cluster # 11931

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Oryza sativa
cluster # 11931 cluster # 11931 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11931#0 length = 879 sequences # 9
consensusID : consensus_11931#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 879
fasta sequence
                              [CAGCTTGCCTATGAAGCCGTCTTCTTCTTTAAAAAAATGTAGAGGCTACATCCACTTATTCACGTATGTCCCATTCTGAAGTTCCACTTATTCACGTATGTCCCATTCTGAAGTGCAAATTACAAGAACATAAACTTCTATGAAGTCCAGATCAACATCACCATCTCGAACTATACACTTCAGAGAAATTATTGTAACCTATCTTGACAGGAAGTAGTTGCAAATGTACACCTATCTTTGCGTATAGTGTGTTTGGCTGTCCATCTGTAGTAGTTCCATTGGAAAACCCCATAACTACCTGATGGTAGCGTGGAGTCATTCATTCCCAGAAGACCGTGCATTTGCCTCAATCCAGTCAAAAG-CGAGTGGGCTAAGGAAGGCATCTGGGATTCCGAAGGAACTGACAATAGCAAGTGCGTGGGGCCTGAGTTCACTGCACAGTGTCATCACTTCTTTCCTAGCAGCGGCTACATTCTCTCGCGATAGGCAACCATATCTCAAAAAGGATGCAGATTCGTCTATGCAAACCATAACATATAAAGACCTTAGTAAGCCCAATATATCCTTTAAAGAACCAGTAGGAATATTCTTCTCATCCTCCAAAAATATTTGCAAAATTGTGCGCTCAGTAAATGCTCTAGCTAAGTCTTCAGCGAGTTGGTAGCTCAGCATCAAAGCCTTCTCTCTGTTTTCTCCTTGTGCCAGATAGTTAGAAACCTCCGTGGTGAATCGTTTCAGTAAATCTCGCTCCCTCAAGCAGAGCAAGTCCATCTGGAAACTGGAGCTTCTTAGTGTGCCACTTGTCAGATAATCAGGAATAAC-AGGGCAAGGACCATTCAAGTGTTCCAAGCCCAATCCCTTGAATGGTTGATTCTTCCT]

[+] EMBL CB666502             [CAGCTTGCCTATGAAGCCGTCTTCTTCTTTAAAAAAATGTAGAGGCTACATCCACTTATTCACGGATGTCCCATTCTGAAGTTCCACTTATTCACGTATGTCCCATTCTGAAGTGCAAATTACAAGAACATAAACTTCTATGAAGTCCAGATCAACATCACCATCTCGAACTATACACTTCAGAGAAATTATTGTAACCTATCTTGACAGGAAGTAGGTGCAAATGTACACCTATCTTTGCGTATAGTGTGTTTGGCTGTCCATCTGTAGTAGTTCCATTGGAAAACCCCATAACTACCTGATGGTAGCGTGGAGTCATTCATTCCCAGAAGACCGTGCATTTGCCTCAATCCAGTCAAAAG CGAGTGGGCTAAGGAAGGCATCTGGGATTCCGAAGGAACTGACAATAGCAAGTGCGTGGGGCCTGAGTTCACTGCACAGTGTCATCACTTCTTTCCTAGCAGCGGCTACATTCTCTCGCGATAGGCAACCATATCTCAAAAAGGATGCAGATTCTTCTATGCAAACCATAACATATAAAGACCTTAGTAAGCCCAATATATCCTTTAAAGAACCAGTAGGAATATTCTTCTCATCCTCCAAAAATATTTGCAAAATTGTGCGCTCAGTAAATGCTCTAGCTAAGTCTTCAGCGAGTTGGTAGCTCAGCATCAAAGCCTTCTCTCTGTTTTCTCCTTGTGCCAGATAGTTAGAAACCTCCGTGGTGAATCGTTTCAGTAAATCTCGCTCCCTCAAGCAGAGCAAGTCCATCTGGAAACTGGAGCTTCTTAGTGTGCCACTTGTCAGATAATCAGGAATAAC AGGGCAAGGg                                               ]
[+] EMBL CB666457             [CAGCTTGGCTATGAAGCCGTCTTCTTCTTTAAAAAAATGTAGAGGCTACATCCACTTATTCACGTATGTCCCATTCTGAAGTTCCACTTATTCACGTATGTCCCATTCTGAAGTGCAAATTACAAGAACATAAACTTCTATGAAGTCCAGATCAACATCACCATCTCGAACTATACACTTCAGAGAAATTATTGTAACCTATCTTGACAGGAAGTAGTTGCAAATGTACACCTATCTTTGCGTATAGTGTGTTTGGCTGTCCATCTGTAGTAGTTCCATTGGAAAACCCCATAACTACCTGATGGTAGCGTGGAGTCATTCATTCCCAGAAGACCGTGCATTTGCCTCAATCCAGTCAAAAG CGAGTGGGCTAAGGAAGGCATCTGGGATTCCGAAGGAACTGACAATAGCAAGTGCGTGGGGCCTGAGTTCACTGCACAGTGTCATCACTTCTTTCCTAGCAGCGGCTACATTCTCTCGCGATAGGCAACCATATCTCAAAAAGGATGCAGATTCGTCTATGCAAACCATAACATATAAAGACCTTAGTAAGCCCAATATATCCTTTAAAGAACCAGTAGGAATATTCTTCTCATCCTCCAAAAATATTTGCAAAATTGTGCGCTCAGTAAATGCTCTAGCTAAGTCTTCAGCGAGTTGGTAGCTCAGCATCAAAGCCTTCTCTCTGTTTTCTCCTTGTGCCAGATAGTTAGAAACCTCCGTGGTGAATCGTTTCAGTAAATCTCGCTCCCTCAAGCAGAGCAAGTCCATCTGGAAACTGGAGCTTCTTAGTGTGCCACTTG                                                                             ]
[+] EMBL CB662239             [                                AAAAATGTAGAGGCTACATCCACTTATTCACGTATGTCCCATTCTGAAGTTCCACTTATTCACGTATGTCCCATTCTGAAGTGCAAATTACAAGAACATAAACTTCTATGAAGTCCAGATCAACATCACCATCTCGAACTATACACTTCAGAGAAATTATTGTAACCTATCTTGACAGGAAGTAGTTGCAAATGTACACCTATCTTTGCGTATAGTGTGTTTGGCTGTCCATCTGTAGTAGTTCCATTGGAAAACCCCATAACTACCTGATGGTAGCGTGGAGTCATTCATTCCCAGAAGACCGTGCATTTGCCTCAATCCAGTCAAAAG CGAGTGGGCTAAGGAAGGCATCTGGGATTCCGAAGGAACTGACAATAGCAAGTGCGTGGGGCCTGAGTTCACTGCACAGTGTCATCACTTCTTTCCTAGCAGCGGCTACATTCTCTCGCGATAGGCAACCATATCTCAAAAAGGATGCAGATTCGTCTATGCAAACCATAACATATAAAGACCTTAGTAAGCCCAATATATCCTTTAAAGAACCAGTAGGAATATTCTTCTCATCCTCCAAAAATATTTGCAAAATTGTGCGCTCAGTAAATGCTCTAGCTAAGTCTTCAGCGAGTTGGTAGCTCAGCATCAAAGCCTTCTCTCTGTTTTCTCCTTGTGCCAGATAGTTAGAAACCTCCGTGGTGAATCGTTTCAGTAAATCTCGCTCCCTCAAGCAGAGCAAGTCCATCTGGAAACTGGAGCTTCTTAGTGTGCCACTTGTCAGATAATCAGGAATAACNAGGGC AGGACCATTCAAGTGTTCCAAGCCC ATCCCTTGAATGGTTGATTCTc   ]
[-] EMBL AA752520             [                                           GGCTACACCCACTTATTCACGTATG CCCATTCTGAAG TCCACTTATTCACGTATGTCCCATTCTGAAGTGCAAATTACAAGAACATAAACTTCTATGAAGTCCAGATCAACATCACCATCTCGAACTATACACTTCAGAGAAATTATTGTAACCTATCTTGACAGGAAGTAGTTGCAAATGTACACCTATCTTTGCGTATAGTGTGTTTGGCTGTCCATCTGTAGTAGTTCCATTGGHAYACCCCATAACTACCTGATGGTAGCGTGGAGTCATTCATTCCCAGAAGACCGTGCATTTGCCTCAATCCAGTCAAAAG CGAGTGGGCTAAGGAAGGCATCTGGGATTCCGAAGGAACTGACAATAGCAAGTGCGTGGGGCCTGAGTTCACTGCACAGTGTCATCACTTCTTTCCTAGCAGCGGCTACATTCTCTCGCGATAGGCAACCATATCTCAAAAAGGATGCAGATTCGTC                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL BI118860             [                                                                                                                                                                                                                                             TTGCGTATAGTGTGTTTGGCTGTCCATCTGTAGTAGTTCCATTGGAAAACCCCATAACTACCTGATGGTAGCGTGGAGTCATTCATTCCCAGAAGACCGTGCATTTGCCTCAATCCAATCAAAAGCCAAGTGGGCTAAGGGAGGCATCTGGGATTCCGAAGGAACTGACAATAGCAAGTGCGTGGGGCCTGAGTTCACTGCACAGTGTCATCACTTCTTTCCTAGCAGCGGCTACATTCTCTCGCGATAGGC ACCATATCTCAAAAAGGATGCAGATTCGTCTATGCAAACCATAACATATAAAGACCTTAGTAAGCCCAATATATCCTTTAAAGAACCAGTAGGAATATTCTTCTCATCCTCCAAAAATATTTGCAAAATTGTGCGCTCAGTAAATGCTCTAGCTAAGTCTTCAGCGAGTTGGTAGCTCAGCATCAAAGCCTTCTCTCTGTTTTCTCCTTGTGCCAGATAATTAGAAACCTCCGTGGTGAATCGTTTCAGTAAATCTCGCTCCCTCAAGCAGAGCAAGTCCATCTGGAAACTGGAGCTTCTTAGTGTGCCACTTGTCAGATAATCAGGAATAAC AGGGCAAGGACCATTCAAGTGTTCCAAGCCCAATCCCTTGAATGGTTGATTCTTCCT]
[-] EMBL CA999449             [                                                                                                                                                                                                                                                                                                                             ATTCATTCCCAGAAGACCGTGCATTTGCCTCAATCCAGTCAAAAG CGAGTGGGCTAAGGAAGGCATCTGGGATTCCGAAGGAACTGACAATAGCAAGTGCGTGGGGCCTGAGTTCACTGCACAGTGTCATCACTTCTTTCCTAGCAGCGGCTACATTCTCTCGCGATAGGCAACCATATCTCAAAAAGGATGCAGATTCGT                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB666458             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATTGTGCGCTCAGTAAATGCTCTAGCTAAGTCTTCAGCGAGTTGGTAGCTCAGCATCAAAGCCTTCTCTCTGTTTTCTCCTTGTGCCAGATAGTTAGAAACCTCCGTGGTGAATCGTTTCAGTAAATCTCGCTCCCTCAAGCAGAGCAAGTCCATCTGGAAACTGGAGCTTCTTAGTGTGCCACTTGTCAGATAATCAGGAATAAC AGGGCAAGGACCATTCAAGTGTTCCAAGCCCAATCCCTTGAATGGTTGATTCTTCCT]
[-] EMBL CB666503             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCAGCATCAAAGCCTTCTCTCTGTTTTCTCCTTGTGCCAGATAGTTAGAAACCTCCGTGGTGAATCGTTTCAGTAAATCTCGCTCCCTCAAGCAGAGCAAGTCCATCTGGAAACTGGAGCTTCTTAGTGTGCCACTTGTCAGATAATCAGGAATAAC AGGGCAAGGACCATTCAAGTGTTCCAAGCCCAATCCCTTGAATGGTTGATTCTTCCT]
[-] EMBL CB662240             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GAAACATCGGTGGTGAATCGTTTCAGTAAATCTCGCTCCCTCAAGCAGAGCAAGTCCATCTGGAAACTGGAGCTTCTTAGTGTGCCACTTGTCAGATAATCAGGAATAAC AGGGCAAGGACCATTCAAGTGTTCCAAGCCCAATCCCTTGAATGGTTGATTCTTCCT]




>consensus_11931#0
CAGCTTGCCTATGAAGCCGTCTTCTTCTTTAAAAAAATGTAGAGGCTACATCCACTTATT
CACGTATGTCCCATTCTGAAGTTCCACTTATTCACGTATGTCCCATTCTGAAGTGCAAAT
TACAAGAACATAAACTTCTATGAAGTCCAGATCAACATCACCATCTCGAACTATACACTT
CAGAGAAATTATTGTAACCTATCTTGACAGGAAGTAGTTGCAAATGTACACCTATCTTTG
CGTATAGTGTGTTTGGCTGTCCATCTGTAGTAGTTCCATTGGAAAACCCCATAACTACCT
GATGGTAGCGTGGAGTCATTCATTCCCAGAAGACCGTGCATTTGCCTCAATCCAGTCAAA
AGCGAGTGGGCTAAGGAAGGCATCTGGGATTCCGAAGGAACTGACAATAGCAAGTGCGTG
GGGCCTGAGTTCACTGCACAGTGTCATCACTTCTTTCCTAGCAGCGGCTACATTCTCTCG
CGATAGGCAACCATATCTCAAAAAGGATGCAGATTCGTCTATGCAAACCATAACATATAA
AGACCTTAGTAAGCCCAATATATCCTTTAAAGAACCAGTAGGAATATTCTTCTCATCCTC
CAAAAATATTTGCAAAATTGTGCGCTCAGTAAATGCTCTAGCTAAGTCTTCAGCGAGTTG
GTAGCTCAGCATCAAAGCCTTCTCTCTGTTTTCTCCTTGTGCCAGATAGTTAGAAACCTC
CGTGGTGAATCGTTTCAGTAAATCTCGCTCCCTCAAGCAGAGCAAGTCCATCTGGAAACT
GGAGCTTCTTAGTGTGCCACTTGTCAGATAATCAGGAATAACAGGGCAAGGACCATTCAA
GTGTTCCAAGCCCAATCCCTTGAATGGTTGATTCTTCCT
clustalw multiple alignements is not computed in this case