cluster # 11950

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Oryza sativa
cluster # 11950 cluster # 11950 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11950#0 length = 1002 sequences # 9
consensusID : consensus_11950#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1002
fasta sequence
                              [GGACTGAAGGAGTAACGCATACTCTCCCCTCTGACTCTTTGCGCCAAGTCAATCTCCCCGTCTGTCTTCTCGGCCTCAACTCCCGTCTCCTCGCTAGTTCGCCCGCCGCGCCGCCTGCGTCGATTTCAGTCCATCCTGCGGAGGGGAGCAGCGGTGGGTGCCGTCCTCCTGCTGCTTCCGCCTCC--------GGTAATTAGGTTTGTTCGTTGAGACGACATGCCTAAGATAAAGACAAGCCGTGTCAAGTATCCTGAAGGATGGGAGCTTATAGAACCAACTCTGCGTGATTTGGAAGCCAAGATGAGGGAAGCCGAGAATGATCCACATGATGGGAAGAGGAAGTGCGAAGCTCTCTGGCCAATCTTTCGTATTTCTCATCAAAAAAGCCGTTACATATATGATCTTTACTATCGAAGAAAGGAGATATCAAAAGAGCTGTATG-AATTTTGTTTGGACCAAGGT-CATGCTGATAAAAATCTGATCGCGAAGTGGAAAAAGCCAGGTTATGAGCGTCTTTGCTGCCTCCGATGCATACAGACACGAGACCACAACTTTGCAACCACTTGTGTC-TGTAGGGTCCCCAAGCACCTCAGGGAAGAAAAGGTTATAGAGTGTGTCCATTGTGGGTGCAGAGGGTGTGCCAGTGGTGATTGAAGTCGCTGTCCTGTGGCTACAAATAATCTGAGAGTAATCGCTCGAGATGTTTCCTTGTGTTTGATCTCTGTTAAGACAAGCACCATATGACCATATAATCAGGCGATTCGTGTGGTGTACTGTAAACTCTTGGGCTATGGCATGTGTCTGGTGAGTAATGACGATTTCTCAACATGTTGTGTTCGCAAATGGTTCAGTAGAAACTAGCTGGAAGTTTGATGGATTACTGTACCCCGCTAGACCTACTTACTACAATACTACTGTATGAACACTTCCTTGCTACAGAGGTATTAGGATGATGTTGAGTTATCAGGTTTTCTGCAATAAAAAATATCACGCTTTTTGGAAAAA]

[+] EMBL CF294540             [GGACTGAAGGAGTAGAAAATACTCTCCCCTCTGACTCTTTGCGCCAAGTCAATCTCCCCGTCTGTCTTCTCGGCCTCAACTCCCGTCTCCTCGCTAGTTCGCCCGCCGCGCCGCCTGCGTCGATTTCAGTCCATCCTGCGGAGGGGAGCAGCGGTGGGTGCCGTCCTCCTGCTGCTTCCGCCTCCGGTATTTAGGTAATTAGGTTTGTGCGTTGAGACGACATGCCTAAGATAAAGACAAGCCGTGTCAAGTATCCTGAAGGATGGGAGCTTATAGAACCAACTCTGCGTGATTTGGAAGCCAAGATGAGGGAAGCCGAGAATGATCCACATGATGGGAAGAGGAAGTGCGAAGCTCTCTGGCCAATCTTTCGTATTTCTCATCAAAAAAGCCGTTACATATATGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK066998             [              ACGCATACTCTCCCCTCTGACTCTTTGCGCCAAGTCAATCTCCCCGTCTGTCTTCTCGGCCTCAACTCCCGTCTCCTCGCTAGTTCGCCCGCCGCGCCGCCTGCGTCGATTTCAGTCCATCCTGCGGAGGGGAGCAGCGGTGGGTGCCGTCCTCCTGCTGCTTCCGCCTCC        GGTAATTAGGTTTGTTCGTTGAGACGACATGCCTAAGATAAAGACAAGCCGTGTCAAGTATCCTGAAGGATGGGAGCTTATAGAACCAACTCTGCGTGATTTGGAAGCCAAGATGAGGGAAGCCGAGAATGATCCACATGATGGGAAGAGGAAGTGCGAAGCTCTCTGGCCAATCTTTCGTATTTCTCATCAAAAAAGCCGTTACATATATTATCTTTACTATCGAAGAAAGGAGATATCAAAAGAGCTGTATG AATTTTGTTTGGACCAAGGT CATGCTGATAAAAATCTGATCGCGAAGTGGAAAAAGCCAGGTTATGAGCGTCTTTGCTGCCTCCGATGCATACAGACACGAGACCACAACTTTGCAACCACTTGTGTC TGTAGGGTCCCCAAGCACCTCAGGGAAGAAAAGGTTATAGAGTGTGTCCATTGTGGGTGCAGAGGGTGTGCCAGTGGTGATTGAAGTCGCTGTCCTGTGGCTACAAATAATCTGAGAGTAATCGCTCGAGATGTTTCCTTGTGTTTGATCTCTGTTAAGACAAGCACCATATGACCATATAATCAGGCGATTCGTGTGGTGTACTGTAAACTCTTGGGCTATGGCATGTGTCTGGTGAGTAATGACGATTTCTCAACATGTTGTGTTCGCAAATGGTTCAGTAGAAACTAGCTGGAAGTTTGATGGATTACTGTACCCCGCTAGACCTACTTACTACAATACTACTGTATGAACACTTCCTTGCTACAGAGGTATTAGGATGATGTTGAGTTAT                                         ]
[+] EMBL CF282375             [              ACGCATACTCTCCCCTCTGACTCTTTGCGCCAAGTCAATCTCCCCGTCTGTCTTCTCGGCCTCAACTCCCGTCTCCTCGCTAGTTCGCCCGCCGCGCCGCCTGCGTCGATTTCAGTCCATCCTGCGGAGGGGAGCAGCGGTGGGTGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF327042             [                   TACTCTCCCCTCTGACTCTTTGCGCCAAGTCAATCTCCCCGTCTGTCTTCTCGGCCTCAACTCCCGTCTCCTCGCTAGTTCGCCCGCCGCGCCGCCTGCGTCGATTTCAGTCCATCCTGCGGAGGGGAGCAGCGGTGGGTGCCGTCCTCCTGCTGCTTCCGCCTCC        GGTAATTAGGTTTGTTCGTTGAGACGACATGCCTAAGATAAAGACAAGCCGTGTCAAGTATCCTGAAGGATGGGAGCTTATAGAACCAACTCCGCGTGATTTGGAAGCCAAGATGAGGGAAGCCGAGAATGATCCACATGATGGGAAGAGGAAGTGCGAAGCTCTCTGGCCAATCTTTCGTATTTCTCATCAAAAAAGCCGTTACATATATGATCTTTACTATCGAAGAAAGGAGATATCAAAAGAGCTGTATG AATTTTGTTTGGACCAAGGT CATGCTGATAAAAATCTGATCGCGAAGTGGAAAAAGCCAGGTTATGAGCGTCTTTGCTGCCTCCGATGCATACAGACACGAGACCACAACTTTGCAACCACTTGTGTC TGTAGGGTCCC                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF282118             [                                                          CGTCTGTCTTCTCGGCCTCAACTCCCGTCTCCTCGCTAGTTCGCCCGCCGCGCCGCCTGCGTCGATTTCAGTCCATCCTGCGGAGGGGAGCAGCGGTGGGTGCCGTCCTCCTGCTGCTTCCGCCTCC        GGTAATTAGGTTTGTTCGTTGAGACGACATGCCTAAGATAAAGACAAGCCGTGTCAAGTATCCTGAAGGATGGGAGCTTATAGAACCAACTCTGCGTGATTTGGAAGCCAAGATGAGGGAAGCCGAGAATGATCCACATGATGGGAAGAGGAAGTGCGAAGCTCTCTGGCCAATCTTTCGTATTTCTCATCAAAAAAGCCGTTACATATATGATCTTTACTATCGAAGAAAGGAGATATCAAAAGAGCTGTATGNAATTTTGTTTGGACCAAGGT CATGCTGATAAAAATCTGATCGCGAAGTGGAAAAAGCCAGGTTATGAGCGTCTTTGCTGCCTCCGATGCATACAGACACGAGACCACAACTTTGCAACCACTTGTGTCTTGTAGGGTCCCCAAGCACCTCAG                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM419372             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGTCCATCCTGATAAAAATCTGATC CGAAGTGGAAAAAGCCAGGTTATGAGCGTCTTTGCTGCCTCCGATGCATACAGACACGAGACCACAACTTTGCGACCACTTGTGTC TGTAGGGTCCCCAAGCACCTCAGGGAAGAAAAGGTTATAGAGTGTGTCCATTGTGGGTGCAGAGGGTGTGCCAGTGGTGATTGAAGTCGCTGTCCTGTGGCTACAAATAATCTGAGAGTAATCGCTCGAGATGTTTCATTGTGTTTGATCTCTGTTAAGACAAGCACCATATGACCATATAATCAGGCGATTCGTGTGGTGTACTGTAAACTCTTGGGCTATGGCATGTGTCTGGTGAGTAGTGACGATTTCTCAACATGTTGTGTTCGCAAATGGTTCAGTAGAAACTAGCTGGAAGTTTGATGGATTACTGTACCCCGCTAGACCTACTTACTACAATACTACTGTATGAACCCTTCCTTGCTAaaaaaaaaa                                                            ]
[-] EMBL CF294541             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATGCATACAGACACGAGACCACAACTTTGCAACCACTTGTGTC TGTAGGGTCCCCAAGCACCTCAGGGAAGAAAAGGTTATAGAGTGTGTCCATTGTGGGTGCAGAGGGTGTGCCAGTGGTGATTGAAGTCGCTGTCCTGTGGCTACAAATAATCTGAGAGTAATCGCTCGAGATGTTTCCTTGTGTTTGATCTCTGTTAAGACAAGCACCATATGACCATATAATCAGGCGATTCGTGTGGTGTACTGTAAACCCTTGGGCTATGGCATGTGCCTGGTGAGTAATGACGATTTCTCAACATAAAGAGTTCGCAAATGGTTCAGTAAAAAATAGCTGGAAGTTTGATGGATTACTGTACCCCGCTAGACCTACTTAAAACAATACTACTGTATGAACACTTCCTTGCTACAGAGGTATTAGGATGATGTTGAGTTATCAGGTTTTCTGCAATAAAAAATATCACGCTTTTTGGAAAAA]
[-] EMBL CF282119             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GACACGAGACCACAACTTTGCAACCACTTGTGTC TGTAGGGTCCCCAAGCACCTCAGGGAAGAAAAGGTTATAGAGTGTGTCCATTGTGGGTGCAGAGGGTGTGCCAGTGGTGATTGAAGTCGCTGTCCTGTGGCTACAAATAATCTGAGAGTAATCGCTCGAGATGTTTCCTTGTGTTTGATCTCTGTTAAGACAAGCACCATATGACCATATAATCAGGCGATTCGTGTGGTGTACTGTAAACTCTTGGGCTATGGCATGTGTCTGGTGAGTAATGACGATTTCTCAACATGTTGTGTTCGCAAATGGTTCAGTAGAAACCAGCTGGAAGTTTGATGGATTACTGTACCCCGCTAGACCTACTTACTACAATACTACTGTATGAACACTTCCTTGCTACAGAGGTATTAGGATGATGTTGAGTTATCAGGTTTTCTGCAATATACTGTATCACGCTTaaaaaaaaa ]
[-] EMBL CF282376             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CAAGCACCTCAGGGAAGAAAAGGTTATAGAGTGTGTCCATTGTGGGTGCAGAGGGTGTGCCAGTGGTGATTGAAGTCGCTGTCCTGTGGCTACAAATAATCTGAGAGTAATCGCTCGAGATGTTTCCTTGTGTTTGATCTCTGTTAAGACAAGCACCATATGACCATATAATCAGGCGATTCGTGTGGTGTACTGTAAACTCTTGGGCTATGGCATGTGTCTGGTGAGTAATGACGATTTCTCAACATGTTGTGTTCGCAAATGGTTCAGTAGAAACTAGCTGGAAGTTTGATGGATTACTGTACCCCGCTAGACCTACTTACTACAATACTACTGTATGAACACTTCCTTGCTACAGAGGTATTAGGATGATGTTGAGTTATCAGGTTTTCTGCAAAAAAAAAaaaa                ]




>consensus_11950#0
GGACTGAAGGAGTAACGCATACTCTCCCCTCTGACTCTTTGCGCCAAGTCAATCTCCCCG
TCTGTCTTCTCGGCCTCAACTCCCGTCTCCTCGCTAGTTCGCCCGCCGCGCCGCCTGCGT
CGATTTCAGTCCATCCTGCGGAGGGGAGCAGCGGTGGGTGCCGTCCTCCTGCTGCTTCCG
CCTCCGGTAATTAGGTTTGTTCGTTGAGACGACATGCCTAAGATAAAGACAAGCCGTGTC
AAGTATCCTGAAGGATGGGAGCTTATAGAACCAACTCTGCGTGATTTGGAAGCCAAGATG
AGGGAAGCCGAGAATGATCCACATGATGGGAAGAGGAAGTGCGAAGCTCTCTGGCCAATC
TTTCGTATTTCTCATCAAAAAAGCCGTTACATATATGATCTTTACTATCGAAGAAAGGAG
ATATCAAAAGAGCTGTATGAATTTTGTTTGGACCAAGGTCATGCTGATAAAAATCTGATC
GCGAAGTGGAAAAAGCCAGGTTATGAGCGTCTTTGCTGCCTCCGATGCATACAGACACGA
GACCACAACTTTGCAACCACTTGTGTCTGTAGGGTCCCCAAGCACCTCAGGGAAGAAAAG
GTTATAGAGTGTGTCCATTGTGGGTGCAGAGGGTGTGCCAGTGGTGATTGAAGTCGCTGT
CCTGTGGCTACAAATAATCTGAGAGTAATCGCTCGAGATGTTTCCTTGTGTTTGATCTCT
GTTAAGACAAGCACCATATGACCATATAATCAGGCGATTCGTGTGGTGTACTGTAAACTC
TTGGGCTATGGCATGTGTCTGGTGAGTAATGACGATTTCTCAACATGTTGTGTTCGCAAA
TGGTTCAGTAGAAACTAGCTGGAAGTTTGATGGATTACTGTACCCCGCTAGACCTACTTA
CTACAATACTACTGTATGAACACTTCCTTGCTACAGAGGTATTAGGATGATGTTGAGTTA
TCAGGTTTTCTGCAATAAAAAATATCACGCTTTTTGGAAAAA
clustalw multiple alignements is not computed in this case