATGGGCCAGTCATTTCCACCATTCCGCAGCAGCTGTCTAGGTTCCAGTTCAACATGGTTAGCTCGTGAAGGTGATGAGAGATGGAGATTAGTGTGCACTAGGCTCTATTTGATGGGATCTTCAAC GGGCTGA                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB647878             [           TCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCCGCCGCCGCCACCCCGCCGCCTCCCTCCTCCGGCGACCGCCGCGGGCAGAGCGCGACAAGAGGGAGGGAGGAGAGCTCGCCCGAGGTGGGGGGAGGGAGCGCGAGGAGAGGGTGAGGGGAAGATGGTGAGCTCTTCGTCGCCGGTGGTGAACGTGTACCCGCTCGCCAACTACACGTTCGGCACCAAGGAGCCCAAGATGGAGAAGGACACCTCCGTCGCCGACCGCCTCGCCCGCATGAAGGTCAACTACATGAAAGAAAGAATGCGGACCAGTGTTGAAGCAATCCTATTGGTGCAAGAACACAACCATCCCCACATACTGCTGTTGCAAATTGGGAATACATTTTGCAAGCTTCCTGGTGGACGTTTGAAGCCTGGAGAAAATGAAATTGAGGGTCTGAAAAGAAAGTTATGCAGTAAGCTTGCAGTGAACTCGCCTTCCTTTCCACCTAACTGGCAAGTTGGAGAGTGTGTTGCTGTATGGTGGACGCGAAACTTTGAGACTGTGATGTATCCTTACTGCCCTCCACATATAACCAAGCCCAAGGAGTGCACGAAGCTTTGCATTGATCACCTATCTGAAAGAGAGTATTTTGCTGTTCCGAGGAACCTGAAGCTGCTTGCTGATCCACTGTTTGAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA998983             [                                                                                                                                                                                                      ACCCGCTCGCCAACTACACGTTCGGCACCAAGGAGCCCAAGATGGAGAAGGACACCTCCGTCGCCGACCGCCTCGCCCGCATGAAGGTCAACTACATGAAAGAAGGAATGCGGACCAGTGTTGAAGCAATCCTATTGGTGCAAGAACACCACCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK060155             [                                                                                                                                                                                                                      CACGTTCGGCACCAAGGAGCCCAAGATGGAGAAGGACACCTCCGTCGCCGACCGCCTCGCCCGCATGAAGGTCAACTACATGAAAGAAGGAATGCGGACCAGTGTTGAAGCAATCCTATTGGTGCAAGAACACAACCATCCCCACATACTGCTGTTGCAAATTGGTAATACATTTTGCAAGCTTCCTGGTGGACGTTTGAAGCCTGGAGAAAATGAAATTGAGGGTCTGAAAAGAAAGTTATGCAGTAAGCTTGCAGTGAACTCGCCTTCCTTTCCACCTAACTGGCAGGTTGGAGAGTGTGTTGCTGTATGGTGGAGGCCAAACTTTGAGACTGTGATGTATCCTTACTGCCCTCCACATATAACCAAGCCCAAGGAGTGCAAGAAGCTTTTCATTGTTCACCTATCTGAAAGAGAGTATTTTGCTGTTCCGAGGAACCTGAAGCTGCTTGCTGTTCCACTGTTTGAACTCTATGACAACGTTCAGCGATATGGGCCAGTCATTTCCACCATTCCGCAGCAGCTGTCTAGGTTCCAGTTCAACATGGTTAGCTCGTGAAGGTGATGAGAGATGGAGATTAGTGTGCACTAGGCTCTATTTGATGGGATCTTCAAC GGGCTGAACTACCTAATCGACTT GGCATGACTAATTTGTTCTATCACAGAGAATTTCCATGAATTAGCTTGGGAAAAATATTCT GGATCCATCGTTGGACTGTTAGCTGGACATGCATTTCGACTGTATTTTGTT GGATTGTTTTGTATCACATCGCAAAGCTGGTGCCTGGT GTATTTTTAGATGATCTTTTGTTGGCTCTGCACGCTAATTGTTGGTGTACATGGCTCTGTATGCTTACTGCCTTGATGTTGTATGCTGTAGCTGTAACTCTTCAGGCTGCCTAGCTTTTTTTTCTAGCCAGGAACTCCCCCTCTTAACTGTAAAAATGCTTTGGATTTAAGACAACATAGAGAGGATTAAGCTTTTTACAGTGTTC]
[+] EMBL AK104757             [                                                                                                                                                                                                                      CACGTTCGGCACCAAGGAGCCCAAGATGGAGAAGGACACCTCCGTCGCCGACCGCCTCGCCCGCATGAAGGTCAACTACATGAAAGAAGGAATGCGGACCAGTGTTGAAGCAATCCTATTGGTGCAAGAACACAACCATCCCCACATACTGCTGTTGCAAATTGGTAATACATTTTGCAAGCTTCCTGGTGGACGTTTGAAGCCTGGAGAAAATGAAATTGAGGGTCTGAAAAGAAAGTTATGCAGTAAGCTTGCAGTGAACTCGCCTTCCTTTCCACCTAACTGGCAGGTTGGAGAGTGTGTTGCTGTATGGTGGAGGCCAAACTTTGAGACTGTGATGTATCCTTACTGCCCTCCACATATAACCAAGCCCAAGGAGTGCAAGAAGCTTTTCATTGTTCACCTATCTGAAAGAGAGTATTTTGCTGTTCCGAGGAACCTGAAGCTGCTTGCTGTTCCACTGTTTGAACTCTATGACAACGTTCAGCGATATGGGCCAGTCATTTCCACCATTCCGCAGCAGCTGTCTAGGTTCCAGTTCAACATGGTTAGCTCGTGAAGGTGATGAGAGATGGAGATTAGTGTGCACTAGGCTCTATTTGATGGGATCTTCAAC GGGCTGAACTACCTAATCGACTT GGCATGACTAATTTGTTCTATCACAGAGAATTTCCATGAATTAGCTTGGGAAAAATATTCT GGATCCATCGTTGGACTGTTAGCTGGACATGCATTTCGACTGTATTTTGTT GGATTGTTTTGTATCACATCGCAAAGCTGGTGCCTGGT GTATTTTTAGATGATCTTTTGTTGGCTCTGCACGCTAATTGTTGGTGTACATGGCTCTGTATGCTTACTGCCTTGATGTTGTATGCTGTAGCTGTAACTCTTCAGGCTGCCTAGCTTTTTTTTCTAGCCAGGAACTCCCCCTCTTAACTGTAAAAATGCTTTGGATTTAAGACAACATAGAGAGGATTAAGCTTTTTACAGTGTTC]
[+] EMBL OS0107A              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCGCCTTCCTTTCCACCTAACTGGCAGGTTGGAGAGTGTGTTGCTGTATGGTGGAGGCCAAACTTTGAGACTGTGATGTATCCTTACTGCCCTCCACATATAACCAAGCCCAAGGAGTGCAAGAAGCTTTTCATTGTTCACCTATCTGAAAGAGAGTATTTTGCTGTTCCGAGGAACCTGAAGCTGCTTGCTGTTCCACTGTTTGAACTCTATGACAACGTTCAGCGATATGGGCCAGTCATTTCCACCATTCCGCAGCAGCTGTCTAGGTTCCAGTTCAACATGGTTAGCTCGTGAAGGTGATGAGAGATGGAGATTAGTGTGCACTAGGCTCTATTTGATGGGATCTTCAACGGGGCTGAACTACCTAATCGACTTGGGCATGACTAATTTGTTCTATCACAGAGAATTTCCATGAATTAGCTTGGGAAAAATATTCTGGGATCCATCGTTGGACTGTTAGCTGGACATGCATTTCGACTGTATTTTGTTGGGATTGTTTTGTATCACATCGCAAAGCTGGTGCCTGGTGGTATTTTTA                                                                                                                                                                                                     ]


>consensus_11913#0 CCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCCGCCGCCGCCACCCCGCC GCCTCCCTCCTCCGGCGACCGCCGCGGGCAGAGCGCGACAAGAGGGAGGGAGGAGAGCTC GCCCGAGGTGGGGGCAGGGAGCGCGAGGAGAGGGTGAGGGGAAGATGGTGAGCTCTTCGT CGCCGGTGGTGAACGTGTACCCGCTCGCCAACTACACGTTCGGCACCAAGGAGCCCAAGA TGGAGAAGGACACCTCCGTCGCCGACCGCCTCGCCCGCATGAAGGTCAACTACATGAAAG AAGGAATGCGGACCAGTGTTGAAGCAATCCTATTGGTGCAAGAACACAACCATCCCCACA TACTGCTGTTGCAAATTGGTAATACATTTTGCAAGCTTCCTGGTGGACGTTTGAAGCCTG GAGAAAATGAAATTGAGGGTCTGAAAAGAAAGTTATGCAGTAAGCTTGCAGTGAACTCGC CTTCCTTTCCACCTAACTGGCAGGTTGGAGAGTGTGTTGCTGTATGGTGGAGGCCAAACT TTGAGACTGTGATGTATCCTTACTGCCCTCCACATATAACCAAGCCCAAGGAGTGCAAGA AGCTTTTCATTGTTCACCTATCTGAAAGAGAGTATTTTGCTGTTCCGAGGAACCTGAAGC TGCTTGCTGTTCCACTGTTTGAACTCTATGACAACGTTCAGCGATATGGGCCAGTCATTT CCACCATTCCGCAGCAGCTGTCTAGGTTCCAGTTCAACATGGTTAGCTCGTGAAGGTGAT GAGAGATGGAGATTAGTGTGCACTAGGCTCTATTTGATGGGATCTTCAACGGGCTGAACT ACCTAATCGACTTGGCATGACTAATTTGTTCTATCACAGAGAATTTCCATGAATTAGCTT GGGAAAAATATTCTGGATCCATCGTTGGACTGTTAGCTGGACATGCATTTCGACTGTATT TTGTTGGATTGTTTTGTATCACATCGCAAAGCTGGTGCCTGGTGTATTTTTAGATGATCT TTTGTTGGCTCTGCACGCTAATTGTTGGTGTACATGGCTCTGTATGCTTACTGCCTTGAT GTTGTATGCTGTAGCTGTAACTCTTCAGGCTGCCTAGCTTTTTTTTCTAGCCAGGAACTC CCCCTCTTAACTGTAAAAATGCTTTGGATTTAAGACAACATAGAGAGGATTAAGCTTTTT ACAGTGTTC



consensusID : consensus_11913#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 782
fasta sequence
                              [TTGAGGGTCTGAAAAGAAAAGTTATGCAGTAAGCTTGCAGTGAACTCGCCTTCCTTTCCACCTAACTGGCAGGTTGGAGAGTGTGTTGCTGTATGGTGGAGGCCAAACTTTGAGACTGTGATGTATCCTTACTGCCCTCCACATATAACCAAGCCCAAGGAGTGCAAGAAGCTTTTCATTGTTCACCTATCTGAAAGAGAGTATTTTGCTGTTCCGAGGAACCTGAAGCTGCTTGCTGTTCCACTGTTTGAACTCTATGACAACGTTCAGCGATATGGGCCAGTCATTTCCACCATTCCGCAGCAGCTGTTTAGGTTCCAGTTCAACATGGTTAGCTCGTGAAGGTGATGAGAGATGGAGATTAGTGTGCACTAGGCTCTATTTGATGGGATCTTCAACGGGCTGAACTACCTAATCGACTTGGCATGACTAATTTGTTCTATCACAGAGAATTTCCATGAATTAGCTTGGGAAAAATATTCTGGATCCATCGTTGGACTGTTAGCTGGACATGCATTTCGACTGTATTTTGTTGGATTGTTTTGTATCACATCGCAAAGCTGGTGCCTGGTGTATTTTTAGATGATCTTTTGTTGGCTCTGCACGCTAATTGTTGGTGTACATGGCTCTGTATGCTTACTGCCTTGATGTTGTATGCTGTAGCTGTAACTCTTCAGGCTGCCTAGCTTTTTTTTCTAGCCAGGAACTCCCCCTCTTAACTGTAAAAATGCTTTGGATTTAAGACAACATAGAGAGGATTAAGCTAAAAAAAAAAAAAAGGA]

[-] EMBL CB647877             [TTGAGGGTCTGAAAAGAAAAGTTATGCAGTAAGCTTGCAGTGAACTCGCCTTCCTTTCCACCTAACTGGCAGGTTGGAGAGTGTGTTGCTGTATGGTGGAGGCCAAACTTTGAGACTGTGATGTATCCTTACTGCCCTCCACATATAACCAAGCCCAAGGAGTGCAAGAAGCTTTTCATTGTTCACCTATCTGAAAGAGAGTATTTTGCTGTTCCGAGGAACCTGAAGCTGCTTGCTGTTCCACTGTTTGAACTCTATGACAACGTTCAGCGATATGGGCCAGTCATTTCCACCATTCCGCAGCAGCTGTTTAGGTTCCAGTTCAACATGGTTAGCTCGTGAAGGTGATGAGAGATGGAGATTAGTGTGCACTAGGCTCTATTTGATGGGATCTTCAACGGGCTGAACTACCTAATCGACTTGGCATGACTAATTTGTTCTATCACAGAGAATTTCCATGAATTAGCTTGGGAAAAATATTCTGGATCCATCGTTGGACTGTTAGCTGGACATGCATTTCGACTGTATTTTGTTGGATTGTTTTGTATCACATCGCAAAGCTGGTGCCTGGTGTATTTTTAGATGATCTTTTGTTGGCTCTGCACGCTAATTGTTGGTGTACATGGCTCTGTATGCTTACTGCCTTGATGTTGTATGCTGTAGCTGTAACTCTTCAGGCTGCCTAGCTTTTTTTTCTAGCCAGGAACTCCCCCTCTTAACTGTAAAAATGCTTTGGATTTAAGACAACATAGAGAGGATTAAGCTAAAAAAAAAAAAAAGGA]
[-] EMBL CB647879             [                                  TTGCAGTGAACTCGCCTTCCTTTCCACCTAACTGGCAGGTTGGAGAGTGTGTTGCTGTATGGTGGAGGCCAAACTTTGAGACTGTGATGTATCCTTACTGCCCTCCACATATAACCAAGCCCAAGGAGTGCAAGAAGCTTTTCATTGTTCACCTATCTGAAAGAGAGTATTTTGCTGTTCCGAGGAACCTGAAGCTGCTTGCTGTTCCACTGTTTGAACTCTATGACAACGTTCAGCGATATGGGCCAGTCATTTCCACCATTCCGCAGCAGCTGTTTAGGTTCCAGTTCAACATGGTTAGCTCGTGAAGGTGATGAGAGATGGAGATTAGTGTGCACTAGGCTCTATTTGATGGGATCTTCAACGGGCTGAACTACCTAATCGACTTGGCATGACTAATTTGTTCTATCACAGAGAATTTCCATGAATTAGCTTGGGAAAAATATTCTGGATCCATCGTTGGACTGTTAGCTGGACATGCATTTCGACTGTATTTTGTTGGATTGTTTTGTATCACATCGCAAAGCTGGTGCCTGGTGTATTTTTAGATGATCTTTTGTTGGCTTTGCACGCTAATTGTTGGTGTACATGGCTCTGTATGCTTACTCCCTTGATGTTGTATGCTGTAGCTGTAACTCTTCAGGCTGCCTAGCTTTTTTTTATAGCCAGGAACTCCCCCTCTTAACTGTAAAAATGCTTTGGATTTAAGACAACATAGAGAG                          ]


>consensus_11913#1 TTGAGGGTCTGAAAAGAAAAGTTATGCAGTAAGCTTGCAGTGAACTCGCCTTCCTTTCCA CCTAACTGGCAGGTTGGAGAGTGTGTTGCTGTATGGTGGAGGCCAAACTTTGAGACTGTG ATGTATCCTTACTGCCCTCCACATATAACCAAGCCCAAGGAGTGCAAGAAGCTTTTCATT GTTCACCTATCTGAAAGAGAGTATTTTGCTGTTCCGAGGAACCTGAAGCTGCTTGCTGTT CCACTGTTTGAACTCTATGACAACGTTCAGCGATATGGGCCAGTCATTTCCACCATTCCG CAGCAGCTGTTTAGGTTCCAGTTCAACATGGTTAGCTCGTGAAGGTGATGAGAGATGGAG ATTAGTGTGCACTAGGCTCTATTTGATGGGATCTTCAACGGGCTGAACTACCTAATCGAC TTGGCATGACTAATTTGTTCTATCACAGAGAATTTCCATGAATTAGCTTGGGAAAAATAT TCTGGATCCATCGTTGGACTGTTAGCTGGACATGCATTTCGACTGTATTTTGTTGGATTG TTTTGTATCACATCGCAAAGCTGGTGCCTGGTGTATTTTTAGATGATCTTTTGTTGGCTC TGCACGCTAATTGTTGGTGTACATGGCTCTGTATGCTTACTGCCTTGATGTTGTATGCTG TAGCTGTAACTCTTCAGGCTGCCTAGCTTTTTTTTCTAGCCAGGAACTCCCCCTCTTAAC TGTAAAAATGCTTTGGATTTAAGACAACATAGAGAGGATTAAGCTAAAAAAAAAAAAAAG GA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11913#0      CCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCCGCCGCCGCCACCCCGCC 60
consensus_11913#1      ------------------------------------------------------------
                                                                                   

consensus_11913#0      GCCTCCCTCCTCCGGCGACCGCCGCGGGCAGAGCGCGACAAGAGGGAGGGAGGAGAGCTC 120
consensus_11913#1      ------------------------------------------------------------
                                                                                   

consensus_11913#0      GCCCGAGGTGGGGGCAGGGAGCGCGAGGAGAGGGTGAGGGGAAGATGGTGAGCTCTTCGT 180
consensus_11913#1      ------------------------------------------------------------
                                                                                   

consensus_11913#0      CGCCGGTGGTGAACGTGTACCCGCTCGCCAACTACACGTTCGGCACCAAGGAGCCCAAGA 240
consensus_11913#1      ------------------------------------------------------------
                                                                                   

consensus_11913#0      TGGAGAAGGACACCTCCGTCGCCGACCGCCTCGCCCGCATGAAGGTCAACTACATGAAAG 300
consensus_11913#1      ------------------------------------------------------------
                                                                                   

consensus_11913#0      AAGGAATGCGGACCAGTGTTGAAGCAATCCTATTGGTGCAAGAACACAACCATCCCCACA 360
consensus_11913#1      ------------------------------------------------------------
                                                                                   

consensus_11913#0      TACTGCTGTTGCAAATTGGTAATACATTTTGCAAGCTTCCTGGTGGACGTTTGAAGCCTG 420
consensus_11913#1      ------------------------------------------------------------
                                                                                   

consensus_11913#0      GAGAAAATGAAATTGAGGGTCTGAAAAGAAA-GTTATGCAGTAAGCTTGCAGTGAACTCG 479
consensus_11913#1      ------------TTGAGGGTCTGAAAAGAAAAGTTATGCAGTAAGCTTGCAGTGAACTCG 48
                                   ******************* ****************************

consensus_11913#0      CCTTCCTTTCCACCTAACTGGCAGGTTGGAGAGTGTGTTGCTGTATGGTGGAGGCCAAAC 539
consensus_11913#1      CCTTCCTTTCCACCTAACTGGCAGGTTGGAGAGTGTGTTGCTGTATGGTGGAGGCCAAAC 108
                       ************************************************************

consensus_11913#0      TTTGAGACTGTGATGTATCCTTACTGCCCTCCACATATAACCAAGCCCAAGGAGTGCAAG 599
consensus_11913#1      TTTGAGACTGTGATGTATCCTTACTGCCCTCCACATATAACCAAGCCCAAGGAGTGCAAG 168
                       ************************************************************

consensus_11913#0      AAGCTTTTCATTGTTCACCTATCTGAAAGAGAGTATTTTGCTGTTCCGAGGAACCTGAAG 659
consensus_11913#1      AAGCTTTTCATTGTTCACCTATCTGAAAGAGAGTATTTTGCTGTTCCGAGGAACCTGAAG 228
                       ************************************************************

consensus_11913#0      CTGCTTGCTGTTCCACTGTTTGAACTCTATGACAACGTTCAGCGATATGGGCCAGTCATT 719
consensus_11913#1      CTGCTTGCTGTTCCACTGTTTGAACTCTATGACAACGTTCAGCGATATGGGCCAGTCATT 288
                       ************************************************************

consensus_11913#0      TCCACCATTCCGCAGCAGCTGTCTAGGTTCCAGTTCAACATGGTTAGCTCGTGAAGGTGA 779
consensus_11913#1      TCCACCATTCCGCAGCAGCTGTTTAGGTTCCAGTTCAACATGGTTAGCTCGTGAAGGTGA 348
                       ********************** *************************************

consensus_11913#0      TGAGAGATGGAGATTAGTGTGCACTAGGCTCTATTTGATGGGATCTTCAACGGGCTGAAC 839
consensus_11913#1      TGAGAGATGGAGATTAGTGTGCACTAGGCTCTATTTGATGGGATCTTCAACGGGCTGAAC 408
                       ************************************************************

consensus_11913#0      TACCTAATCGACTTGGCATGACTAATTTGTTCTATCACAGAGAATTTCCATGAATTAGCT 899
consensus_11913#1      TACCTAATCGACTTGGCATGACTAATTTGTTCTATCACAGAGAATTTCCATGAATTAGCT 468
                       ************************************************************

consensus_11913#0      TGGGAAAAATATTCTGGATCCATCGTTGGACTGTTAGCTGGACATGCATTTCGACTGTAT 959
consensus_11913#1      TGGGAAAAATATTCTGGATCCATCGTTGGACTGTTAGCTGGACATGCATTTCGACTGTAT 528
                       ************************************************************

consensus_11913#0      TTTGTTGGATTGTTTTGTATCACATCGCAAAGCTGGTGCCTGGTGTATTTTTAGATGATC 1019
consensus_11913#1      TTTGTTGGATTGTTTTGTATCACATCGCAAAGCTGGTGCCTGGTGTATTTTTAGATGATC 588
                       ************************************************************

consensus_11913#0      TTTTGTTGGCTCTGCACGCTAATTGTTGGTGTACATGGCTCTGTATGCTTACTGCCTTGA 1079
consensus_11913#1      TTTTGTTGGCTCTGCACGCTAATTGTTGGTGTACATGGCTCTGTATGCTTACTGCCTTGA 648
                       ************************************************************

consensus_11913#0      TGTTGTATGCTGTAGCTGTAACTCTTCAGGCTGCCTAGCTTTTTTTTCTAGCCAGGAACT 1139
consensus_11913#1      TGTTGTATGCTGTAGCTGTAACTCTTCAGGCTGCCTAGCTTTTTTTTCTAGCCAGGAACT 708
                       ************************************************************

consensus_11913#0      CCCCCTCTTAACTGTAAAAATGCTTTGGATTTAAGACAACATAGAGAGGATTAAGCTTTT 1199
consensus_11913#1      CCCCCTCTTAACTGTAAAAATGCTTTGGATTTAAGACAACATAGAGAGGATTAAGCTAAA 768
                       *********************************************************   

consensus_11913#0      TACAGTGTTC---- 1209
consensus_11913#1      AAAAAAAAAAAGGA 782
                        * *          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)