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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11916#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2441 fasta sequence
[TCACCTGAAGCACCTAAGGTTCACATGGACTTGCCATCCTCACAGCTCACCAATCTTGGAGGCACCGATACATTGTGATGGAATTTCAGCCACTTCCTCAGGGAGTTCACCCAAACACTTCAGAACCAGCCATGGAGCCCATGGCAAGTGAGTCATCTGTGCCCATAGGGACAGCTTTTGCAGACTTGCTGCTGCAAGGGCCAGAGCACCCAAGCCTGTGGAATGATCTCACCGGCATGTTCAGGAAGGCATTCCGTTGGCAAGGTGCAGACAAGCGCTTCACACTGTCTGTGTATGTGATGTCTGTTCTACAGGGTCTGTTTCCAATACTTGACTGGTGGAAAACCTACAATCTGAAATTCTTTCGAAGTGACCTCATGGCTGGCCTAACTCTTGCAAGCCTTAGCATTCCACAGAGCATTGGATATGCAACTCTGGCAAAACTGGATCCTCAGTATGGTCTTTATACAAGTGTTGTGCCACCTCTTGTATATGCTGTGACGGGGTCCTCTAGGGAGATAGCCATTGGACCAGTTGCCATTGTGTCATTATTGCTTTCATCAATGATTCAGAAGATAGTTGACCCATCTGTTGATCCAGCGTTCTACCGAAAAATGGTCTTTACCGTGACATTCCTTACTGGTGTCTTTCAGTTTGCATTTGGTCTGTTCAGACTGGGATTTCTTGTGGATTTTCTATCACATGCTGCTATCGTCGGGTTCATGGGAGGAGCTGCTATTGTGATTGGATTACAGCAGCTGAAGGGGCTGCTTGGACTTAGTCATTTTACAAATAGAACTGATGTCGTCTCTGTCACCAAGGCAGTCTGGGTTTCAGTTCACGAAACATGGCATCCGGAGAACGTCTTCATTGGATGTTCCTTTTTCATGTTCATTCTTGCCATGAGATTCATTGGAAGGAAGTACAAGAAACTCTTTTGGGTCTCTGCCATTGCACCTGTACTATCAGTTGCACTATCTACTCTGTTTGTCTATGCGACAAGAGCGGATAAGCACGGCGTGAAGATTATACAAAAAGTGAATTCAGGTATTAATGCAAGTTCTGTCGAGCAGATAGATCTCAAAGGAGGCTATGCTGCCGAATGTGCAAAGATTGCTCTTGTTTGTGCTGTGATTGCTCTGACGGAAGCTGTTGCTGTTGGCCGCTCTTTTTCAGCGATCAATGGATATCGGTTGGACGGAAATAAGGAAATGGTAGCAATGGGCTTCATGAATATAGCAGGATCCTTATCATCATGCTATGTAGCAACAGGTTCATTCTCGCGCACAGCTGTGAACTTCGCTGCTGGTTGCAAGACAACCGTTTCAAACATTATCATGGCTGCCACTGTGATGGTTGCCTTGGAGCTTCTCACAAAGCTCCTGTACTACACACCTGTGTCCATCCTTGCATCAATCATTCTGTCAGCTCTTCCAGGATTGATCAATGTGCAGGAAGTCCGCTTCCTGTGGAAAGTCGACAAGATGGACTTCCTCACATGCATGGGATCATTCCTTGGTGTTCTATTCGGATCAGTGGAGATTGGTCTTTCAGTTGCACTTCTTGTTTCCTTTGCAAAGATCATTATACAGTCGATTTGGCCTCAAGTAGAGATTCTTGGGAGGCTTCAGGGCACAGAAATCTTCTGTAACGTCAAGCAGTATCCAGTGGTTCACGAAACACCGACTGTACTGACCGTACGCATTGAAACATCATTCCTTTGCTTCGTCAACTCCAGTTCCATCAAAGAAAAGATCATGGGATGGGTAACCGATGAGCGCGAGGCATTTTGCTCGGTCGTTCTTGACATGTCAAATGTGGTAAACATGGATACTTCAGGTCTTGTGGCGCTGGAAGAACTGCACAAGGAGCTGGCGTGTCTCGGCATCCAGATGGCTATAGCCAAGCCTGGATGGCAGGTGATCCACAAGATGAAACTGGCACGGCTCGTCGACGGAATCGGAGAAGGATGGTTCTTCCTCACGGTGGGCGAAGCCGTGGAAGCTTGCCTGGCAAACAAGGCGGGAAACGCCCTGGAATGCTGCTGAATCGAATCCACCGTGTGCATGGTCTCTCCGGTGGTTGAATAAAGAGAGACACTAGTGCTTCGTGGTACGCTACAAAAGGATTGTGTTGTGTGCTAGTGCTGCACGATGATGCAGCTTCAGCTGTAGTGTGGTGCTTCATGGATTGTGCGACGTGCAACTGTTGGGGGAAGACGAACTGTGTCTGTCTGAACTTAGTATGCCGAGTTCGTCTAAATTCCCCACTATAGCTGTAGGTTTGTGATGTATCGGATGCATTTGTGAAGAGCAAATGCCAGGTTTTAAGTGTTGGAACTGATGATTGTGTAATATTATTATATTAATCGAGTTTGTATAATTAATTTGTACTCGAGTTTGTGCGTTTTGGCAAAATCCGAGCTAGTATGCTGCAAAATT]
[+] EMBL AK067353 [TCACCTGAAGCACCTAAGGTTCACATGGACTTGCCATCCTCACAGCTCACCAATCTTGGAGGCACCGATACATTGTGATGGAATTTCAGCCACTTCCTCAGGGAGTTCACCCAAACACTTCAGAACCAGCCATGGAGCCCATGGCAAGTGAGTCATCTGTGCCCATAGGGACAGCTTTTGCAGACTTGCTGCTGCAAGGGCCAGAGCACCCAAGCCTGTGGAATGATCTCACCGGCATGTTCAGGAAGGCATTCCGTTGGCAAGGTGCAGACAAGCGCTTCACACTGTCTGTGTATGTGATGTCTGTTCTACAGGGTCTGTTTCCAATACTTGACTGGTGGAAAACCTACAATCTGAAATTCTTTCGAAGTGACCTCATGGCTGGCCTAACTCTTGCAAGCCTTAGCATTCCACAGAGCATTGGATATGCAACTCTGGCAAAACTGGATCCTCAGTATGGTCTTTATACAAGTGTTGTGCCACCTCTTGTATATGCTGTGACGGGGTCCTCTAGGGAGATAGCCATTGGACCAGTTGCCATTGTGTCATTATTGCTTTCATCAATGATTCAGAAGATAGTTGACCCATCTGTTGATCCAGCGTTCTACCGAAAAATGGTCTTTACCGTGACATTCCTTACTGGTGTCTTTCAGTTTGCATTTGGTCTGTTCAGACTGGGATTTCTTGTGGATTTTCTATCACATGCTGCTATCGTCGGGTTCATGGGAGGAGCTGCTATTGTGATTGGATTACAGCAGCTGAAGGGGCTGCTTGGACTTAGTCATTTTACAAATAGAACTGATGTCGTCTCTGTCACCAAGGCAGTCTGGGTTTCAGTTCACGAAACATGGCATCCGGAGAACGTCTTCATTGGATGTTCCTTTTTCATGTTCATTCTTGCCATGAGATTCATTGGAAGGAAGTACAAGAAACTCTTTTGGGTCTCTGCCATTGCACCTGTACTATCAGTTGCACTATCTACTCTGTTTGTCTATGCGACAAGAGCGGATAAGCACGGCGTGAAGATTATACAAAAAGTGAATTCAGGTATTAATGCAAGTTCTGTCGAGCAGATAGATCTCAAAGGAGGCTATGCTGCCGAATGTGCAAAGATTGCTCTTGTTTGTGCTGTGATTGCTCTGACGGAAGCTGTTGCTGTTGGCCGCTCTTTTTCAGCGATCAATGGATATCGGTTGGACGGAAATAAGGAAATGGTAGCAATGGGCTTCATGAATATAGCAGGATCCTTATCATCATGCTATGTAGCAACAGGTTCATTCTCGCGCACAGCTGTGAACTTCGCTGCTGGTTGCAAGACAACCGTTTCAAACATTATCATGGCTGCCACTGTGATGGTTGCCTTGGAGCTTCTCACAAAGCTCCTGTACTACACACCTGTGTCCATCCTTGCATCAATCATTCTGTCAGCTCTTCCAGGATTGATCAATGTGCAGGAAGTCCGCTTCCTGTGGAAAGTCGACAAGATGGACTTCCTCACATGCATGGGATCATTCCTTGGTGTTCTATTCGGATCAGTGGAGATTGGTCTTTCAGTTGCACTTCTTGTTTCCTTTGCAAAGATCATTATACAGTCGATTTGGCCTCAAGTAGAGATTCTTGGGAGGCTTCAGGGCACAGAAATCTTCTGTAACGTCAAGCAGTATCCAGTGGTTCACGAAACACCGACTGTACTGACCGTACGCATTGAAACATCATTCCTTTGCTTCGTCAACTCCAGTTCCATCAAAGAAAAGATCATGGGATGGGTAACCGATGAGCGCGAGGCATTTTGCTCGGTCGTTCTTGACATGTCAAATGTGGTAAACATGGATACTTCAGGTCTTGTGGCGCTGGAAGAACTGCACAAGGAGCTGGCGTGTCTCGGCATCCAGATGGCTATAGCCAAGCCTGGATGGCAGGTGATCCACAAGATGAAACTGGCACGGCTCGTCGACGGAATCGGAGAAGGATGGTTCTTCCTCACGGTGGGCGAAGCCGTGGAAGCTTGCCTGGCAAACAAGGCGGGAAACGCCCTGGAATGCTGCTGAATCGAATCCACCGTGTGCATGGTCTCTCCGGTGGTTGAATAAAGAGAGACACTAGTGCTTCGTGGTACGCTACAAAAGGATTGTGTTGTGTGCTAGTGCTGCACGATGATGCAGCTTCAGCTGTAGTGTGGTGCTTCATGGATTGTGCGACGTGCAACTGTTGGGGGAAGACGAACTGTGTCTGTCTGAACTTAGTATGCCGAGTTCGTCTAAATTCCCCACTATAGCTGTAGGTTTGTGATGTATCGGATGCATTTGTGAAGAGCAAATGCCAGGTTTTAAGTGTTGGAACTGATGATTGTGTAATATTATTATATTAATCGAGTTTGTATAATTAATTTGTACTCGAGTTTGT ]
[+] EMBL CB683667 [ AGATCTTCATTGGACCAGTTGCCATTGTGTCATTATTGCTTTCATCAATGATTCAGAAGATAGTTGACCCATCTGTTGATCCAGCGTTCTACCGAAAAATGGTCTTTACCGTGACATTCCTTACTGGTGTCTTTCACTTTGCATTTGGTCTGTTCAGACTGGGATTTCTTGTGGATTTTCTATCACATGCTGCTATCGTCGGGTTCATGGGAGGAGCTGCTATTGTGATTGGATTACAGCAACTGAAGGGGCTGCTTGGACTTATTCATTTTACAAATAGAACTGATGTCGTCTCTGTCACCAAGGCAGTCTGGGTTTCATTTCACGAAACATGGCATCCGGATAACGTCTTCATTGGATGTTCCTTTTTCATGTTCATTCTTGCCATGAGATTCATTGGAAGGAAGTACAATAAACTCTTTTGGGTCTCTGCCATTGCACCTGTACTATCAGTTGCACTATCTACTCTGTTTGTCTATGCGACAAGAGCGGATAAGCACGGCGTGAAGATTATACAAAAAGTGAATTCTCGTATTAATGCAAGTTCTGTCGAGCAGATATATCTCAAAGGAGGCTATGCTGCCGAATGTGCAAAGATTGCTCTTGTTTGTGCTGTGATTGCTCTGACGGAAGCTGTTGCTGTTGGCCGCTCTTCTTCAGCGATCAATGGATATCGGTTGGACGGAAATAACGAAATGGTAGCCATGGGCTTCATGAATA ]
[+] EMBL AU030962 [ CTTTTGGGTCTCTGCCATTGCACCTGTACTATCAGTTGCACTATCTACTCTGTTTGTCTATGCGACAAGAGCGGATAAGCACGGCGTGAAGATTATACAAAAAGTGAATTCAGGTATTAATGCAAGTTCTGTCGAGCAGATAGATCTCAAAGGAGGCTATGCTGCCGAATGTGCAAAGATTGCTCTTGTTTGTGCTGTGATTGCTCTGACGGAAGCTGTTGCTGTTGGCCGCTCTTTTTCAGCGATCAATGGATATCGGTTGGACGGAAATAAGGAAATGGTAGCAATGGGCTTCATGAATATAGCAGGATCCTTATCATCATGCTATGTAGCNACAGGTTCATTCTCGCGCACA NTGTGAACTTCGCTGC ]
[+] EMBL AU030961 [ TTCACG AACACCGACTTTACTGCCCGTACGCATTGAAACATCATCCCTTTGCTCCNTCAACTCCAGTCCCATCAAAGAAAAGATCATGGGATGGGTAACCGATGANCCCGAGGCATTTTGCTCGGTCGTTCTTGACATTTCAAATGTGGTAAACATGGATACTTCAGGTCTTGTGGCGCTGGAAGAACTGCACAAGGAGCTGGCNTGTCTCGGCATCCAGATGGCTATAGCCAAGCCTGGATGGCAGGTGATCCACAAGATGAAACTGGCACGGCTCGTCGACGGAATCGGAGAAGGATGGTTCTTCCTCACGGTGGGCGAAGCCGTGGAAGCTTGCCTGGCAAACAAGGCGGGAAACGCCCTGGAATGCTGCTGAATCGAATCCACCGTGTGCATGGTCTCTCCGGTGGTTGAATAAAGAGAGACACTAGTGCTTCGTGGTACGCTACAAAAGGATTGTGTTGTGTGCTAGTGCTGCACGATGATGCAGCTTCAGCTGTAGTGTGGTGCTTCATGGATTGTGCGACGTGCAACTGTTGGGGGAAGACGAACTGTGTCTGTCTGAACTTAGTATGCCGAGTTCGTCTAAATTCCCCACTATAGCTGTAGGTTTGTGATGTATCGGATGCATTTGTGAAGAGCAAATGCCAGGTTTTAAGTGTTGGAACTGATGATTGTGTAATATTATTAaaaaa ]
[-] EMBL CB679410 [ CATTCCTTTGCTTCGTCAACTCCAGTTCCATCAAAGAAAAGATCATGGGATGGGTAACCGATGAGCGCGAGGCATTTTGCTCGGTCGTTCTTGACATGTCAAATGTGGTAACCATGGATACTTCAGGTCTTGTGGCGCTGGAAGAACTGCACAAGGAGCTGGCGTGTCTCGGCATCCAGATGGCTATAGCCAAGCCTGGATGGCAGGTGATCCACAAGATGAAACTGGCACGGCTCGTCGACGGAATCGGAGAAGGATGGTTCTTCCTCACGGTGGGCGAAGCCGTGGAAGCTTGCCTGGCAAACAAGGCGGGAAACGCCCTGGAATGCTGCTGAATCGAATCCCCCGTGTGCATGGTCTCTCCGGTGGTTGAATAAAGAGAGCCACTAGTGCTTCGTGGTACGCTACAAAAGGATTGTGTTGTGTGCTAGTGCTGCACGATGATGCAGCTTCAGCTGTAGTGTGGTGCTTCATGGATTGTGCGACGTGCAACTGTTGGGGGAAGACGAACTGTGTCTGTCTGAACTTAGTATGCCGAGTTCGTCTAAATTCCCCCCTATAGCTGTAGGTTTGTGATGTATCGGATGCATTTGTGAAGAGCAAATGCCAGGTTTTAAGTGTTGGAACTGATGATTGTGTAATATTATTATATTAATCGAGTTTGTATAATTAATTTGTACTCGAGTTTGTGCGTTTTGGCAAAATCCGAGCTAGTATGCTGCAAAATT]
consensusID : consensus_11916#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 959 fasta sequence
[TCGGATCAGTGGAGATTGGTCTTTCAGTTGCAGTACTGATCCCTCATTTGATCTGAAGTTTACTACTGTATTTTTTTTTTCATTTTGATTCATCAGAAGTATGTTGAAGTTTCATTTCTTGCATGCATGCTTATGCAATTCTGATTTGGTGGAGCTCTTCTTGCAGCTTCTTGTTTCCTTTGCAAAGATCATTATACAGTCGATTTGGCCTCAAGTAGAGATTCTTGGGAGGCTTCAGGGCACAGAAATCTTCTGTAACGTCAAGCAGTATCCAGTGGTTCACGAAACACCGACTGTACTGACCGTACGCATTGAAACATCATTCCTTTGCTTCGTCAACTCCAGTTCCATCAAAGAAAAGATCATGGGATGGGTAACCGATGAGCGCGAGGCATTTTGCTCGGTCGTTCTTGACATGTCAAATGTGGTAAACATGGATACTTCAGGTCTTGTGGCGCTGGAAGAACTGCACAAGGAGCTGGCGTGTCTCGGCATCCAGATGGCTATAGCCAAGCCTGGATGGCAGGTGATCCACAAGATGAAACTGGCACGGCTCGTCGACGGAATCGGAGAAGGATGGTTCTTCCTCACGGTGGGCGAAGCCGTGGAAGCTTGCCTGGCAAACAAGGCGGGAAACGCCCTGGAATGCTGCTGAATCGAATCCACCGTGTGCATGGTCTCTCCGGTGGTTGAATAAAGAGAGACACTAGTGCTTCGTGGTACGCTACAAAAGGATTGTGTTGTGTGCTAGTGCTGCACGATGATGCAGCTTCAGCTGTAGTGTGGTGCTTCATGGATTGTGCGACGTGCAACTGTTGGGGGAAGACGAACTGTGTCTGTCTGAACTTAGTATGCCGAGTTCGTCTAAATTCCCCACTATAGCTGTAGGTTTGTGATGTATCGGATGCATTTGTGAAGAGCAAATGCCAGGTTTTAAGTGTTGGAACTAAAAAAAAAGA]
[+] EMBL CB679409 [TCGGATCAGTGGAGATTGGTCTTTCAGTTGCAGTACTGATCCCTCATTTGATCTGAAGTTTACTACTGTATTTTTTTTTTCATTTTGATTCATCAGAAGTATGTTGAAGTTTCATTTCTTGCATGCATGCTTATGCAATTCTGATTTGGTGGAGCTCTTCTTGCAGCTTCTTGTTTCCTTTGCAAAGATCATTATACAGTCGATTTGGCCTCAAGTAGAGATTCTTGGGAGGCTTCAGGGCACAGAAATCTTCTGTAACGTCAAGCAGTATCCAGTGGTTCACGAAACACCGACTGTACTGACCGTACGCATTGAAACATCATTCCTTTGCTTCGTCAACTCCAGTTCCATCAAAGAAAAGATCATGGGATGGGTAACCGATGAGCGCGAGGCATTTTGCTCGGTCGTTCTTGACATGTCAAATGTGGTAAACATGGATACTTCAGGTCTTGTGGCGCTGGAAGAACTGCACAAGGAGCTGGCGTGTCTCGGCATCCAGATGGCTATAGCCAAGCCTGGATGGCAGGTGATCCACAAGATGAAACTGGCACGGCTCGTCGACGGAATCGGAGAAGGATGGTTCTTCCTCACGGTGGGCGAAGCCGTGGAAGCTTGCCTGGCAAACAAGGCGGGAAACGCCCTGGAATGCTGCTGAATCGAATCCACCGTGTGCATGGTCTCTCCGGTGGTTGAATAAAGAGAGACACTAGTGCTTCGTGGTACGCTACAAAAGGATTGTGTTGTGTG ]
[-] EMBL CB683205 [ CAAAGATCATTATACAGTCGATTTGGCCTCAAGTAGAGATTCTTGGGAGGCTTCAGGGCACAGAAATCTTCTGTAACGTCAAGCAGTATCCAGTGGTTCACGAAACACCGACTGTACTGACCGTACGCATTGAAACATCATTCCTTTGCTTCGTCAACTCCAGTTCCATCAAAGAAAAGATCATGGGATGGGTAACCGATGAGCGCGAGGCATTTTGCTCGGTCGTTCTTGACATGTCAAATGTGGTAAACATGGATACTTCAGGTCTTGTGGCGCTGGAAGAACTGCACAAGGAGCTGGCGTGTCTCGGCATCCAGATGGCTATAGCCAAGCCTGGATGGCAGGTGATCCACAAGATGAAACTGGCACGGCTCGTCGACGGAATCGGAGAAGGATGGTTCTTCCTCACGGTGGGCGAAGCCGTGGAAGCTTGCCTGGCAAACAAGGCGGGAAACGCCCTGGAATGCTGCTGAATCGAATCCACCGTGTGCATGGTCTCTCCGGTGGTTGAATAAAGAGAGACACTAGTGCTTCGTGGTACGCTACAAAAGGATTGTGTTGTGTGCTAGTGCTGCACGATGATGCAGCTTCAGCTGTAGTGTGGTGCTTCATGGATTGTGCGACGTGCAACTGTTGGGGGAAGACGAACTGTGTCTGTCTGAACTTAGTATGCCGAGTTCGTCTAAATTCCCCACTATAGCTGTAGGTTTGTGATGTATCGGATGCATTTGTGAAGAGCAAATGCCAGGTTTTAAGTGTTGGAACTAAAAAAAAAGA]
consensusID : consensus_11916#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 605 fasta sequence
[GTCATTTTACAAATAGAACTGATGTCGTCTCTGTCACCAAGGCAGTCTGGGTTTCAGTTCACGAAACAGATGTTACCTAAGCGTGCTTTTGCCCCATTAATCCTTATATTTGAGCTGCCTTTGTATGCAATTTTATATCTGGCATGTAACGACAGTGGCATCCGGAGAACGTCTTCATTGGATGTTCCTTTTTCATGTTCATTCTTGCCATGAGATTCATTGGAAGGAAGTACAAGAAACTCTTTTGGGTCTCTGCCATTGCACCTGTACTATCAGTTGCACTATCTACTCTGTTTGTCTATGCGACAAGAGCGGATAAGCACGGCGTGAAGATTATACAAAAAGTGAATTCAGGTATTAATGCAAGTTCTGTCGAGCAGATAGATCTCAAAGGAGGCTATGCTGCCGAATGTGCAAAGATTGCTCTTGTTTGTGCTGTGATTGCTCTGACGGAAGCTGTTGCTGTTGGCCGCTCTTTTTCAGCGATCAATGGATATCGGTTGGACGGAAATAAGGAAATGGTAGCAATGGGCTTCATGAATATAGCNNNNTCCTTATCATCATGCTATGTAGCAACAGGTTCATTCTCGNGNACAGCTGTGAAC]
[+] EMBL CF196843 [GTCATTTTACAAATAGAACTGATGTCGTCTCTGTCACCAAGGCAGTCTGGGTTTCAGTTCACGAAACAGATGTTACCTAAGCGTGCTTTTGCCCCATTAATCCTTATATTTGAGCTGCCTTTGTATGCAATTTTATATCTGGCATGTAACGACAGTGGCATCCGGAGAACGTCTTCATTGGATGTTCCTTTTTCATGTTCATTCTTGCCATGAGATTCATTGGAAGGAAGTACAAGAAACTCTTTTGGGTCTCTGCCATTGCACCTGTACTATCAGTTGCACTATCTACTCTGTTTGTCTATGCGACAAGAGCGGATAAGCACGGCGTGAAGATTATACAAAAAGTGAATTCAGGTATTAATGCAAGTTCTGTCGAGCAGATAGATCTCAAAGGAGGCTATGCTGCCGAATGTGCAAAGATTGCTCTTGTTTGTGCTGTGATTGCTCTGACGGAAGCTGTTGCTGTTGGCCGCTCTTTTTCAGCGATCAATGGATATCGGTTGGACGGAAATAAGGAAATGGTAGCAATGGGCTTCATGAATATAGCNNNNTCCTTATCATCATGCTATGTAGCAACAGGTTCATTCTCGNGNACAGCTGTGAAC]
[+] EMBL CF196541 [ AAATAGAACTGATGTCGTCTCTGTCACCAAGGCAGTCTGGGTTTCAGTTCACGAAACAGATGTTACCTAAGCGTGCTTTTGCCCCATTAATCCTTATATTTGAGCTGCCTTTGTATGCAATTTTATATCTGGCATGTAACGACAGTGGCATCCGGAGAACGTCTTCATTGGATGTTCCTTTTTCATGTTCATTCTTGCCATGAGATTCATTGGAAGGAAGTACAAGAAACTCTTTTGGGTCTCTGCCATTGCACCTGTACTATCAGTTGCACTATCTACTCTGTTTGTCTATGCGACAAGAGCGGATAAGCACGGCGTGAAGATTATACAAAAAGTGAATTCAGGTATTAATGCAAGTTCTGTCGAGCAGATAGATCTCAAAGGAGGCTATGCTGCCGAATGTGCAAAGATTGCTCTTGTTTGTGCTGTGATTGCTCTGACGGAAGCTGTTGCTGTTGGCCGCTCTTTTTCAGCGATCAATGGATATCGGTTGGACGGAAATNNNNNAATGGTAGCAATGGGCTTCATGAATATAGCNNNATCCTTATCATCATGCTATGTNNNANCAGGTTCAT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11916#0 TCACCTGAAGCACCTAAGGTTCACATGGACTTGCCATCCTCACAGCTCACCAATCTTGGA 60
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 GGCACCGATACATTGTGATGGAATTTCAGCCACTTCCTCAGGGAGTTCACCCAAACACTT 120
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 CAGAACCAGCCATGGAGCCCATGGCAAGTGAGTCATCTGTGCCCATAGGGACAGCTTTTG 180
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 CAGACTTGCTGCTGCAAGGGCCAGAGCACCCAAGCCTGTGGAATGATCTCACCGGCATGT 240
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 TCAGGAAGGCATTCCGTTGGCAAGGTGCAGACAAGCGCTTCACACTGTCTGTGTATGTGA 300
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 TGTCTGTTCTACAGGGTCTGTTTCCAATACTTGACTGGTGGAAAACCTACAATCTGAAAT 360
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 TCTTTCGAAGTGACCTCATGGCTGGCCTAACTCTTGCAAGCCTTAGCATTCCACAGAGCA 420
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 TTGGATATGCAACTCTGGCAAAACTGGATCCTCAGTATGGTCTTTATACAAGTGTTGTGC 480
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 CACCTCTTGTATATGCTGTGACGGGGTCCTCTAGGGAGATAGCCATTGGACCAGTTGCCA 540
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 TTGTGTCATTATTGCTTTCATCAATGATTCAGAAGATAGTTGACCCATCTGTTGATCCAG 600
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 CGTTCTACCGAAAAATGGTCTTTACCGTGACATTCCTTACTGGTGTCTTTCAGTTTGCAT 660
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 TTGGTCTGTTCAGACTGGGATTTCTTGTGGATTTTCTATCACATGCTGCTATCGTCGGGT 720
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 TCATGGGAGGAGCTGCTATTGTGATTGGATTACAGCAGCTGAAGGGGCTGCTTGGACTTA 780
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 GTCATTTTACAAATAGAACTGATGTCGTCTCTGTCACCAAGGCAGTCTGGGTTTCAGTTC 840
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 ACGAAACATGGCATCCGGAGAACGTCTTCATTGGATGTTCCTTTTTCATGTTCATTCTTG 900
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 CCATGAGATTCATTGGAAGGAAGTACAAGAAACTCTTTTGGGTCTCTGCCATTGCACCTG 960
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 TACTATCAGTTGCACTATCTACTCTGTTTGTCTATGCGACAAGAGCGGATAAGCACGGCG 1020
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 TGAAGATTATACAAAAAGTGAATTCAGGTATTAATGCAAGTTCTGTCGAGCAGATAGATC 1080
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 TCAAAGGAGGCTATGCTGCCGAATGTGCAAAGATTGCTCTTGTTTGTGCTGTGATTGCTC 1140
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 TGACGGAAGCTGTTGCTGTTGGCCGCTCTTTTTCAGCGATCAATGGATATCGGTTGGACG 1200
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 GAAATAAGGAAATGGTAGCAATGGGCTTCATGAATATAGCAGGATCCTTATCATCATGCT 1260
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 ATGTAGCAACAGGTTCATTCTCGCGCACAGCTGTGAACTTCGCTGCTGGTTGCAAGACAA 1320
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 CCGTTTCAAACATTATCATGGCTGCCACTGTGATGGTTGCCTTGGAGCTTCTCACAAAGC 1380
consensus_11916#1 ------------------------------------------------------------
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 TCCTGTACTACACACCTGTGTCCATCC-TTGCATCAATCATTCTGTCAGCTCTTCCAGGA 1439
consensus_11916#1 -TCGGATCAGTGGAGATTGGTCTTTCAGTTGCAGTACTGATCCC-TCATTTGATCTGAAG 58
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 TTGATCAATGTGCAGGAAGTCCGCTTCCTGTGGAAAGTCGACAAGATGGACTTCC-TCAC 1498
consensus_11916#1 TTTACTACTGTATTTTTTTTTTCATTTTGATTCATCAGAAGTATGTTGAAGTTTCATTTC 118
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 ATGCATGGGATCATTCCTTGGTGTTCTATTCGGATCAGTGGAGATTGGTCTTTCAGTTGC 1558
consensus_11916#1 TTGCATG----CATGCTT----ATGCAATTCTGATTTGGTGGAGCTCTTCTTGCAG---- 166
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 ACTTCTTGTTTCCTTTGCAAAGATCATTATACAGTCGATTTGGCCTCAAGTAGAGATTCT 1618
consensus_11916#1 -CTTCTTGTTTCCTTTGCAAAGATCATTATACAGTCGATTTGGCCTCAAGTAGAGATTCT 225
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 TGGGAGGCTTCAGGGCACAGAAATCTTCTGTAACGTCAAGCAGTATCCAGTGGTTCACGA 1678
consensus_11916#1 TGGGAGGCTTCAGGGCACAGAAATCTTCTGTAACGTCAAGCAGTATCCAGTGGTTCACGA 285
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 AACACCGACTGTACTGACCGTACGCATTGAAACATCATTCCTTTGCTTCGTCAACTCCAG 1738
consensus_11916#1 AACACCGACTGTACTGACCGTACGCATTGAAACATCATTCCTTTGCTTCGTCAACTCCAG 345
consensus_11916#2 -------------GTCATTTTACAAATAGAACTGATGT-CGTCTCTGTCACCAAGGCAGT 46
* * *** ** *** * * * * ** *** *
consensus_11916#0 TTCCATCAAAGAAAAGATCATGGGATGGGTAACCGATGAGCGCGAGGCATTTTGCTCGGT 1798
consensus_11916#1 TTCCATCAAAGAAAAGATCATGGGATGGGTAACCGATGAGCGCGAGGCATTTTGCTCGGT 405
consensus_11916#2 CTGGGTTTCA-----GTTCACGAAACAGATGTTACCTAAGCGTG----CTTTTGCCCCAT 97
* * * * *** * * * * * **** * ****** * *
consensus_11916#0 CGTTCTTGACATGTCAAATG---TGGTAAACATGGATACTTCAGGTCTTGTGGCGCTGGA 1855
consensus_11916#1 CGTTCTTGACATGTCAAATG---TGGTAAACATGGATACTTCAGGTCTTGTGGCGCTGGA 462
consensus_11916#2 TAATCCTTATATTTGAGCTGCCTTTGTATGCAATTTTATATCTGG-CATGTAACGACAGT 156
** * * ** * * ** * *** ** ** ** ** * *** ** *
consensus_11916#0 AGAA-CTGCACAAGGAGCTGGC---GTGTCTCGGCATCCAGATGGCTATAGCCA--AGCC 1909
consensus_11916#1 AGAA-CTGCACAAGGAGCTGGC---GTGTCTCGGCATCCAGATGGCTATAGCCA--AGCC 516
consensus_11916#2 GGCATCCGGAGAACGTCTTCATTGGATGTTCCTTTTTCATGTTCATTCTTGCCATGAGAT 216
* * * * * ** * * *** * ** * * * * **** **
consensus_11916#0 TGGATGGCAGGTGATCCACAAGATGAAACTGGCACGGCTCGTCGACGGAATCGGAGAAGG 1969
consensus_11916#1 TGGATGGCAGGTGATCCACAAGATGAAACTGGCACGGCTCGTCGACGGAATCGGAGAAGG 576
consensus_11916#2 TCATTGGAAGGAAGTACAAGAAACTCTTTTGG---GTCTCTGCCATTGCACCTGT-ACTA 272
* *** *** * ** * * *** * *** * * * * * * *
consensus_11916#0 ATGGTTCTTCCTCACGGTGGGCGAAGCCGTGGAAGCTTGCCTGGCAAACAAGGCGGGAAA 2029
consensus_11916#1 ATGGTTCTTCCTCACGGTGGGCGAAGCCGTGGAAGCTTGCCTGGCAAACAAGGCGGGAAA 636
consensus_11916#2 TCAGTTGCACTATCTACTCTGTTTGTCTATGCGACAAGAGCGGATAAGCACGGCGTGAAG 332
*** * * * * ** * * * ** ** **** ***
consensus_11916#0 CGCCCTGGAATGCTGCTGAATCGAATCCACCGTGTGCATGGTCTCTCCGGTGGTTGAATA 2089
consensus_11916#1 CGCCCTGGAATGCTGCTGAATCGAATCCACCGTGTGCATGGTCTCTCCGGTGGTTGAATA 696
consensus_11916#2 ATTATACAAAAAGTG--AATTCAGGT--ATTA-ATGCAAGTTCTGTCGAGCAGATAGATC 387
** ** * ** * * **** * *** ** * * * **
consensus_11916#0 AAGAGAGACACTAGTGCTTCGTGGTACGCTACAAAAGGATTGTGTTGTGTGCTAGTGCTG 2149
consensus_11916#1 AAGAGAGACACTAGTGCTTCGTGGTACGCTACAAAAGGATTGTGTTGTGTGCTAGTGCTG 756
consensus_11916#2 TCAAAGGAGGCTA-TGCTGCCGAATGTGCAA-AGATTGCTCTTGTT-TGTGCTGTGATTG 444
* ** *** **** * * ** * * * * * **** ****** **
consensus_11916#0 CACGATGATGCA-GCTTCAGCTGTAGTGTGGTGCTTCATGGATTGTGCGACGTGCAACTG 2208
consensus_11916#1 CACGATGATGCA-GCTTCAGCTGTAGTGTGGTGCTTCATGGATTGTGCGACGTGCAACTG 815
consensus_11916#2 CTC--TGACGGAAGCTGTTGCTGTTGGCCGCTCTTTTTCAG--CGATCAATGGATATCGG 500
* * *** * * *** ***** * * * ** * * * * * * * *
consensus_11916#0 TTGGGGGAAGACGAACTGTGTCTGTC--TGAACTT----AGTATGCCGAGTTCGTCTAAA 2262
consensus_11916#1 TTGGGGGAAGACGAACTGTGTCTGTC--TGAACTT----AGTATGCCGAGTTCGTCTAAA 869
consensus_11916#2 TTGGACGGAAATAAGGAAATGGTAGCAATGGGCTTCATGAATATAGCNNNNTCCTTATCA 560
**** * * * * * * ** *** * *** * ** * *
consensus_11916#0 TTCCCCACTATAGCTGTAGGTTTGTGATGTATCGGATGCATTTGTGAAGAGCAAATGCCA 2322
consensus_11916#1 TTCCCCACTATAGCTGTAGGTTTGTGATGTATCGGATGCATTTGTGAAGAGCAAATGCCA 929
consensus_11916#2 TCATGCTATGTAGCAACAGGTTCAT----TCTCGNGNACAGCTGTGAAC----------- 605
* * * **** ***** * * *** ** ******
consensus_11916#0 GGTTTTAAGTGTTGGAACTGATGATTGTGTAATATTATTATATTAATCGAGTTTGTATAA 2382
consensus_11916#1 GGTTTTAAGTGTTGGAACTAAAAAAAAAGA------------------------------ 959
consensus_11916#2 ------------------------------------------------------------
consensus_11916#0 TTAATTTGTACTCGAGTTTGTGCGTTTTGGCAAAATCCGAGCTAGTATGCTGCAAAATT 2441
consensus_11916#1 -----------------------------------------------------------
consensus_11916#2 -----------------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||