cluster # 11922

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Oryza sativa
cluster # 11922 cluster # 11922 Sequences # 9 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11922#0 length = 2925 sequences # 5

consensus_11922#1 length = 1174 sequences # 4

consensusID : consensus_11922#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2925
fasta sequence

                              [TACTTTATTCCTTGGAAGATTGTTGGGTGGTCTTCTTCACATGAGCTGTATCCTCTGTAGTTCATAAAACATATATATAATATACCATCATTGTTTTCACGATAATGTTCTTTCTTTGTAGATCATTCAATAAAGTGTGTTTGATGATCATTGATAAATTCAATTAAGGTTCATACCTTGATAATTGTAATTATAGTTTATTGTTTCATAGACATAATTTTTACTAGCTTATTCCCACATTGAGCAACACTTTGCTTAATATCAATCAACCCAGTTCAACTTGTTTTAATGTTTGCAGTATCTGAAACCACATGATCATGGGAAGCTTTCTCAAGTTGAGCTCCTTGTCATTGATGAAGCTGCTGCTATTCCATTGCCGATTGTTAAGTCCTTGCTTGGTCCATACCTTGTTTTCCTATCATCCACTGTCAATGGGTACGAAGGAACTGGGCGATCCTTGTCTTTGAAGCTCCTACAGCAGTTGGAATCCCAAAGCCAGCCATCTGCTCCAAGTAATGGACCCAATTCAAGTAGGCTTTTTAAGAAAATTGAATTAAATGAGTCCATTAGGTATGCATCTGGTGATCCTATTGAGAGCTGGCTTAACGATTTACTTTGTTTGGATCTTGCGAACTCCATCCCCAATATCAGTAGGCTACCTCATCCAAAAGAATGTGATCTTTATTATGTCAACCGAGACACACTTTTCTCATATCATAAGGAGAGTGAGATATTTTTACAGCGGATGATGGCACTTTATGTTGCTTCCCATTACAAAAATTCACCCAATGACTTGCAACTAATGGCTGATGCGCCAGCTCATCACCTATTTGTATTGCTTGGCCCAGTCGATGAGTCTAAAAATCAGCTCCCGGATATTCTATGTGTAGTCCAGGTCTGTTTGGAAGGTCAAATATCTCGAAAATCAGCTATGAAAAGCCTAAGTGAGGGTCGGTCACCTTCTGGTGATCAAATACCATGGAAATTTTGTGAACAGTTTCAAGACAACGTGTTTCCAAGTCTCTCAGGAGCTCGGATTGTACGAATTGCTGTCCATCCAAGTGCTGTGAGGCTTGGATATGGTTCAGCTGCTGTGGACCTTTTGACAAGGTACTATGAAGGGCAAATGACTCTATTTGCTGAGGATGAGGAGGAAAATGAAGAGCCTGAAGTCAGGATCACTGAGGCTGCAGAGAAGGCTTCTCTACTAGAAGAGACCGTAAAGCCTAGGGCAAATCTCCCACCACTCCTTGTCCATCTTCGCGAACGTCGTCCTGAAAAGCTCCATTATCTTGGTGTATCTTTTGGACTTACACAAGAGCTTTTCCGTTTTTGGCGGAAGCACAACTTCTATCCATTCTATGTGGGCCAAATTCCTAGTGCTGTGACTGGTGAGCATACTTGTATGGTCTTGAGGCCCTTAAATAGCGATGACATTGAAGTTAATGAGTCAAGCAAATGTGGATTTTTGGATCCATTTTATCAAGATTTCAGACAAAGATTCAGGCGTCTCTTAGGAACATCTTTCCGGCATCTCAATTTTAAGCTTGCAATGAGTGTATTGGCTTCCAAGATTGATTTTTCAGATCACGAACCCTCAGACTATTATACCAATATTACCTCAAAGATATTGGGAGATATGCTATCACCACATGATATGAAGCGGCTGGAAGCATATTCTAACAATTTGGTCGATTATCATCTGATTCTGGACCTTGTCCCTATTCTTGCACACCAGTATTTTTCAGAGAAGCTTCCTGTTACACTACAT-GGTGCCCAAGCAGCTGTTTTGTTCTGTATGGGACTACAAGACAAAGACATAGGTGCTACAAAGGAAGAACTGGGGATAGAGAGGGAACAGGTTCTATCAAACTTCATCAAGACAATGAAGAAGTTATACGGTTACCTTCATAATATTGCAGGAAAAGAAATTGAAGCAACATTACCACGACTAAAGGAAATTGATACAGCTCCTCTTAAATCATTGGATGAGGACCTTGATGAAGCAGCCAGGGAAGTAAAGGAACAAAGAAGAGCAATAGATGAGGATGATGTGGACCCAAAGTTTCTGCAAAAGTATGCAATTGATGCCGATGACGATGAGATTGAGAAGGCGCTGAACGGAGGAAAGATTTCCGCAAGCGGTGTTATCAGTGTGAAATCCAACAAGACAAAGGCTGACAAGCAAGAGAAGCGCAAAGAAATGAAGAAATCAAAAAGGAAAGGAAATGATGGAGAGAAATCTGAGTCTAAGAAGAAGAGGTCTTGAATCATCAATTTAAATTAGCACTTCCAGAAAGTTGACCTCGGTAGCTTGTGAAACTCACGAGAAACAAGTTGACCTCGGTGGCTCGTAAAACTTACCAGAAAAACTCCCTGTGCATGCTGAGGAAGCCCTGCTAACACAAAGCCTCGAAAACGTGTTCATCTCACAAGGGGGGCTCAAAGGAGCAGACAAGTTCTCCAGAAAACATCTGGCACCAGCAGCCATCAATTTTGATGTTTCAATTTCTTAGAATATTACTATAGTTTTGCTGTATCCTCACTGTAGCACAGTTAATTTTGTTATGGAAGAAAATTGCAGCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGGTTTCCCCTTCCCAAACGTTTTTTTAAAAAAAGGGGCAAATTCCGGGCCCCAAAAATAAATTCCCCCTTAAGGGGGGCGTTTAAAAAATAACGGGCCCGGTTTTAAAAACCGGGGAAAGGGAAAAACCCGGGGGTACCCCAAATAAAACCCTTTGGAAAAAAACCCCTTTTTCCCAAGGGGGGAAAAAAAAAAAAGGCCCCCCCCAATCCC]

[+] EMBL CB622606             [TACTTTATTCCTTGGAAGATTGTTGGGTGGTCTTCTTCACATGAGCTGTATCCTCTGTAGTTCATAAAACATATATATAATATACCATCATTGTTTTCACGATAATGTTCTTTCTTTGTAGATCATTCAATAAAGTGTGTTTGATGATCATTGATAAATTCAATTAAGGTTCATACCTTGATAATTGTAATTATAGTTTATTGTTTCATAGACATAATTTTTACTAGCTTATTCCCACATTGAGCAACACTTTGCTTAATATCAATCAACCCAGTTCAACTTGTTTTAATGTTTGCAGTATCTGAAACCACATGATCATGGGAAGCTTTCTCAAGTTGAGCTCCTTGTCATTGATGAAGCTGCTGCTATTCCATTGCCGATTGTTAAGTCCTTGCTTGGTCCATACCTTGTTTTCCTATCATCCACTGTCAATGGGTACGAAGGAACTGGGCGATCCTTGTCTTTGAAGCTCCTACAGCAGTTGGAATCCCAAAGCCAGCCATCTGCTCCAAGTAATGGACCCAATTCAAGTAGGCTTTTTAAGAAAATTGAATTAAATGAGTCCATTAGGTATGCATCTGGTGATCCTATTGAGAGCTGGCTTAACGATTTACTTTGTTTGGATCTTGCGAACTCCATCCCCAATATCAGTAGGCTACCTCATCCAAAAGAATGTGATCTTTATTATGTCAACCGAGACACACTTTTCTCATATCATAAGGAGAGTGAGATATTTTTACAGCGGATGATGGCACTTTATGTTGCTTCCCATTACAAAAATTCACCCAATGACTTGCAACTAATGGCTGATGCGCCAGCTCATCACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AK058272             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TATGTTGCTTCCCATTACAAAAATTCACCCAATGACTTGCAACTAATGGCTGATGCGCCGGCTCATCACCTATTTGTATTGCTTGGCCCAGTCGATGAGTCTAAAAATCAGCTCCCGGATATTCTATGTGTAGTCCAGGTCTGTTTGGAAGGTCAAATATCTCGAAAATCAGCTATGAAAAGCCTAAGTGAGGGTCGGTCACCTTCTGGTGATCAAATACCATGGAAATTTTGTGAACAGTTTCAAGACAACGTGTTTCCAAGTCTCTCAGGAGCTCGGATTGTACGAATTGCTGTCCATCCAAGTGCTGTGAGGCTTGGATATGGTTCAGCTGCTGTGGACCTTTTGACAAGGTACTATGAAGGGCAAATGACTCTATTTGCTGAGGATGAGGAGGAAAATGAAGAGCCTGAAGTCAGGATCACTGAGGCTGCAGAGAAGGCTTCTCTACTAGAAGAGACCGTAAAGCCTAGGGCAAATCTCCCACCACTCCTTGTCCATCTTCGCGAACGTCGTCCTGAAAAGCTCCATTATCTTGGTGTATCTTTTGGACTTACACAAGAGCTTTTCCGTTTTTGGCGGAAGCACAACTTCTATCCATTCTATGTGGGCCAAATTCCTAGTGCTGTGACTGGTGAGCATACTTGTATGGTCTTGAGGCCCTTAAATAGCGATGACATTGAAGTTAATGAGTCAAGCAAATGTGGATTTTTGGATCCATTTTATCAAGATTTCAGACAAAGATTCAGGCGTCTCTTAGGAACATCTTTCCGGCATCTCAATTTTAAGCTTGCAATGAGTGTATTGGCTTCCAAGATTGATTTTTCAGATCACGAACCCTCAGACTATTATACCAATATTACCTCAAAGATATTGGGAGATATGCTATCACCACATGATATGAAGCGGCTGGAAGCATATTCTAACAATTTGGTCGATTATCATCTGATTCTGGACCTTGTCCCTATTCTTGCACACCAGTATTTTTCAGAGAAGCTTCCTGTTACACTACAT GGTGCCCAAGCAGCTGTTTTGTTCTGTATGGGACTACAAGACAAAGACATAGGTGCTACAAAGGAAGAACTGGGGATAGAGAGGGAACAGGTTCTATCAAACTTCATCAAGACAATGAAGAAGTTATACGGTTACCTTCATAATATTGCAGGAAAAGAAATTGAAGCAACATTACCACGACTAAAGGAAATTGATACAGCTCCTCTTAAATCATTGGATGAGGACCTTGATGAAGCAGCCAGGGAAGTAAAGGAACAAAGAAGAGCAATAGATGAGGATGATGTGGACCCAAAGTTTCTGCAAAAGTATGCAATTGATGCCGATGACGATGAGATTGAGAAGGCGCTGAACGGAGGAAAGATTTCCGCAAGCGGTGTTATCAGTGTGAAATCCAACAAGACAAAGGCTGACAAGCAAGAGAAGCGCAAAGAAATGAAGAAATCAAAAAGGAAAGGAAATGATGGAGAGAAATCTGAGTCTAAGAAGAAGAGGTCTTGAATCATCAATTTAAATTAGCACTTCCAGAAAGTTGACCTCGGTAGCTTGTGAAACTCACGAGAAACAAGTTGACCTCGGTGGCTCGTAAAACTTACCAGAAAAACTCCCTGTGCATGCTGAGGAAGCCCTGCTAACACAAAGCCTCGAAAACGTGTTCATCTCACAAGGGGGGCTCAAAGGAGCAGACAAGTTCTCCAGAAAACATCTGGCACCAGCAGCCATCAATTTTGATGTTTCAATTTCTTAGAATATTACTATGGTTTTGCTGTATCCTCACTGTAGCACAGTTAATTTTGTTATGGAAGAAA                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C72357               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGACTGGTGAGCATACTTGTATGGTCTTGAGGCCCTTAAATAGCGATGACATTGAAGTTAATGAGTCAAGCAAATGTGGATTTTTGGATCCATTTTATCAAGATTTCAGACAAAGATTCAGGCGTCTCTTAGGAACATCTTTCCGGCATCTCAATTTTAAGCTTGCAATGAGTGTATTGGCTTCCAAGATTGATTTTTCAGATCACGAACCCTCAGACTATTATACCAATATTACCTCAAAGATATTGGGAGATATGCTATCACCACATGATATGAAGCGGCTGGAAGCATATTCTAACAATTTGGTCGATTATCATCTGATTCTGGACCTTGTCCCTATTCTTGCACACCAGTATTTTTCAGAGAAGCNTCCTGGTACACTACATGGGNGCCCAAGCAGCTGTTTGGTCCTGTATGGGNCTACAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CA756605             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGTTATACGGTTACCTTCATAATATTGCAGGAAAAGAAATTGAAGCAACATTACCACGACTAAAGGAAATTGATACAGCTCCTCTTAAATCATTGGATGAGGACCTTGATGAAGCAGCCAGGGAAGTAAAGGAACAAAGAAGAGCAATAGATGAGGATGATGTGGACCCAAAGTTTCTGCAAAAGTATGCAATTGATGCCGATGACGATGAGATTGAGAAGGCGCTGAACGGAGGAAAGATTTCCGCAAGCGGTGTTATCAGTGTGAAATCCAACAAGACAAAGGCTGACAAGCAAGAGAAGCGCAAAGAAATGAAGAAATCAAAAAGGAAAGGAAATGATGGAGAGAAATCTGAGTCTAAGAAGAAGAGGTCTTGAATCATCAATTTAAATTAGCACTTCCAGAAAGTTGACCTCGGTAGCTTGTGAAACTCACGAGAAACAAGTTGACCTCGGTGGCTCGTAAAACTTACCAGAAAAACTCCCTGTGCATGCTGAGGAAGCCCTGCTAACACAAAGCCTCGAAAACGTGTTCATCTCACAAGGGGGGCTCAAAGGAGCAGACAAGTTCTCCAGAAAACATCTGGCACCAGCAGCCATCAATTTTGATGTTTCAATTTCTTAGAATATTACTATAGTTTTGCTGTATCCT                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF321480             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CAGAAAACATCTGGCACCAGCAGCCATCAATTTTGATGTTTCAATTTCTTAGAATATTACTATAGTTTTGCTGTATCCTCACTGTAGCACAGTTAATTTTGTTATGGAAGAAAATTGCAGCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGGTTTCCCCTTCCCAAACGTTTTTTTAAAAAAAGGGGCAAATTCCGGGCCCCAAAAATAAATTCCCCCTTAAGGGGGGCGTTTAAAAAATAACGGGCCCGGTTTTAAAAACCGGGGAAAGGGAAAAACCCGGGGGTACCCCAAATAAAACCCTTTGGAAAAAAACCCCTTTTTCCCAAGGGGGGAAAAAAAAAAAAGGCCCCCCCCAATCCC]




>consensus_11922#0
TACTTTATTCCTTGGAAGATTGTTGGGTGGTCTTCTTCACATGAGCTGTATCCTCTGTAG
TTCATAAAACATATATATAATATACCATCATTGTTTTCACGATAATGTTCTTTCTTTGTA
GATCATTCAATAAAGTGTGTTTGATGATCATTGATAAATTCAATTAAGGTTCATACCTTG
ATAATTGTAATTATAGTTTATTGTTTCATAGACATAATTTTTACTAGCTTATTCCCACAT
TGAGCAACACTTTGCTTAATATCAATCAACCCAGTTCAACTTGTTTTAATGTTTGCAGTA
TCTGAAACCACATGATCATGGGAAGCTTTCTCAAGTTGAGCTCCTTGTCATTGATGAAGC
TGCTGCTATTCCATTGCCGATTGTTAAGTCCTTGCTTGGTCCATACCTTGTTTTCCTATC
ATCCACTGTCAATGGGTACGAAGGAACTGGGCGATCCTTGTCTTTGAAGCTCCTACAGCA
GTTGGAATCCCAAAGCCAGCCATCTGCTCCAAGTAATGGACCCAATTCAAGTAGGCTTTT
TAAGAAAATTGAATTAAATGAGTCCATTAGGTATGCATCTGGTGATCCTATTGAGAGCTG
GCTTAACGATTTACTTTGTTTGGATCTTGCGAACTCCATCCCCAATATCAGTAGGCTACC
TCATCCAAAAGAATGTGATCTTTATTATGTCAACCGAGACACACTTTTCTCATATCATAA
GGAGAGTGAGATATTTTTACAGCGGATGATGGCACTTTATGTTGCTTCCCATTACAAAAA
TTCACCCAATGACTTGCAACTAATGGCTGATGCGCCAGCTCATCACCTATTTGTATTGCT
TGGCCCAGTCGATGAGTCTAAAAATCAGCTCCCGGATATTCTATGTGTAGTCCAGGTCTG
TTTGGAAGGTCAAATATCTCGAAAATCAGCTATGAAAAGCCTAAGTGAGGGTCGGTCACC
TTCTGGTGATCAAATACCATGGAAATTTTGTGAACAGTTTCAAGACAACGTGTTTCCAAG
TCTCTCAGGAGCTCGGATTGTACGAATTGCTGTCCATCCAAGTGCTGTGAGGCTTGGATA
TGGTTCAGCTGCTGTGGACCTTTTGACAAGGTACTATGAAGGGCAAATGACTCTATTTGC
TGAGGATGAGGAGGAAAATGAAGAGCCTGAAGTCAGGATCACTGAGGCTGCAGAGAAGGC
TTCTCTACTAGAAGAGACCGTAAAGCCTAGGGCAAATCTCCCACCACTCCTTGTCCATCT
TCGCGAACGTCGTCCTGAAAAGCTCCATTATCTTGGTGTATCTTTTGGACTTACACAAGA
GCTTTTCCGTTTTTGGCGGAAGCACAACTTCTATCCATTCTATGTGGGCCAAATTCCTAG
TGCTGTGACTGGTGAGCATACTTGTATGGTCTTGAGGCCCTTAAATAGCGATGACATTGA
AGTTAATGAGTCAAGCAAATGTGGATTTTTGGATCCATTTTATCAAGATTTCAGACAAAG
ATTCAGGCGTCTCTTAGGAACATCTTTCCGGCATCTCAATTTTAAGCTTGCAATGAGTGT
ATTGGCTTCCAAGATTGATTTTTCAGATCACGAACCCTCAGACTATTATACCAATATTAC
CTCAAAGATATTGGGAGATATGCTATCACCACATGATATGAAGCGGCTGGAAGCATATTC
TAACAATTTGGTCGATTATCATCTGATTCTGGACCTTGTCCCTATTCTTGCACACCAGTA
TTTTTCAGAGAAGCTTCCTGTTACACTACATGGTGCCCAAGCAGCTGTTTTGTTCTGTAT
GGGACTACAAGACAAAGACATAGGTGCTACAAAGGAAGAACTGGGGATAGAGAGGGAACA
GGTTCTATCAAACTTCATCAAGACAATGAAGAAGTTATACGGTTACCTTCATAATATTGC
AGGAAAAGAAATTGAAGCAACATTACCACGACTAAAGGAAATTGATACAGCTCCTCTTAA
ATCATTGGATGAGGACCTTGATGAAGCAGCCAGGGAAGTAAAGGAACAAAGAAGAGCAAT
AGATGAGGATGATGTGGACCCAAAGTTTCTGCAAAAGTATGCAATTGATGCCGATGACGA
TGAGATTGAGAAGGCGCTGAACGGAGGAAAGATTTCCGCAAGCGGTGTTATCAGTGTGAA
ATCCAACAAGACAAAGGCTGACAAGCAAGAGAAGCGCAAAGAAATGAAGAAATCAAAAAG
GAAAGGAAATGATGGAGAGAAATCTGAGTCTAAGAAGAAGAGGTCTTGAATCATCAATTT
AAATTAGCACTTCCAGAAAGTTGACCTCGGTAGCTTGTGAAACTCACGAGAAACAAGTTG
ACCTCGGTGGCTCGTAAAACTTACCAGAAAAACTCCCTGTGCATGCTGAGGAAGCCCTGC
TAACACAAAGCCTCGAAAACGTGTTCATCTCACAAGGGGGGCTCAAAGGAGCAGACAAGT
TCTCCAGAAAACATCTGGCACCAGCAGCCATCAATTTTGATGTTTCAATTTCTTAGAATA
TTACTATAGTTTTGCTGTATCCTCACTGTAGCACAGTTAATTTTGTTATGGAAGAAAATT
GCAGCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAACCCCTGGTTTCCCCTTCCCAAACGTTTTTTTAAAAAAAGGGGCAAATTCCGG
GCCCCAAAAATAAATTCCCCCTTAAGGGGGGCGTTTAAAAAATAACGGGCCCGGTTTTAA
AAACCGGGGAAAGGGAAAAACCCGGGGGTACCCCAAATAAAACCCTTTGGAAAAAAACCC
CTTTTTCCCAAGGGGGGAAAAAAAAAAAAGGCCCCCCCCAATCCC

consensusID : consensus_11922#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1174
fasta sequence

                              [CCGGGCAGGAAAAAAGCTTCCTGTTACACTACATGGTGCTCAAGCAGCTGTTTTGTTTTGTGTGGGACTACAAGACAAAGACATAGGTGCTACAAAGAAAGAACTGGGGATAGAGAGGGAACAGGTTCTATCAAACTTCATCAAGACAATGAAGAAGTTATACGGTTACTTTCATAATATTGCAGGAAAAGAAATTGAAGCAACATTACCACGATTAAAGG-AATTGATACAGCTCCTCTT-AAATCATTGGATGAGGACCTTGATGAAGCAG-CCAGGGAAGTAAAGGAACAAAGAAGAGCAATAGATGAGGGTGATGTGGACCCAAAGTTTCTGCAAAAGTATGCAATTGATGCCGATGACGATGAGATTGAGAAGGCGCTGAACGGAGGAAAGATTTCCGCAAGCGGTGTTATCAGTGTGAAATCCAACAAGACAAAGGCTGACAAGCAAGAGAAGCGCAAAGAAATGAAGAAATCAAAAAGGAAAGGAAATGATGGAGAGAAATCTGAGTCTAAGAAGAAGAGGTCTTGAATCATCAATTTAAATTAGCACTTCCAGAAAGTTGACCTCGGTAGATTTTGAAACTCACGAGAAACAAGTTGACCTCGGTGGCTCGTAAAACTTACCAGAAAAACTCCCTTTGCATTCTGAGGAAGCCCTGCTAACACAAAGCCTCGAAAACGTGTTCATCTCACTAGGGGGGCTCAAAGGAGCAGACAAGTTCTCCAGAAAACATCTGGCACCAGCAGCCATCAATTTTGATGTTTCAATTTCTTAGAATGTTACTATAGTTTTGCTGTATCTTCACTGTAGCACAGTTAATTTTGTTATGGAAGAAAATTGCAGCTTACTTGTTTGCTGAGTGTGGGAAATCCTTGCTACATATAGGATTTTATTCCTATATTGCTTGCGCTTTTTGGGGTCCAGTGGGCATTTATCCTTAAGAAATGCCCTGGTTCGTTATTGTAAGAGTTTCAAACGACCAAAGAACGGCCGTGTGCGATACAATCATACAACATGGTGATGGTGTGTGTGTGTGTTTTTTTTTAATTTATAAATGCAAGGTTAATTGTCTGTTGCTAGATTTGTACTAAGATTATGAAATTACAATTACAAAACAAGGAATGACTGCAATTGCAAAGACATCCTGATAAAAAAAAAGGAAATTATTATG]

[-] EMBL AW069932             [CCGGGCAGGAAAAAAGCTTCCTGTTACACTACATGGTGCTCAAGCAGCTGTTTTGTTTTGTGTGGGACTACAAGACAAAGACATAGGTGCTACAAAGAAAGAACTGGGGATAGAGAGGGAACAGGTTCTATCAAACTTCATCAAGACAATGAAGAAGTTATACGGTTACTTTCATAATATTGCAGGAAAAGAAATTGAAGCAACATTACCACGATTAAAGGAAATTGATACAGCTCCTCTT AAATCATTGGATGAGGACCTTGATGAAGCAG CCAGGGAAGTAAAGGAACAAAGAAGAGCAATAGATGAGGGTGATGTGGACCCAAAGTTTCTGCAAAAGTATGCAATTGATGCCGATGACGATGAGATTGAGAAGGCGCTGAACGGAGGAAAGATTTCCGCAAGCGGTGTTATCAGTGTGAAATCCAACAAGACAAAGGCTGACAAGCGAGAGAAGCGCAAAGAAATGAAGAAATCAAAAAGGAAAGGAAATGATGGAGAGAAATCTGAGTCTAAGAAGAAGAGGTCTTGAATCATCAATTTAAATTAGCACTTCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU100707             [                                                                                                                                                                                                                         AAGG AATTGATACAGCTCCTCTTAAAATCATTGGATGAGGNCNTTGATGAACCAGCCCAGGGAAGTAAAGGAACAAAGAAGAGCAATAGATGAGGATGATGTGGACCCAAAGTTTCTGCAAAAGTATGCAATTGATGCCGATGACGATGAGATTGAGAAGGCGCTGAACGGAGGAAAGATTTCCGCAAGCGGTGTTATCAGTGTGAAATCCAACAAGACAAAGGCTGACAAGCAAGAGAAGCGCAAAGAAATGAAGAAATCAAAAAGGAAAGGAAATGATGGAGAGAAATCTGAGTCTAAGAAGAAGAGGTCTTGAATCATCAATTTAAATTAGCACTTCCAGAAAGTTGACCTCGGTAGCTTGTGAAACTCACGAGAAACAAGTTGACCTCGGTGGCTCGTAAAACTTACCAGAAAAACTCCCTGTGCATGCTGAGGAAGCCCTGCTAACACAAAGCCTCGAAAACGTGTTCATCTCACAAGGGGGGCTCAAAGGAGCAGACAAGTTCTCCAGAAAACATCTGGCACCAGCAGCCATCAATTTTGATGTTTCAATTTCTTAGAATATTACTATAGTTTTGCTGTATCCTCACTGTAGCACAGTTAATTTTGTTATGGAAGAAAATTGCAGCTTACTTGTTTGCTaaaaaa                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB622607             [                                                                                                                                                                                                                                                                                                                                                                                GATTGAGAAGGCGCTGAACGGAGGAAAGATTTCCGCAAGCGGTGTTATCAGTGTGAAATCCAACAAGACAAAGGCTGATAAGCAAGAGAAGCGCAAAGAAATGAAGAAATCAAAAAGGAAAGGAAATGATGGAGAGAAATCCGAGTCTAAGAAGAAGAGGTCTTGAATCATCAAGTAAAATTAGCACTTCCAGAAAGTTGACCTCGGTAGATTTTGAAACTCACGAGAAACAAGTTGACCTCGGTGGCTCGTAAAACTTACCAGAAAAACTCCCTTTGCATTCTGAGGAAGCCCTGCTAACACAAAGCCTCGAAAACGTGTTCATCTCACTAGGGGGGCTCAAAGGAGCAGACAAGTTCTCCAGAAAACATCTGGCACCAGCAGCCATCAATTTTGATGTTTCAATTTCTTAGAATGTTACTATAGTTTTGCTGTATCTTCACTGTAGCACAGTTAATTTTGTTATGGAAGAAAATTGCAGCTTACTTGTTTGCTGAGTGTGGGAAATCCTTGCTACATATAGGATTTTATTCCTATATTGCTTGCGCTTTTTGGGGTCCAGTGGGCATTTATCCTTAAGAAATGCCCTGGTTCGTTATTGTAAGAGTTTCAAACGACCAAAGAACGGCCGTGTGCGATACAATCATACAACATGGTGATGGTGTGTGTGTGTGTTTTTTTTTAATTTATAAATGCAAGGTTAATTGTCTGTTGCTAGATTTGTACTAAGATTATGAAATTACAATTACAAAACAAGGAATGACTGCAATTGCAAAGACATCCTGATAAAAAAAAAGGAAATTATTATG]
[-] EMBL CB618055             [                                                                                                                                                                                                                                                                                                                                                                                 ATTGAGAAGGCGCTGAACGGAGGAAAGATTTCCGCAAGCGGTGTTATCAGTGTGAAATCCAACAAGACAAAGGCTGATAAGCAAGAGAAGCGCAAAGAAATGAAGAAATCAAAAAGGAAAGGAAATGATGGAGAGAAATCCGAGTCTAAGAAGAAGAGGTCTTGAATCATCAAGTAAAATTAGCACTTCCAGAAAGTTGACCTCGGTAGATTTTGAAACTCACGAGAAACAAGTTGACCTCGGTGGCTCGTAAAACTTACCAGAAAAACTCCCTTTGCATTCTGAGGAAGCCCTGCTAACACAAAGCCTCGAAAACGTGTTCATCTCACTAGGGGGGCTCAAAGGAGCAGACAAGTTCTCCAGAAAACATCTGGCACCAGCAGCCATCAATTTTGATGTTTCAATTTCTTAGAATGTTACTATAGTTTTGCTGTATCTTCACTGTAGCACAGTTAATTTTGTTATGGAAGAAAATTGCAGCTTACTTGTTTGCTGAGTGTGGGAAATCCTTGCTACATATAGGATTTTATTCCTATATTGCTTGCGCTTTTTGGGGTCCAGTGGGCATTTATCCTTAAGAAATGCCCTGGTTCGTTATTGTAAGAGTTTCAAACGACCAAAGAACGGCCGTGTGCGATACAATCATACAACATGGTGATGGTGTGTGTGTGTGTTTTTTTTTAATTTATAAATGCAAGGTTAATTGTCTGTTGCTAGATTTGTACTAAGATTATGAAATTACAATTACAAAACAAGGAATGACTGCAATTGCAAAAGCATCCTGATAAAAAAAAAG            ]




>consensus_11922#1
CCGGGCAGGAAAAAAGCTTCCTGTTACACTACATGGTGCTCAAGCAGCTGTTTTGTTTTG
TGTGGGACTACAAGACAAAGACATAGGTGCTACAAAGAAAGAACTGGGGATAGAGAGGGA
ACAGGTTCTATCAAACTTCATCAAGACAATGAAGAAGTTATACGGTTACTTTCATAATAT
TGCAGGAAAAGAAATTGAAGCAACATTACCACGATTAAAGGAATTGATACAGCTCCTCTT
AAATCATTGGATGAGGACCTTGATGAAGCAGCCAGGGAAGTAAAGGAACAAAGAAGAGCA
ATAGATGAGGGTGATGTGGACCCAAAGTTTCTGCAAAAGTATGCAATTGATGCCGATGAC
GATGAGATTGAGAAGGCGCTGAACGGAGGAAAGATTTCCGCAAGCGGTGTTATCAGTGTG
AAATCCAACAAGACAAAGGCTGACAAGCAAGAGAAGCGCAAAGAAATGAAGAAATCAAAA
AGGAAAGGAAATGATGGAGAGAAATCTGAGTCTAAGAAGAAGAGGTCTTGAATCATCAAT
TTAAATTAGCACTTCCAGAAAGTTGACCTCGGTAGATTTTGAAACTCACGAGAAACAAGT
TGACCTCGGTGGCTCGTAAAACTTACCAGAAAAACTCCCTTTGCATTCTGAGGAAGCCCT
GCTAACACAAAGCCTCGAAAACGTGTTCATCTCACTAGGGGGGCTCAAAGGAGCAGACAA
GTTCTCCAGAAAACATCTGGCACCAGCAGCCATCAATTTTGATGTTTCAATTTCTTAGAA
TGTTACTATAGTTTTGCTGTATCTTCACTGTAGCACAGTTAATTTTGTTATGGAAGAAAA
TTGCAGCTTACTTGTTTGCTGAGTGTGGGAAATCCTTGCTACATATAGGATTTTATTCCT
ATATTGCTTGCGCTTTTTGGGGTCCAGTGGGCATTTATCCTTAAGAAATGCCCTGGTTCG
TTATTGTAAGAGTTTCAAACGACCAAAGAACGGCCGTGTGCGATACAATCATACAACATG
GTGATGGTGTGTGTGTGTGTTTTTTTTTAATTTATAAATGCAAGGTTAATTGTCTGTTGC
TAGATTTGTACTAAGATTATGAAATTACAATTACAAAACAAGGAATGACTGCAATTGCAA
AGACATCCTGATAAAAAAAAAGGAAATTATTATG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11922#0      TACTTTATTCCTTGGAAGATTGTTGGGTGGTCTTCTTCACATGAGCTGTATCCTCTGTAG 60
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      TTCATAAAACATATATATAATATACCATCATTGTTTTCACGATAATGTTCTTTCTTTGTA 120
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      GATCATTCAATAAAGTGTGTTTGATGATCATTGATAAATTCAATTAAGGTTCATACCTTG 180
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      ATAATTGTAATTATAGTTTATTGTTTCATAGACATAATTTTTACTAGCTTATTCCCACAT 240
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      TGAGCAACACTTTGCTTAATATCAATCAACCCAGTTCAACTTGTTTTAATGTTTGCAGTA 300
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      TCTGAAACCACATGATCATGGGAAGCTTTCTCAAGTTGAGCTCCTTGTCATTGATGAAGC 360
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      TGCTGCTATTCCATTGCCGATTGTTAAGTCCTTGCTTGGTCCATACCTTGTTTTCCTATC 420
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      ATCCACTGTCAATGGGTACGAAGGAACTGGGCGATCCTTGTCTTTGAAGCTCCTACAGCA 480
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      GTTGGAATCCCAAAGCCAGCCATCTGCTCCAAGTAATGGACCCAATTCAAGTAGGCTTTT 540
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      TAAGAAAATTGAATTAAATGAGTCCATTAGGTATGCATCTGGTGATCCTATTGAGAGCTG 600
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      GCTTAACGATTTACTTTGTTTGGATCTTGCGAACTCCATCCCCAATATCAGTAGGCTACC 660
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      TCATCCAAAAGAATGTGATCTTTATTATGTCAACCGAGACACACTTTTCTCATATCATAA 720
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      GGAGAGTGAGATATTTTTACAGCGGATGATGGCACTTTATGTTGCTTCCCATTACAAAAA 780
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      TTCACCCAATGACTTGCAACTAATGGCTGATGCGCCAGCTCATCACCTATTTGTATTGCT 840
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      TGGCCCAGTCGATGAGTCTAAAAATCAGCTCCCGGATATTCTATGTGTAGTCCAGGTCTG 900
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      TTTGGAAGGTCAAATATCTCGAAAATCAGCTATGAAAAGCCTAAGTGAGGGTCGGTCACC 960
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      TTCTGGTGATCAAATACCATGGAAATTTTGTGAACAGTTTCAAGACAACGTGTTTCCAAG 1020
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      TCTCTCAGGAGCTCGGATTGTACGAATTGCTGTCCATCCAAGTGCTGTGAGGCTTGGATA 1080
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      TGGTTCAGCTGCTGTGGACCTTTTGACAAGGTACTATGAAGGGCAAATGACTCTATTTGC 1140
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      TGAGGATGAGGAGGAAAATGAAGAGCCTGAAGTCAGGATCACTGAGGCTGCAGAGAAGGC 1200
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      TTCTCTACTAGAAGAGACCGTAAAGCCTAGGGCAAATCTCCCACCACTCCTTGTCCATCT 1260
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      TCGCGAACGTCGTCCTGAAAAGCTCCATTATCTTGGTGTATCTTTTGGACTTACACAAGA 1320
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      GCTTTTCCGTTTTTGGCGGAAGCACAACTTCTATCCATTCTATGTGGGCCAAATTCCTAG 1380
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      TGCTGTGACTGGTGAGCATACTTGTATGGTCTTGAGGCCCTTAAATAGCGATGACATTGA 1440
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      AGTTAATGAGTCAAGCAAATGTGGATTTTTGGATCCATTTTATCAAGATTTCAGACAAAG 1500
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      ATTCAGGCGTCTCTTAGGAACATCTTTCCGGCATCTCAATTTTAAGCTTGCAATGAGTGT 1560
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      ATTGGCTTCCAAGATTGATTTTTCAGATCACGAACCCTCAGACTATTATACCAATATTAC 1620
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      CTCAAAGATATTGGGAGATATGCTATCACCACATGATATGAAGCGGCTGGAAGCATATTC 1680
consensus_11922#1      ------------------------------------------------------------
                                                                                   

consensus_11922#0      TAACAATTTGGTCGATTATCATCTGATTCTGGACCTTGTCCCTATTCTTGCACACCAGTA 1740
consensus_11922#1      ---------------------------------------------------------CCG 3
                                                                                   

consensus_11922#0      TTTTTCAGAGAAGCTTCCTGTTACACTACATGGTGCCCAAGCAGCTGTTTTGTTCTGTAT 1800
consensus_11922#1      GGCAGGAAAAAAGCTTCCTGTTACACTACATGGTGCTCAAGCAGCTGTTTTGTTTTGTGT 63
                             * * ************************** ***************** *** *

consensus_11922#0      GGGACTACAAGACAAAGACATAGGTGCTACAAAGGAAGAACTGGGGATAGAGAGGGAACA 1860
consensus_11922#1      GGGACTACAAGACAAAGACATAGGTGCTACAAAGAAAGAACTGGGGATAGAGAGGGAACA 123
                       ********************************** *************************

consensus_11922#0      GGTTCTATCAAACTTCATCAAGACAATGAAGAAGTTATACGGTTACCTTCATAATATTGC 1920
consensus_11922#1      GGTTCTATCAAACTTCATCAAGACAATGAAGAAGTTATACGGTTACTTTCATAATATTGC 183
                       ********************************************** *************

consensus_11922#0      AGGAAAAGAAATTGAAGCAACATTACCACGACTAAAGGAAATTGATACAGCTCCTCTTAA 1980
consensus_11922#1      AGGAAAAGAAATTGAAGCAACATTACCACGATTAAAGGAA-TTGATACAGCTCCTCTTAA 242
                       ******************************* ******** *******************

consensus_11922#0      ATCATTGGATGAGGACCTTGATGAAGCAGCCAGGGAAGTAAAGGAACAAAGAAGAGCAAT 2040
consensus_11922#1      ATCATTGGATGAGGACCTTGATGAAGCAGCCAGGGAAGTAAAGGAACAAAGAAGAGCAAT 302
                       ************************************************************

consensus_11922#0      AGATGAGGATGATGTGGACCCAAAGTTTCTGCAAAAGTATGCAATTGATGCCGATGACGA 2100
consensus_11922#1      AGATGAGGGTGATGTGGACCCAAAGTTTCTGCAAAAGTATGCAATTGATGCCGATGACGA 362
                       ******** ***************************************************

consensus_11922#0      TGAGATTGAGAAGGCGCTGAACGGAGGAAAGATTTCCGCAAGCGGTGTTATCAGTGTGAA 2160
consensus_11922#1      TGAGATTGAGAAGGCGCTGAACGGAGGAAAGATTTCCGCAAGCGGTGTTATCAGTGTGAA 422
                       ************************************************************

consensus_11922#0      ATCCAACAAGACAAAGGCTGACAAGCAAGAGAAGCGCAAAGAAATGAAGAAATCAAAAAG 2220
consensus_11922#1      ATCCAACAAGACAAAGGCTGACAAGCAAGAGAAGCGCAAAGAAATGAAGAAATCAAAAAG 482
                       ************************************************************

consensus_11922#0      GAAAGGAAATGATGGAGAGAAATCTGAGTCTAAGAAGAAGAGGTCTTGAATCATCAATTT 2280
consensus_11922#1      GAAAGGAAATGATGGAGAGAAATCTGAGTCTAAGAAGAAGAGGTCTTGAATCATCAATTT 542
                       ************************************************************

consensus_11922#0      AAATTAGCACTTCCAGAAAGTTGACCTCGGTAGCTTGTGAAACTCACGAGAAACAAGTTG 2340
consensus_11922#1      AAATTAGCACTTCCAGAAAGTTGACCTCGGTAGATTTTGAAACTCACGAGAAACAAGTTG 602
                       ********************************* ** ***********************

consensus_11922#0      ACCTCGGTGGCTCGTAAAACTTACCAGAAAAACTCCCTGTGCATGCTGAGGAAGCCCTGC 2400
consensus_11922#1      ACCTCGGTGGCTCGTAAAACTTACCAGAAAAACTCCCTTTGCATTCTGAGGAAGCCCTGC 662
                       ************************************** ***** ***************

consensus_11922#0      TAACACAAAGCCTCGAAAACGTGTTCATCTCACAAGGGGGGCTCAAAGGAGCAGACAAGT 2460
consensus_11922#1      TAACACAAAGCCTCGAAAACGTGTTCATCTCACTAGGGGGGCTCAAAGGAGCAGACAAGT 722
                       ********************************* **************************

consensus_11922#0      TCTCCAGAAAACATCTGGCACCAGCAGCCATCAATTTTGATGTTTCAATTTCTTAGAATA 2520
consensus_11922#1      TCTCCAGAAAACATCTGGCACCAGCAGCCATCAATTTTGATGTTTCAATTTCTTAGAATG 782
                       *********************************************************** 

consensus_11922#0      TTACTATAGTTTTGCTGTATCCTCACTGTAGCACAGTTAATTTTGTTATGGAAGAAAATT 2580
consensus_11922#1      TTACTATAGTTTTGCTGTATCTTCACTGTAGCACAGTTAATTTTGTTATGGAAGAAAATT 842
                       ********************* **************************************

consensus_11922#0      GCAGCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA--AGGAAAAA 2638
consensus_11922#1      GCAGCTTACTTGTTTGCTGAGTGTGGGAAATCCTTGCTACATATAGGATTTTATTCCTAT 902
                       ********           *       ***        * * * *  *    *     * 

consensus_11922#0      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2698
consensus_11922#1      ATTGCTTGCGCTTTTTGGGGTCCAGTGGGCATTTATCCTTAAGAAATGCCCTGGTTCGTT 962
                       *                      *      *   *     ** ***              

consensus_11922#0      AAAAAAAAAACCCCTGGTTTCCCCTTCCCAAACGTTTTTTTAAAAAAAGGGGCAAATTCC 2758
consensus_11922#1      ATTGTAAGAGTTTCAAACGACCAAAGAACGGCCGTGTGCG-ATACAATCATACAACATGG 1021
                       *    ** *    *      **      *   *** *    * * **     ***  *  

consensus_11922#0      GGGCCCCAAAAATAAATTCCCCCTTAAGGGGGGCGTTTAAAAAATAACGGGCCCGGTTTT 2818
consensus_11922#1      TGATGGTGTGTGTGTGTGTTTTTTTTTAATTTATAAATGCAAGGTTAATTGTCTGTTGCT 1081
                        *          *   *      **            *  **  * *   * * * *  *

consensus_11922#0      AAAAACCGGGGAAAGGGAAAAACCCGGGGGTACCCCAAATAAAACCCTTTGGAAAAAAAC 2878
consensus_11922#1      AGATTTGTACTAAGATTATGAAATTACAATTACAAAACAAGGAATGACTGCAATTGCAAA 1141
                       * *        **    *  **        ***   * *   **    *   *    ** 

consensus_11922#0      CCCTTTTTCCCAAGGGGGGAAAAAAAAAAAAGGCCCCCCCCAATCCC 2925
consensus_11922#1      GACATCCTGATAAAAAAAAAGGAAATTATTATG-------------- 1174
                         * *  *   **      *  ***  *  * *