cluster # 11977

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Oryza sativa
cluster # 11977 cluster # 11977 Sequences # 9 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11977#0 length = 2115 sequences # 8

consensus_11977#1 length = 803 sequences # 1

consensusID : consensus_11977#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2115
fasta sequence

                              [TTTCTCCCACCTCGCCGCGCACCCCTCCCCTCCCCATGTCCTCGCCTTCCTCCCCGCGCTCTTGCTCCCGCAGCTTCACGCTTCCCCCGCACTAGTACAGACTCCTGATGGTGGTGGAGGTAAACCTCGGCGGCTAACCCATCGTCCACCGCGCGCGGCGGCTCTGTTTTTGGTTTGGGCGGCATTTTGGTCTCCTTGGGGGTGTGGATTTGGGTTGGGGGGGAGGAGAGCTGGGTGAAGATTTGTGGCGGAAACTGTTGGGGGGGAATTGATGGTGGGATTCATGGAGTGCGTGCACGATTGGTTGCTGTGGGACGCCGTCCTGGAATGCGGAGGGATCCGGAGGCCACCGATTAGATAGCGGCCGGGGGAGGAGGGAGAGGAGAGGAGAGAGGAGCAGGCGGTGGCAGAGGCGGAGGCCGTCGCCATTAGCACCAGTCACCCCGAGGCGCGAGTCACCAAGCCATGGGGGAAGACCTCGTCACCACCCTGTCCATGGAGAACGGCGGCGGTGGCGGTGGCGGTGGCCACCACAGCCTCTGCACCCTTCTCTCCATGGATCCCGCCGGCCACCTCGACGACCGCGCCGTCGGGGTCATGGTGCAGCCCCGCATCGGGGACGGCGCCGGGCGCGCCCACGCCGTGTCGCTCTCCGGCGCGCATCCGCCGGACATCAACCAGCCGTGGCAGACTGACCTCTGCGACATGCTCGACGTCAGCCTCGGCCCGCAGATTCAGGTGTACGACGCCGAGGCGCTCGCCGTGCTGAGCAGTGCCCCGAAGGCTGGGAACCGCAAGGCCGCCAAGCGCGGGGACAGCATCTGGGGCGCCTGGTTCTTCTTCACGTTCTACTTCAAGCCCCTGCTCGCGGACAAGTGCAAAGGCAAGGTCACCCGGGATGCCAACGGTGTGTCAGGGTTTGACAAGACGGATCTCCGGCTCGACATGTTCATGGTGCAGCACGACATGGAGAACATGTACATGTGGGTCTTCAAGGAGCGGCCGGAGAATGCCCTTGGCAAGATGCAGCTGAGGAGCTACATGAACGGGCACTCCCGCCCTGGTGAGCCGCAATTCCCGTTCAGCGTTGACAGGGGATTTGTGCGATCACACCGGATGCAGCGCAAGCACTACCGTGGACTCTCAAACCCACAGTGTATTCATGGAATTGAGGTGGTGAGATCACCAAATCTTGCAAGCATAACTGAGGTAGACAGGAGGAGGTGGGTGGAGCTTACAGGGAGGGAGCTCAATTTCGCAATCCCGCAGGAGGCCTGTGATTTTGGGACATGGAGGACTATGCCAAACACAGAGATTGAGCTTGACAGGCCACATCCTGTCATGAAGGGCAACGTTCATCAACACCCAAAGAAGCTGCTTAATGGATCTGGCTTGAATTTGTCATCACCCTCCAATCACTCAGGAGAAGATGGCATGGATCTCTCCCCAGTTAGCAGCAAGCGCAGGAAGGAGGTGTTTCCGCATGCCATGGATGAGGAATGCTTCTTGCCACTCAACTCTTGCGGCGAGAGGACACAACAAGATGTGGAGATGCATTCAGTAGTGCAGCCTTCATGGCAGCACGAATTTTCTGGGGTGATGAAAAAGGCTCGCGGGCCTGTGACTGCCGCCAAGTCGATTTATGAAGATGACCAAGGCTACTTGATAATGGTCAGCTTACCATTTGTTGATCAGCAGAAGGTGAAAGTTTCATGGAGGAACAGTCTTACTCATGGTATAGTAAAGATCCTTTGTGTTAGTACAGCCCAGACGCCATACATCAGAAGGCATGACAGGGTATTCAAGCTTGCTGATCCTATGCCTGAGCACTGCCCTCATGGGGAATTTGTCCGTGAAATACCTCTAGCAACTCGCATCCCTGAAGACGCTAAGCTAGAAGCATACTTTGATGAGGCCGCTGCAGTGCTTGAGATCATGGTTCCCAAACGTGGAAATGAGCCAGAAGAACATGAAGTAAGAGTCTCTATGCGCCCCCCTCACCTTGCAGCTAACGATCTACTCCTGACATAACCAGTGGAAGGTCTATCAACCATATAGTCTTGTTTCTGACCACCAGATCAATGCCCAAACATGGCTGAGAAGGTATGAGCATGA]

[+] EMBL AK069954             [TTTCTCCCACCTCGCCGCGCACCCCTCCCCTCCCCATGTCCTCGCCTTCCTCCCCGCGCTCTTGCTCCCGCAGCTTCACGCTTCCCCCGCACTAGTACAGACTCCTGATGGTGGTGGAGGTAAACCTCGGCGGCTAACCCATCGTCCACCGCGCGCGGCGGCTCTGTTTTTGGTTTGGGCGGCATTTTGGTCTCCTTGGGGGTGTGGATTTGGGTTGGGGGGGAGGAGAGCTGGGTGAAGATTTGTGGCGGAAACTGTTGGGGGGGAATTGATGGTGGGATTCATGGAGTGCGTGCACGATTGGTTGCTGTGGGACGCCGTCCTGGAATGCGGAGGGATCCGGAGGCCACCGATTAGATAGCGGCCGGGGGAGGAGGGAGAGGAGAGGAGAGAGGAGCAGGCGGTGGCAGAGGCGGAGGCCGTCGCCATTAGCACCAGTCACCCCGAGGCGCGAGTCACCAAGCCATGGGGGAAGACCTCGTCACCACCCTGTCCATGGAGAACGGCGGCGGTGGCGGTGGCGGTGGCCACCACAGCCTCTGCACCCTTCTCTCCATGGATCCCGCCGGCCACCTCGACGACCGCGCCGTCGGGGTCATGGTGCAGCCCCGCATCGGGGACGGCGCCGGGCGCGCCCACGCCGTGTCGCTCTCCGGCGCGCATCCGCCGGACATCAACCAGCCGTGGCAGACTGACCTCTGCGACATGCTCGACGTCAGCCTCGGCCCGCAGATTCAGGTGTACGACGCCGAGGCGCTCGCCGTGCTGAGCAGTGCCCCGAAGGCTGGGAACCGCAAGGCCGCCAAGCGCGGGGACAGCATCTGGGGCGCCTGGTTCTTCTTCACGTTCTACTTCAAGCCCCTGCTCGCGGACAAGTGCAAAGGCAAGGTCACCCGGGATGCCAACGGTGTGTCAGGGTTTGACAAGACGGATCTCCGGCTCGACATGTTCATGGTGCAGCACGACATGGAGAACATGTACATGTGGGTCTTCAAGGAGCGGCCGGAGAATGCCCTTGGCAAGATGCAGCTGAGGAGCTACATGAACGGGCACTCCCGCCCTGGTGAGCCGCAATTCCCGTTCAGCGTTGACAGGGGATTTGTGCGATCACACCGGATGCAGCGCAAGCACTACCGTGGACTCTCAAACCCACAGTGTATTCATGGAATTGAGGTGGTGAGATCACCAAATCTTGCAAGCATAACTGAGGTAGACAGGAGGAGGTGGGTGGAGCTTACAGGGAGGGAGCTCAATTTCGCAATCCCGCAGGAGGCCTGTGATTTTGGGACATGGAGGACTATGCCAAACACAGAGATTGAGCTTGACAGGCCACATCCTGTCATGAAGGGCAACGTTCATCAACACCCAAAGAAGCTGCTTAATGGATCTGGCTTGAATTTGTCATCACCCTCCAATCACTCAGGAGAAGATGGCATGGATCTCTCCCCAGTTAGCAGCAAGCGCAGGAAGGAGGTGTTTCCGCATGCCATGGATGAGGAATGCTTCTTGCCACTCAACTCTTGCGGCGAGAGGACACAACAAGATGTGGAGATGCATTCAGTAGTGCAGCCTTCATGGCAGCACGAATTTTCTGGGGTGATGAAAAAGGCTCGCGGGCCTGTGACTGCCGCCAAGTCGATTTATGAAGATGACCAAGGCTACTTGATAATGGTCAGCTTACCATTTGTTGATCAGCAGAAGGTGAAAGTTTCATGGAGGAACAGTCTTACTCATGGTATAGTAAAGATCCTTTGTGTTAGTACAGCCCAGACGCCATACATCAGAAGGCATGACAGGGTATTCAAGCTTGCTGATCCTATGCCTGAGCACTGCCCTCATGGGGAATTTGTCCGTGAAATACCTCTAGCAACTCGCATCCCTGAAGACGCTAAGCTAGAAGCATACTTTGATGAGGCCGCTGCAGTGCTTGAGATCATGGTTCCCAAACGTGGAAATGAGCCAGAAGAACATGAAGTAAGAGTCTCTATGCGCCCCCCTCACCTTGCAGCTAACGATCTACTCCTGACATAACCAGTGGAAGGTCTATCAACCATATAGTCTTGTTTCTGACCACCAGATCAATGCCCAAACATGGCTGAGAAGGTATGAGCATGA]
[+] EMBL AK103961             [  TCTCCCACCTCGCCGCGCACCCCTCCCCTCCCCATGTCCTCGCCTTCCTCCCCGCGCTCTTGCTCCCGCAGCTTCACGCTTCCCCCGCACTAGTACAGACTCCTGATGGTGGTGGAGGTAAACCTCGGCGGCTAACCCATCGTCCACCGCGCGCGGCGGCTCTGTTTTTGGTTTGGGCGGCATTTTGGTCTCCTTGGGGGTGTGGATTTGGGTTGGGGGGGAGGAGAGCTGGGTGAAGATTTGTGGCGGAAACTGTTGGGGGGGAATTGATGGTGGGATTCATGGAGTGCGTGCACGATTGGTTGCTGTGGGACGCCGTCCTGGAATGCGGAGGGATCCGGAGGCCACCGATTAGATAGCGGCCGGGGGAGGAGGGAGAGGAGAGGAGAGAGGAGCAGGCGGTGGCAGAGGCGGAGGCCGTCGCCATTAGCACCAGTCACCCCGAGGCGCGAGTCACCAAGCCATGGGGGAAGACCTCGTCACCACCCTGTCCATGGAGAACGGCGGCGGTGGCGGTGGCGGTGGCCACCACAGCCTCTGCACCCTTCTCTCCATGGATCCCGCCGGCCACCTCGACGACCGCGCCGCCGGGGTCATGGTGCAGCCCCGCATCGGGGACGGCGCCGGGCGCGCCCACGCCGTGTCGCTCTCCGGCGCGCATCCGCCGGACATCAACCAGCCGTGGCAGACTGACCTCTGCGACATGCTCGACGTCAGCCTCGGCCCGCAGATTCAGGTGTACGACGCCGAGGCGCTCGCCGTGCTGAGCAGTGCCCCGAAGGCTGGGAACCGCAAGGCCGCCAAGCGCGGGGACAGCATCTGGGGCGCCTGGTTCTTCTTCACGTTCTACTTCAAGCCCCTGCTCGCGGACAAGTGCAAAGGCAAGGTCACCCGGGATGCCAACGGTGTGTCAGGGTTTGACAAGACGGATCTCCGGCTCGACATGTTCATGGTGCAGCACGACATGGAGAACATGTACATGTGGGTCTTCAAGGAGCGGCCGGAGAATGCCCTTGGCAAGATGCAGCTGAGGAGCTACATGAACGGGCACTCCCGCCCTGGTGAGCCGCAATTCCCGTTCAGCGTTGACAGGGGATTTGTGCGATCACACCGGATGCAGCGCAAGCACTACCGTGGACTCTCAAACCCACAGTGTATTCATGGAATTGAGGTGGTGAGATCACCAAATCTTGCAAGCATAACTGAGGTAGACAGGAGGAGGTGGGTGGAGCTTACAGGGAGGGAGCTCAATTTCGCAATCCCGCAGGAGGCCTGTGATTTTGGGACATGGAGGACTATGCCAAACACAGAGATTGAGCTTGACAGGCCACATCCTGTCATGAAGGGCAACGTTCATCAACACCCAAAGAAGCTGCTTAATGGATCTGGCTTGAATTTGTCATCACCCTCCAATCACTCAGGAGAAGATGGCATGGATCTCTCCCCAGTTAGCAGCAAGCGCAGGAAGGAGGTGTTTCCGCATGCCATGGATGAGGAATGCTTCTTGCCACTCAACTCTTGCGGCGAGAGGACACAACAAGGTGTGGAGATGCATTCAGTAGTGCAGCCTTCATGGCAGCACGAATTTTCTGGGGTGATGAAAAAGGCTCGCGGGCCTGTGACTGCCGCCAAGTCGATTTATGAAGATGACCAAGGCTACTTGATAATGGTCAGCTTACCATTTGTTGATCAGCAGAAGGTGAAAGTTTCATGGAGGAACAGTCTTACTCATGGTATAGTAAAGATCCTTTGTGTTAGTACAGCCCAGACGCCATACATCAGAAGGCATGACAGGGTATTCAAGCTTGCTGATCCTATGCCTGAGCACTGCCCTCATGGGGAATTTGTCCGTGAAATACCTCTAGCAACTCGCATCCCTGAAGACGCTAAGCTAGAAGCATACTTTGATGAGGCCGCTGCAGTGCTTGAGATCATGGTTCCCAAACGTGGAAATGAGCCAGAAGAACATGAAGTAAGAGTCTCTATGCGCCCCCCTCACCTTGCAGCTAACGATCTACTCCTGACATAACCAGTGGAAGGTCTATCAACCATATAGTCTTGTTTCTGACCACCAGATCAATGCCCAAACATGGCTGAGAAGGTATGAGCATGA]
[+] EMBL OSS3564A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGTGGCGGTGGCGGTGGCCA CACAGCCTCTGCACCCTTCTCTCCATGGATCCCGCCGGCCACCTCGACGACCGCGCCGTCGGGGTCATGGTGCAGCCCCGCATCGGGGACGGCGCCGGGCGCGCCCACGCCGTGTCGCTCTCCGGCGCGCATCCGCCGGACATCAACCAGCCGTGGCAGACTGACCTCTGCNACATGCTCGACGTCAGCCTCGGCCCGCAGATTCAGGTGTACGACGCCGAGGCGCTCGCCGTGCTGAGCAGTGCCCCGAA GCTGGGAACCGCAAGGCCGCCAAGCGCGGGGACAGCATCTGGGGCGCCTGGTTCTTCTTCACGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU222861             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACCTCGACGACCGCGCCGTCGGGGTCATGGTGCAGCCCCGCATCGGGGACGGCGCCGGGCGCGCCCACGCCGTGTCGCTCTCCGGCGCGCATCCGCCGGACATCAACCAGCCGTGGCAGACTGACCTCTGCGACATGCTCGACGTCAGCCTCGGCCCGCAGATTCAGGTGTACGACGCCGAGGCGCTCGCCGTGCTGAGCAGTGCCCCGAAGGCTGGGAACCGCAAGGCCGCCAAGCGCGGGGACAGCATCTGGGGCGCCTGGTTCTTCTTCACGTTCTACTTCAAGCCCCTGCTCGCGGACAAGTGCAAAGGCAAGGTCACCCGGGATGCCAACGGTGTGTCAGGGTTTGACAAGACGGATCTCCGGCTCGACATGTTCATGGTGCAGCACGACATGGAGAACATGTACATGTGGGTCTTCAAGGAGCGGCCGGAGAATGCCCTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB653331             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACGTTCTACTTCAAGCCCCTGCTCGCGGACAAGTGCAAAGGCAAGGTCACCCGGGATGCCAACGGTGTGTCAGGGTTTGACAAGACGGATCTCCGGCTCGACATGTTCATGGTGCAGCACGACATGGAGAACATGTACATGTGGGTCTTCAAGGAGCGGCCGGAGAATGCCCTTGGCAAGATGCAGCTGAGGAGCTACATGAACGGGCACTCCCGCCCTGGTGAGCCGCAATTCCCGTTCAGCGTTGACAGGGGATTTGTGCGATCACACCGGATGCAGCGCAAGCACTACCGTGGACTCTCAAACCCACAGTGTATTCATGGAATTGAGGTGGTGAGATCACCAAATCTTGCAAGCATAACTGAGGTAGACAGGAGGAGGTGGGTGGAGCTTACAGGGAGGGAGCTCAATTTCGCAATCCCGCAGGAGGCCTGTGATTTTGGGACATGGAGGACTATGCCAAACATAGAGATTGAGCTTGACAGGCCACATCCTGTCATGAAGGGCAACGTTCATCAACACCCAAAGAAGCTGCTTAATGGATCTGGCTTGAATTTGTCATCACCCTCCAATCACTCAGGAGAAGATGGCATGGATCTCTCCCCAGTTAGCAGCAAGCGCAGGAAGGAGGTGTTTCCGCATGCCATGGATGAGGAATGCTTCTTGCCACTCAACTCTTGCGGCGAGAGGACACAACAAGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BP184798             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAGAAGATGGCATGGATCTCTCCCCAGTTAGCAGCAAGCGCAGGAAGGAGGTGTTTCCGCATGCCATGGATGAGGAATGCTTCTTGCCACTCAACTCTTGCGGCGAGAGGACACAACAAGATGTGGAGATGCATTCAGTAGTGCAGCCTTCATGGCAGCACGAATTTTCTGGGGTGATGAAAAAGGCTCGCGGGCCTGTGACTGCCGCCAAGTCGATTTATGAAGATGACCAAGGCTACTTGATAATGGTCAGCTTACCATTTGTTGATCAGCAGAAGGTGAAAGTTTCATGGAGGAACAGTCTTACTCATGGTATAGTAAAGATCCTTTGTGTTAGTACAGCCCAGACGCCATACATCAGAAGGCATGACAGGGTATTCAAGCTTGCTGATCCTATGCCTGAGCACTGCCCTCATGGGGAATTTGTCCGTGAAATACCTCTAGCAACTCGCATCCCTGAAGACGCTAAGCTAGAAGCATACTTTGATGAGGCCGCTGCAGTGCTTGAGATCATGGTTCCCAAACGTGGAAATGAGCCAGAAGAACATGAAGTAAGAGTCTCT                                                                                                                                 ]
[+] EMBL CA998042             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGATGACCAAGGCTACTTGATAATGGTCAGCTTACCATTTGTTGATCAGCAGAAGGTGAAAGTTTCATGGAGGAACAGTCTTACTCATGGTATAGTAAAGATCCTTTGTGTTAGTACAGCCCAGACGCCATACATCAGAAGGCATGACAGGGTATTCAAGCTTGCTGATCCTATGCCTGAGCACTGCCCTCATGGGGAATTTGTCCGTGAAATACCTCTAGCAACTCGCATCCCTGAAGACGCTAAGCTAGAAGCATACTTTGATGAGGCCGCTGCAGTGCTTGAGATCATGGTTCCCAAACGTGGAAATGAGCCAGAAGAACATGAAGTAAGAGTCTCTATGCGCCCCCCTCACCTTGCAGCTAACGATCTACTCCTGACATAACCAGTGGAAGGTCTATCAACCATATAGTCTTGTTTCTGACCACCAGATCAATGCCCAAACATGGCTGAGAAGGTATGAGCATGA]
[+] EMBL BI808261             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AAGCATACTTTGATGA GCCGCT CAGTGCTTGAGATCATGGTTCCCAAACGTGGAAATGAGCCAGAAGCACATGAAGTAAGAGTCTCTATGCGCCCCCCTCACCTTGCAGCTAACGATCTACTCCTGACATAACCAGTGGAAGGTCTATCAACCATATAGTCTTGTTTCTGACCACCAGATC ATGCCCAAACATGGCTGAGAAGGTATGAGCATGA]




>consensus_11977#0
TTTCTCCCACCTCGCCGCGCACCCCTCCCCTCCCCATGTCCTCGCCTTCCTCCCCGCGCT
CTTGCTCCCGCAGCTTCACGCTTCCCCCGCACTAGTACAGACTCCTGATGGTGGTGGAGG
TAAACCTCGGCGGCTAACCCATCGTCCACCGCGCGCGGCGGCTCTGTTTTTGGTTTGGGC
GGCATTTTGGTCTCCTTGGGGGTGTGGATTTGGGTTGGGGGGGAGGAGAGCTGGGTGAAG
ATTTGTGGCGGAAACTGTTGGGGGGGAATTGATGGTGGGATTCATGGAGTGCGTGCACGA
TTGGTTGCTGTGGGACGCCGTCCTGGAATGCGGAGGGATCCGGAGGCCACCGATTAGATA
GCGGCCGGGGGAGGAGGGAGAGGAGAGGAGAGAGGAGCAGGCGGTGGCAGAGGCGGAGGC
CGTCGCCATTAGCACCAGTCACCCCGAGGCGCGAGTCACCAAGCCATGGGGGAAGACCTC
GTCACCACCCTGTCCATGGAGAACGGCGGCGGTGGCGGTGGCGGTGGCCACCACAGCCTC
TGCACCCTTCTCTCCATGGATCCCGCCGGCCACCTCGACGACCGCGCCGTCGGGGTCATG
GTGCAGCCCCGCATCGGGGACGGCGCCGGGCGCGCCCACGCCGTGTCGCTCTCCGGCGCG
CATCCGCCGGACATCAACCAGCCGTGGCAGACTGACCTCTGCGACATGCTCGACGTCAGC
CTCGGCCCGCAGATTCAGGTGTACGACGCCGAGGCGCTCGCCGTGCTGAGCAGTGCCCCG
AAGGCTGGGAACCGCAAGGCCGCCAAGCGCGGGGACAGCATCTGGGGCGCCTGGTTCTTC
TTCACGTTCTACTTCAAGCCCCTGCTCGCGGACAAGTGCAAAGGCAAGGTCACCCGGGAT
GCCAACGGTGTGTCAGGGTTTGACAAGACGGATCTCCGGCTCGACATGTTCATGGTGCAG
CACGACATGGAGAACATGTACATGTGGGTCTTCAAGGAGCGGCCGGAGAATGCCCTTGGC
AAGATGCAGCTGAGGAGCTACATGAACGGGCACTCCCGCCCTGGTGAGCCGCAATTCCCG
TTCAGCGTTGACAGGGGATTTGTGCGATCACACCGGATGCAGCGCAAGCACTACCGTGGA
CTCTCAAACCCACAGTGTATTCATGGAATTGAGGTGGTGAGATCACCAAATCTTGCAAGC
ATAACTGAGGTAGACAGGAGGAGGTGGGTGGAGCTTACAGGGAGGGAGCTCAATTTCGCA
ATCCCGCAGGAGGCCTGTGATTTTGGGACATGGAGGACTATGCCAAACACAGAGATTGAG
CTTGACAGGCCACATCCTGTCATGAAGGGCAACGTTCATCAACACCCAAAGAAGCTGCTT
AATGGATCTGGCTTGAATTTGTCATCACCCTCCAATCACTCAGGAGAAGATGGCATGGAT
CTCTCCCCAGTTAGCAGCAAGCGCAGGAAGGAGGTGTTTCCGCATGCCATGGATGAGGAA
TGCTTCTTGCCACTCAACTCTTGCGGCGAGAGGACACAACAAGATGTGGAGATGCATTCA
GTAGTGCAGCCTTCATGGCAGCACGAATTTTCTGGGGTGATGAAAAAGGCTCGCGGGCCT
GTGACTGCCGCCAAGTCGATTTATGAAGATGACCAAGGCTACTTGATAATGGTCAGCTTA
CCATTTGTTGATCAGCAGAAGGTGAAAGTTTCATGGAGGAACAGTCTTACTCATGGTATA
GTAAAGATCCTTTGTGTTAGTACAGCCCAGACGCCATACATCAGAAGGCATGACAGGGTA
TTCAAGCTTGCTGATCCTATGCCTGAGCACTGCCCTCATGGGGAATTTGTCCGTGAAATA
CCTCTAGCAACTCGCATCCCTGAAGACGCTAAGCTAGAAGCATACTTTGATGAGGCCGCT
GCAGTGCTTGAGATCATGGTTCCCAAACGTGGAAATGAGCCAGAAGAACATGAAGTAAGA
GTCTCTATGCGCCCCCCTCACCTTGCAGCTAACGATCTACTCCTGACATAACCAGTGGAA
GGTCTATCAACCATATAGTCTTGTTTCTGACCACCAGATCAATGCCCAAACATGGCTGAG
AAGGTATGAGCATGA

consensusID : consensus_11977#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 803
fasta sequence

                              [TTCCGCATGCCATGGATGAGGAATGCTTCTTGCCACTCAACTCTTGCGGCGAGAGGACACAACAAGATGTGGAGATGCATTCAGTAGTGCAGCCTTCATGGCAGCACGAATTTTCTGGGGTGATGAAAAAGGCTCGCGGGCCTGTGACTGCCGCCAAGTCGATTTATGAAGATGACCAAGGCTACTTGATAATGGTCAGCTTACCATTTGTTGATCAGCAGAAGGTGAAAGTTTCATGGAGGAACAGTCTTACTCATGGTATAGTAAAGATCCTTTGTGTTAGTACAGCCCAGACGCCATACATCAGAAGGCATGACAGGGTATTCAAGCTTGCTGATCCTATGCCTGAGCACTGCCCTCATGGGGAATTTGTCCGTGAAATACCTCTAGCAACTCGCATCCCTGAAGACGCTAAGCTAGAAGCATACTTTGATGAGGCCGCTGCAGTGCTTGAGATCATGGTTCCCANACGTGGAAATGAGCCAGAAGAACATGAAGTAAGAGTCTCTATGCGCCCCNCTACCTTGCAGCTAACGATCTACTNCTGACCTAACCAGTGGAAAGTCTATCAACCTTATAGCCTGTTCTGACCACAAATCATGCGCAACCTGGGTAAAGGGTTTACCTGACTTGTTGGAATTTGGCTCCGGAATATTGCGACTGCCATGGCCTTTTACAAGATTGTTAAGGGCTCCCATATGTCCAATATTAAGAGGGGGTTATAGCGCCTACTAGTTTTCGAAATAGGCAAAGGATTTAAATATGGCTGTTGATACTCATATATTGGACGTTTTCCTAAGAAA]

[+] EMBL AW154998             [TTCCGCATGCCATGGATGAGGAATGCTTCTTGCCACTCAACTCTTGCGGCGAGAGGACACAACAAGATGTGGAGATGCATTCAGTAGTGCAGCCTTCATGGCAGCACGAATTTTCTGGGGTGATGAAAAAGGCTCGCGGGCCTGTGACTGCCGCCAAGTCGATTTATGAAGATGACCAAGGCTACTTGATAATGGTCAGCTTACCATTTGTTGATCAGCAGAAGGTGAAAGTTTCATGGAGGAACAGTCTTACTCATGGTATAGTAAAGATCCTTTGTGTTAGTACAGCCCAGACGCCATACATCAGAAGGCATGACAGGGTATTCAAGCTTGCTGATCCTATGCCTGAGCACTGCCCTCATGGGGAATTTGTCCGTGAAATACCTCTAGCAACTCGCATCCCTGAAGACGCTAAGCTAGAAGCATACTTTGATGAGGCCGCTGCAGTGCTTGAGATCATGGTTCCCANACGTGGAAATGAGCCAGAAGAACATGAAGTAAGAGTCTCTATGCGCCCCNCTACCTTGCAGCTAACGATCTACTNCTGACCTAACCAGTGGAAAGTCTATCAACCTTATAGCCTGTTCTGACCACAAATCATGCGCAACCTGGGTAAAGGGTTTACCTGACTTGTTGGAATTTGGCTCCGGAATATTGCGACTGCCATGGCCTTTTACAAGATTGTTAAGGGCTCCCATATGTCCAATATTAAGAGGGGGTTATAGCGCCTACTAGTTTTCGAAATAGGCAAAGGATTTAAATATGGCTGTTGATACTCATATATTGGACGTTTTCCTAAGAAA]




>consensus_11977#1
TTCCGCATGCCATGGATGAGGAATGCTTCTTGCCACTCAACTCTTGCGGCGAGAGGACAC
AACAAGATGTGGAGATGCATTCAGTAGTGCAGCCTTCATGGCAGCACGAATTTTCTGGGG
TGATGAAAAAGGCTCGCGGGCCTGTGACTGCCGCCAAGTCGATTTATGAAGATGACCAAG
GCTACTTGATAATGGTCAGCTTACCATTTGTTGATCAGCAGAAGGTGAAAGTTTCATGGA
GGAACAGTCTTACTCATGGTATAGTAAAGATCCTTTGTGTTAGTACAGCCCAGACGCCAT
ACATCAGAAGGCATGACAGGGTATTCAAGCTTGCTGATCCTATGCCTGAGCACTGCCCTC
ATGGGGAATTTGTCCGTGAAATACCTCTAGCAACTCGCATCCCTGAAGACGCTAAGCTAG
AAGCATACTTTGATGAGGCCGCTGCAGTGCTTGAGATCATGGTTCCCANACGTGGAAATG
AGCCAGAAGAACATGAAGTAAGAGTCTCTATGCGCCCCNCTACCTTGCAGCTAACGATCT
ACTNCTGACCTAACCAGTGGAAAGTCTATCAACCTTATAGCCTGTTCTGACCACAAATCA
TGCGCAACCTGGGTAAAGGGTTTACCTGACTTGTTGGAATTTGGCTCCGGAATATTGCGA
CTGCCATGGCCTTTTACAAGATTGTTAAGGGCTCCCATATGTCCAATATTAAGAGGGGGT
TATAGCGCCTACTAGTTTTCGAAATAGGCAAAGGATTTAAATATGGCTGTTGATACTCAT
ATATTGGACGTTTTCCTAAGAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11977#0      TTTCTCCCACCTCGCCGCGCACCCCTCCCCTCCCCATGTCCTCGCCTTCCTCCCCGCGCT 60
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      CTTGCTCCCGCAGCTTCACGCTTCCCCCGCACTAGTACAGACTCCTGATGGTGGTGGAGG 120
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      TAAACCTCGGCGGCTAACCCATCGTCCACCGCGCGCGGCGGCTCTGTTTTTGGTTTGGGC 180
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      GGCATTTTGGTCTCCTTGGGGGTGTGGATTTGGGTTGGGGGGGAGGAGAGCTGGGTGAAG 240
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      ATTTGTGGCGGAAACTGTTGGGGGGGAATTGATGGTGGGATTCATGGAGTGCGTGCACGA 300
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      TTGGTTGCTGTGGGACGCCGTCCTGGAATGCGGAGGGATCCGGAGGCCACCGATTAGATA 360
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      GCGGCCGGGGGAGGAGGGAGAGGAGAGGAGAGAGGAGCAGGCGGTGGCAGAGGCGGAGGC 420
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      CGTCGCCATTAGCACCAGTCACCCCGAGGCGCGAGTCACCAAGCCATGGGGGAAGACCTC 480
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      GTCACCACCCTGTCCATGGAGAACGGCGGCGGTGGCGGTGGCGGTGGCCACCACAGCCTC 540
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      TGCACCCTTCTCTCCATGGATCCCGCCGGCCACCTCGACGACCGCGCCGTCGGGGTCATG 600
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      GTGCAGCCCCGCATCGGGGACGGCGCCGGGCGCGCCCACGCCGTGTCGCTCTCCGGCGCG 660
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      CATCCGCCGGACATCAACCAGCCGTGGCAGACTGACCTCTGCGACATGCTCGACGTCAGC 720
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      CTCGGCCCGCAGATTCAGGTGTACGACGCCGAGGCGCTCGCCGTGCTGAGCAGTGCCCCG 780
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      AAGGCTGGGAACCGCAAGGCCGCCAAGCGCGGGGACAGCATCTGGGGCGCCTGGTTCTTC 840
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      TTCACGTTCTACTTCAAGCCCCTGCTCGCGGACAAGTGCAAAGGCAAGGTCACCCGGGAT 900
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      GCCAACGGTGTGTCAGGGTTTGACAAGACGGATCTCCGGCTCGACATGTTCATGGTGCAG 960
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      CACGACATGGAGAACATGTACATGTGGGTCTTCAAGGAGCGGCCGGAGAATGCCCTTGGC 1020
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      AAGATGCAGCTGAGGAGCTACATGAACGGGCACTCCCGCCCTGGTGAGCCGCAATTCCCG 1080
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      TTCAGCGTTGACAGGGGATTTGTGCGATCACACCGGATGCAGCGCAAGCACTACCGTGGA 1140
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      CTCTCAAACCCACAGTGTATTCATGGAATTGAGGTGGTGAGATCACCAAATCTTGCAAGC 1200
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      ATAACTGAGGTAGACAGGAGGAGGTGGGTGGAGCTTACAGGGAGGGAGCTCAATTTCGCA 1260
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      ATCCCGCAGGAGGCCTGTGATTTTGGGACATGGAGGACTATGCCAAACACAGAGATTGAG 1320
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      CTTGACAGGCCACATCCTGTCATGAAGGGCAACGTTCATCAACACCCAAAGAAGCTGCTT 1380
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      AATGGATCTGGCTTGAATTTGTCATCACCCTCCAATCACTCAGGAGAAGATGGCATGGAT 1440
consensus_11977#1      ------------------------------------------------------------
                                                                                   

consensus_11977#0      CTCTCCCCAGTTAGCAGCAAGCGCAGGAAGGAGGTGTTTCCGCATGCCATGGATGAGGAA 1500
consensus_11977#1      -------------------------------------TTCCGCATGCCATGGATGAGGAA 23
                                                            ***********************

consensus_11977#0      TGCTTCTTGCCACTCAACTCTTGCGGCGAGAGGACACAACAAGATGTGGAGATGCATTCA 1560
consensus_11977#1      TGCTTCTTGCCACTCAACTCTTGCGGCGAGAGGACACAACAAGATGTGGAGATGCATTCA 83
                       ************************************************************

consensus_11977#0      GTAGTGCAGCCTTCATGGCAGCACGAATTTTCTGGGGTGATGAAAAAGGCTCGCGGGCCT 1620
consensus_11977#1      GTAGTGCAGCCTTCATGGCAGCACGAATTTTCTGGGGTGATGAAAAAGGCTCGCGGGCCT 143
                       ************************************************************

consensus_11977#0      GTGACTGCCGCCAAGTCGATTTATGAAGATGACCAAGGCTACTTGATAATGGTCAGCTTA 1680
consensus_11977#1      GTGACTGCCGCCAAGTCGATTTATGAAGATGACCAAGGCTACTTGATAATGGTCAGCTTA 203
                       ************************************************************

consensus_11977#0      CCATTTGTTGATCAGCAGAAGGTGAAAGTTTCATGGAGGAACAGTCTTACTCATGGTATA 1740
consensus_11977#1      CCATTTGTTGATCAGCAGAAGGTGAAAGTTTCATGGAGGAACAGTCTTACTCATGGTATA 263
                       ************************************************************

consensus_11977#0      GTAAAGATCCTTTGTGTTAGTACAGCCCAGACGCCATACATCAGAAGGCATGACAGGGTA 1800
consensus_11977#1      GTAAAGATCCTTTGTGTTAGTACAGCCCAGACGCCATACATCAGAAGGCATGACAGGGTA 323
                       ************************************************************

consensus_11977#0      TTCAAGCTTGCTGATCCTATGCCTGAGCACTGCCCTCATGGGGAATTTGTCCGTGAAATA 1860
consensus_11977#1      TTCAAGCTTGCTGATCCTATGCCTGAGCACTGCCCTCATGGGGAATTTGTCCGTGAAATA 383
                       ************************************************************

consensus_11977#0      CCTCTAGCAACTCGCATCCCTGAAGACGCTAAGCTAGAAGCATACTTTGATGAGGCCGCT 1920
consensus_11977#1      CCTCTAGCAACTCGCATCCCTGAAGACGCTAAGCTAGAAGCATACTTTGATGAGGCCGCT 443
                       ************************************************************

consensus_11977#0      GCAGTGCTTGAGATCATGGTTCCCAAACGTGGAAATGAGCCAGAAGAACATGAAGTAAGA 1980
consensus_11977#1      GCAGTGCTTGAGATCATGGTTCCCANACGTGGAAATGAGCCAGAAGAACATGAAGTAAGA 503
                       ************************* **********************************

consensus_11977#0      GTCTCTATGCGCCCCCCTCACCTTGCAGCTAACGATCTACTCCTGACATAACCAGTGGAA 2040
consensus_11977#1      GTCTCTATGCGCCCCNCT-ACCTTGCAGCTAACGATCTACTNCTGACCTAACCAGTGGAA 562
                       *************** ** ********************** ***** ************

consensus_11977#0      GGTCTATCAACCATATAGTCTTGTTTCTGACCACCAGATCAATGCCCAAACATGGCTGAG 2100
consensus_11977#1      AGTCTATCAACCTTATAGCCTG--TTCTGACCAC-AAATCA-TGCGCAACCTGGGTAAAG 618
                        *********** ***** **   ********** * **** *** *** *  **   **

consensus_11977#0      AAGGTATGAGCATGA--------------------------------------------- 2115
consensus_11977#1      GGTTTACCTGACTTGTTGGAATTTGGCTCCGGAATATTGCGACTGCCATGGCCTTTTACA 678
                           **   *  *                                               

consensus_11977#0      ------------------------------------------------------------
consensus_11977#1      AGATTGTTAAGGGCTCCCATATGTCCAATATTAAGAGGGGGTTATAGCGCCTACTAGTTT 738
                                                                                   

consensus_11977#0      ------------------------------------------------------------
consensus_11977#1      TCGAAATAGGCAAAGGATTTAAATATGGCTGTTGATACTCATATATTGGACGTTTTCCTA 798
                                                                                   

consensus_11977#0      -----
consensus_11977#1      AGAAA 803