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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11960#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1980 fasta sequence
[TCACGCAGCGCGGGAGATCGCGCAAAGAACCGAGAAGAGCTCATCTCATCCACCATCACTCGCGCAGAGAGATCGATAGCCACAGCGCACAAGCAACGCGCCGCCAATCACATGCGCGCGGCGGTGCAGGGGCGGGCACATGCGTGGACGACGACGACGACGACACCGCCGGGCGCGATGAGAGGCCGGGCGCTGGTCCTCGTGGCCGCGCTGCTGCTGCAGCTGCTTCTCCTCGCCGCTGCCGGTGGCGCGGGCGCGGCGGCGACGGAGAGGAAGGCGCACAACTACGAGGACGCGCTGCGGAAGAGCCTGCTCTACTTCGAGGCGCAGCGGTCGGGGCGGCTCCCGCACAACCAGCGCGTCGCGTGGCGCGACCACTCCGGCCTCACCGACGGCCTCGAGCAAGGGGTGGATTTGGTGGGAGGCTACTACGACGCCGGCGACCATGTCAAATTCGGGCTGCCCATGGCGTTCACGGTGACGATGCTGTCGTGGAGCATGATCGAGTACGGCGACGACGTCGAGGCCGCCGGCGAGCTCGGCCACGCGCTCGAGGTCATCAAGTGGGGCACTGACTACTTCATCAAGGCGCACACCAAGCCCAACGAGCTCTGGGCTGAGGTCGGGGACGGCGACACGGATCACTACTGCTGGCAGCGGCCGGAGGACATGACGACGTCGAGGCAGGCGTACAAGGTGGACCGGGAGCGGCCGGGCTCCGACGTCGCCGGCGAGACGGCGGCGGCGATGGCCGCCGCGTCCATCGTCTTCCGCAAGTCCAACCCGCACTACGCGAGCCTCCTCCTGCACCACGCCCAGCAGCTGTTCGAGTTTGCCGACAAGTACAGAGGGAAGTATGACAGCAGTATCGCCGAGGTGAAGAGCTACTACGCGTCGGTGAGCGGGTACAAGGACGAGCTCCTTTGGGCCGCATTGTGGCTGCACCGGGCCACCGGCAAGGCCCATTACCTCGACTACGTCGTGGACAACGCCGACTGCTTCGGTGGCACCGGCTGGGCCATCACCGAGTTCAGCTGGGACGTCAAGTACGCCGGCGTCCAGATCCTCGCCGCAAGACTGCTGCTGAGAGGAGAGCACGAGGAGCGGCACAGGAGCACGCTGGAGCAGTACAGGGCGAAGGCGGAGCACTACGTGTGCGGGTGCCTGGGGCGGAACGCGGACGGCGGCGCGGACGCGAACGTGGAGCGGAGCCCGGGCGGGATGCTGTACGTGAGGCAGTGGAACAACATGCAGTACGTGACCAACGCGGCGTTCCTCCTCGCGGCGTACGCGGACTACCTGGGCGACGACGCGGGCGGCGCCGTGTCGTGCGCGGGCGGCGAGACGGCGGGCGCGGGCGAGGTGGCGGCGCTCGCGAGGGCGCAGGTGGACTACGTGCTGGGCACCAACCCGAGGGGGATCAGCTACCTGGTCGGGTACGGCGCCAAGTACCCGAACAGGGTGCACCACCGCGCCGCGTCCATCGTGCCGTACAAGCACAGCAAGGAGTTCATCGGGTGCACGCAGGGGTTCGACCACTGGTTCGGTCGCCGGAGCTCCAACCCGAACGTCCTCGTCGGCGCCATCGTCGGTGGGCCGGACCGGCGGGACAGGTTCAGGGACAACCGGGAGAACTACATGCAGACGGAGGCGTGCACGTACAACACGGCGCCCATGGTCGGCATGTTCGCCAAGCTGAACAGGATGGCCCGGCAGGAGAGGGAGCAGGAGGAGGTGGCGGCTCCGGCGAGGAGTACGGCGGCCGATGTGTAAATAGATTAGGTTATAGAGGGGGGGCTGTACAATTTTCCCCATTCTTTTGTTCATTTTTCTTCTCCTTCTTTGGAGATCTTCTTTTCACACAGATTGGAAAAATTCATTTTGTATACAAAAAGAGAAAGGGACGGGTGGAGGCATTCGCATGCAAATGTAAATTCGCCACCGGTACATACGAAGAAAAAGAATTTTATCAAAAAAAAA]
[+] EMBL AK099698 [TCACGCAGCGCGGGAGATCGCGCAAAGAACCGAGAAGAGCTCATCTCATCCACCATCACTCGCGCAGAGAGATCGATAGCCACAGCGCACAAGCAACGCGCCGCCAATCACATGCGCGCGGCGGTGCAGGGGCGGGCACATGCGTGGACGACGACGACGACGACACCGCCGGGCGCGATGAGAGGCCGGGCGCTGGTCCTCGTGGCCGCGCTGCTGCTGCAGCTGCTTCTCCTCGCCGCTGCCGGTGGCGCGGGCGCGGCGGCGACGGAGAGGAAGGCGCACAACTACGAGGACGCGCTGCGGAAGAGCCTGCTCTACTTCGAGGCGCAGCGGTCGGGGCGGCTCCCGCACAACCAGCGCGTCGCGTGGCGCGACCACTCCGGCCTCACCGACGGCCTCGAGCAAGGGGTGGATTTGGTGGGAGGCTACTACGACGCCGGCGACCATGTCAAATTCGGGCTGCCCATGGCGTTCACGGTGACGATGCTGTCGTGGAGCATGATCGAGTACGGCGACGACGTCGAGGCCGCCGGCGAGCTCGGCCACGCGCTCGAGGTCATCAAGTGGGGCACTGACTACTTCATCAAGGCGCACACCAAGCCCAACGAGCTCTGGGCTGAGGTCGGGGACGGCGACACGGATCACTACTGCTGGCAGCGGCCGGAGGACATGACGACGTCGAGGCAGGCGTACAAGGTGGACCGGGAGCGGCCGGGCTCCGACGTCGCCGGCGAGACGGCGGCGGCGATGGCCGCCGCGTCCATCGTCTTCCGCAAGTCCAACCCGCACTACGCGAGCCTCCTCCTGCACCACGCCCAGCAGCTGTTCGAGTTTGCCGACAAGTACAGAGGGAAGTATGACAGCAGTATCGCCGAGGTGAAGAGCTACTACGCGTCGGTGAGCGGGTACAAGGACGAGCTCCTTTGGGCCGCATTGTGGCTGCACCGGGCCACCGGCAAGGCCCATTACCTCGACTACGTCGTGGACAACGCCGACTGCTTCGGTGGCACCGGCTGGGCCATCACCGAGTTCAGCTGGGACGTCAAGTACGCCGGCGTCCAGATCCTCGCCGCAAGACTGCTGCTGAGAGGAGAGCACGAGGAGCGGCACAGGAGCACGCTGGAGCAGTACAGGGCGAAGGCGGAGCACTACGTGTGCGGGTGCCTGGGGCGGAACGCGGACGGCGGCGCGGACGCGAACGTGGAGCGGAGCCCGGGCGGGATGCTGTACGTGAGGCAGTGGAACAACATGCAGTACGTGACCAACGCGGCGTTCCTCCTCGCGGCGTACGCGGACTACCTGGGCGACGACGCGGGCGGCGCCGTGTCGTGCGCGGGCGGCGAGACGGCGGGCGCGGGCGAGGTGGCGGCGCTCGCGAGGGCGCAGGTGGACTACGTGCTGGGCACCAACCCGAGGGGGATCAGCTACCTGGTCGGGTACGGCGCCAAGTACCCGAACAGGGTGCACCACCGCGCCGCGTCCATCGTGCCGTACAAGCACAGCAAGGAGTTCATCGGGTGCACGCAGGGGTTCGACCACTGGTTCGGTCGCCGGAGCTCCAACCCGAACGTCCTCGTCGGCGCCATCGTCGGTGGGCCGGACCGGCGGGACAGGTTCAGGGACAACCGGGAGAACTACATGCAGACGGAGGCGTGCACGTACAACACGGCGCCCATGGTCGGCATGTTCGCCAAGCTGAACAGGATGGCCCGGCAGGAGAGGGAGCAGGAGGAGGTGGCGGCTCCGGCGAGGAGTACGGCGGCCGATGTGTAAATAGATTAGGTTATAGAGGGGGGGCTGTACAATTTTCCCCATTCTTTTGTTCATTTTTCTTCTCCTTCTTTGGAGATCTTCTTTTCACACAGATTGGAAAAATTCATTTTGTATACAAAAAGAGAAAGGGACGGGTGGAGGCATTCGCATGCAAATGTAAATTCGCCACCGGTACATACGAAGAAAAA ]
[+] EMBL BI812972 [ ctGTCGGGTAC GCGCCAAGTACCCGAACAGGGTGCACCACCGCGCCGCGTCCATCGT CCGTACAAGCACAGCAAGGAGTTCATCGGGTGCACGCAGGGGTTCGACCACTGGTTC GTCGCCGGAGCTCCAACCCGAACGTCCTCGTCGGCGCCATCGTCGGTGGGCCGGACCGGCGGGACAGGTTCAGGGACAACCGGGAGAACTACATGCAGACGGAGGCGTGCACGTACAACACGGCGCCCATGGTCGGCATGTTCGCCAAGCTGAACAGGATGGCCCGGCAGAAGAGGGAGCAGGAGGAGGTGGCGGCTCCGGCGAGGAGTACGGCGGCCGATGTGTAAATAGATTAGGTTATAGAGGGGGGGCTGTAC ATTTTCCCCATTCTTTTGTTCATTTTTCTTCTCCTTCTTTGGAGATCTTCTTTTCACACA ATTGGAAAAATTCATTTTGTATAC AAAAGAGAAAGGGACGGGTGGAGGCATTCGCATGCAAATGTAAATTCGCCACCGGTACATACGAAGAAAAAGAATTTTATCAAAAAAAAA]
consensusID : consensus_11960#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1586 fasta sequence
[TCACCGTCACCATGCTCTCCTGGGGCGCCATCGACTTCGCCGCCGACATCGCCGCCGCCGGCGAGTGGCGCCACGCCCTCGAGGCCATCAAGTGGGGCACCGACTACTTCGTCAAGGCCCACACCCACCCCTTCGTCTACTGGGCCGAGGTGGGCGACGGCGACACGGACCACTACTGCTGGCAGCGGCCGGAGGACATGACGACGTCGAGGCAGGCCTACCGCGTGGACAGGGACAACCCGGGGTCGGACCTCGCCGGCGAGACGGCGGCGGCGCTCGCGGCGGCGTCCATCGTGTTCCGCCGCTCCGACCCGCACTACTCCCACCTCCTCCTCCACCACGCCCAGCAGCTGTTCGAGTTCGGGGACACCTACAGGGGCAGCTACGACAGCAGCATCGAGGAGGTCCGGAGCTACTACGCGTCGGTCAGCGGCTACCACGACGAGCTCCTGTGGGCGGCGCTCTGGCTCCACCGCGCCACGGGCAAGGAGGAGTACCTCCGCTACGCCGTCGACAACGCCGACTCCTTCGGCGGCGTCGGCTGGGCCATCACCGAGTTCAGCTGGGACGTCAAGTACGCCGGCCTCCAGGTCCTCGCCGCCAAGCTGCTGCTGGACGGCGACCCGCAGGCGGCGGCGCACCGCGGCGTGCTGGAGAAGTACAGGGAGAAGGCGGAGCACTACCTGTGCGCGTGCCTCGGCCGCAACATCAACGGCGCCGACAACGTCGACCGGAGCCCCGGCGGGATGCTCTACGTCCGCCAATGGAACAACCTCCAGTACGCCTCCAGCGCCGCCTTCCTCCTCACCGCCTACTCCCACTACCTCTCCTCCTCCTCCGCCTCCGCCTCCGCGGCCCTCCGCTGCCCCGGTGGCGCGGCGGCGGCGGCGGAGATGGTGTCGCTGGCGAGGTCGCAGGCGGACTACATCCTGGGGCGGAACCCGCTGCGGCTGAGCTACATGGTGGGGTACGGCCGCCGGTACCCCGCCCGGGTGCACCACCGCGGCGCCTCCATCGTGTCCCACAAGGAGGACGGCCGCTTCATCGGGTGCGTGCAGGGGTTCGACGACTGGTTCGGCCGCGGCCGCGCCAACCCCAACGTGCTCGCCGGCGCCATCGTCGGCGGGCCCAGCCGCCGCGACGAGTTCCGCGACGACCGCGCCAACTACATGCAGACCGAGGCCTGCACCTACAACACCGCCCCCATGGTCGCCGTCTTCGCCAGGCTACACCGCCTCACCACCGCCATCACCACGGCGGCCGCGGCGGAGGATCCCGACGGCGGCTCGCCGGATCGGAGGAGTGTAGATAGAAGGTAGTGGTGGTGGTGGTGGTTTTAATTTGGGCGGGAAAAATTCTTTTTTCTTTTCTCGTATACTTTGCCTTCTTTTCTGCTTAAAAACTTCACTAAATTTTTTTGAAGTGTTAATATGAGAGAGAGAGAGGTAAAGAGAGGGGATTTGATTATTATTATTATTATTAGTGAAAAAGAAACAAGAAAAAGATAGTGGATGGGTGTTATAATTAAGGAGGAGATGAAGGTGAAAATTAGTTACTTGTATTTTTGAGGTTAGGTCTAAGAAGTC]
[+] EMBL AK105580 [TCACCGTCACCATGCTCTCCTGGGGCGCCATCGACTTCGCCGCCGACATCGCCGCCGCCGGCGAGTGGCGCCACGCCCTCGAGGCCATCAAGTGGGGCACCGACTACTTCGTCAAGGCCCACACCCACCCCTTCGTCTACTGGGCCGAGGTGGGCGACGGCGACACGGACCACTACTGCTGGCAGCGGCCGGAGGACATGACGACGTCGAGGCAGGCCTACCGCGTGGACAGGGACAACCCGGGGTCGGACCTCGCCGGCGAGACGGCGGCGGCGCTCGCGGCGGCGTCCATCGTGTTCCGCCGCTCCGACCCGCACTACTCCCACCTCCTCCTCCACCACGCCCAGCAGCTGTTCGAGTTCGGGGACACCTACAGGGGCAGCTACGACAGCAGCATCGAGGAGGTCCGGAGCTACTACGCGTCGGTCAGCGGCTACCACGACGAGCTCCTGTGGGCGGCGCTCTGGCTCCACCGCGCCACGGGCAAGGAGGAGTACCTCCGCTACGCCGTCGACAACGCCGACTCCTTCGGCGGCGTCGGCTGGGCCATCACCGAGTTCAGCTGGGACGTCAAGTACGCCGGCCTCCAGGTCCTCGCCGCCAAGCTGCTGCTGGACGGCGACCCGCAGGCGGCGGCGCACCGCGGCGTGCTGGAGAAGTACAGGGAGAAGGCGGAGCACTACCTGTGCGCGTGCCTCGGCCGCAACATCAACGGCGCCGACAACGTCGACCGGAGCCCCGGCGGGATGCTCTACGTCCGCCAATGGAACAACCTCCAGTACGCCTCCAGCGCCGCCTTCCTCCTCACCGCCTACTCCCACTACCTCTCCTCCTCCTCCGCCTCCGCCTCCGCGGCCCTCCGCTGCCCCGGTGGCGCGGCGGCGGCGGCGGAGATGGTGTCGCTGGCGAGGTCGCAGGCGGACTACATCCTGGGGCGGAACCCGCTGCGGCTGAGCTACATGGTGGGGTACGGCCGCCGGTACCCCGCCCGGGTGCACCACCGCGGCGCCTCCATCGTGTCCCACAAGGAGGACGGCCGCTTCATCGGGTGCGTGCAGGGGTTCGACGACTGGTTCGGCCGCGGCCGCGCCAACCCCAACGTGCTCGCCGGCGCCATCGTCGGCGGGCCCAGCCGCCGCGACGAGTTCCGCGACGACCGCGCCAACTACATGCAGACCGAGGCCTGCACCTACAACACCGCCCCCATGGTCGCCGTCTTCGCCAGGCTACACCGCCTCACCACCGCCATCACCACGGCGGCCGCGGCGGAGGATCCCGACGGCGGCTCGCCGGATCGGAGGAGTGTAGATAGAAGGTAGTGGTGGTGGTGGTGGTTTTAATTTGGGCGGGAAAAATTCTTTTTTCTTTTCTCGTATACTTTGCCTTCTTTTCTGCTTAAAAACTTCACTAAATTTTTTTGAAGTGTTAATATGAGAGAGAGAGAGGTAAAGAGAGGGGATTTGATTATTATTATTATTATTAGTGAAAAAGAAACAAGAAAAAGATAGTGGATGGGTGTTATAATTAAGGAGGAGATGAAGGTGAAAATTAGTTACTTGTATTTTTGAGGTTAGGTCTAAGAAGTC]
consensusID : consensus_11960#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1577 fasta sequence
[AGACAGCCCACCACACCACACCACTTCTCCCACCATCGATCCAACACCCCAACTGCTGCTACCACCTCCCCCATCTCCGCCGCCGCCGGCGAGCTCGCCCACGCCCTCGACGCCATCAAGTGGGGCACCGACTACTTCATCAAAGCCCATACCAAGCCCCACGAGCTCTGGGCCGAGGTGGGAGACGGCGACACCGACCACTACTGCTGGCAGCGGCCGGAGGACATGACGACGTCGAGGCAGGCGTACAAGGTGGACCGCCGCCGCCCGGGATCCGACGTCGCCGGCGAGACCGCCGCCGCCATGGCCGCCGCCTCCATCGTCTTCCGCCAATCCAACCCGCACTACTCCCACCTCCTCCTCCACCACGCCCAGCAGCTGTTCGAGTTCGCGGACACGTACAGGGGGAAGTATGACAGTAGCATAGCGGAGGTGAAGAGCTACTACGCGTCGGTGAGCGGGTACCACGACGAGCTCCTGTGGGCGGCGCTGTGGCTGCACCGCGCCACCGGCCGCGCCGCCTACCTCGACTACGCCGTCGACAACGCCGACGAGTTCGGCGGCACCGGCTGGGCCATCACCGAGTTCAGCTGGGACGTCAAGTACGCCGGCGTCCAGATCCTCGCCGCCAGACTGCTGATGAGAGGGGAGCACGAGGAGAGGCACAGGGGGACGCTGGAGAGGTACAGGGAGAAGGCGGAGCACTACGTGTGCGCGTGCATGGGGCGGAACGCGGCCGGCGGCGCGGACGCCAACGTGGAGCGGAGCCCCGGCGGGATGCTGTACGTGCGGCAGTGGAACAACATGCAGTACGTCACCAACGCCGCGTTCCTCCTCTCCGCCTACTCGGACTACCTCGCCGGCGCCGGAGACGGAGACGGGGACGGCGGCGGCGGCGTCGCGACGTGCGTGGGCGGCGGGGGCGCGGGCGCCGGGGAGGTGTTCGCGGCGGCGAGGGAGCAGGTGGACTACGTGCTGGGGAGCAACCCGCGCGGGATGAGCTACCTCGTCGGCTACGGCGAGAGGTTCCCGGCGAGGGTGCACCACCGGGCGGCGTCGATCGTGCCGTACAAGGACAGCAAGGAGTTCATCGGGTGCGCGCAGGGGTTCGACGACTGGTTCGGCCGCCGGGGCGCCAACCCCAACGTCGTCGTCGGCGCCATCGTCGGCGGCCCGGACCGCCGCGACAGGTTCCGCGACGACCGCGAGAACTACATGCAGACGGAGGCGTGCACGTACAACACGGCGCCCATGGTCGGCATGTTCGCCATGCTCAACCGGCTGTCCCGGCAAGAGTCGCCGTCGACGACAACGACGACGACGGCGACGACGAGTAGCCCGGAAATGGGCCTAAGTGTAAATAGATAGTCACACGAGGGGGTCTGTACAATTTTGCCCCTATTCTTTTGTTCATTCTTTGTAGATGGGAGGGGCTCTCTCCCCTTCGCAGGGAAAAAAAATATTATTTGTATACGAGGGAAAAAAAATTGGGAGGTGGCATTTGGCAAGCAAATGCAAATCCCCTCCCGGTAAATATCAGAGAAATCAATAATTAATTAATTATATAAGTCAAGTAG]
[+] EMBL AK065325 [AGACAGCCCACCACACCACACCACTTCTCCCACCATCGATCCAACACCCCAACTGCTGCTACCACCTCCCCCATCTCCGCCGCCGCCGGCGAGCTCGCCCACGCCCTCGACGCCATCAAGTGGGGCACCGACTACTTCATCAAAGCCCATACCAAGCCCCACGAGCTCTGGGCCGAGGTGGGAGACGGCGACACCGACCACTACTGCTGGCAGCGGCCGGAGGACATGACGACGTCGAGGCAGGCGTACAAGGTGGACCGCCGCCGCCCGGGATCCGACGTCGCCGGCGAGACCGCCGCCGCCATGGCCGCCGCCTCCATCGTCTTCCGCCAATCCAACCCGCACTACTCCCACCTCCTCCTCCACCACGCCCAGCAGCTGTTCGAGTTCGCGGACACGTACAGGGGGAAGTATGACAGTAGCATAGCGGAGGTGAAGAGCTACTACGCGTCGGTGAGCGGGTACCACGACGAGCTCCTGTGGGCGGCGCTGTGGCTGCACCGCGCCACCGGCCGCGCCGCCTACCTCGACTACGCCGTCGACAACGCCGACGAGTTCGGCGGCACCGGCTGGGCCATCACCGAGTTCAGCTGGGACGTCAAGTACGCCGGCGTCCAGATCCTCGCCGCCAGACTGCTGATGAGAGGGGAGCACGAGGAGAGGCACAGGGGGACGCTGGAGAGGTACAGGGAGAAGGCGGAGCACTACGTGTGCGCGTGCATGGGGCGGAACGCGGCCGGCGGCGCGGACGCCAACGTGGAGCGGAGCCCCGGCGGGATGCTGTACGTGCGGCAGTGGAACAACATGCAGTACGTCACCAACGCCGCGTTCCTCCTCTCCGCCTACTCGGACTACCTCGCCGGCGCCGGAGACGGAGACGGGGACGGCGGCGGCGGCGTCGCGACGTGCGTGGGCGGCGGGGGCGCGGGCGCCGGGGAGGTGTTCGCGGCGGCGAGGGAGCAGGTGGACTACGTGCTGGGGAGCAACCCGCGCGGGATGAGCTACCTCGTCGGCTACGGCGAGAGGTTCCCGGCGAGGGTGCACCACCGGGCGGCGTCGATCGTGCCGTACAAGGACAGCAAGGAGTTCATCGGGTGCGCGCAGGGGTTCGACGACTGGTTCGGCCGCCGGGGCGCCAACCCCAACGTCGTCGTCGGCGCCATCGTCGGCGGCCCGGACCGCCGCGACAGGTTCCGCGACGACCGCGAGAACTACATGCAGACGGAGGCGTGCACGTACAACACGGCGCCCATGGTCGGCATGTTCGCCATGCTCAACCGGCTGTCCCGGCAAGAGTCGCCGTCGACGACAACGACGACGACGGCGACGACGAGTAGCCCGGAAATGGGCCTAAGTGTAAATAGATAGTCACACGAGGGGGTCTGTACAATTTTGCCCCTATTCTTTTGTTCATTCTTTGTAGATGGGAGGGGCTCTCTCCCCTTCGCAGGGAAAAAAAATATTATTTGTATACGAGGGAAAAAAAATTGGGAGGTGGCATTTGGCAAGCAAATGCAAATCCCCTCCCGGTAAATATCAGAGAAATCAATAATTAATTAATTATATAAGTCAAGTAG]
consensusID : consensus_11960#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1349 fasta sequence
[CACGCCCTCCACGCCATCAAATGGGGCACCGATTACTTCATCAAGGCGCACACCCACCCCAACGTCCTCTGGACTCAGGTCGGCGACGGCGACTCGGACCACTACTGCTGGCAGCGGCCGGAGGACATGACGACGTCGCGGCACGCGTACAAGGTGGACGCCGAGAACCCCGGGTCGGAGGTCGCCGCAGAGACCGCCGCCGCCATGGCCGCCGCATCCATCGTCTTCCGCCGCGCCGGCGACGCCCACTACGCCCATCTCCTCCTCCACCACGCTCAGCAGTTGTTTGAGTTTGGGGACAAGTACAGGGGGAGATACGACGAGAGTGTGGAGGTGGTAAAGAACTACTACCCATCATCAAGTGGGTACAAGGATGAGCTGCTGTGGGCGGCGCTGTGGCTGCACCGTGCCACCGGCCGCCGCGAATACCTCGACTACGCCGTCGACAACGCCGACGACTTCGGCGGCACCGGCTGGGCCGTCTCCGAGTTCAGCTGGGACATCAAGTACGCCGGACTCCAAGTCCTCGCTTCCAAGCTGCTGGTAGAGGAGAAGCATCTGAGCTCGCAGCAGCGCGAGGTGCTGGAGAAGTACAGGTCAAAGGCGGAGTACTACGTGTGCTCCTGCATGGGCCGCAACCCCGGCGGCGCCGCCCACAACGCCGGCCGCACTCCGGCGGGCCTCCTCTTCATCCGCCCGTGGAACCAACCTCCAGTACGTCTCC-ACGCCGCCTTCCTCCTCACCGTCTAATCCGANGTCCTCTCCTACCTCTCCCTCCCCCTCCTCTGCCCGGACCCCGACGCCGCCGCCGACGAGGCCGNTCCTGCGGGGGCGGACGCCGGCGAGGTGCTGGAGTTCGCGAGGTCGCAGGCGGATTACATACTGGGGACGAACCCGATGGCGACGAGCTACCTCGTCGGGTACGGCGAGGCGTACCCGCGGCGGGTGCACCACCGCGCGGCGTCG-AGCGCGTCGTACGCGCGCGACCGCGACTTCATCGGGTGCCTCCAGGGGTTCGACTCGTGGTACAGCGCGGCGGCGGAGAACCCGCACGACCTCGTCGGCGCCGTCGTCGGCGGGCCCAACGGCAACGACGTGTTCACCGACCACCGCGGCGCGTACATGCAGACGGAGGCCTGCACGTACAACACGGCGCCCATGGTCGGCGTCTTCTCCAGGCTCATGGAGCTCGAG-CGGCGGCGGCGCGGGGAAGACGCGCCGCCGTCGTCGACGTCGCCGGTGGCGGAGGATGATCTGTAGTAGATGTTGTATAAGTTAGGAGATGAGAGAATTTATATGACCCCCTCTGATTGGTGAATGGTGATAATAATAAAAAAAATGAAAAAAGG]
[+] EMBL AK120536 [CACGCCCTCCACGCCATCAAATGGGGCACCGATTACTTCATCAAGGCGCACACCCACCCCAACGTCCTCTGGACTCAGGTCGGCGACGGCGACTCGGACCACTACTGCTGGCAGCGGCCGGAGGACATGACGACGTCGCGGCACGCGTACAAGGTGGACGCCGAGAACCCCGGGTCGGAGGTCGCCGCAGAGACCGCCGCCGCCATGGCCGCCGCATCCATCGTCTTCCGCCGCGCCGGCGACGCCCACTACGCCCATCTCCTCCTCCACCACGCTCAGCAGTTGTTTGAGTTTGGGGACAAGTACAGGGGGAGATACGACGAGAGTGTGGAGGTGGTAAAGAACTACTACCCATCATCAAGTGGGTACAAGGATGAGCTGCTGTGGGCGGCGCTGTGGCTGCACCGTGCCACCGGCCGCCGCGAATACCTCGACTACGCCGTCGACAACGCCGACGACTTCGGCGGCACCGGCTGGGCCGTCTCCGAGTTCAGCTGGGACATCAAGTACGCCGGACTCCAAGTCCTCGCTTCCAAGCTGCTGGTAGAGGAGAAGCATCTGAGCTCGCAGCAGCGCGAGGTGCTGGAGAAGTACAGGTCAAAGGCGGAGTACTACGTGTGCTCCTGCATGGGCCGCAACCCCGGCGGCGCCGCCCACAACGCCGGCCGCACTCCGGCGGGCCTCCTCTTCATCCGCCCGTGGAACCAACCTCCAGTACGTCTCC ACGCCGCCTTCCTCCTCACCGTCTAATCCGANGTCCTCTCCTACCTCTCCCTCCCCCTCCTCTGCCCGGACCCCGACGCCGCCGCCGACGAGGCCGNTCCTGCGGGGGCGGACGCCGGCGAGGTGCTGGAGTTCGCGAGGTCGCAGGCGGATTACATACTGGGGACGAACCCGATGGCGACGAGCTACCTCGTCGGGTACGGCGAGGCGTACCCGCGGCGGGTGCACCACCGCGCGGCGTCG AGCGCGTCGTACGCGCGCGACCGCGACTTCATCGGGTGCCTCCAGGGGTTCGACTCGTGGTACAGCGCGGCGGCGGAGAACCCGCACGACCTCGTCGGCGCCGTCGTCGGCGGGCCCAACGGCAACGACGTGTTCACCGACCACCGCGGCGCGTACATGCAGACGGAGGCCTGCACGTACAACACGGCGCCCATGGTCGGCGTCTTCTCCAGGCTCATGGAGCTCGAG CGGCGGCGGCGCGGGGAAGACGCGCCGCCGTCGTCGACGTCGCCGGTGGCGGAGGATGATCTGTAGTAGATGTTGTATAAGTTAGGAGATGAGAGAATTTATATGACCCCCTCTGATTGGTGAATGGTGATAATAATAAAAAAAATGAAAAAAGG]
[-] EMBL AU077752 [ CTCCAACGCCGCCTTCCTCCTCACCGTCTACTCCGACGTCCTCTCCTACCTCTCCCTCCCCCTCCTCTGCCCGGACCCCGACGCCGCCGCCGACGAGGCCGCTCCTGCGGCGGCGGACNCCNGCGAGGTGCTGGAGTTCGCGAGGTCGCAGGCGGATTACATACTGGGGACGAACCCGATGGCGACGAGCTACCTCGTCGGGTACGGCGAGGCGTACCCGCGGCGGGTGCACCACCGCGCGGCGTCGAAGCGCGTCGTACGCGCGCGACCGCGACTTCATCGGGTGCCTCCAGGGGTTCGACTCGTGGTACAGCGCGGCGGCGGAGAACCCGCACGACCTCGTCGGCGCCGTCGTCGGCGGGCCCAACGGCAACGACGTGTTCACCGACCACCGCGGCGCGTACATGCAGACGGAGGCCTGCACGTACAACACGGCGCCCATGGTCGGCGTCTTCTCCAGGCTCATGGAGCTCGAGTCGGCGGCGGCGCGGGGAAGACGCGCCGCCGTCGTCGACGTCGCCGGTGGCGG ]
[+] EMBL CB238416 [ GTACAGCGCGGCGGCGGAGAACCCGCACGACCTCGTCGGCGCCGTCGTCGGCGGGCCCAACGGCAACGACGTGTTCACCGACCACCGCGGCGCGTACATGCAGACGGAGGCCTGCACGTACAACACGGCGCCCATGGTCGGCGTCTTCTCCAGGC ]
consensusID : consensus_11960#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 571 fasta sequence
[TTTTTTTTTTTTTTTTTTTTTTTTTTCAGGCAGTAATAATTATTAACAATAATTTTGTGATAATGCATGGATGGATATTGGAGAGCAGCTGCTGGTAGAGGAGAAGCATCTGAGCTCGCAGCAGCGCGAGGTGCTGGAGAAGTACAGGTCAAAGGCGGAGTACTACGTGTGCTCCTGCATGGGCCGCAACCCCGGCGGCGCCGCCCACAACGCCGGCCGCACTCCGGCGGGCCTCCTCTTCATCCGCCCGTGGAACAACCTCCAGTACGTCTCCAACGCCGCCTTCCTCCTCACCGTCTACTCCGACGTCCTCTCCTACCTCTCCCTCCCCCTCCTCTGCCCGGACCCCGANGCCGCCGCCGACGAGGCCGCTCCTGCGGCGGCGGACGCCGGCG-AGGTGCTGGAGTTCGCGAGGTCGCAGGCGGATTACATACTGGGGANGAACCCGA-TGGCGACGAGCTACCTCGTCGGGTACGGCNAGGCGTACCCGCGGCGGGTGCACCACCGCGCGGNGTCGAAGCGCGTCGTACGCGGCGAACCGGGACTTCATCGGGTGCCTCCAGGGGTTCGA]
[-] EMBL AU077753 [TTTTTTTTTTTTTTTTTTTTTTTTTTCAGGCAGTAATAATTATTAACAATAATTTTGTGATAATGCATGGATGGATATTGGAGAGCAGCTGCTGGTAGAGGAGAAGCATCTGAGCTCGCAGCAGCGCGAGGTGCTGGAGAAGTACAGGTCAAAGGCGGAGTACTACGTGTGCTCCTGCATGGGCCGCAACCCCGGCGGCGCCGCCCACAACGCCGGCCGCACTCCGGCGGGCCTCCTCTTCATCCGCCCGTGGAACAACCTCCAGTACGTCTCCAACGCCGCCTTCCTCCTCACCGTCTACTCCGACGTCCTCTCCTACCTCTCCCTCCCCCTCCTCTGCCCGGACCCCGANGCCGCCGCCGACGAGGCCGCTCCTGCGGCGGCGGACGCCGGCG AGGTGCTGGAGTTCGCGAGGTCGCAGGCGGATTACATACTGGGGANGAACCCGA TGGCGACGAGCTACCTCGTCGGGTACGGCNAGGCGTACCCGCGGCGGGTGCACCACCGCGCGGNGTCGAAGCGCGTCGTACGCGGCGAACCGGGACTTCATCGGGTGCCTCCAGGGGTTCGA]
[+] EMBL OSS14416A [ ATATTGGAGAGCAGCTGCTGGTAGAGGAGAAGCATCTGAGCTCGCAGCAGCGCGAGGTGCTGGAGAAGTACAGGTCAAAGGCGGAGTACTACGTGTGCTCCTGCATGGGCCGCAACCCCGGCGGCGCCGCCCACAACGCCGGCCGCACTCCGGCGGGCCTCCTCTTCATCCGCCCGTGGAACAACCTCCAGTACGTCTCCAACGNCGCCTTCCTCCTCACCGTCTACTCCGACGTCCTCTCCTACCTCTCCCTCCCCCTCCTCTGCCCGGACCCCGACGACGNCGNCGACGAGGCCGNTCCTGC GCGGCGGACG CGGCGAAGGTGCTGGAGTTCGCGAGGTCGNAGGCGGATTACATACTGGGGACGAA CCGATTGGCGACGAGTTAACTCGTCGGGTAAGGCGAGGCGTAACCGCGGCGGGTTGAACAACG GGGGCGTCG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11960#0 TCACGCAGCGCGGGAGATCGCGCAAAGAACCGAGAAGAGCTCATCTCATCCACCATCACT 60
consensus_11960#2 ------------------------------------------------------------
consensus_11960#1 ------------------------------------------------------------
consensus_11960#3 ------------------------------------------------------------
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 CGCGCAGAGAGATCGATAGCCACAGCGCACAAGCAACGCGCCGCCAATCACATGCGCGCG 120
consensus_11960#2 ------------------------------------------------------------
consensus_11960#1 ------------------------------------------------------------
consensus_11960#3 ------------------------------------------------------------
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 GCGGTGCAGGGGCGGGCACATGCGTGGACGACGACGACGACGACACCGCCGGGCGCGATG 180
consensus_11960#2 ------------------------------------------------------------
consensus_11960#1 ------------------------------------------------------------
consensus_11960#3 ------------------------------------------------------------
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 AGAGGCCGGGCGCTGGTCCTCGTGGCCGCGCTGCTGCTGCAGCTGCTTCTCCTCGCCGCT 240
consensus_11960#2 ------------------------------------------------------------
consensus_11960#1 ------------------------------------------------------------
consensus_11960#3 ------------------------------------------------------------
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 GCCGGTGGCGCGGGCGCGGCGGCGACGGAGAGGAAGGCGCACAACTACGAGGACGCGCTG 300
consensus_11960#2 ------------------------------------------------------------
consensus_11960#1 ------------------------------------------------------------
consensus_11960#3 ------------------------------------------------------------
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 CGGAAGAGCCTGCTCTACTTCGAGGCGCAGCGGTCGGGGCGGCTCCCGCACAACCAGCGC 360
consensus_11960#2 ------------------------------------------------------------
consensus_11960#1 ------------------------------------------------------------
consensus_11960#3 ------------------------------------------------------------
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 GTCGCGTGGCGCGACCACTCCGGCCTCACCGACGGCCTCGAGCAAGGGGTGGATTTGGTG 420
consensus_11960#2 ------------------------------------------------------------
consensus_11960#1 ------------------------------------------------------------
consensus_11960#3 ------------------------------------------------------------
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 GGAGGCTACTACGACGCCGGCGACCATGTCAAATTCGGGCTGCCCATGGCGTTCACGGTG 480
consensus_11960#2 -------------AGACAGCCCACCACACCACACCACTTCTCCCACCATCGATC-CAACA 46
consensus_11960#1 ----------------------------------------------------TCACCGTC 8
consensus_11960#3 ------------------------------------------------------------
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 ACGATGCTGTCGTGGAGCATGATCGAGTACGGCGACGACGTCGAGGCCGCCGGCGAGCTC 540
consensus_11960#2 CCCCAACTGCTGCT-------ACCACCTCCCCCATCTCCGCCG---CCGCCGGCGAGCTC 96
consensus_11960#1 ACCATGCTCTCCTGGGGCGCCATCGACTTCGCCGCCGACATCGCCGCCGCCGGCGAGTGG 68
consensus_11960#3 ------------------------------------------------------------
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 GGCCACGCGCTCGAGGTCATCAAGTGGGGCACTGACTACTTCATCAAGGCGCACACCAAG 600
consensus_11960#2 GCCCACGCCCTCGACGCCATCAAGTGGGGCACCGACTACTTCATCAAAGCCCATACCAAG 156
consensus_11960#1 CGCCACGCCCTCGAGGCCATCAAGTGGGGCACCGACTACTTCGTCAAGGCCCACACCCAC 128
consensus_11960#3 ---CACGCCCTCCACGCCATCAAATGGGGCACCGATTACTTCATCAAGGCGCACACCCAC 57
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 CCCAACGAGCTCTGGGCTGAGGTCGGGGACGGCGACACGGATCACTACTGCTGGCAGCGG 660
consensus_11960#2 CCCCACGAGCTCTGGGCCGAGGTGGGAGACGGCGACACCGACCACTACTGCTGGCAGCGG 216
consensus_11960#1 CCCTTCGTCTACTGGGCCGAGGTGGGCGACGGCGACACGGACCACTACTGCTGGCAGCGG 188
consensus_11960#3 CCCAACGTCCTCTGGACTCAGGTCGGCGACGGCGACTCGGACCACTACTGCTGGCAGCGG 117
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 CCGGAGGACATGACGACGTCGAGGCAGGCGTACAAGGTGGACCGGGAGCGGCCGGGCTCC 720
consensus_11960#2 CCGGAGGACATGACGACGTCGAGGCAGGCGTACAAGGTGGACCGCCGCCGCCCGGGATCC 276
consensus_11960#1 CCGGAGGACATGACGACGTCGAGGCAGGCCTACCGCGTGGACAGGGACAACCCGGGGTCG 248
consensus_11960#3 CCGGAGGACATGACGACGTCGCGGCACGCGTACAAGGTGGACGCCGAGAACCCCGGGTCG 177
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 GACGTCGCCGGCGAGACGGCGGCGGCGATGGCCGCCGCGTCCATCGTCTTCCGCAAGTCC 780
consensus_11960#2 GACGTCGCCGGCGAGACCGCCGCCGCCATGGCCGCCGCCTCCATCGTCTTCCGCCAATCC 336
consensus_11960#1 GACCTCGCCGGCGAGACGGCGGCGGCGCTCGCGGCGGCGTCCATCGTGTTCCGCCGCTCC 308
consensus_11960#3 GAGGTCGCCGCAGAGACCGCCGCCGCCATGGCCGCCGCATCCATCGTCTTCCGCCGCGCC 237
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 A---ACCCGCACTACGCGAGCCTCCTCCTGCACCACGCCCAGCAGCTGTTCGAGTTTGCC 837
consensus_11960#2 A---ACCCGCACTACTCCCACCTCCTCCTCCACCACGCCCAGCAGCTGTTCGAGTTCGCG 393
consensus_11960#1 G---ACCCGCACTACTCCCACCTCCTCCTCCACCACGCCCAGCAGCTGTTCGAGTTCGGG 365
consensus_11960#3 GGCGACGCCCACTACGCCCATCTCCTCCTCCACCACGCTCAGCAGTTGTTTGAGTTTGGG 297
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 GACAAGTACAGAGGGAAGTATGACAGCAGTATCGCCGAGGTGAAGAGCTACTACGCGTCG 897
consensus_11960#2 GACACGTACAGGGGGAAGTATGACAGTAGCATAGCGGAGGTGAAGAGCTACTACGCGTCG 453
consensus_11960#1 GACACCTACAGGGGCAGCTACGACAGCAGCATCGAGGAGGTCCGGAGCTACTACGCGTCG 425
consensus_11960#3 GACAAGTACAGGGGGAGATACGACGAGAGTGTGGAGGTGGTAAAGAACTACTACCCATCA 357
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 GTGAGCGGGTACAAGGACGAGCTCCTTTGGGCCGCATTGTGGCTGCACCGGGCCACCGGC 957
consensus_11960#2 GTGAGCGGGTACCACGACGAGCTCCTGTGGGCGGCGCTGTGGCTGCACCGCGCCACCGGC 513
consensus_11960#1 GTCAGCGGCTACCACGACGAGCTCCTGTGGGCGGCGCTCTGGCTCCACCGCGCCACGGGC 485
consensus_11960#3 TCAAGTGGGTACAAGGATGAGCTGCTGTGGGCGGCGCTGTGGCTGCACCGTGCCACCGGC 417
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 AAGGCCCATTACCTCGACTACGTCGTGGACAACGCCGACTGCTTCGGTGGCACCGGCTGG 1017
consensus_11960#2 CGCGCCGCCTACCTCGACTACGCCGTCGACAACGCCGACGAGTTCGGCGGCACCGGCTGG 573
consensus_11960#1 AAGGAGGAGTACCTCCGCTACGCCGTCGACAACGCCGACTCCTTCGGCGGCGTCGGCTGG 545
consensus_11960#3 CGCCGCGAATACCTCGACTACGCCGTCGACAACGCCGACGACTTCGGCGGCACCGGCTGG 477
consensus_11960#4 -------------------------------TTTTTTTTTTTTTTTTTTTTTTTTTTCAG 29
** *
consensus_11960#0 GCCATCACCGAGTTCAGCTGGGACGTCAAGTACGCCGGCGTCCAGATCCTCGCCGCAAGA 1077
consensus_11960#2 GCCATCACCGAGTTCAGCTGGGACGTCAAGTACGCCGGCGTCCAGATCCTCGCCGCCAGA 633
consensus_11960#1 GCCATCACCGAGTTCAGCTGGGACGTCAAGTACGCCGGCCTCCAGGTCCTCGCCGCCAAG 605
consensus_11960#3 GCCGTCTCCGAGTTCAGCTGGGACATCAAGTACGCCGGACTCCAAGTCCTCGCTTCCAAG 537
consensus_11960#4 GCAGTAATAATTATTAACAATAATTTTGTG-ATAATGCATGGATGGATATTGGAGAGCAG 88
** * * * * * * * * * * *
consensus_11960#0 CTGCTGCTGAGAGGAGA---GCACGAGGAGCGGCACAGGAGCACGCTGGAGCAGTACAGG 1134
consensus_11960#2 CTGCTGATGAGAGGGGA---GCACGAGGAGAGGCACAGGGGGACGCTGGAGAGGTACAGG 690
consensus_11960#1 CTGCTGCTGGACGGCGACCCGCAGGCGGCGGCGCACCGCGGCGTGCTGGAGAAGTACAGG 665
consensus_11960#3 CTGCTGGTAGAGGAGAAGCATCTGAGCTCGCAGCAGCGCGAGGTGCTGGAGAAGTACAGG 597
consensus_11960#4 CTGCTGGTAGAGGAGAAGCATCTGAGCTCGCAGCAGCGCGAGGTGCTGGAGAAGTACAGG 148
****** * * * * * *** * ******* *******
consensus_11960#0 GCGAAGGCGGAGCACTACGTGTGCGGGTGCCTGGGGCGGAACGCGGACGGCGGCGCGGAC 1194
consensus_11960#2 GAGAAGGCGGAGCACTACGTGTGCGCGTGCATGGGGCGGAACGCGGCCGGCGGCGCGGAC 750
consensus_11960#1 GAGAAGGCGGAGCACTACCTGTGCGCGTGCCTCGGCCGCAACAT---CAACGGCGCCGAC 722
consensus_11960#3 TCAAAGGCGGAGTACTACGTGTGCTCCTGCATGGGCCGCAACCC---CGGCGGCGCCGCC 654
consensus_11960#4 TCAAAGGCGGAGTACTACGTGTGCTCCTGCATGGGCCGCAACCC---CGGCGGCGCCGCC 205
********* ***** ***** *** * ** ** *** * ****** * *
consensus_11960#0 GCGAACGTGGAGCGGAGCCCGGGCGGGATGCTGTACGTGAGGCAGTGGAAC-AACATGCA 1253
consensus_11960#2 GCCAACGTGGAGCGGAGCCCCGGCGGGATGCTGTACGTGCGGCAGTGGAAC-AACATGCA 809
consensus_11960#1 ---AACGTCGACCGGAGCCCCGGCGGGATGCTCTACGTCCGCCAATGGAAC-AACCTCCA 778
consensus_11960#3 CACAACGCCGGCCGCACTCCGGCGGGCCTCCTCTTCATCCGCCCGTGGAACCAACCTCCA 714
consensus_11960#4 CACAACGCCGGCCGCACTCCGGCGGGCCTCCTCTTCATCCGCCCGTGGAAC-AACCTCCA 264
**** * ** * ** * ** * ** * * * * * ****** *** * **
consensus_11960#0 GTACGTGACCAACGCGGCGTTCCTCCTCGCGGCGTACGCGGACTACCTGGGCG------- 1306
consensus_11960#2 GTACGTCACCAACGCCGCGTTCCTCCTCTCCGCCTACTCGGACTACCTCGCCGGCGCCGG 869
consensus_11960#1 GTACGCCTCCAGCGCCGCCTTCCTCCTCACCGCCTACTCCCACTACCTCTCCTCCTCCT- 837
consensus_11960#3 GTACGTCTCCA-CGCCGCCTTCCTCCTCACCGTCTAATCCGANGTCCTCTCCTACCTCTC 773
consensus_11960#4 GTACGTCTCCAACGCCGCCTTCCTCCTCACCGTCTACTCCGACGTCCTCTCCTACCTCTC 324
***** *** *** ** ********* * * ** * * *** *
consensus_11960#0 --------------ACGACGCGGGCGGCGCCGTGTCGTGCGCGGGCGGC---GAGACGGC 1349
consensus_11960#2 AGACGGAGACGGGGACGGCGGCGGCGGCGTCGCGACGTGCGTGGGCGGC---GGGGGCGC 926
consensus_11960#1 --------------CCGCCTCCGCCTCCGCGGCCCTCCGCTGCCCCGGT---GGCGCGGC 880
consensus_11960#3 CCTCCCCCTCCTCTGCCCGGACCCCGACGCCGCCGCCGACGAGGCCGNTCCTGCGGGGGC 833
consensus_11960#4 CCTCCCCCTCCTCTGCCCGGACCCCGANGCCGCCGCCGACGAGGCCGCTCCTGCGGCGGC 384
* * * * * ** * **
consensus_11960#0 GGGCGCGGGCGAGGTGGCGGCGCTCGCGAGGGCGCAGGTGGACTACGTGCTGGGCACCAA 1409
consensus_11960#2 GGGCGCCGGGGAGGTGTTCGCGGCGGCGAGGGAGCAGGTGGACTACGTGCTGGGGAGCAA 986
consensus_11960#1 GGCGGCGGCGGAGATGGTGTCGCTGGCGAGGTCGCAGGCGGACTACATCCTGGGGCGGAA 940
consensus_11960#3 GGACGCCGGCGAGGTGCTGGAGTTCGCGAGGTCGCAGGCGGATTACATACTGGGGACGAA 893
consensus_11960#4 GGACGCCGGCGAGGTGCTGGAGTTCGCGAGGTCGCAGGCGGATTACATACTGGGGANGAA 444
** ** * *** ** * ****** ***** *** *** * ***** **
consensus_11960#0 CCCGAGGGGGATCAGCTACCTGGTCGGGTACGGCGCCAAGTACCCGAACAGGGTGCACCA 1469
consensus_11960#2 CCCGCGCGGGATGAGCTACCTCGTCGGCTACGGCGAGAGGTTCCCGGCGAGGGTGCACCA 1046
consensus_11960#1 CCCGCTGCGGCTGAGCTACATGGTGGGGTACGGCCGCCGGTACCCCGCCCGGGTGCACCA 1000
consensus_11960#3 CCCGATGGCGACGAGCTACCTCGTCGGGTACGGCGAGGCGTACCCGCGGCGGGTGCACCA 953
consensus_11960#4 CCCGATGGCGACGAGCTACCTCGTCGGGTACGGCNAGGCGTACCCGCGGCGGGTGCACCA 504
**** * ****** * ** ** ****** ** *** **********
consensus_11960#0 CCGCGCCGCGTCCA-TCGTGCCGTACAAGCACAGCAAGGAGTTCATCGGGTGCACGCAGG 1528
consensus_11960#2 CCGGGCGGCGTCGA-TCGTGCCGTACAAGGACAGCAAGGAGTTCATCGGGTGCGCGCAGG 1105
consensus_11960#1 CCGCGGCGCCTCCA-TCGTGTCCCACAAGGAGGACGGCCGCTTCATCGGGTGCGTGCAGG 1059
consensus_11960#3 CCGCGCGGCGTCGA-GCGCGTCGTACGCGCGCGACCGCGACTTCATCGGGTGCCTCCAGG 1012
consensus_11960#4 CCGCGCGGNGTCGAAGCGCGTCGTACGCGGCGAACCGGGACTTCATCGGGTGCCTCCAGG 564
*** * * ** * ** * * ** * * ************ ****
consensus_11960#0 GGTTCGACCACTGGTTCGGTCGCCGGAGCTCCAACCCGAACGTCCTCGTCGGCGCCATCG 1588
consensus_11960#2 GGTTCGACGACTGGTTCGGCCGCCGGGGCGCCAACCCCAACGTCGTCGTCGGCGCCATCG 1165
consensus_11960#1 GGTTCGACGACTGGTTCGGCCGCGGCCGCGCCAACCCCAACGTGCTCGCCGGCGCCATCG 1119
consensus_11960#3 GGTTCGACTCGTGGTACAGCGCGGCGGCGGAGAACCCGCACGACCTCGTCGGCGCCGTCG 1072
consensus_11960#4 GGTTCGA----------------------------------------------------- 571
*******
consensus_11960#0 TCGGTGGGCCGGACCGGCGGGACAGGTTCAGGGACAACCGGGAGAACTACATGCAGACGG 1648
consensus_11960#2 TCGGCGGCCCGGACCGCCGCGACAGGTTCCGCGACGACCGCGAGAACTACATGCAGACGG 1225
consensus_11960#1 TCGGCGGGCCCAGCCGCCGCGACGAGTTCCGCGACGACCGCGCCAACTACATGCAGACCG 1179
consensus_11960#3 TCGGCGGGCCCAACGGCAACGACGTGTTCACCGACCACCGCGGCGCGTACATGCAGACGG 1132
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 AGGCGTGCACGTACAACACGGCGCCCATGGTCGGCATGTTCGCCAAGCTGAACAGGATGG 1708
consensus_11960#2 AGGCGTGCACGTACAACACGGCGCCCATGGTCGGCATGTTCGCCATGCTCAACCGGCTGT 1285
consensus_11960#1 AGGCCTGCACCTACAACACCGCCCCCATGGTCGCCGTCTTCGCCAGGCTACACCGCCTCA 1239
consensus_11960#3 AGGCCTGCACGTACAACACGGCGCCCATGGTCGGCGTCTTCTCCAGGCTCATGGAGCTCG 1192
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 CCCGGCAGGAGAGG-----GAGCAGGAGGA-GGTGGCGGCTCCGGCGAGGAGTACGGC-- 1760
consensus_11960#2 CCCGGCAAGAGTCGCCGTCGACGACAACGACGACGACGGCGACGACGAGTAGCCCGGAAA 1345
consensus_11960#1 CC--ACCGCCATCACC----ACGGCGGCCGCGGCGGAGGATCCCGACGGCGGCTCGCCGG 1293
consensus_11960#3 AGCGGCGGCGGCGCGGGGAAGACGCGCCGCCGTCGTCGACGTCGCCGGTGGCGGAGGA-- 1250
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 --GGCCGATGTGTAAATAGATTAGGTTATAGAGGGGG-GGCTGTACAATTTT--CCCCAT 1815
consensus_11960#2 TGGGCCTAAGTGTAAATAGAT--AGTCACACGAGGGG-GTCTGTACAATTTTGCCCCTAT 1402
consensus_11960#1 ATCGGAGGAGTGTAGATAGAA--GGTAGTGGTGGTGGTGGTGGTTTTAATTTGGGCGGGA 1351
consensus_11960#3 TGATCTGTAGTAGATGTTGTATAAGTTAGGAGATGAGAGAATTTATATGACCCCCTCTGA 1310
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 TCTTTTGTTCATTTTTCTTCTCCTTCTTTGGAGATCTTCTTTTCACACAGATTGGAAAAA 1875
consensus_11960#2 TCTTTTGTTCATTCT--TTGTAGATGGGAGGGGCTCTCTCCCCTTCGCAGGGAAAAAAAA 1460
consensus_11960#1 AAAATTCTTTTTTCTTTTCTCGTATACTTTGCCTTCTTTTCTGCTTAAAAACTTCACTAA 1411
consensus_11960#3 TTGGTGAATGGTGATAATAATAAAAAAAATGAAAAAAGG--------------------- 1349
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 TTCATTTTGTA-------TACAAAAAGAGAAAGGGACGGGTGGAGGCATTCG-CATGCAA 1927
consensus_11960#2 TATTATTTGTA-------TACGAGG-GAAAAAAAATTGGGAGGTGGCATTTGGCAAGCAA 1512
consensus_11960#1 ATTTTTTTGAAGTGTTAATATGAGAGAGAGAGAGGTAAAGAGAGGGGATTTGAT-TATTA 1470
consensus_11960#3 ------------------------------------------------------------
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 ATGTAAATTCGCCACCGGTACATACGAAGAAAAAGAAT--TTTATCAAAAAAAAA----- 1980
consensus_11960#2 ATGCAAATCCCCTCCCGGTAAATATCAGAGAAATCAATAATTAATTAATTATATAAGTCA 1572
consensus_11960#1 TTATTA--TTATTAGTGAAAAAGAAACAAGAAAAAGATAGTGGATGGGTGTTATAATTAA 1528
consensus_11960#3 ------------------------------------------------------------
consensus_11960#4 ------------------------------------------------------------
consensus_11960#0 ----------------------------------------------------------
consensus_11960#2 AGTAG----------------------------------------------------- 1577
consensus_11960#1 GGAGGAGATGAAGGTGAAAATTAGTTACTTGTATTTTTGAGGTTAGGTCTAAGAAGTC 1586
consensus_11960#3 ----------------------------------------------------------
consensus_11960#4 ----------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||