These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11945#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2778 fasta sequence [TTCCTCTTCCTCGATAACAAACGCAGCCAACCTCCGCTGGAGCCCGCCCGACCTCCGCCTCTCCTACCTTCTCCGGCACAGGAACCGACCGCCAGCCGTCGACCGGTCGGAGGGCTCCGCCTCGTCCAGATCTGGCCGCTGCTTCCCTCGGCGGCTCGTCGGATCCTGCTGAATCTCGCGTCGGCGTCGGCGTCAGCGGAGGGAACTCAGGAGGGGATCGGTGCTTCGCGTATTGGGGGGGCCTCGATGGTCTCCCTCCCCAACGCCGCTCCGACCGTCTCCTCCCCGCGTGGCCCGACGAGGCTCGCGGGCATGGCCGACGAAGGGACGAGTGCTCTCGCCGGGGCATGACCGACGCCGGCGTTGGACGGGAAACCTCCGAGCTTGCGAATTCGATGCACAGGCTCGGTGAAGAACGGGTTCGACAGGAACTCCACCGGCTGGTTGCCTGGTTGCCGTCCCGGCCTCAACCAAACCAAGCCTAGCCTAGCCTAGCCTGACGCGAGTTCCTCTCGCATTCGGAAGAAGAGGGGGTGGGGTTCACTGGAGGAAGTTCATTGGAGTTTATTGGGGGTAAGGAGAACAGCCTTCCAGCATCTCGCGTTTCCAGGATGCTGTCCAGTGAGCTTCCGCAGGAGCTGCATTTTATTAATTTTGTACTTAAAATGGGGAAGTATCTAATGTGCAAAAGGACAACACCGAAACCTACTCATGGTAAAGAAATAAGTGAGAAAGGGAAGTCAAATCTTCAATTTAAAGACCTCCCGGCAGTATCTTCTCTTCCCCATTTTGTGTTCATATTGAATTATGTACTGGATTTCTTAACTTGAAGGTATGTTGTTCTTTCAATTCAGGATTTGATATGCACAATTTTATCAAAATTGCCTCAGAAAGAGGCAATAAGGACTAGTGTTTTATCAAGTAAGTGGAGATCCATGTGGACGCTTCGCTCAAAAATATCTCTTGATGGTGGAGCAGTGTGTGGTAGTCGCAGGCGTGGTCAAAATAAATATTGTCAGAGATTCATTAATAATGTTGAAAAAGTTCTACAGAATTATCAAGGAAAGATGGTGGAAGCATTTGGAATTAAGTTTGAATTTGACAGCATTCTAGTTGATAATCTGAATAAGTGGGTTAGTTTTGCTGTGTCAGCGAGGACAAAACATCTATCTTTTGATTTAGTGCCTATTAGATTTGCTCGTTGTGACGATCGGTTCATATTTCCATTTGAACTTTTAGACAGTGGAAGCATTTGCCGTCTACAACATCTTCAATTTAGCTTTA-TCTCTTTGCAACCACCTTCCTGGTTCGGAGGTTTCCCAAACCTAAGGAAGCTTGAGCTTAATTTGGTGCATGTTACAAG-AAAGGAACTTGAGAACATGTTGTGCAACTGTTGCTGTCTTGAGTGGTTGAGCATGGTCAGATGCCATCTGAAGGATGACCTTAGGGTAGATCGTCCGATGTCCCATTTAGCCTACCTGCTTATTAGTTGCTGTGTCATAACCAAGATAGAGCTCCACGCTACAAAACTCTCTACCTTTATATATGAGGGTGAATTTGTTCCAATTGTCCTCAATCATACGTCAAAGCTGGTCAATGCACACATTTTCATTTTTGACGCCATTTTTCACCATGTTGTTGCTTCCCTTTTCCATGGCCTTCCAAATGTCCACAAGCTGACATTATGTATTCCTGATCTACAACTGGAGGTTTTCCCTTTCAACAACTGTGAACTAAAAATTCAGTTTTCCTAGCACTGTTTGGAGAATGATATTTGTTTTTTTTTTAATCTTTCAGAATCTATGGTCGTTAGATAACTCACTGAAGTTTTCCTGTCTCAAACACATACAATTGTTTGCGCACATATTATCTCATGGTTCCGACAAAATTCTGTACTTAGCTTATGTCATGAGGGCTGCACCCTTCGTTGAAAAGGTGGAAGTGCATTTTGCTAGCGGTCATAGCCTATGGTTTGCACAAGAAGGCCCCCTTAGACATGAACTTGGGCACGATGAATACAAATATCTGAAGAACCTTTGTGTTACAGGATTCAAAGGGGCTAGAGGACAACTTGAGTTTCTTTTACATGTTGTGGAAAATGCAACTGCACTAGACGTTATAACTGTGGATACAACTGAAAGAATGTTGGAAAGTGACATTAAGAACGACTATCTCTGCAGTATTGCTCGTCAGACTATCGAACTTCATATCCGCGAGGCACTCCCACCGAAGGCGAAGCTCTTTGTTCTTTAGGCTCTGCCAAAAAGTCTTTAAGCATGCATTTAGCGGAATGTAGTGGTGTGCTCCCCCCCACCCTCGATCCGTATGATGTGCCCGGCTATTCAAATGCATGTCTAGGTGAAGATGTGAGGATTGGGACAGGGGATTTCTAGATTTTTGTGTGTGTGTGTGTGTGTAAATTCTACTGAAAGGGGATAAAGTTCGATTGTTCTGTCGCAGTTTCGGTTTCTGGATATATCTGATGCTGTCTTTGTGGTTATAATGCCTAATAGCAGAAAACCTGTCTTCTGACAAACTTGAAAAGGTTGTATATACGACTGTTTCAGTTGTACAATCCAGTTTTCTATTTCCAGTTCTATTTGGGAATTCTACTATCATGTATGTGTACTACTGAATTCAGCAATAGTAGGTAAAAACAAATGAACTGCAGTATATGTCTTGGACTACCTTGTCAGTTTTTTCTTAATCGTGTAACGTTGACCAATAACCATGTATGCATGTCGACATGCCAATAAATGTTCTACCAGTGTAGACAGT] [+] EMBL AK073019 [TTCCTCTTCCTCGATAACAAACGCAGCCAACCTCCGCTGGAGCCCGCCCGACCTCCGCCTCTCCTACCTTCTCCGGCACAGGAACCGACCGCCAGCCGTCGACCGGTCGGAGGGCTCCGCCTCGTCCAGATCTGGCCGCTGCTTCCCTCGGCGGCTCGTCGGATCCTGCTGAATCTCGCGTCGGCGTCGGCGTCAGCGGAGGGAACTCAGGAGGGGATCGGTGCTTCGCGTATTGGGGGGGCCTCGATGGTCTCCCTCCCCAACGCCGCTCCGACCGTCTCCTCCCCGCGTGGCCCGACGAGGCTCGCGGGCATGGCCGACGAAGGGACGAGTGCTCTCGCCGGGGCATGACCGACGCCGGCGTTGGACGGGAAACCTCCGAGCTTGCGAATTCGATGCACAGGCTCGGTGAAGAACGGGTTCGACAGGAACTCCACCGGCTGGTTGCCTGGTTGCCGTCCCGGCCTCAACCAAACCAAGCCTAGCCTAGCCTAGCCTGACGCGAGTTCCTCTCGCATTCGGAAGAAGAGGGGGTGGGGTTCACTGGAGGAAGTTCATTGGAGTTTATTGGGGGTAAGGAGAACAGCCTTCCAGCATCTCGCGTTTCCAGGATGCTGTCCAGTGAGCTTCCGCAGGAGCTGCATTTTATTAATTTTGTACTTAAAATGGGGAAGTATCTAATGTGCAAAAGGACAACACCGAAACCTACTCATGGTAAAGAAATAAGTGAGAAAGGGAAGTCAAATCTTCAATTTAAAGACCTCCCGGCAGTATCTTCTCTTCCCCATTTTGTGTTCATATTGAATTATGTACTGGATTTCTTAACTTGAAGGTATGTTGTTCTTTCAATTCAGGATTTGATATGCACAATTTTATCAAAATTGCCTCAGAAAGAGGCAATAAGGACTAGTGTTTTATCAAGTAAGTGGAGATCCATGTGGACGCTTCGCTCAAAAATATCTCTTGATGGTGGAGCAGTGTGTGGTAGTCGCAGGCGTGGTCAAAATAAATATTGTCAGAGATTCATTAATAATGTTGAAAAAGTTCTACAGAATTATCAAGGAAAGATGGTGGAAGCATTTGGAATTAAGTTTGAATTTGACAGCATTCTAGTTGATAATCTGAATAAGTGGGTTAGTTTTGCTGTGTCAGCGAGGACAAAACATCTATCTTTTGATTTAGTGCCTATTAGATTTGCTCGTTGTGACGATCGGTTCATATTTCCATTTGAACTTTTAGACAGTGGAAGCATTTGCCGTCTACAACATCTTCAATTTAGCTTTA TCTCTTTGCAACCACCTTCCTGGTTCGGAGGTTTCCCAAACCTAAGGAAGCTTGAGCTTAATTTGGTGCATGTTACAAG AAAGGAACTTGAGAACATGTTGTGCAACTGTTGCTGTCTTGAGTGGTTGAGCATGGTCAGATGCCATCTGAAGGATGACCTTAGGGTAGATCGTCCGATGTCCCATTTAGCCTACCTGCTTATTAGTTGCTGTGTCATAACCAAGATAGAGCTCCACGCTACAAAACTCTCTACCTTTATATATGAGGGTGAATTTGTTCCAATTGTCCTCAATCATACGTCAAAGCTGGTCAATGCACACATTTTCATTTTTGACGCCATTTTTCACCATGTTGTTGCTTCCCTTTTCCATGGCCTTCCAAATGTCCACAAGCTGACATTATGTATTCCTGATCTACAACTGGAGGTTTTCCCTTTCAACAACTGTGAACTAAAAATTCAGTTTTCCTAGCACTGTTTGGAGAATGATATTTGTTTTTTTTTTAATCTTTCAGAATCTATGGTCGTTAGATAACTCACTGAAGTTTTCCTGTCTCAAACACATACAATTGTTTGCGCACATATTATCTCATGGTTCCGACAAAATTCTGTACTTAGCTTATGTCATGAGGGCTGCACCCTTCGTTGAAAAGGTGGAAGTGCATTTTGCTAGCGGTCATAGCCTATGGTTTGCACAAGAAGGCCCCCTTAGACATGAACTTGGGCACGATGAATACAAATATCTGAAGAACCTTTGTGTTACAGGATTCAAAGGGGCTAGAGGACAACTTGAGTTTCTTTTACATGTTGTGGAAAATGCAACTGCACTAGACGTTATAACTGTGGATACAACTGAAAGAATGTTGGAAAGTGACATTAAGAACGACTATCTCTGCAGTATTGCTCGTCAGACTATCGAACTTCATATCCGCGAGGCACTCCCACCGAAGGCGAAGCTCTTTGTTCTTTAGGCTCTGCCAAAAAGTCTTTAAGCATGCATTTAGCGGAATGTAGTGGTGTGCTCCCCCCCACCCTCGATCCGTATGATGTGCCCGGCTATTCAAATGCATGTCTAGGTGAAGATGTGAGGATTGGGACAGGGGATTTCTAGATTTTTGTGTGTGTGTGTGTGTGTAAATTCTACTGAAAGGGGATAAAGTTCGATTGTTCTGTCGCAGTTTCGGTTTCTGGATATATCTGATGCTGTCTTTGTGGTTATAATGCCTAATAGCAGAAAACCTGTCTTCTGACAAACTTGAAAAGGTTGTATATACGACTGTTTCAGTTGTACAATCCAGTTTTCTATTTCCAGTTCTATTTGGGAATTCTACTATCATGTATGTGTACTACTGAATTCAGCAATAGTAGGTAAAAACAAATGAACTGCAGTATATGTCTTGGACTACCTTGTCAGTTTTTTCTTAATCGTGTAACGTTGACCAATAACCATGTATGCATGTCGACATGCCAATAAATGTTCTACCAGTGTAGACAGT] [+] EMBL CB627504 [ GGGGGGCCTCGATGGTCTCCCTCCCCAACGCCGCTCCGACCGTCTCCTCCCCGCGTGGCCCGACGAGGCTCGCGGGCATGGCCGACGAAGGGACGAGTGCTCTCGCCGGGGCATGACCGACGCCGGCGTTGGACGGGAAACCTCCGAGCTTGCGAATTCGATGCACAGGCTCGGTGAAGAACGGGTTCGACAGGAACTCCACCGGCTGGTTGCCTGGTTGCCGTCCCGGCCTCAACCAAACCAAGCCTAGCCTAGCCTAGCCTGACGCGAGTTCCTCTCGCATTCGGAAGAAGAGGGGGTGGGGTTCACTGGAGGAAGTTCATTGGAGTTTATTGGGGGTAAGGAGAACAGCCTTCCAGCATCTCGCGTTTCCAGGATGCTGTCCAGTGAGCTTCCGCAGGAGCTGCATTTTATTAATTTTGTACTTAAAATGGGGAAGTATCTAATGTGCAAAAGGACAACACCGAAACCTACCCATGGTAAAGAAATAAGTGAGAAAGGGAAGTCAAATCTTCAATTTGAAGACCTCCCGGCAGTATCTTCTCTTCCCCATTTTGTGTTCATATTGAATTATGTACTGGATTTCTTAACTTGAAGGTATGTTGTTCTTTCAATTCAGGATTTGATATGCACAATTTTATCAAAATTGCCTCAGAAAGAGGCAATAAGGACTAGTGTTTTATCAAGTAAGTGGAGATCCATGTGGACGCTTCGCTCAAAAATA ] [+] EMBL CB637315 [ AACTTGAAGGTATGTTGTTCTTTCAATTCAGGATTTGATATGCACAATTTTATCAAAATTGCCTCAGAAAGAGGCAATAAGGACTAGTGTTTTATCAAGTAAGTGGAGATCCATGTGGACGCTTCGCTCAAAAATATCTCTTGATGGTGGAGCAGTGTGTGGTAGTCGCAGGCGTTGTCTAAATAAATATTGTCAGAGATTCATTAATAATGTTGAAAAAGTTCTACAGAATTATCAAGGAAAGATGGTGGAAGCATTTGGAATTAAGTTTGAATTTGACAGCATTCTAGTTGATAATCTGAATAAGTGGGTTAGTTTTGCTGTGTCAGCGAGGACAAAACATCTATCTTTTGATTTAGTGCCTATTAGATTTGCTCGTTGTGACGATCGGTTCATATTTCCATTTGAACTTTTAGACAGTGGAAGCATTTGCCGTCTACAACATCTTCAATTTAGCTTTA TCTCTTTGCAACCACCTTCCTGGTTCGGAGGTTTCCCAAACCTAAAGAAGCTTGAGCTTAATTTGGTGCATGTTACAAG AAAGGAACTTGAGAACATGTTGTGCAACTGTTGC ] [+] EMBL CA753428 [ GAAGGTATGTTGTTCTTTCAATTCAGGATTTGATATGCACAATTTTATCAAAATTGCCTCAGAAAGAGGCAATAAGGACTAGTGTNTTATCAAGTAAGTGGAGATCCATGTGGACGCTTCGCTCAAAAATATCTCTTGATGGTGGAGCAGTGTGTGGTAGTCGCAGGCGTGGTCCAAATAAATATTGTCAGAGATTCATNAATAATGTTGAAAAAGTTCTACAGAATTATCAAGGAAAGATGGTGGAAGCATTTGGAATTAAGTTTGAATTTGACAGCATTCTAGTTGATAATCTGAATAAGTGGGTTAGTTTTGCTGTGTTAGCGAGGACCAAACATCTATCTTTTGATTTAGTGCCTATTAGATTTGCTCCTTGTGACGATCGGTTCATATTCCCATTTGAACCTTTAGACAGTGGAAGCATCTGGCGTCTACCACATCTTCCATTTACCCTTATTTTCTTGGCACCCCCCTCCCCGGTCCGGAAGTTTCCCAAACCCTAGGAAGCCTGAGCCTAATTTGGTGCATGTAACAAGAAAAGGAcc ] [-] EMBL CB627505 [ TTGCGCACATATTATCTCATGGTTCCGACAAAATTCTGTACTTAGCTTATGTCATGAGGGCTGCACCCTTCGTTGAAAAGGTGGAAGTGCATTTTGCTAGCGGTCATAGCCTATGGTTTGCACAAGAAGGCCCCCTTAGACATGAACTTGGGCACGATGAATACAAATATCTGAAGAACCTTTGTGTTACAGGATTCAAAGGGGCTAGAGGACAACTTGAGTTTCTTTTACATGTTGTGGAAAATGCAACTGCACTAGACGTTATAACTGTGGATACAACTGAAAGAATGTTGGAAAGTGACATTAAGAACGACTATCTCTGCAGTATTGCTCGTCAGACTATCGAACTTCATATCCGCGAGGCACTCCCACCGAAGGCGAAGCTCTTTGTTCTTTAGGCTCTGCCAAAAAGTCTTTAAGCATGCATTTAGCGGAATGTAGTGGTGTGCTCCCCCCCACCCTCGATCCGTATGATGTGCCCGGCTATTCAAATGCATGTCTAGGTGAAGATGTGAGGATTGGGACAGGGGATTTCTAGATTTTTGTGTGTGTGTGTGTGTGTAAATTCTACTGAAAGGGGATAAAGTTCGATTGTTCTGTCGCAGTTTCGGTTTCTGGATATATCTGATGCTGTCTTTGTGGTTATAATGCCTAATAGCAGAAAACCTGTCTTCTGACAAACTTGAAAAGGTTGTATATACGACTGTTTCAGTTGTACAATCCAGTTTTC ] [+] EMBL CB683796 [ GGCTAGAGGACAACTTGAGTTTCTTTTACATGTTGTGGAAAATGCAACTGCACTAGACGTTATAACTGTGGATACAACTGAAAGAATGTTGGAAAGTGACATTAAGAACGACTATCTCTGCAGTATTGCTCGTCAGACTATCGAACTTCATATCCGCGAGGCACTCCCACCGAAGGCGAAGCTCTTTGTTCTTTAGGCTCTGCCAAAAAGTCTTTAAGCATGCATTTAGCGGAATGTAGTGGTGTGCTCCCCCCCACCCTCGATCCGTATGATGTGCCCGGCTATTCAAATGCATGTCTAGGTGAAGATGTGAGGATTGGGACAGGGGATTTCTAGATTTTTGTGTGTGTGTGTGTGTGTAAATTCTACTGAAAGGGGATAAAGTTCGATTGTTCTGTCGCAGTTTCGGTTTCTGGATATATCTGATGCTGTCTTTGTGGTTATAATGCCTAATAGCAGAAAACCTGTCTTCTGACAAACTTGAAAAGGTTGTATATACGACTGTTTCAGTTGTACAATCCAGTTTTCTATTTCCAGT ] consensusID : consensus_11945#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1063 fasta sequence [GAGCTTAATTTGGTGCATGTTACAAGAAAGGAACTTGAGAACATGTTGTGCAACTGTTGCTGTCTTGAGTGGTTGAGCATGGTCAGATGCCATCTGAAGGATGACCTTAGGGTAGATCGTCCGATGTCCCATTTAGCCTACCTGCTTATTAGTTGCTGTGTCATAACCAAGATAGAGCTCCACGCTACAAAACTCTCTACCTTTATATATGAGGGTGAATTTGTTCCAATTGTCCTCAATCATACGTCAAAGCTGGTCAATGCACACATTTTCATTTTTGACGCCATTTTTCACCATGTTGTTGCTTCCCTTTTCCATGGCCTTCCAAATGTCCACAAGCTGACATTATGTATTCCTGATCTACAACTGGAGAATCTATGGTCGTTAGATAACTCACTGAAGTTTTCCTGTCTCAAACACATACAATTGTTTGCGCACATATTATCTCATGGTTCCGACAAAATTCTGTACTTAGCTTATGTCATGAGGGCTGCACCCTTCGTTGAAAAGGTGGAAGTGCATTTTGCTAGCGGTCATAGCCTATGGTTTGCACAAGAAGGCCCCCTTAGACATGAACTTGGGCACGATGAATACAAATATCCTG-AGAACCTTTGTGTTACAGGATTCAAAGGGGCTAGAGGACAACTTGAGTTTCTTTTACATGTTGTGGAAAATGCAACTGCACTAGACGTTATAACTGTGGATACAACTGAAAGAATGTTGGAAAGTGACATTAAGAACGACTATCTCTGCAGTATTGCTCGTCAGACTATCGAACTTCATATCCGCGAGGCACTCCCCCCGAAGGCGAAGCTCTTTGTTCTTTAGGCTCTGCCCAAAAGTCTTTAAGCATGCATTTAGCGGAATGTAGTGGTGTGCTCCCCCCCACCCCTCGATCCGTATGATGTGCCCGGCTATTCAAATGCATGTCTAGGTGAAGATGTGAGGATTGGGACCCGGGGATTTCTAGATTTTTGTGTGTGTGTGTGTGTGTAAATTCTACTGAAAGGGGATAAAGTTCGATTGTTCTGTCCCNGTTTCGGTTTCTGGATAAAAAAAAAAA] [+] EMBL CA753918 [GAGCTTAATTTGGTGCATGTTACAAGAAAGGAACTTGAGAACATGTTGTGCAACTGTTGCTGTCTTGAGTGGTTGAGCATGGTCAGATGCCATCTGAAGGATGACCTTAGGGTAGATCGTCCGATGTCCCATTTAGCCTACCTGCTTATTAGTTGCTGTGTCATAACCAAGATAGAGCTCCACGCTACAAAACTCTCTACCTTTATATATGAGGGTGAATTTGTTCCAATTGTCCTCAATCATACGTCAAAGCTGGTCAATGCACACATTTTCATTTTTGACGCCATTTTTCACCATGTTGTTGCTTCCCTTTTCCATGGCCTTCCAAATGTCCACAAGCTGACATTATGTATTCCTGATCTACAACTGGAGAATCTATGGTCGTTAGATAACTCACTGAAGTTTTCCTGTCTCAAACACATACAATTGTTTGCGCACATATTATCTCATGGTTCCGACAAAATTCTGTACTTAGCTTATGTCATGAGGGCTGCACCCTTCGTTGAAAAGGTGGAAGTGCATTTTGCTAGCGGTCATAGCCTATGGTTTGCACAAGAAGGCCCCCTTAGACATGAACTTGGGCACGATGAATACAAATATCCTG ] [-] EMBL BM420165 [ TACCGTTCATAGCCTATGGTTTGCACAAGAAGGCCCCCTTAGACATGAACTT GGCACGATGAATACCAATAT CTGAAGAACCTTTGTGTTACAGGATTCAAAGGGGCTAGAGGACAACTTGAGTTTCTTTTACATGTTGTGGAAAATGCAACTGCACTAGACGTTATAACTGTGGATACAACTGAAAGAATGTTGGAAAGTGACATTAAGAACGACTATCTCTGCAGTATTGCTCGTCAGACTATCGAACTTCATATCCGCGAGGCACTCCCCCCGAAGGCGAAGCTCTTTGTTCTTTAGGCTCTGCCCAAAAGTCTTTAAGCATGCATTTAGCGGAATGTAGTGGTGTGCTCCCCCCCACCCCTCGATCCGTATGATGTGCCCGGCTATTCAAATGCATGTCTAGGTGAAGATGTGAGGATTGGGACCCGGGGATTTCTAGATTTTTGTGTGTGTGTGTGTGTGTAAATTCTACTGAAAGGGGATAAAGTTCGATTGTTCTGTCCCNGTTTCGGTTTCTGGATAAAAAAAAAAA] consensusID : consensus_11945#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 145 fasta sequence [TGTNTCCCCCAATTCTACTGAAAGGGGATAAAGTTCGATNGTTCTGTCGCAGTTTCGGTTTCTGGATATATCTGATGCTGTCTTTGTGTTATAATGGCCTAATACAGAAACCTGTCTTCTGACAAACNTGAAAAGGTTGTATATA] [+] EMBL BI807059 [TGTNTCCCCCAATTCTACTGAAAGGGGATAAAGTTCGATNGTTCTGTCGCAGTTTCGGTTTCTGGATATATCTGATGCTGTCTTTGTGTTATAATGGCCTAATACAGAAACCTGTCTTCTGACAAACNTGAAAAGGTTGTATATA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11945#0 TTCCTCTTCCTCGATAACAAACGCAGCCAACCTCCGCTGGAGCCCGCCCGACCTCCGCCT 60 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 CTCCTACCTTCTCCGGCACAGGAACCGACCGCCAGCCGTCGACCGGTCGGAGGGCTCCGC 120 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 CTCGTCCAGATCTGGCCGCTGCTTCCCTCGGCGGCTCGTCGGATCCTGCTGAATCTCGCG 180 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 TCGGCGTCGGCGTCAGCGGAGGGAACTCAGGAGGGGATCGGTGCTTCGCGTATTGGGGGG 240 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 GCCTCGATGGTCTCCCTCCCCAACGCCGCTCCGACCGTCTCCTCCCCGCGTGGCCCGACG 300 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 AGGCTCGCGGGCATGGCCGACGAAGGGACGAGTGCTCTCGCCGGGGCATGACCGACGCCG 360 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 GCGTTGGACGGGAAACCTCCGAGCTTGCGAATTCGATGCACAGGCTCGGTGAAGAACGGG 420 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 TTCGACAGGAACTCCACCGGCTGGTTGCCTGGTTGCCGTCCCGGCCTCAACCAAACCAAG 480 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 CCTAGCCTAGCCTAGCCTGACGCGAGTTCCTCTCGCATTCGGAAGAAGAGGGGGTGGGGT 540 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 TCACTGGAGGAAGTTCATTGGAGTTTATTGGGGGTAAGGAGAACAGCCTTCCAGCATCTC 600 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 GCGTTTCCAGGATGCTGTCCAGTGAGCTTCCGCAGGAGCTGCATTTTATTAATTTTGTAC 660 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 TTAAAATGGGGAAGTATCTAATGTGCAAAAGGACAACACCGAAACCTACTCATGGTAAAG 720 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 AAATAAGTGAGAAAGGGAAGTCAAATCTTCAATTTAAAGACCTCCCGGCAGTATCTTCTC 780 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 TTCCCCATTTTGTGTTCATATTGAATTATGTACTGGATTTCTTAACTTGAAGGTATGTTG 840 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 TTCTTTCAATTCAGGATTTGATATGCACAATTTTATCAAAATTGCCTCAGAAAGAGGCAA 900 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 TAAGGACTAGTGTTTTATCAAGTAAGTGGAGATCCATGTGGACGCTTCGCTCAAAAATAT 960 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 CTCTTGATGGTGGAGCAGTGTGTGGTAGTCGCAGGCGTGGTCAAAATAAATATTGTCAGA 1020 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 GATTCATTAATAATGTTGAAAAAGTTCTACAGAATTATCAAGGAAAGATGGTGGAAGCAT 1080 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 TTGGAATTAAGTTTGAATTTGACAGCATTCTAGTTGATAATCTGAATAAGTGGGTTAGTT 1140 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 TTGCTGTGTCAGCGAGGACAAAACATCTATCTTTTGATTTAGTGCCTATTAGATTTGCTC 1200 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 GTTGTGACGATCGGTTCATATTTCCATTTGAACTTTTAGACAGTGGAAGCATTTGCCGTC 1260 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 TACAACATCTTCAATTTAGCTTTATCTCTTTGCAACCACCTTCCTGGTTCGGAGGTTTCC 1320 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 CAAACCTAAGGAAGCTTGAGCTTAATTTGGTGCATGTTACAAGAAAGGAACTTGAGAACA 1380 consensus_11945#1 -----------------GAGCTTAATTTGGTGCATGTTACAAGAAAGGAACTTGAGAACA 43 consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 TGTTGTGCAACTGTTGCTGTCTTGAGTGGTTGAGCATGGTCAGATGCCATCTGAAGGATG 1440 consensus_11945#1 TGTTGTGCAACTGTTGCTGTCTTGAGTGGTTGAGCATGGTCAGATGCCATCTGAAGGATG 103 consensus_11945#2 --------------------------------TGTNTCCCCCAATTCTA-CTGAAAGGGG 27 * * * ** * * ***** * * consensus_11945#0 ACCTTAGGGTAGATCGTCCGATGTCCCATTTAGCCTACCTGCTTATTAGTTGCTGTGTCA 1500 consensus_11945#1 ACCTTAGGGTAGATCGTCCGATGTCCCATTTAGCCTACCTGCTTATTAGTTGCTGTGTCA 163 consensus_11945#2 A--TAAAGTTCGATNGTTCTGTCGCAGTTTCGGTTTCTGGATATATCTGATGCTGTCTTT 85 * * * * * *** ** * * * ** * * *** * ****** * consensus_11945#0 TAACCAAGATAGAGCTCCACGCTACAAAACTCTCTACCTTTATATATGAGGGTGAATTTG 1560 consensus_11945#1 TAACCAAGATAGAGCTCCACGCTACAAAACTCTCTACCTTTATATATGAGGGTGAATTTG 223 consensus_11945#2 GTGTTATAATGG-----CCTAATACAGAAACCTGTCTTCTGACAAACNTGAAAAGGTTGT 140 * ** * * **** ** ** * * * * * * ** consensus_11945#0 TTCCAATTGTCCTCAATCATACGTCAAAGCTGGTCAATGCACACATTTTCATTTTTGACG 1620 consensus_11945#1 TTCCAATTGTCCTCAATCATACGTCAAAGCTGGTCAATGCACACATTTTCATTTTTGACG 283 consensus_11945#2 ATATA------------------------------------------------------- 145 * * consensus_11945#0 CCATTTTTCACCATGTTGTTGCTTCCCTTTTCCATGGCCTTCCAAATGTCCACAAGCTGA 1680 consensus_11945#1 CCATTTTTCACCATGTTGTTGCTTCCCTTTTCCATGGCCTTCCAAATGTCCACAAGCTGA 343 consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 CATTATGTATTCCTGATCTACAACTGGAGGTTTTCCCTTTCAACAACTGTGAACTAAAAA 1740 consensus_11945#1 CATTATGTATTCCTGATCTACAACTGGAG------------------------------- 372 consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 TTCAGTTTTCCTAGCACTGTTTGGAGAATGATATTTGTTTTTTTTTTAATCTTTCAGAAT 1800 consensus_11945#1 ---------------------------------------------------------AAT 375 consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 CTATGGTCGTTAGATAACTCACTGAAGTTTTCCTGTCTCAAACACATACAATTGTTTGCG 1860 consensus_11945#1 CTATGGTCGTTAGATAACTCACTGAAGTTTTCCTGTCTCAAACACATACAATTGTTTGCG 435 consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 CACATATTATCTCATGGTTCCGACAAAATTCTGTACTTAGCTTATGTCATGAGGGCTGCA 1920 consensus_11945#1 CACATATTATCTCATGGTTCCGACAAAATTCTGTACTTAGCTTATGTCATGAGGGCTGCA 495 consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 CCCTTCGTTGAAAAGGTGGAAGTGCATTTTGCTAGCGGTCATAGCCTATGGTTTGCACAA 1980 consensus_11945#1 CCCTTCGTTGAAAAGGTGGAAGTGCATTTTGCTAGCGGTCATAGCCTATGGTTTGCACAA 555 consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 GAAGGCCCCCTTAGACATGAACTTGGGCACGATGAATACAAATATCTGAAGAACCTTTGT 2040 consensus_11945#1 GAAGGCCCCCTTAGACATGAACTTGGGCACGATGAATACAAATATCCTGAGAACCTTTGT 615 consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 GTTACAGGATTCAAAGGGGCTAGAGGACAACTTGAGTTTCTTTTACATGTTGTGGAAAAT 2100 consensus_11945#1 GTTACAGGATTCAAAGGGGCTAGAGGACAACTTGAGTTTCTTTTACATGTTGTGGAAAAT 675 consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 GCAACTGCACTAGACGTTATAACTGTGGATACAACTGAAAGAATGTTGGAAAGTGACATT 2160 consensus_11945#1 GCAACTGCACTAGACGTTATAACTGTGGATACAACTGAAAGAATGTTGGAAAGTGACATT 735 consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 AAGAACGACTATCTCTGCAGTATTGCTCGTCAGACTATCGAACTTCATATCCGCGAGGCA 2220 consensus_11945#1 AAGAACGACTATCTCTGCAGTATTGCTCGTCAGACTATCGAACTTCATATCCGCGAGGCA 795 consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 CTCCCACCGAAGGCGAAGCTCTTTGTTCTTTAGGCTCTGCCAAAAAGTCTTTAAGCATGC 2280 consensus_11945#1 CTCCCCCCGAAGGCGAAGCTCTTTGTTCTTTAGGCTCTGCCCAAAAGTCTTTAAGCATGC 855 consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 ATTTAGCGGAATGTAGTGGTGTGCTCCCCCCCACCC-TCGATCCGTATGATGTGCCCGGC 2339 consensus_11945#1 ATTTAGCGGAATGTAGTGGTGTGCTCCCCCCCACCCCTCGATCCGTATGATGTGCCCGGC 915 consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 TATTCAAATGCATGTCTAGGTGAAGATGTGAGGATTGGGACA-GGGGATTTCTAGATTTT 2398 consensus_11945#1 TATTCAAATGCATGTCTAGGTGAAGATGTGAGGATTGGGACCCGGGGATTTCTAGATTTT 975 consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 TGTGTGTGTGTGTGTGTGTAAATTCTACTGAAAGGGGATAAAGTTCGATTGTTCTGTCGC 2458 consensus_11945#1 TGTGTGTGTGTGTGTGTGTAAATTCTACTGAAAGGGGATAAAGTTCGATTGTTCTGTCCC 1035 consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 AGTTTCGGTTTCTGGATATATCTGATGCTGTCTTTGTGGTTATAATGCCTAATAGCAGAA 2518 consensus_11945#1 NGTTTCGGTTTCTGGATAAAAAAAAAAA-------------------------------- 1063 consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 AACCTGTCTTCTGACAAACTTGAAAAGGTTGTATATACGACTGTTTCAGTTGTACAATCC 2578 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 AGTTTTCTATTTCCAGTTCTATTTGGGAATTCTACTATCATGTATGTGTACTACTGAATT 2638 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 CAGCAATAGTAGGTAAAAACAAATGAACTGCAGTATATGTCTTGGACTACCTTGTCAGTT 2698 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 TTTTCTTAATCGTGTAACGTTGACCAATAACCATGTATGCATGTCGACATGCCAATAAAT 2758 consensus_11945#1 ------------------------------------------------------------ consensus_11945#2 ------------------------------------------------------------ consensus_11945#0 GTTCTACCAGTGTAGACAGT 2778 consensus_11945#1 -------------------- consensus_11945#2 -------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||