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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11945#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2778 fasta sequence
[TTCCTCTTCCTCGATAACAAACGCAGCCAACCTCCGCTGGAGCCCGCCCGACCTCCGCCTCTCCTACCTTCTCCGGCACAGGAACCGACCGCCAGCCGTCGACCGGTCGGAGGGCTCCGCCTCGTCCAGATCTGGCCGCTGCTTCCCTCGGCGGCTCGTCGGATCCTGCTGAATCTCGCGTCGGCGTCGGCGTCAGCGGAGGGAACTCAGGAGGGGATCGGTGCTTCGCGTATTGGGGGGGCCTCGATGGTCTCCCTCCCCAACGCCGCTCCGACCGTCTCCTCCCCGCGTGGCCCGACGAGGCTCGCGGGCATGGCCGACGAAGGGACGAGTGCTCTCGCCGGGGCATGACCGACGCCGGCGTTGGACGGGAAACCTCCGAGCTTGCGAATTCGATGCACAGGCTCGGTGAAGAACGGGTTCGACAGGAACTCCACCGGCTGGTTGCCTGGTTGCCGTCCCGGCCTCAACCAAACCAAGCCTAGCCTAGCCTAGCCTGACGCGAGTTCCTCTCGCATTCGGAAGAAGAGGGGGTGGGGTTCACTGGAGGAAGTTCATTGGAGTTTATTGGGGGTAAGGAGAACAGCCTTCCAGCATCTCGCGTTTCCAGGATGCTGTCCAGTGAGCTTCCGCAGGAGCTGCATTTTATTAATTTTGTACTTAAAATGGGGAAGTATCTAATGTGCAAAAGGACAACACCGAAACCTACTCATGGTAAAGAAATAAGTGAGAAAGGGAAGTCAAATCTTCAATTTAAAGACCTCCCGGCAGTATCTTCTCTTCCCCATTTTGTGTTCATATTGAATTATGTACTGGATTTCTTAACTTGAAGGTATGTTGTTCTTTCAATTCAGGATTTGATATGCACAATTTTATCAAAATTGCCTCAGAAAGAGGCAATAAGGACTAGTGTTTTATCAAGTAAGTGGAGATCCATGTGGACGCTTCGCTCAAAAATATCTCTTGATGGTGGAGCAGTGTGTGGTAGTCGCAGGCGTGGTCAAAATAAATATTGTCAGAGATTCATTAATAATGTTGAAAAAGTTCTACAGAATTATCAAGGAAAGATGGTGGAAGCATTTGGAATTAAGTTTGAATTTGACAGCATTCTAGTTGATAATCTGAATAAGTGGGTTAGTTTTGCTGTGTCAGCGAGGACAAAACATCTATCTTTTGATTTAGTGCCTATTAGATTTGCTCGTTGTGACGATCGGTTCATATTTCCATTTGAACTTTTAGACAGTGGAAGCATTTGCCGTCTACAACATCTTCAATTTAGCTTTA-TCTCTTTGCAACCACCTTCCTGGTTCGGAGGTTTCCCAAACCTAAGGAAGCTTGAGCTTAATTTGGTGCATGTTACAAG-AAAGGAACTTGAGAACATGTTGTGCAACTGTTGCTGTCTTGAGTGGTTGAGCATGGTCAGATGCCATCTGAAGGATGACCTTAGGGTAGATCGTCCGATGTCCCATTTAGCCTACCTGCTTATTAGTTGCTGTGTCATAACCAAGATAGAGCTCCACGCTACAAAACTCTCTACCTTTATATATGAGGGTGAATTTGTTCCAATTGTCCTCAATCATACGTCAAAGCTGGTCAATGCACACATTTTCATTTTTGACGCCATTTTTCACCATGTTGTTGCTTCCCTTTTCCATGGCCTTCCAAATGTCCACAAGCTGACATTATGTATTCCTGATCTACAACTGGAGGTTTTCCCTTTCAACAACTGTGAACTAAAAATTCAGTTTTCCTAGCACTGTTTGGAGAATGATATTTGTTTTTTTTTTAATCTTTCAGAATCTATGGTCGTTAGATAACTCACTGAAGTTTTCCTGTCTCAAACACATACAATTGTTTGCGCACATATTATCTCATGGTTCCGACAAAATTCTGTACTTAGCTTATGTCATGAGGGCTGCACCCTTCGTTGAAAAGGTGGAAGTGCATTTTGCTAGCGGTCATAGCCTATGGTTTGCACAAGAAGGCCCCCTTAGACATGAACTTGGGCACGATGAATACAAATATCTGAAGAACCTTTGTGTTACAGGATTCAAAGGGGCTAGAGGACAACTTGAGTTTCTTTTACATGTTGTGGAAAATGCAACTGCACTAGACGTTATAACTGTGGATACAACTGAAAGAATGTTGGAAAGTGACATTAAGAACGACTATCTCTGCAGTATTGCTCGTCAGACTATCGAACTTCATATCCGCGAGGCACTCCCACCGAAGGCGAAGCTCTTTGTTCTTTAGGCTCTGCCAAAAAGTCTTTAAGCATGCATTTAGCGGAATGTAGTGGTGTGCTCCCCCCCACCCTCGATCCGTATGATGTGCCCGGCTATTCAAATGCATGTCTAGGTGAAGATGTGAGGATTGGGACAGGGGATTTCTAGATTTTTGTGTGTGTGTGTGTGTGTAAATTCTACTGAAAGGGGATAAAGTTCGATTGTTCTGTCGCAGTTTCGGTTTCTGGATATATCTGATGCTGTCTTTGTGGTTATAATGCCTAATAGCAGAAAACCTGTCTTCTGACAAACTTGAAAAGGTTGTATATACGACTGTTTCAGTTGTACAATCCAGTTTTCTATTTCCAGTTCTATTTGGGAATTCTACTATCATGTATGTGTACTACTGAATTCAGCAATAGTAGGTAAAAACAAATGAACTGCAGTATATGTCTTGGACTACCTTGTCAGTTTTTTCTTAATCGTGTAACGTTGACCAATAACCATGTATGCATGTCGACATGCCAATAAATGTTCTACCAGTGTAGACAGT]
[+] EMBL AK073019 [TTCCTCTTCCTCGATAACAAACGCAGCCAACCTCCGCTGGAGCCCGCCCGACCTCCGCCTCTCCTACCTTCTCCGGCACAGGAACCGACCGCCAGCCGTCGACCGGTCGGAGGGCTCCGCCTCGTCCAGATCTGGCCGCTGCTTCCCTCGGCGGCTCGTCGGATCCTGCTGAATCTCGCGTCGGCGTCGGCGTCAGCGGAGGGAACTCAGGAGGGGATCGGTGCTTCGCGTATTGGGGGGGCCTCGATGGTCTCCCTCCCCAACGCCGCTCCGACCGTCTCCTCCCCGCGTGGCCCGACGAGGCTCGCGGGCATGGCCGACGAAGGGACGAGTGCTCTCGCCGGGGCATGACCGACGCCGGCGTTGGACGGGAAACCTCCGAGCTTGCGAATTCGATGCACAGGCTCGGTGAAGAACGGGTTCGACAGGAACTCCACCGGCTGGTTGCCTGGTTGCCGTCCCGGCCTCAACCAAACCAAGCCTAGCCTAGCCTAGCCTGACGCGAGTTCCTCTCGCATTCGGAAGAAGAGGGGGTGGGGTTCACTGGAGGAAGTTCATTGGAGTTTATTGGGGGTAAGGAGAACAGCCTTCCAGCATCTCGCGTTTCCAGGATGCTGTCCAGTGAGCTTCCGCAGGAGCTGCATTTTATTAATTTTGTACTTAAAATGGGGAAGTATCTAATGTGCAAAAGGACAACACCGAAACCTACTCATGGTAAAGAAATAAGTGAGAAAGGGAAGTCAAATCTTCAATTTAAAGACCTCCCGGCAGTATCTTCTCTTCCCCATTTTGTGTTCATATTGAATTATGTACTGGATTTCTTAACTTGAAGGTATGTTGTTCTTTCAATTCAGGATTTGATATGCACAATTTTATCAAAATTGCCTCAGAAAGAGGCAATAAGGACTAGTGTTTTATCAAGTAAGTGGAGATCCATGTGGACGCTTCGCTCAAAAATATCTCTTGATGGTGGAGCAGTGTGTGGTAGTCGCAGGCGTGGTCAAAATAAATATTGTCAGAGATTCATTAATAATGTTGAAAAAGTTCTACAGAATTATCAAGGAAAGATGGTGGAAGCATTTGGAATTAAGTTTGAATTTGACAGCATTCTAGTTGATAATCTGAATAAGTGGGTTAGTTTTGCTGTGTCAGCGAGGACAAAACATCTATCTTTTGATTTAGTGCCTATTAGATTTGCTCGTTGTGACGATCGGTTCATATTTCCATTTGAACTTTTAGACAGTGGAAGCATTTGCCGTCTACAACATCTTCAATTTAGCTTTA TCTCTTTGCAACCACCTTCCTGGTTCGGAGGTTTCCCAAACCTAAGGAAGCTTGAGCTTAATTTGGTGCATGTTACAAG AAAGGAACTTGAGAACATGTTGTGCAACTGTTGCTGTCTTGAGTGGTTGAGCATGGTCAGATGCCATCTGAAGGATGACCTTAGGGTAGATCGTCCGATGTCCCATTTAGCCTACCTGCTTATTAGTTGCTGTGTCATAACCAAGATAGAGCTCCACGCTACAAAACTCTCTACCTTTATATATGAGGGTGAATTTGTTCCAATTGTCCTCAATCATACGTCAAAGCTGGTCAATGCACACATTTTCATTTTTGACGCCATTTTTCACCATGTTGTTGCTTCCCTTTTCCATGGCCTTCCAAATGTCCACAAGCTGACATTATGTATTCCTGATCTACAACTGGAGGTTTTCCCTTTCAACAACTGTGAACTAAAAATTCAGTTTTCCTAGCACTGTTTGGAGAATGATATTTGTTTTTTTTTTAATCTTTCAGAATCTATGGTCGTTAGATAACTCACTGAAGTTTTCCTGTCTCAAACACATACAATTGTTTGCGCACATATTATCTCATGGTTCCGACAAAATTCTGTACTTAGCTTATGTCATGAGGGCTGCACCCTTCGTTGAAAAGGTGGAAGTGCATTTTGCTAGCGGTCATAGCCTATGGTTTGCACAAGAAGGCCCCCTTAGACATGAACTTGGGCACGATGAATACAAATATCTGAAGAACCTTTGTGTTACAGGATTCAAAGGGGCTAGAGGACAACTTGAGTTTCTTTTACATGTTGTGGAAAATGCAACTGCACTAGACGTTATAACTGTGGATACAACTGAAAGAATGTTGGAAAGTGACATTAAGAACGACTATCTCTGCAGTATTGCTCGTCAGACTATCGAACTTCATATCCGCGAGGCACTCCCACCGAAGGCGAAGCTCTTTGTTCTTTAGGCTCTGCCAAAAAGTCTTTAAGCATGCATTTAGCGGAATGTAGTGGTGTGCTCCCCCCCACCCTCGATCCGTATGATGTGCCCGGCTATTCAAATGCATGTCTAGGTGAAGATGTGAGGATTGGGACAGGGGATTTCTAGATTTTTGTGTGTGTGTGTGTGTGTAAATTCTACTGAAAGGGGATAAAGTTCGATTGTTCTGTCGCAGTTTCGGTTTCTGGATATATCTGATGCTGTCTTTGTGGTTATAATGCCTAATAGCAGAAAACCTGTCTTCTGACAAACTTGAAAAGGTTGTATATACGACTGTTTCAGTTGTACAATCCAGTTTTCTATTTCCAGTTCTATTTGGGAATTCTACTATCATGTATGTGTACTACTGAATTCAGCAATAGTAGGTAAAAACAAATGAACTGCAGTATATGTCTTGGACTACCTTGTCAGTTTTTTCTTAATCGTGTAACGTTGACCAATAACCATGTATGCATGTCGACATGCCAATAAATGTTCTACCAGTGTAGACAGT]
[+] EMBL CB627504 [ GGGGGGCCTCGATGGTCTCCCTCCCCAACGCCGCTCCGACCGTCTCCTCCCCGCGTGGCCCGACGAGGCTCGCGGGCATGGCCGACGAAGGGACGAGTGCTCTCGCCGGGGCATGACCGACGCCGGCGTTGGACGGGAAACCTCCGAGCTTGCGAATTCGATGCACAGGCTCGGTGAAGAACGGGTTCGACAGGAACTCCACCGGCTGGTTGCCTGGTTGCCGTCCCGGCCTCAACCAAACCAAGCCTAGCCTAGCCTAGCCTGACGCGAGTTCCTCTCGCATTCGGAAGAAGAGGGGGTGGGGTTCACTGGAGGAAGTTCATTGGAGTTTATTGGGGGTAAGGAGAACAGCCTTCCAGCATCTCGCGTTTCCAGGATGCTGTCCAGTGAGCTTCCGCAGGAGCTGCATTTTATTAATTTTGTACTTAAAATGGGGAAGTATCTAATGTGCAAAAGGACAACACCGAAACCTACCCATGGTAAAGAAATAAGTGAGAAAGGGAAGTCAAATCTTCAATTTGAAGACCTCCCGGCAGTATCTTCTCTTCCCCATTTTGTGTTCATATTGAATTATGTACTGGATTTCTTAACTTGAAGGTATGTTGTTCTTTCAATTCAGGATTTGATATGCACAATTTTATCAAAATTGCCTCAGAAAGAGGCAATAAGGACTAGTGTTTTATCAAGTAAGTGGAGATCCATGTGGACGCTTCGCTCAAAAATA ]
[+] EMBL CB637315 [ AACTTGAAGGTATGTTGTTCTTTCAATTCAGGATTTGATATGCACAATTTTATCAAAATTGCCTCAGAAAGAGGCAATAAGGACTAGTGTTTTATCAAGTAAGTGGAGATCCATGTGGACGCTTCGCTCAAAAATATCTCTTGATGGTGGAGCAGTGTGTGGTAGTCGCAGGCGTTGTCTAAATAAATATTGTCAGAGATTCATTAATAATGTTGAAAAAGTTCTACAGAATTATCAAGGAAAGATGGTGGAAGCATTTGGAATTAAGTTTGAATTTGACAGCATTCTAGTTGATAATCTGAATAAGTGGGTTAGTTTTGCTGTGTCAGCGAGGACAAAACATCTATCTTTTGATTTAGTGCCTATTAGATTTGCTCGTTGTGACGATCGGTTCATATTTCCATTTGAACTTTTAGACAGTGGAAGCATTTGCCGTCTACAACATCTTCAATTTAGCTTTA TCTCTTTGCAACCACCTTCCTGGTTCGGAGGTTTCCCAAACCTAAAGAAGCTTGAGCTTAATTTGGTGCATGTTACAAG AAAGGAACTTGAGAACATGTTGTGCAACTGTTGC ]
[+] EMBL CA753428 [ GAAGGTATGTTGTTCTTTCAATTCAGGATTTGATATGCACAATTTTATCAAAATTGCCTCAGAAAGAGGCAATAAGGACTAGTGTNTTATCAAGTAAGTGGAGATCCATGTGGACGCTTCGCTCAAAAATATCTCTTGATGGTGGAGCAGTGTGTGGTAGTCGCAGGCGTGGTCCAAATAAATATTGTCAGAGATTCATNAATAATGTTGAAAAAGTTCTACAGAATTATCAAGGAAAGATGGTGGAAGCATTTGGAATTAAGTTTGAATTTGACAGCATTCTAGTTGATAATCTGAATAAGTGGGTTAGTTTTGCTGTGTTAGCGAGGACCAAACATCTATCTTTTGATTTAGTGCCTATTAGATTTGCTCCTTGTGACGATCGGTTCATATTCCCATTTGAACCTTTAGACAGTGGAAGCATCTGGCGTCTACCACATCTTCCATTTACCCTTATTTTCTTGGCACCCCCCTCCCCGGTCCGGAAGTTTCCCAAACCCTAGGAAGCCTGAGCCTAATTTGGTGCATGTAACAAGAAAAGGAcc ]
[-] EMBL CB627505 [ TTGCGCACATATTATCTCATGGTTCCGACAAAATTCTGTACTTAGCTTATGTCATGAGGGCTGCACCCTTCGTTGAAAAGGTGGAAGTGCATTTTGCTAGCGGTCATAGCCTATGGTTTGCACAAGAAGGCCCCCTTAGACATGAACTTGGGCACGATGAATACAAATATCTGAAGAACCTTTGTGTTACAGGATTCAAAGGGGCTAGAGGACAACTTGAGTTTCTTTTACATGTTGTGGAAAATGCAACTGCACTAGACGTTATAACTGTGGATACAACTGAAAGAATGTTGGAAAGTGACATTAAGAACGACTATCTCTGCAGTATTGCTCGTCAGACTATCGAACTTCATATCCGCGAGGCACTCCCACCGAAGGCGAAGCTCTTTGTTCTTTAGGCTCTGCCAAAAAGTCTTTAAGCATGCATTTAGCGGAATGTAGTGGTGTGCTCCCCCCCACCCTCGATCCGTATGATGTGCCCGGCTATTCAAATGCATGTCTAGGTGAAGATGTGAGGATTGGGACAGGGGATTTCTAGATTTTTGTGTGTGTGTGTGTGTGTAAATTCTACTGAAAGGGGATAAAGTTCGATTGTTCTGTCGCAGTTTCGGTTTCTGGATATATCTGATGCTGTCTTTGTGGTTATAATGCCTAATAGCAGAAAACCTGTCTTCTGACAAACTTGAAAAGGTTGTATATACGACTGTTTCAGTTGTACAATCCAGTTTTC ]
[+] EMBL CB683796 [ GGCTAGAGGACAACTTGAGTTTCTTTTACATGTTGTGGAAAATGCAACTGCACTAGACGTTATAACTGTGGATACAACTGAAAGAATGTTGGAAAGTGACATTAAGAACGACTATCTCTGCAGTATTGCTCGTCAGACTATCGAACTTCATATCCGCGAGGCACTCCCACCGAAGGCGAAGCTCTTTGTTCTTTAGGCTCTGCCAAAAAGTCTTTAAGCATGCATTTAGCGGAATGTAGTGGTGTGCTCCCCCCCACCCTCGATCCGTATGATGTGCCCGGCTATTCAAATGCATGTCTAGGTGAAGATGTGAGGATTGGGACAGGGGATTTCTAGATTTTTGTGTGTGTGTGTGTGTGTAAATTCTACTGAAAGGGGATAAAGTTCGATTGTTCTGTCGCAGTTTCGGTTTCTGGATATATCTGATGCTGTCTTTGTGGTTATAATGCCTAATAGCAGAAAACCTGTCTTCTGACAAACTTGAAAAGGTTGTATATACGACTGTTTCAGTTGTACAATCCAGTTTTCTATTTCCAGT ]
consensusID : consensus_11945#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1063 fasta sequence
[GAGCTTAATTTGGTGCATGTTACAAGAAAGGAACTTGAGAACATGTTGTGCAACTGTTGCTGTCTTGAGTGGTTGAGCATGGTCAGATGCCATCTGAAGGATGACCTTAGGGTAGATCGTCCGATGTCCCATTTAGCCTACCTGCTTATTAGTTGCTGTGTCATAACCAAGATAGAGCTCCACGCTACAAAACTCTCTACCTTTATATATGAGGGTGAATTTGTTCCAATTGTCCTCAATCATACGTCAAAGCTGGTCAATGCACACATTTTCATTTTTGACGCCATTTTTCACCATGTTGTTGCTTCCCTTTTCCATGGCCTTCCAAATGTCCACAAGCTGACATTATGTATTCCTGATCTACAACTGGAGAATCTATGGTCGTTAGATAACTCACTGAAGTTTTCCTGTCTCAAACACATACAATTGTTTGCGCACATATTATCTCATGGTTCCGACAAAATTCTGTACTTAGCTTATGTCATGAGGGCTGCACCCTTCGTTGAAAAGGTGGAAGTGCATTTTGCTAGCGGTCATAGCCTATGGTTTGCACAAGAAGGCCCCCTTAGACATGAACTTGGGCACGATGAATACAAATATCCTG-AGAACCTTTGTGTTACAGGATTCAAAGGGGCTAGAGGACAACTTGAGTTTCTTTTACATGTTGTGGAAAATGCAACTGCACTAGACGTTATAACTGTGGATACAACTGAAAGAATGTTGGAAAGTGACATTAAGAACGACTATCTCTGCAGTATTGCTCGTCAGACTATCGAACTTCATATCCGCGAGGCACTCCCCCCGAAGGCGAAGCTCTTTGTTCTTTAGGCTCTGCCCAAAAGTCTTTAAGCATGCATTTAGCGGAATGTAGTGGTGTGCTCCCCCCCACCCCTCGATCCGTATGATGTGCCCGGCTATTCAAATGCATGTCTAGGTGAAGATGTGAGGATTGGGACCCGGGGATTTCTAGATTTTTGTGTGTGTGTGTGTGTGTAAATTCTACTGAAAGGGGATAAAGTTCGATTGTTCTGTCCCNGTTTCGGTTTCTGGATAAAAAAAAAAA]
[+] EMBL CA753918 [GAGCTTAATTTGGTGCATGTTACAAGAAAGGAACTTGAGAACATGTTGTGCAACTGTTGCTGTCTTGAGTGGTTGAGCATGGTCAGATGCCATCTGAAGGATGACCTTAGGGTAGATCGTCCGATGTCCCATTTAGCCTACCTGCTTATTAGTTGCTGTGTCATAACCAAGATAGAGCTCCACGCTACAAAACTCTCTACCTTTATATATGAGGGTGAATTTGTTCCAATTGTCCTCAATCATACGTCAAAGCTGGTCAATGCACACATTTTCATTTTTGACGCCATTTTTCACCATGTTGTTGCTTCCCTTTTCCATGGCCTTCCAAATGTCCACAAGCTGACATTATGTATTCCTGATCTACAACTGGAGAATCTATGGTCGTTAGATAACTCACTGAAGTTTTCCTGTCTCAAACACATACAATTGTTTGCGCACATATTATCTCATGGTTCCGACAAAATTCTGTACTTAGCTTATGTCATGAGGGCTGCACCCTTCGTTGAAAAGGTGGAAGTGCATTTTGCTAGCGGTCATAGCCTATGGTTTGCACAAGAAGGCCCCCTTAGACATGAACTTGGGCACGATGAATACAAATATCCTG ]
[-] EMBL BM420165 [ TACCGTTCATAGCCTATGGTTTGCACAAGAAGGCCCCCTTAGACATGAACTT GGCACGATGAATACCAATAT CTGAAGAACCTTTGTGTTACAGGATTCAAAGGGGCTAGAGGACAACTTGAGTTTCTTTTACATGTTGTGGAAAATGCAACTGCACTAGACGTTATAACTGTGGATACAACTGAAAGAATGTTGGAAAGTGACATTAAGAACGACTATCTCTGCAGTATTGCTCGTCAGACTATCGAACTTCATATCCGCGAGGCACTCCCCCCGAAGGCGAAGCTCTTTGTTCTTTAGGCTCTGCCCAAAAGTCTTTAAGCATGCATTTAGCGGAATGTAGTGGTGTGCTCCCCCCCACCCCTCGATCCGTATGATGTGCCCGGCTATTCAAATGCATGTCTAGGTGAAGATGTGAGGATTGGGACCCGGGGATTTCTAGATTTTTGTGTGTGTGTGTGTGTGTAAATTCTACTGAAAGGGGATAAAGTTCGATTGTTCTGTCCCNGTTTCGGTTTCTGGATAAAAAAAAAAA]
consensusID : consensus_11945#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 145 fasta sequence
[TGTNTCCCCCAATTCTACTGAAAGGGGATAAAGTTCGATNGTTCTGTCGCAGTTTCGGTTTCTGGATATATCTGATGCTGTCTTTGTGTTATAATGGCCTAATACAGAAACCTGTCTTCTGACAAACNTGAAAAGGTTGTATATA]
[+] EMBL BI807059 [TGTNTCCCCCAATTCTACTGAAAGGGGATAAAGTTCGATNGTTCTGTCGCAGTTTCGGTTTCTGGATATATCTGATGCTGTCTTTGTGTTATAATGGCCTAATACAGAAACCTGTCTTCTGACAAACNTGAAAAGGTTGTATATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11945#0 TTCCTCTTCCTCGATAACAAACGCAGCCAACCTCCGCTGGAGCCCGCCCGACCTCCGCCT 60
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 CTCCTACCTTCTCCGGCACAGGAACCGACCGCCAGCCGTCGACCGGTCGGAGGGCTCCGC 120
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 CTCGTCCAGATCTGGCCGCTGCTTCCCTCGGCGGCTCGTCGGATCCTGCTGAATCTCGCG 180
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 TCGGCGTCGGCGTCAGCGGAGGGAACTCAGGAGGGGATCGGTGCTTCGCGTATTGGGGGG 240
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 GCCTCGATGGTCTCCCTCCCCAACGCCGCTCCGACCGTCTCCTCCCCGCGTGGCCCGACG 300
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 AGGCTCGCGGGCATGGCCGACGAAGGGACGAGTGCTCTCGCCGGGGCATGACCGACGCCG 360
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 GCGTTGGACGGGAAACCTCCGAGCTTGCGAATTCGATGCACAGGCTCGGTGAAGAACGGG 420
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 TTCGACAGGAACTCCACCGGCTGGTTGCCTGGTTGCCGTCCCGGCCTCAACCAAACCAAG 480
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 CCTAGCCTAGCCTAGCCTGACGCGAGTTCCTCTCGCATTCGGAAGAAGAGGGGGTGGGGT 540
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 TCACTGGAGGAAGTTCATTGGAGTTTATTGGGGGTAAGGAGAACAGCCTTCCAGCATCTC 600
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 GCGTTTCCAGGATGCTGTCCAGTGAGCTTCCGCAGGAGCTGCATTTTATTAATTTTGTAC 660
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 TTAAAATGGGGAAGTATCTAATGTGCAAAAGGACAACACCGAAACCTACTCATGGTAAAG 720
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 AAATAAGTGAGAAAGGGAAGTCAAATCTTCAATTTAAAGACCTCCCGGCAGTATCTTCTC 780
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 TTCCCCATTTTGTGTTCATATTGAATTATGTACTGGATTTCTTAACTTGAAGGTATGTTG 840
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 TTCTTTCAATTCAGGATTTGATATGCACAATTTTATCAAAATTGCCTCAGAAAGAGGCAA 900
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 TAAGGACTAGTGTTTTATCAAGTAAGTGGAGATCCATGTGGACGCTTCGCTCAAAAATAT 960
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 CTCTTGATGGTGGAGCAGTGTGTGGTAGTCGCAGGCGTGGTCAAAATAAATATTGTCAGA 1020
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 GATTCATTAATAATGTTGAAAAAGTTCTACAGAATTATCAAGGAAAGATGGTGGAAGCAT 1080
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 TTGGAATTAAGTTTGAATTTGACAGCATTCTAGTTGATAATCTGAATAAGTGGGTTAGTT 1140
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 TTGCTGTGTCAGCGAGGACAAAACATCTATCTTTTGATTTAGTGCCTATTAGATTTGCTC 1200
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 GTTGTGACGATCGGTTCATATTTCCATTTGAACTTTTAGACAGTGGAAGCATTTGCCGTC 1260
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 TACAACATCTTCAATTTAGCTTTATCTCTTTGCAACCACCTTCCTGGTTCGGAGGTTTCC 1320
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 CAAACCTAAGGAAGCTTGAGCTTAATTTGGTGCATGTTACAAGAAAGGAACTTGAGAACA 1380
consensus_11945#1 -----------------GAGCTTAATTTGGTGCATGTTACAAGAAAGGAACTTGAGAACA 43
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 TGTTGTGCAACTGTTGCTGTCTTGAGTGGTTGAGCATGGTCAGATGCCATCTGAAGGATG 1440
consensus_11945#1 TGTTGTGCAACTGTTGCTGTCTTGAGTGGTTGAGCATGGTCAGATGCCATCTGAAGGATG 103
consensus_11945#2 --------------------------------TGTNTCCCCCAATTCTA-CTGAAAGGGG 27
* * * ** * * ***** * *
consensus_11945#0 ACCTTAGGGTAGATCGTCCGATGTCCCATTTAGCCTACCTGCTTATTAGTTGCTGTGTCA 1500
consensus_11945#1 ACCTTAGGGTAGATCGTCCGATGTCCCATTTAGCCTACCTGCTTATTAGTTGCTGTGTCA 163
consensus_11945#2 A--TAAAGTTCGATNGTTCTGTCGCAGTTTCGGTTTCTGGATATATCTGATGCTGTCTTT 85
* * * * * *** ** * * * ** * * *** * ****** *
consensus_11945#0 TAACCAAGATAGAGCTCCACGCTACAAAACTCTCTACCTTTATATATGAGGGTGAATTTG 1560
consensus_11945#1 TAACCAAGATAGAGCTCCACGCTACAAAACTCTCTACCTTTATATATGAGGGTGAATTTG 223
consensus_11945#2 GTGTTATAATGG-----CCTAATACAGAAACCTGTCTTCTGACAAACNTGAAAAGGTTGT 140
* ** * * **** ** ** * * * * * * **
consensus_11945#0 TTCCAATTGTCCTCAATCATACGTCAAAGCTGGTCAATGCACACATTTTCATTTTTGACG 1620
consensus_11945#1 TTCCAATTGTCCTCAATCATACGTCAAAGCTGGTCAATGCACACATTTTCATTTTTGACG 283
consensus_11945#2 ATATA------------------------------------------------------- 145
* *
consensus_11945#0 CCATTTTTCACCATGTTGTTGCTTCCCTTTTCCATGGCCTTCCAAATGTCCACAAGCTGA 1680
consensus_11945#1 CCATTTTTCACCATGTTGTTGCTTCCCTTTTCCATGGCCTTCCAAATGTCCACAAGCTGA 343
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 CATTATGTATTCCTGATCTACAACTGGAGGTTTTCCCTTTCAACAACTGTGAACTAAAAA 1740
consensus_11945#1 CATTATGTATTCCTGATCTACAACTGGAG------------------------------- 372
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 TTCAGTTTTCCTAGCACTGTTTGGAGAATGATATTTGTTTTTTTTTTAATCTTTCAGAAT 1800
consensus_11945#1 ---------------------------------------------------------AAT 375
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 CTATGGTCGTTAGATAACTCACTGAAGTTTTCCTGTCTCAAACACATACAATTGTTTGCG 1860
consensus_11945#1 CTATGGTCGTTAGATAACTCACTGAAGTTTTCCTGTCTCAAACACATACAATTGTTTGCG 435
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 CACATATTATCTCATGGTTCCGACAAAATTCTGTACTTAGCTTATGTCATGAGGGCTGCA 1920
consensus_11945#1 CACATATTATCTCATGGTTCCGACAAAATTCTGTACTTAGCTTATGTCATGAGGGCTGCA 495
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 CCCTTCGTTGAAAAGGTGGAAGTGCATTTTGCTAGCGGTCATAGCCTATGGTTTGCACAA 1980
consensus_11945#1 CCCTTCGTTGAAAAGGTGGAAGTGCATTTTGCTAGCGGTCATAGCCTATGGTTTGCACAA 555
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 GAAGGCCCCCTTAGACATGAACTTGGGCACGATGAATACAAATATCTGAAGAACCTTTGT 2040
consensus_11945#1 GAAGGCCCCCTTAGACATGAACTTGGGCACGATGAATACAAATATCCTGAGAACCTTTGT 615
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 GTTACAGGATTCAAAGGGGCTAGAGGACAACTTGAGTTTCTTTTACATGTTGTGGAAAAT 2100
consensus_11945#1 GTTACAGGATTCAAAGGGGCTAGAGGACAACTTGAGTTTCTTTTACATGTTGTGGAAAAT 675
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 GCAACTGCACTAGACGTTATAACTGTGGATACAACTGAAAGAATGTTGGAAAGTGACATT 2160
consensus_11945#1 GCAACTGCACTAGACGTTATAACTGTGGATACAACTGAAAGAATGTTGGAAAGTGACATT 735
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 AAGAACGACTATCTCTGCAGTATTGCTCGTCAGACTATCGAACTTCATATCCGCGAGGCA 2220
consensus_11945#1 AAGAACGACTATCTCTGCAGTATTGCTCGTCAGACTATCGAACTTCATATCCGCGAGGCA 795
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 CTCCCACCGAAGGCGAAGCTCTTTGTTCTTTAGGCTCTGCCAAAAAGTCTTTAAGCATGC 2280
consensus_11945#1 CTCCCCCCGAAGGCGAAGCTCTTTGTTCTTTAGGCTCTGCCCAAAAGTCTTTAAGCATGC 855
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 ATTTAGCGGAATGTAGTGGTGTGCTCCCCCCCACCC-TCGATCCGTATGATGTGCCCGGC 2339
consensus_11945#1 ATTTAGCGGAATGTAGTGGTGTGCTCCCCCCCACCCCTCGATCCGTATGATGTGCCCGGC 915
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 TATTCAAATGCATGTCTAGGTGAAGATGTGAGGATTGGGACA-GGGGATTTCTAGATTTT 2398
consensus_11945#1 TATTCAAATGCATGTCTAGGTGAAGATGTGAGGATTGGGACCCGGGGATTTCTAGATTTT 975
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 TGTGTGTGTGTGTGTGTGTAAATTCTACTGAAAGGGGATAAAGTTCGATTGTTCTGTCGC 2458
consensus_11945#1 TGTGTGTGTGTGTGTGTGTAAATTCTACTGAAAGGGGATAAAGTTCGATTGTTCTGTCCC 1035
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 AGTTTCGGTTTCTGGATATATCTGATGCTGTCTTTGTGGTTATAATGCCTAATAGCAGAA 2518
consensus_11945#1 NGTTTCGGTTTCTGGATAAAAAAAAAAA-------------------------------- 1063
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 AACCTGTCTTCTGACAAACTTGAAAAGGTTGTATATACGACTGTTTCAGTTGTACAATCC 2578
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 AGTTTTCTATTTCCAGTTCTATTTGGGAATTCTACTATCATGTATGTGTACTACTGAATT 2638
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 CAGCAATAGTAGGTAAAAACAAATGAACTGCAGTATATGTCTTGGACTACCTTGTCAGTT 2698
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 TTTTCTTAATCGTGTAACGTTGACCAATAACCATGTATGCATGTCGACATGCCAATAAAT 2758
consensus_11945#1 ------------------------------------------------------------
consensus_11945#2 ------------------------------------------------------------
consensus_11945#0 GTTCTACCAGTGTAGACAGT 2778
consensus_11945#1 --------------------
consensus_11945#2 --------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||