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Oryza sativa
cluster # 11949 cluster # 11949       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11949#0 length = 2334 sequences # 8  
consensus_11949#1 length = 383 sequences # 1  

consensusID : consensus_11949#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2334
fasta sequence
                              [CCGATCCTCTCATCCACCACCACCATCGCAAGAGAGACGCTCGCCTTCCGTCTCCTGACGCGCACACGCCACCAACACCGCGACGCGACGCGACG-GAGCGCCAAACGTGAGCGCGGAAAGAGGAGAGGTGAGGTGAGGTGCGTGGCCCTTGGACTTTCGAGGCGAAACCCCGCGTGCGTGCGTATATGAGATCCACATCCGGCGCCCGCCCCAGCAGCGGTGGAGGAGGAGGGGACGACGACTACGCCTTCTACTACTCTTTCTTCCAGGACGCCGCCGCCGCCGCCGCGTCGCCGCTCGGCCTCGACGACGCCGCCGCTATGACCAACGGTGGACGGAAGCGGAAGAGGGGAGGAGGAGGGGATGGGGCGGACGGCGGCGCCCCCGCCGCGTCCAGGAAGGATGGGCCTGGAGGGGACGGTGAGGGGGGAAACGGCAGGAAGCGGTCCATCGCCAAGATACTCACCTCGCTCGCCGCGCTCGAGGCGGAGGAGCACTCCGACCGCGCCGGCGCCGCCGACGCCTCCCGCCGGGAGCTCGCGCTGCTCGAGTCCAACGCCGACCACAAGTCGCAGGCCATGATGGACTACTACGCCAAGATGGAGGGGAGCTTCGACGCCGCCGCGGAGTCGGACGCCACCGCGCGGTCCAAGCGCTCGCGCCTCGCCGCGTCGGCCACCACGGCGGCGGTCGTGGCTACCGAGGAGGGGGCCGCCGAGACGGCCTCCGCGTCGGCGTCGCCGT-CGCGAGCGAGCGGCGGCGGGGGCGCGGGGCACCACCAGCGGCGGCTGTGGGTGAAGGACCGGTCGCGGGCGTGGTGGGACAAATGCAACAGCCCGGACTACCCGGAGGAGGAGTTCCGTCGCGCGTTCCGGATGGGGCGCGAGACGTTCGACATGATCTGCGAGGCGCTGGGCTCCGCGGTGGCCAAGGAGGACACCATGCTCCGCGCCGCCATCCCCGTGCGCCAGCGCGTCGCCGTCTGCATCTGGCGCCTCGCCACGGGCGAGCCGCTCCGCCTCGTCTCCAAGCGCTTCGGCCTCGGGATCTCCACCTGCCACAAGCTCGTCCTCGAGGTGTGCGCCGCCATCAAGTCCGTCCCCTCCCCCGGCGGTACTCCAGCGGCCTCCCGCGGGCTCCCCGGCTGGCCGGGGTTCTGCGGGGTGGGCTGCGGCTCCTCGTCGTCGTCGTCGTTTGCTCCGCCGCGGATGCAGGCCCGGCGGGCCGCGGGGTCGGCTGCGCGCACGCGGTCGCCGTCGCAGTCCAACGGCTGGATTACCGGCGGCTCCGCGAGTGAGGATGGTAGACTTAGCTGGGATTATTCAAGTTTCAAGGGGAGGAGGCCTTCTATGGAGGATCGGTTTAGCATAAAGATGACTACGATCAACGAACAGACAGTCAGCCTATTTGGTGTATTTGATGGTCATGGAGGATCACTTGCTGCTGAATATCTTAAGGAACATTTGTTTGAAAACCTTGTGAATCACCCTGAGCTCCTTAGAGACACAAAGCTTGCTATAAGCCAAACGTTCCTGAAAACTGATGCTGATTTCCTAGAGTCAGTGTCTTCTAATCCTTTTAGGGATGATGGTTCAACAGCTGTGACTGCTATTTTGGTTGGCAACCACCTATATGTTGGTAATGTTGGTGATTCACGTGTTGTCGCTCTAAAAGCTGGCAAAGCTGTCCCACTGTCAGAAGATCATAAACCTAACAGAAAAGATGAGCAGAAGAGAATTGAGGATGCCGGAGGTATTGTTGTTTTCGATGATACATGGAGGGTTAATGGACTTTTGGCAATGTCCCGTGCATTTGGCAACCGTGCATTGAAGCACTATGTGAAAGCAGAACCAGATATTCAGGAAAAAGTGGTCGATGAAAGCTTGGAATACCTGATTCTTGCTACTGATGGCCTTTGGGATGTTATGCGAAATGAGGATGCTGTTTCTCTTTTGAAAGCGCAAGATGGACCCAAAGCAGCAGCCATGAAGCTGACAGAAGTCGCCCACTCTCGGCTTACCTTAGACAACATCACATGCATCGTGCTGCAGTTTCACCATGGAAAATCAACCAACAGCAACTGATGTTAACAAAGTTTTGTCACCAGATATCTTGAAACGAGAGTTGGTCCCCTGATCCGCGGTTCTACAAGATTATTACTAGATTGGTTGAGTCGTTTTTTTCGTCATGTAGGAAGCTTTTAAATCTGACGTGCACAGTTTACTAGCGAAACGTCTTATGGTTGTTTGATTTCGGTTTCGGATCTCTTGCTATTAGGGGTAGCCGGCCCTGAAATATTAAGTTATCTATAGCATAAGAAATGTTCTAAATTTT]

[+] EMBL AK120510             [CCGATCCTCTCATCCACCACCACCATCGCAAGAGAGACGCTCGCCTTCCGTCTCCTGACGCGCACACGCCACCAACACCGCGACGCGACGCGACGCGAGCGCCAAACGTGAGCGCGGAAAGAGGAGAGGTGAGGTGAGGTGCGTGGCCCTTGGACTTTCGAGGCGAAACCCCGCGTGCGTGCGTATATGAGATCCACATCCGGCGCCCGCCCCAGCAGCGGTGGAGGAGGAGGGGACGACGACTACGCCTTCTACTACTCTTTCTTCCAGGACGCCGCCGCCGCCGCCGCGTCGCCGCTCGGCCTCGACGACGCCGCCGCTATGACCAACGGTGGACGGAAGCGGAAGAGGGGAGGAGGAGGGGATGGGGCGGACGGCGGCGCCCCCGCCGCGTCCAGGAAGGATGGGCCTGGAGGGGACGGTGAGGGGGGAAACGGCAGGAAGCGGTCCATCGCCAAGATACTCACCTCGCTCGCCGCGCTCGAGGCGGAGGAGCACTCCGACCGCGCCGGCGCCGCCGACGCCTCCCGCCGGGAGCTCGCGCTGCTCGAGTCCAACGCCGACCACAAGTCGCAGGCCATGATGGACTACTACGCCAAGATGGAGGGGAGCTTCGACGCCGCCGCGGAGTCGGACGCCACCGCGCGGTCCAAGCGCTCGCGCCTCGCCGCGTCGGCCACCACGGCGGCGGTCGTGGCTACCGAGGAGGGGGCCGCCGAGACGGCCTCCGCGTCGGCGTCGCCGT CGCGAGCGAGCGGCGGCGGGGGCGCGGGGCACCACCAGCGGCGGCTGTGGGTGAAGGACCGGTCGCGGGCGTGGTGGGACAAATGCAACAGCCCGGACTACCCGGAGGAGGAGTTCCGTCGCGCGTTCCGGATGGGGCGCGAGACGTTCGACATGATCTGCGAGGCGCTGGGCTCCGCGGTGGCCAAGGAGGACACCATGCTCCGCGCCGCCATCCCCGTGCGCCAGCGCGTCGCCGTCTGCATCTGGCGCCTCGCCACGGGCGAGCCGCTCCGCCTCGTCTCCAAGCGCTTCGGCCTCGGGATCTCCACCTGCCACAAGCTCGTCCTCGAGGTGTGCGCCGCCATCAAGTCCGTCCCCTCCCCCGGCGGTACTCCAGCGGCCTCCCGCGGGCTCCCCGGCTGGCCGGGGTTCTGCGGGGTGGGCTGCGGCTCCTCGTCGTCGTCGTCGTTTGCTCCGCCGCGGATGCAGGCCCGGCGGGCCGCGGGGTCGGCTGCGCGCACGCGGTCGCCGTCGCAGTCCAACGGCTGGATTACCGGCGGCTCCGCGAGTGAGGATGGTAGACTTAGCTGGGATTATTCAAGTTTCAAGGGGAGGAGGCCTTCTATGGAGGATCGGTTTAGCATAAAGATGACTACGATCAACGAACAGACAGTCAGCCTATTTGGTGTATTTGATGGTCATGGAGGATCACTTGCTGCTGAATATCTTAAGGAACATTTGTTTGAAAACCTTGTGAATCACCCTGAGCTCCTTAGAGACACAAAGCTTGCTATAAGCCAAACGTTCCTGAAAACTGATGCTGATTTCCTAGAGTCAGTGTCTTCTAATCCTTTTAGGGATGATGGTTCAACAGCTGTGACTGCTATTTTGGTTGGCAACCACCTATATGTTGGTAATGTTGGTGATTCACGTGTTGTCGCTCTAAAAGCTGGCAAAGCTGTCCCACTGTCAGAAGATCATAAACCTAACAGAAAAGATGAGCAGAAGAGAATTGAGGATGCCGGAGGTATTGTTGTTTTCGATGATACATGGAGGGTTAATGGACTTTTGGCAATGTCCCGTGCATTTGGCAACCGTGCATTGAAGCACTATGTGAAAGCAGAACCAGATATTCAGGAAAAAGTGGTCGATGAAAGCTTGGAATACCTGATTCTTGCTACTGATGGCCTTTGGGATGTTATGCGAAATGAGGATGCTGTTTCTCTTTTGAAAGCGCAAGATGGACCCAAAGCAGCAGCCATGAAGCTGACAGAAGTCGCCCACTCTCGGCTTACCTTAGACAACATCACATGCATCGTGCTGCAGTTTCACCATGGAAAATCAACCAACAGCAACTGATGTTAACAAAGTTTTGTCACCAGATATCTTGAAACGAGAGTTGGTCCCCTGATCCGCGGTTCTACAAGATTATTACTAGATTGGTTGAGTCGTTTTTTTCGTCATGTAGGAAGCTTTTAAATCTGACGTGCACAGTTTACTAGCGAAACGTCTTATGGTTGTTTGATTTCGGTTTCGGATCTCTTGCTATTAGGGGTAGCCGGCCCTGAAATATTAAGTTATCTATAGCATAAGAAATGTTCTAAATTT ]
[+] EMBL OSR26331A            [                               GAGAGACGCTCGCCTTCCGTCTCCTGACGCGCACACGCCACCAACACCGCGACGCGACGCGACG GAGCGCCAAACGTGAGCGCGGAAAGAGGAGAGGTGAGGTGAGGTGCGTGGCCCTTGGACTTTCGAGGCGAAACCCCGCGTGCGTNCGTATATNAGATCCACATCCGGCGCCCGCCCCAGCAGCGGTGGAGGAGGAGGGGACGACGACTACGCCTTCTACTACTCTTTCTTCCAGGACGCCGCCGCCGCCGCCGCGTCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU069551             [                                aaAGACGCTCGCTTTCCGTTTCCTGACGCGCACACGCCACCAACACCGCNACG GACG GACG GAGCCCCAAACGTAAGCNCGGAAAGAGGAGAGGTGAGGTGAGGTGCGTGGCCCTTGGACTTTCGAGGCGAAACCCCGCGTGCTTGCTTATATAAAATCCACATCCGGCGCCCGNCCCAGCAGCGGTGGAGGAGGAGGGGACGACGACTACGGCTTCTACTACTCTTTTTTCCAGGACGCCGCCGCCGCCGCCGCGTCGCCGCTCGGNCTCGACGACGCCGCCGCTATGACCAACGGTGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BE230417             [                                                                                                                                                                                                                                          GACGACGACTACGCCTTCTACTACTCTTTCTTCCAGGACGCCGCCGCCGCCGCCGCGTCGCCGCTTGGCCTCGACGACGCCGCCGCTATGACCAACGGTGGACGGAAGCGGAAGAGGGGAGGAGGAGGGGATGGGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB642038             [                                                                                                                                                                                                                                                                                                                                                                                                  CGCCGCGTCCAGGAAGGATGGGCCTGGAGGGGACGGTGAGGGGGGAAACGGCAGGAAGCGGTCCATCGCCAAGATACTCACCTCGCTCGCCGCGCTCGAGGCGGAGGAGCACTCCGACCGCGCCGGCGCCGCCGACGCCTCCCGCAAGGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU172481             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATACTCACCTCGCTCGCCGCGCTCGAGGCGGAGGAGCACTCCGACCGCGCCGGCGCCGCCGACGCCTCCCGCCGGGAGCTCGCGCTGCTCGAGTCCAACGCCGACCACAAGTCGCAGGCCATGATGGACTACTACGCCAAGATGGAGGGGAGCTTCGACGCCGCCGCGGAGTCGGACGCCACCGCGCGGTCCAAGCGCTCGCGCCTCGCCGCGTCGGCCACCACGGCGGCGGTCGTGGCTACCGAGGAGGGGGCCGCCGAGACGGCCTCCGCGTCGGCGTCGCCGT CGCGAGCGAGCGGCGGCGGGGGCGCGGGGCACCACCAGCGGCGGCTGTGGGTGAAGGACCGGTCGCGGGCGTGGTGGGACAAATGCAACAGCCCGGACTACCCGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C72770               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACTCACCTCGCTCGCCGCGCTCGAGGCGGAGGAGCACTCCGACCGCGCCGGCGCCG CGACGCCTCCCGCCGGGAGCTCGCGCTGCTCGAGTCCAACGCCGACCACAAGTCGCAGGCCATGATGGACTACTACGCCAAGATGGAGGGGAGCTTCGACGCCGCCGCGGAGTCGGACGCCACCGCGCGGTCCAAGCGCTCGCGCCTCGCCGCGTCGGCCACCACGGCGGCGGTCGTGGCTACCGAGGAGGGGGCCGCCGAGACGG CTCCGCGTCGGCGTCG CGTCCGCGAGCGAGCGGCGGCGGGGGCGCGGGGCAACACCAGCGGCGGCTGTGGGTNAAGGACCGGTCGCGGGCGTGGTGGGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB637855             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGAACCAGATATTCAGGAAAAAGTGGTCGATGAAAGCTTGGAATACCTGATTCTTGCTACTGATGGCCTTTGGGATGTTATGCGAAATGAGGATGCTGTTTCTCTTTTGAAAGCGCAAGATGGACCCAAAGCAGCAGCCATGAAGCTGACAGAAGTCGCCCACTCTCGGCTTACCTTAGACAACATCACATGCATCGTGCTGCAGTTTCACCATGGAAAATCAACCAACAGCAACTGATGTTAACAAAGTTTTGTCACCAGATATCTTGAAACGAGAGTTGGTCCCCTGATCCGCGGTTCTACAAGATTATTACTAGATTGGTTGAGTCGTTTTTTTCGTCATGTAGGAAGCTTTTAAATCTGACGTGCACAGTTTACTAGCGAAACGTCTTATGGTTGTTTGATTTCGGTTTCGGATCTCTTGCTATTAGGGGTAGCCGGCCCTGAAATATTAAGTTATCTATAGCATAAGAAA GTTCTAATTTTT]


>consensus_11949#0 CCGATCCTCTCATCCACCACCACCATCGCAAGAGAGACGCTCGCCTTCCGTCTCCTGACG CGCACACGCCACCAACACCGCGACGCGACGCGACGGAGCGCCAAACGTGAGCGCGGAAAG AGGAGAGGTGAGGTGAGGTGCGTGGCCCTTGGACTTTCGAGGCGAAACCCCGCGTGCGTG CGTATATGAGATCCACATCCGGCGCCCGCCCCAGCAGCGGTGGAGGAGGAGGGGACGACG ACTACGCCTTCTACTACTCTTTCTTCCAGGACGCCGCCGCCGCCGCCGCGTCGCCGCTCG GCCTCGACGACGCCGCCGCTATGACCAACGGTGGACGGAAGCGGAAGAGGGGAGGAGGAG GGGATGGGGCGGACGGCGGCGCCCCCGCCGCGTCCAGGAAGGATGGGCCTGGAGGGGACG GTGAGGGGGGAAACGGCAGGAAGCGGTCCATCGCCAAGATACTCACCTCGCTCGCCGCGC TCGAGGCGGAGGAGCACTCCGACCGCGCCGGCGCCGCCGACGCCTCCCGCCGGGAGCTCG CGCTGCTCGAGTCCAACGCCGACCACAAGTCGCAGGCCATGATGGACTACTACGCCAAGA TGGAGGGGAGCTTCGACGCCGCCGCGGAGTCGGACGCCACCGCGCGGTCCAAGCGCTCGC GCCTCGCCGCGTCGGCCACCACGGCGGCGGTCGTGGCTACCGAGGAGGGGGCCGCCGAGA CGGCCTCCGCGTCGGCGTCGCCGTCGCGAGCGAGCGGCGGCGGGGGCGCGGGGCACCACC AGCGGCGGCTGTGGGTGAAGGACCGGTCGCGGGCGTGGTGGGACAAATGCAACAGCCCGG ACTACCCGGAGGAGGAGTTCCGTCGCGCGTTCCGGATGGGGCGCGAGACGTTCGACATGA TCTGCGAGGCGCTGGGCTCCGCGGTGGCCAAGGAGGACACCATGCTCCGCGCCGCCATCC CCGTGCGCCAGCGCGTCGCCGTCTGCATCTGGCGCCTCGCCACGGGCGAGCCGCTCCGCC TCGTCTCCAAGCGCTTCGGCCTCGGGATCTCCACCTGCCACAAGCTCGTCCTCGAGGTGT GCGCCGCCATCAAGTCCGTCCCCTCCCCCGGCGGTACTCCAGCGGCCTCCCGCGGGCTCC CCGGCTGGCCGGGGTTCTGCGGGGTGGGCTGCGGCTCCTCGTCGTCGTCGTCGTTTGCTC CGCCGCGGATGCAGGCCCGGCGGGCCGCGGGGTCGGCTGCGCGCACGCGGTCGCCGTCGC AGTCCAACGGCTGGATTACCGGCGGCTCCGCGAGTGAGGATGGTAGACTTAGCTGGGATT ATTCAAGTTTCAAGGGGAGGAGGCCTTCTATGGAGGATCGGTTTAGCATAAAGATGACTA CGATCAACGAACAGACAGTCAGCCTATTTGGTGTATTTGATGGTCATGGAGGATCACTTG CTGCTGAATATCTTAAGGAACATTTGTTTGAAAACCTTGTGAATCACCCTGAGCTCCTTA GAGACACAAAGCTTGCTATAAGCCAAACGTTCCTGAAAACTGATGCTGATTTCCTAGAGT CAGTGTCTTCTAATCCTTTTAGGGATGATGGTTCAACAGCTGTGACTGCTATTTTGGTTG GCAACCACCTATATGTTGGTAATGTTGGTGATTCACGTGTTGTCGCTCTAAAAGCTGGCA AAGCTGTCCCACTGTCAGAAGATCATAAACCTAACAGAAAAGATGAGCAGAAGAGAATTG AGGATGCCGGAGGTATTGTTGTTTTCGATGATACATGGAGGGTTAATGGACTTTTGGCAA TGTCCCGTGCATTTGGCAACCGTGCATTGAAGCACTATGTGAAAGCAGAACCAGATATTC AGGAAAAAGTGGTCGATGAAAGCTTGGAATACCTGATTCTTGCTACTGATGGCCTTTGGG ATGTTATGCGAAATGAGGATGCTGTTTCTCTTTTGAAAGCGCAAGATGGACCCAAAGCAG CAGCCATGAAGCTGACAGAAGTCGCCCACTCTCGGCTTACCTTAGACAACATCACATGCA TCGTGCTGCAGTTTCACCATGGAAAATCAACCAACAGCAACTGATGTTAACAAAGTTTTG TCACCAGATATCTTGAAACGAGAGTTGGTCCCCTGATCCGCGGTTCTACAAGATTATTAC TAGATTGGTTGAGTCGTTTTTTTCGTCATGTAGGAAGCTTTTAAATCTGACGTGCACAGT TTACTAGCGAAACGTCTTATGGTTGTTTGATTTCGGTTTCGGATCTCTTGCTATTAGGGG TAGCCGGCCCTGAAATATTAAGTTATCTATAGCATAAGAAATGTTCTAAATTTT



consensusID : consensus_11949#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 383
fasta sequence
                              [CACCGCTGCGCCGCCCGCGAAGGCCGAAGCGGCGGAGGGGGCCTCGCCGGAGCGCTGCTCAGGAGGATGGCGCGCGCCGCCGGCCTGCGGGCTCTGGTCGGCATTGAGGCGGCGGGGCGTGGGCGCCGCGTCGCCGCCTCCCCCTCCCCCGGCGGTACTCCAGCGGCCTCCCGCGGGCTCCCCGGCTGGCCGGGGTTCTGCGGGGTGGGCTGCGGCTCCTCGTCGTCGTCGTCGTTTGCTCCGCCGCGGATGCAAGCCCGGCGGGCCGCGGGGTCNGCTGCGCGCACGCGGTCGCCGTCGCAGTCCAACGGCTGGATTACCGGCGGCTCCGCGAGTGAGGATGGTACACTTACCTGGGATTATTCAAGTTTCAAGGGGAGGAG]

[+] EMBL CB637854             [CACCGCTGCGCCGCCCGCGAAGGCCGAAGCGGCGGAGGGGGCCTCGCCGGAGCGCTGCTCAGGAGGATGGCGCGCGCCGCCGGCCTGCGGGCTCTGGTCGGCATTGAGGCGGCGGGGCGTGGGCGCCGCGTCGCCGCCTCCCCCTCCCCCGGCGGTACTCCAGCGGCCTCCCGCGGGCTCCCCGGCTGGCCGGGGTTCTGCGGGGTGGGCTGCGGCTCCTCGTCGTCGTCGTCGTTTGCTCCGCCGCGGATGCAAGCCCGGCGGGCCGCGGGGTCNGCTGCGCGCACGCGGTCGCCGTCGCAGTCCAACGGCTGGATTACCGGCGGCTCCGCGAGTGAGGATGGTACACTTACCTGGGATTATTCAAGTTTCAAGGGGAGGAG]


>consensus_11949#1 CACCGCTGCGCCGCCCGCGAAGGCCGAAGCGGCGGAGGGGGCCTCGCCGGAGCGCTGCTC AGGAGGATGGCGCGCGCCGCCGGCCTGCGGGCTCTGGTCGGCATTGAGGCGGCGGGGCGT GGGCGCCGCGTCGCCGCCTCCCCCTCCCCCGGCGGTACTCCAGCGGCCTCCCGCGGGCTC CCCGGCTGGCCGGGGTTCTGCGGGGTGGGCTGCGGCTCCTCGTCGTCGTCGTCGTTTGCT CCGCCGCGGATGCAAGCCCGGCGGGCCGCGGGGTCNGCTGCGCGCACGCGGTCGCCGTCG CAGTCCAACGGCTGGATTACCGGCGGCTCCGCGAGTGAGGATGGTACACTTACCTGGGAT TATTCAAGTTTCAAGGGGAGGAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11949#0      CCGATCCTCTCATCCACCACCACCATCGCAAGAGAGACGCTCGCCTTCCGTCTCCTGACG 60
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      CGCACACGCCACCAACACCGCGACGCGACGCGACGGAGCGCCAAACGTGAGCGCGGAAAG 120
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      AGGAGAGGTGAGGTGAGGTGCGTGGCCCTTGGACTTTCGAGGCGAAACCCCGCGTGCGTG 180
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      CGTATATGAGATCCACATCCGGCGCCCGCCCCAGCAGCGGTGGAGGAGGAGGGGACGACG 240
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      ACTACGCCTTCTACTACTCTTTCTTCCAGGACGCCGCCGCCGCCGCCGCGTCGCCGCTCG 300
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      GCCTCGACGACGCCGCCGCTATGACCAACGGTGGACGGAAGCGGAAGAGGGGAGGAGGAG 360
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      GGGATGGGGCGGACGGCGGCGCCCCCGCCGCGTCCAGGAAGGATGGGCCTGGAGGGGACG 420
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      GTGAGGGGGGAAACGGCAGGAAGCGGTCCATCGCCAAGATACTCACCTCGCTCGCCGCGC 480
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      TCGAGGCGGAGGAGCACTCCGACCGCGCCGGCGCCGCCGACGCCTCCCGCCGGGAGCTCG 540
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      CGCTGCTCGAGTCCAACGCCGACCACAAGTCGCAGGCCATGATGGACTACTACGCCAAGA 600
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      TGGAGGGGAGCTTCGACGCCGCCGCGGAGTCGGACGCCACCGCGCGGTCCAAGCGCTCGC 660
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      GCCTCGCCGCGTCGGCCACCACGGCGGCGGTCGTGGCTACCGAGGAGGGGGCCGCCGAGA 720
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      CGGCCTCCGCGTCGGCGTCGCCGTCGCGAGCGAGCGGCGGCGGGGGCGCGGGGCACCACC 780
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      AGCGGCGGCTGTGGGTGAAGGACCGGTCGCGGGCGTGGTGGGACAAATGCAACAGCCCGG 840
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      ACTACCCGGAGGAGGAGTTCCGTCGCGCGTTCCGGATGGGGCGCGAGACGTTCGACATGA 900
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      TCTGCGAGGCGCTGGGCTCCGCGGTGGCCAAGGAGGACACCATGCTCCGCGCCGCCATCC 960
consensus_11949#1      --------------------------------------------CACCGCTGCGCCGCCC 16
                                                                   * ****  ****  **

consensus_11949#0      CCGTGCGCCAGCGCGTCGCCGTCTGCATCTGGCGCCTCGCCACGGGCGAGCCGCTCCGCC 1020
consensus_11949#1      GCGAAGGCCGAAGCGGCGGAG---------GGGGCCTCGCC---GGAGCGCTGCTCAGGA 64
                        **   ***   *** **  *         ** ********   ** * ** **** *  

consensus_11949#0      TCGTCTCCAAGCGCTTCGGCCTCGGGATCTCCACCTGCCACAAGCTCGTCCTCGAGGTGT 1080
consensus_11949#1      GGATGGC-GCGCGCCGCCGGCCTGCGGGCTCTGGTCGGCATTGAGGCGGCGG-GGCGTGG 122
                          *  *   ****  * * *  * *  ***     * **      ** *   *  *** 

consensus_11949#0      GCGCCGCCATCAAGTCCGTCCCCTCCCCCGGCGGTACTCCAGCGGCCTCCCGCGGGCTCC 1140
consensus_11949#1      GCGCCGC-GTCGCCGCCTCCCCCTCCCCCGGCGGTACTCCAGCGGCCTCCCGCGGGCTCC 181
                       *******  **    **  *****************************************

consensus_11949#0      CCGGCTGGCCGGGGTTCTGCGGGGTGGGCTGCGGCTCCTCGTCGTCGTCGTCGTTTGCTC 1200
consensus_11949#1      CCGGCTGGCCGGGGTTCTGCGGGGTGGGCTGCGGCTCCTCGTCGTCGTCGTCGTTTGCTC 241
                       ************************************************************

consensus_11949#0      CGCCGCGGATGCAGGCCCGGCGGGCCGCGGGGTCGGCTGCGCGCACGCGGTCGCCGTCGC 1260
consensus_11949#1      CGCCGCGGATGCAAGCCCGGCGGGCCGCGGGGTCNGCTGCGCGCACGCGGTCGCCGTCGC 301
                       ************* ******************** *************************

consensus_11949#0      AGTCCAACGGCTGGATTACCGGCGGCTCCGCGAGTGAGGATGGTAGACTTAGCTGGGATT 1320
consensus_11949#1      AGTCCAACGGCTGGATTACCGGCGGCTCCGCGAGTGAGGATGGTACACTTACCTGGGATT 361
                       ********************************************* ***** ********

consensus_11949#0      ATTCAAGTTTCAAGGGGAGGAGGCCTTCTATGGAGGATCGGTTTAGCATAAAGATGACTA 1380
consensus_11949#1      ATTCAAGTTTCAAGGGGAGGAG-------------------------------------- 383
                       **********************                                      

consensus_11949#0      CGATCAACGAACAGACAGTCAGCCTATTTGGTGTATTTGATGGTCATGGAGGATCACTTG 1440
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      CTGCTGAATATCTTAAGGAACATTTGTTTGAAAACCTTGTGAATCACCCTGAGCTCCTTA 1500
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      GAGACACAAAGCTTGCTATAAGCCAAACGTTCCTGAAAACTGATGCTGATTTCCTAGAGT 1560
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      CAGTGTCTTCTAATCCTTTTAGGGATGATGGTTCAACAGCTGTGACTGCTATTTTGGTTG 1620
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      GCAACCACCTATATGTTGGTAATGTTGGTGATTCACGTGTTGTCGCTCTAAAAGCTGGCA 1680
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      AAGCTGTCCCACTGTCAGAAGATCATAAACCTAACAGAAAAGATGAGCAGAAGAGAATTG 1740
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      AGGATGCCGGAGGTATTGTTGTTTTCGATGATACATGGAGGGTTAATGGACTTTTGGCAA 1800
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      TGTCCCGTGCATTTGGCAACCGTGCATTGAAGCACTATGTGAAAGCAGAACCAGATATTC 1860
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      AGGAAAAAGTGGTCGATGAAAGCTTGGAATACCTGATTCTTGCTACTGATGGCCTTTGGG 1920
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      ATGTTATGCGAAATGAGGATGCTGTTTCTCTTTTGAAAGCGCAAGATGGACCCAAAGCAG 1980
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      CAGCCATGAAGCTGACAGAAGTCGCCCACTCTCGGCTTACCTTAGACAACATCACATGCA 2040
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      TCGTGCTGCAGTTTCACCATGGAAAATCAACCAACAGCAACTGATGTTAACAAAGTTTTG 2100
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      TCACCAGATATCTTGAAACGAGAGTTGGTCCCCTGATCCGCGGTTCTACAAGATTATTAC 2160
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      TAGATTGGTTGAGTCGTTTTTTTCGTCATGTAGGAAGCTTTTAAATCTGACGTGCACAGT 2220
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      TTACTAGCGAAACGTCTTATGGTTGTTTGATTTCGGTTTCGGATCTCTTGCTATTAGGGG 2280
consensus_11949#1      ------------------------------------------------------------
                                                                                   

consensus_11949#0      TAGCCGGCCCTGAAATATTAAGTTATCTATAGCATAAGAAATGTTCTAAATTTT 2334
consensus_11949#1      ------------------------------------------------------
                                                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)