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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11980#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1729 fasta sequence
[GGCTCTCGCCGCCGCAGACCGCCTCCTCGCTCCCCTTCGTCTTCTCCCAGTGCCAGTCCATCCACGCCCGCTCCGTCTTCCCCTGCCACGACACCCCCGCCGCGCGCATCACCTTCGACCTCCTCCTCAACGTCCCCACCCAGCTCTCCGCGGTCGCCGCCGCGCGCCACGTCTCCCGCCGCGACCCCCTGCCCTCCGACCACCGGGGCGCCTGCGACGACGCGCTGTGGTGCGCGCCGGGCCGCATCGTGGAGGAGTTCCAGATGGAGCAGTCCGTGCCGCCCTACCTCTTCGCGTTCGCCGCAGGCGGGATCGGGTTCAGGGACCTCGGCCCGAGGACGCGGGTGTATGCCGAGGGAGGGGACAAGGTTCTCGACGAGGCGGCGAGGGAGTTCGCCGGCGTCGAGGAGATGGTCAAGGTTGGGGAGTCGCTGTTTGGGCCGTATGAGTGGGAGAGGTTTGATCTGCTGGTGTTGCCGCCCAGTTTCCCCTACGGTGGCATGGAGAACCCTAGAATGGTGTTCCTCACGCCCACGGTGATCAAGGGGGACGCTGCTGGGGCGCAAGTGGTGGCGCATGAGCTCGCGCACAGCTGGACTGGCAACCTGATCACTAACAAGACCAATGAAGATTTCTGGCTAAATGAGGGTTTCACAACATATGCGGAGCGGAGGATTGTTGAGGTGGTGCAAGGGGAGGAGCGGGCAGCCTTAAACATGGGAATTGGATGGCGGGGTTTGAACAGAATGATGGAGAGGTTTAAAGATAACATGGAGTATACTAAGCTGAAGCCAAAGATGGCAGGGATTGACCCTGATGATGTGTACTCAGAAGTTCCCTATGAGAAAGGCTTCCAATTCCTTTGGCGCATTGAGCGTCAGATTGGTCGACCTGCATTTGATGAATTCCTGAAGAATTACATATCCACATTTAAGTTCAAGTCGATAGACACAGAGACATTCCTTGAATTCCTGAAAACCAATGTACCTGGAATAGAAAACCAAATTGACCTTCAACTGTGGATCGAGGGGACTGGTATCCCTCCGGATGCCATGGAACCAGA-GT-CAGC--TATTTAT-AAAAAGATTTGCTCCCT-AGCT-GCAGAGTTT-AAGTCTGGAAAACTTCC--AAGTGAAGA-TGAGGTAGCAGACTGGAGTGGACAGGAATGGGAACTTTACTTGGAAAACTTACCCACAGATGTTGAAGCTTCACAGGTCACTGCTCTCGATGAGCGGTACAAGCTATCAGAAAGCTGTGACTACGAGGTCAAAGTCGCGTTTCTCCAGCTTGCAATTCCCACCGGCTGCAGATGCTACTTCAACGAGGTTGAGAAATGCTTGAAG-CAAGTGGGGAGGATGAAGTACCTTCGCCCGCTCTACAGCTCGCTGGCTCGATGCTCCGGGGAGGAGAAGATGCTTGCCCATAGGATCTTCTCAGAGGCGCATGAATTCTATCATCCCATCGCTCGTAGCGTCGCAGAGAGCATCCTCTCGAAGCATGGCTAAGCCGAAACCTATCCTTTTATATATCCTATATATTGCTGAACCTAAAGTAGG-AAGAACA--TTTGATGTTTATCGACTTGTTGCTCACTAGTAGTTTCATAAATTATCGCTCTCTGGAGTAACCCTGGGAAAAACTGGGAGCTCAAAACTGTGTCCTGACGGTATACAATTGTGAATTGTGACTGCGCATCAAAATTTCCTGGTCC-TAT-GAGTTGTTCTTCCCAATGCAAAAA]
[+] EMBL AK073744 [GGCTCTCGCCGCCGCAGACCGCCTCCTCGCTCCCCTTCGTCTTCTCCCAGTGCCAGTCCATCCACGCCCGCTCCGTCTTCCCCTGCCACGACACCCCCGCCGCGCGCATCACCTTCGACCTCCTCCTCAACGTCCCCACCCAGCTCTCCGCGGTCGCCGCCGCGCGCCACGTCTCCCGCCGCGACCCCCTGCCCTCCGACCACCGGGGCGCCTGCGACGACGCGCTGTGGTGCGCGCCGGGCCGCATCGTGGAGGAGTTCCAGATGGAGCAGTCCGTGCCGCCCTACCTCTTCGCGTTCGCCGCAGGCGGGATCGGGTTCAGGGACCTCGGCCCGAGGACGCGGGTGTATGCCGAGGGAGGGGACAAGGTTCTCGACGAGGCGGCGAGGGAGTTCGCCGGCGTCGAGGAGATGGTCAAGGTTGGGGAGTCGCTGTTTGGGCCGTATGAGTGGGAGAGGTTTGATCTGCTGGTGTTGCCGCCCAGTTTCCCCTACGGTGGCATGGAGAACCCTAGAATGGTGTTCCTCACGCCCACGGTGATCAAGGGGGACGCTGCTGGGGCGCAAGTGGTGGCGCATGAGCTCGCGCACAGCTGGACTGGCAACCTGATCACTAACAAGACCAATGAAGATTTCTGGCTAAATGAGGGTTTCACAACATATGCGGAGCGGAGGATTGTTGAGGTGGTGCAAGGGGAGGAGCGGGCAGCCTTAAACATGGGAATTGGATGGCGGGGTTTGAACAGAATGATGGAGAGGTTTAAAGATAACATGGAGTATACTAAGCTGAAGCCAAAGATGGCAGGGATTGACCCTGATGATGTGTACTCAGAAGTTCCCTATGAGAAAGGCTTCCAATTCCTTTGGCGCATTGAGCGTCAGATTGGTCGACCTGCATTTGATGAATTCCTGAAGAATTACATATCCACATTTAAGTTCAAGTCGATAGACACAGAGACATTCCTTGAATTCCTGAAAACCAATGTACCTGGAATAGAAAACCAAATTGACCTTCAACTGTGGATCGAGGGGACTGGTATCCCTCCGGATGCCATGGAACCAGA GT CAGC TATTTAT AAAAAGATTTGCTCCCT AGCT GCAGAGTTT AAGTCTGGAAAACTTCC AAGTGAAGA TGAGGTAGCAGACTGGAGTGGACAGGAATGGGAACTTTACTTGGAAAACTTACCCACAGATGTTGAAGCTTCACAGGTCACTGCTCTCGATGAGCGGTACAAGCTATCAGAAAGCTGTGACTACGAGGTCAAAGTCGCGTTTCTCCAGCTTGCAATTCCCACCGGCTGCAGATGCTACTTCAACGAGGTTGAGAAATGCTTGAAG CAAGTGGGGAGGATGAAGTACCTTCGCCCGCTCTACAGCTCGCTGGCTCGATGCTCCGGGGAGGAGAAGATGCTTGCCCATAGGATCTTCTCAGAGGCGCATGAATTCTATCATCCCATCGCTCGTAGCGTCGCAGAGAGCATCCTCTCGAAGCATGGCTAAGCCGAAACCTATCCTTTTATATATCCTATATATTGCTGAACCTAAAGTAGG AAGAACA TTTGATGTTTATCGACTTGTTGCTCACTAGTAGTTTCATAAATTATCGCTCTCTGGAGTAACCCTGGGAAAAACTGGGAGCTCAAAACTGTGTCCTGACGGTATACAATTGTGAATTGTGACTGCGCATCAAAATTTCCTGGTCC TAT GAGTTGTT ]
[+] EMBL CB643335 [ CCCCTGCCCTCCGACCACCGGGGCGCCTGCGACGACGCGCTGTGGTGCGCGCCGGGCCGCATCGTGGAGGAGTTCCAGATGGAGCAGTCCGTGCCGCCCTACCTCTTCGCGTTCGCCGCAGGCGGGATCGGGTTCAGGGACCTCGGCCCGAGGACGCGGGTGTATGCCGAGGGAGGGGACAAGGTTCTCGACGAGGCGGCGAGGGAGTTCGCCGGCGTCGAGGAGATGGTCAAGGTTGGGGAGTCGCTGTTTGGGCCGTATGAGTGGGAGAGGTTTGATCTGCTGGTGTTGCCGCCCAGTTTCCCCTACGGTGGCATGGAGAACCCTAGAATGGTGTTCCTCACGCCCACGGTGATCAAGGGGGACGCTGCTGGGGCGCAAGTGGTGGCGCATGAGCTCGCGCACAGCTGGACTGGCAACCTGATCACTAACAAGACCAATGAAGATTTCTGGCTAAATGAGGGTTTCACAACATATGCGGAGCGGAGGATTGTTGAGGTGGTGCAAGGGGAGGAGCGGGCAGCCTTAAACATGGGAATTGGATGGCGGGGTTTGAACAGAATGATGGAGAGGTTTAAAGATAACATGGAGTATACTAAGCTGAAGCCAAAGATGGCAGGGATTGACCCTGATGATGTGTACTCAGAAGTTCCCTATGAGAAAGGCTTCCAATTCCTTTGGCGCATTGAGCGTCAGATTGGTCGACCTGCATTTGATGAATTCCTGAAGAATTACATATCCACATTTAAGTTCAAG ]
[-] EMBL CB643336 [ CGACCTGCATTTGATGAATTCCTGAAGAATTACATATCCACATTTAAGTTCAAGTCGATAGACACAGAGACATTCCTTGAATTCCTGAAAACCAATGTACCTGGAATAGAAAACCAAATTGACCTTCAACTGTGGATCGAGGGGACTGGTATCCCTCCGGATGCCATGGAACCAGA GT CAGC TATTTAT AAAAAGATTTGCTCCCT AGCT GCAGAGTTT AAGTCTGGAAAACTTCC AAGTGAAGA TGAGGTAGCAGACTGGAGTGGACAGGAATGGGAACTTTACTTGGAAAACTTACCCACAGATGTTGAAGCTTCACAGGTCACTGCTCTCGATGAGCGGTACAAGCTATCAGAAAGCTGTGACTACGAGGTCAAAGTCGCGTTTCTCCAGCTTGCAATTCCCACCGGCTGCAGATGCTACTTCAACGAGGTTGAGAAATGCTTGAAG CAAGTGGGGAGGATGAAGTACCTTCGCCCGCTCTACAGCTCGCTGGCTCGATGCTCCGGGGAGGAGAAGATGCTTGCCCATAGGATCTTCTCAGAGGCGCATGAATTCTATCATCCCATCGCTCGTAGCGTCGCAGAGAGCATCCTCTCGAAGCATGGCTAAGCCGAAACCTATCCTTTTATATATCCTATATATTGCTGAACCTAAAGTAGG AAGAACA TTTGATGTTTATCGACTTGTTGCTCACTAGTAGTTTCATAAATTATCGCTCTCTGGAGTAACCCTGGGAAAAACTGGGAGCTCAAAACTGTGTCCTGACGGTATACAATTGTGAA ]
[-] EMBL CB652826 [ GTACCTGGAATAGAAAACCAAATTGACCTTCAACTGTGGATCGAGGGGACTGGTATCCCTCCGGATGCCATGGAACCAGA GT CAGC TATTTAT AAAAAGATTTGCTCCCT AGCT GCAGAGTTT AAGTCTGGAAAACTTCC AAGTGAAGA TGAGGTAGCAGACTGGAGTGGACAGGAATGGGAACTTTACTTGGAAAACTTACCCACAGATGTTGAAGCTTCACAGGTCACTGCTCTCGATGAGCGGTACAAGCTATCAGAAAGCTGTGACTACGAGGTCAAAGTCGCGTTTCTCCAGCTTGCAATTCCCCCCGGCTGCAGATGCTACTTCAACGAGGTTGAGAAATGCTTGAAG CAAGTGGGGAGGATGAAGTACCTTCGCCCGCTCTACAGCTCGCTGGCTCGATGCTCCGGGGAGGAGAAGATGCTTGCCCATAGGATTTTTTCAGAGGCGCATGAATTTTATCATCCCATCGCTCGTAGCGTCGCAGAGAGCATCCTCTCGAAGCATGGTTAACCCGAAACCTATCCTTTTATATATCCTATATATTGCTGACCCTAAAGTAGG AAGAACA TTTGATGTTTATCGACTTGTTGCTCACTAGTAGTTTCATAAATTATCGCTCTCTGGAGTAACCCTGGGAAAAACTGGGAGCTCAAAACTGTGTCCTGACGGTATACAATTGTGAATTGTGACTGCGCATCAAAATTT ]
[+] EMBL BM038294 [ CCAGATCTCCAGCTTTTTTTATAAAAAAGATTTG NCCCTAACCTCCCAGAATTTAAATTCTGGGAAACTTCCCAAAGGGAAGATTGAGGTAACAAACT GATTGGACAGGAATGGGAACTTTACTTG AAACTTACCCACAGATGTTGAAGCTTCACAGGTCACTGCTCTCGATGAGCGGTACAAGCTATCAGAAA CCGTGACTACGAGGTCAAAGTCGCGTTTCTCCAGCTTGCAATTCCCACCGGCTGCAGATGCTACTTCAACGAGGTTGAGAAATGCTTGAAGCCAAGTGGGGAGGATGAAGTACCTTCGCCCGCTCTACAGCTCGCTGGCTCGATGCTCCGGGGAGGAGAAGATGCTTGCCCATAGGATCTTCTCAGAGGCGCATGAATTCTATCATCCCATCGCTCGTAGCGTCGCAGAGAGCATCCTCTCGAAGCATGGCTAAGCCGAAACCTATCCCTTTATATATCCTATATATTGCTGAACCTAAAGTAGGNCAGAACACNCTTGATGTTTATCGACTTGTTGCTCACTAGTAGTTTCATAAATTATCGCTCTCTGGAGTAACCCTGGGAAAAACTGGGAGCTC AAACTGTGTCCTGATGGTATACAATTGTGAATTGTGACTGCGCATCAAAATTTCCTGGTCCNCATCGAGTTGTCCTTCCCAATGCAAAAA]
consensusID : consensus_11980#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 628 fasta sequence
[GAAGGAGTAGAAACTAGCTGCAGAGTTTAAGTCTGGAAAACTTCCAAGTGAAGATGAGGTAGCAGACTGGAGTGGACAGGAATGGGAACTTTACTTGGAAAACTTA--CCCACAGATGTTGAAGCTTCACAGGTCACTGCTCTCGATGAGCGGTACAAGCTATCAGAAAGCTGTGACTACGAGGTCAAAGTCGCGTTTCTCCAGCTTGCAATTCCCACCGGCTGCAGATGCTACTTCAACGAGGTTGAGAAATGCTTGAAGCAAGTGGGGAGGATGAAGTACCTTCGCCCGCTCTACAGCTCGCTGGCTCGATGCTCCGGGGAGGAGAAGATGCTTGCCCATAGGATCTTCTCAGAGGCGTCAATTCTATCATCCCATCGCTCGTAGCGTCGCAGAGAGCATCCTCTCGAAGCATGGCTAAGCCGAAACCTATCCTTTTATATATCCTATATATTGCTGAACCTAAAGTAGGAAGAACATTTGATGTTTATCGACTTGTTGCTCACTAGTAGTTTCATAAATTATCGCTCTCTGGAGTAACCCTGGGAAAAACTGGGAGCTCAAAACTGTGTCCTGACGGTATACAATTGTGAATTGTGACTGCGCATCAAAATTTCCTGGTCCAAAAAA]
[+] EMBL CF311400 [GAAGGAGTAGAAACTAGCTGCAGAGTTTAAGTCTGGAAAACTTCCAAGTGAAGATGAGGTAGCAGACTGGAGTGGACAGGAATGGGAACTTTACTTGGAAAACTTA CCCACAGATGTTGAAGCTTCACAGGTCACTGCTCTCGATGAGCGGTACAAGCTATCAGAAAGCTGTGACTACGAGGTCAAAGTCGCGTTTCTCCAGCTTGCAATTCCCACCGGCTGCAGATGCTACTTCAACGAGGTTGAGAAATGCTTGAAGCAAGTGGGGAGGATGAAGTACCTTCGCCCGCTCTACAGCTCGCTGGCTCGATGCTCCGGGGAGGAGAAGATGCTTGCCCATAGGATCTTCTCAGAGGCGTCAATTCTATCATCCCATCGCTCGTAGCGTCGCAGAGAGCATCCTCTCGAAGCATGGCTAAGCCGAAACCTATCCTTTTATATATCCTATATATTGCTGAACCTAAAGTAGGAAGAACATTTGATGTTTATCGACTTGTTGCTCACTAGTAGTTTCATAAATTATCGCTCTCTGGAGTAACCCTGGGAAAAACTGGGAGCTCAAAACTGTGTCCTGACGGTATACAATTGTGAATTGTGACTGCGCATCAAAATTTCCTGGTCCAAAAA ]
[-] EMBL CF311401 [ CAGACTGGAGTGGACAGGAATGGGAACTTTACTTGGAAAACTTACCCCCCCAGATGTTGAAGCTTCACAGGTCACTGCTCTCGATGAGCGGTACAAGCTATCAGAAAGCTGTGACTACGAGGTCAAAGTCGCGTTTCTCCAGCTTGCAATTCCCACCGGCTGCAGATGCTACTTCAACGAGGTTGAGAAATGCTTGAAGCAAGTGGGGAGGATGAAGTACCTTCGCCCGCTCTACAGCTCGCTGGCTCGATGCTCCGGGGAGGAGAAGATGCTTGCCCATAGGATCTTCTCAGAGGCGTCAATTCTATCATCCCATCGCTCGTAGCGTCGCAGAGAGCATCCTCTCGAAGCATGGCTAAGCCGAAACCTATCCTTTTATATATCCTATATATTGCTGAACCTAAAGTAGGAAGAACATTTGATGTTTATCGACTTGTTGCTCACTAGTAGTTTCATAAATTATCGCTCTCTGGAGTAACCCTGGGAAAAACTGGGAGCTCAAAACTGTGTCCTGACGGTATACAATTGTGAATTGTGACTGCGCATCAAAATTTCCTGGTCCAAAAAA]
consensusID : consensus_11980#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 450 fasta sequence
[CTGAGTGGACAGGAATGGGAACTTTACTGGAAAACTTACCCACAGATGTTGAAAGCTCACAGGTAACTGCTCTCGATGACGGTACAACTATCAGAAAGCTGTGACTACGAGGTCAAAGTCGCGTTTCTCCAGCTTGCAATTCCCACCGGCTGCAGATGCTACTTCAACGAGGTTGAGAAATGCTTGAAGCAAGTGGGGAGGATGAAGTACCTTCGCCCGCTCTACAGCTCGCTGGCTCGATGCTCCGGGGAGGAGAAGATGCTTGCCCATAGGATCTTCTCAGAGGCGCATGAATTCTATCATCCCATCGCTCGTAGCGTCGCAGAGAGCATCCTCTCGAAGCATGGCTAAGCCGAAACCTATCCTTTTATATNNCCTATATATTGCTGAACCTAAAGTAGGAAGAACATTTGATGTTTATCGACTTTAGGTTCAGCAATATATANNCGG]
[-] EMBL OSR3394A [CTGAGTGGACAGGAATGGGAACTTTACTGGAAAACTTACCCACAGATGTTGAAAGCTCACAGGTAACTGCTCTCGATGACGGTACAACTATCAGAAAGCTGTGACTACGAGGTCAAAGTCGCGTTTCTCCAGCTTGCAATTCCCACCGGCTGCAGATGCTACTTCAACGAGGTTGAGAAATGCTTGAAGCAAGTGGGGAGGATGAAGTACCTTCGCCCGCTCTACAGCTCGCTGGCTCGATGCTCCGGGGAGGAGAAGATGCTTGCCCATAGGATCTTCTCAGAGGCGCATGAATTCTATCATCCCATCGCTCGTAGCGTCGCAGAGAGCATCCTCTCGAAGCATGGCTAAGCCGAAACCTATCCTTTTATATNNCCTATATATTGCTGAACCTAAAGTAGGAAGAACATTTGATGTTTATCGACTTTAGGTTCAGCAATATATANNCGG]
consensusID : consensus_11980#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 279 fasta sequence
[CGCTTCGGTAAGCCTTCTCCAGGAAGAGCCATCCCTCTTCGAACCATGCTAACCCGAAACCTATCCCTTTATATATCCCTATATATTCTGAACCTAAAGTAGGAAGAACATTTGATTTTATCGACTTGTTGCTCACTAGTAGTTTCATAAATTATCGCTCTCTGGAGTAACCTGGGAAAAACTGGGAGCTCAAAACTGTGTCCTGATGGTATACATTGTGAATTGTGACTGCGCATCAAAATTTCCTGGTCCTATGAGTTGTGCCTTCCCATGCAAAAA]
[+] EMBL BI813484 [CGCTTCGGTAAGCCTTCTCCAGGAAGAGCCATCCCTCTTCGAACCATGCTAACCCGAAACCTATCCCTTTATATATCCCTATATATTCTGAACCTAAAGTAGGAAGAACATTTGATTTTATCGACTTGTTGCTCACTAGTAGTTTCATAAATTATCGCTCTCTGGAGTAACCTGGGAAAAACTGGGAGCTCAAAACTGTGTCCTGATGGTATACATTGTGAATTGTGACTGCGCATCAAAATTTCCTGGTCCTATGAGTTGTGCCTTCCCATGCAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11980#0 GGCTCTCGCCGCCGCAGACCGCCTCCTCGCTCCCCTTCGTCTTCTCCCAGTGCCAGTCCA 60
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 ------------------------------------------------------------
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 TCCACGCCCGCTCCGTCTTCCCCTGCCACGACACCCCCGCCGCGCGCATCACCTTCGACC 120
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 ------------------------------------------------------------
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 TCCTCCTCAACGTCCCCACCCAGCTCTCCGCGGTCGCCGCCGCGCGCCACGTCTCCCGCC 180
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 ------------------------------------------------------------
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 GCGACCCCCTGCCCTCCGACCACCGGGGCGCCTGCGACGACGCGCTGTGGTGCGCGCCGG 240
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 ------------------------------------------------------------
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 GCCGCATCGTGGAGGAGTTCCAGATGGAGCAGTCCGTGCCGCCCTACCTCTTCGCGTTCG 300
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 ------------------------------------------------------------
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 CCGCAGGCGGGATCGGGTTCAGGGACCTCGGCCCGAGGACGCGGGTGTATGCCGAGGGAG 360
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 ------------------------------------------------------------
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 GGGACAAGGTTCTCGACGAGGCGGCGAGGGAGTTCGCCGGCGTCGAGGAGATGGTCAAGG 420
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 ------------------------------------------------------------
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 TTGGGGAGTCGCTGTTTGGGCCGTATGAGTGGGAGAGGTTTGATCTGCTGGTGTTGCCGC 480
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 ------------------------------------------------------------
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 CCAGTTTCCCCTACGGTGGCATGGAGAACCCTAGAATGGTGTTCCTCACGCCCACGGTGA 540
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 ------------------------------------------------------------
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 TCAAGGGGGACGCTGCTGGGGCGCAAGTGGTGGCGCATGAGCTCGCGCACAGCTGGACTG 600
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 ------------------------------------------------------------
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 GCAACCTGATCACTAACAAGACCAATGAAGATTTCTGGCTAAATGAGGGTTTCACAACAT 660
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 ------------------------------------------------------------
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 ATGCGGAGCGGAGGATTGTTGAGGTGGTGCAAGGGGAGGAGCGGGCAGCCTTAAACATGG 720
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 ------------------------------------------------------------
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 GAATTGGATGGCGGGGTTTGAACAGAATGATGGAGAGGTTTAAAGATAACATGGAGTATA 780
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 ------------------------------------------------------------
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 CTAAGCTGAAGCCAAAGATGGCAGGGATTGACCCTGATGATGTGTACTCAGAAGTTCCCT 840
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 ------------------------------------------------------------
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 ATGAGAAAGGCTTCCAATTCCTTTGGCGCATTGAGCGTCAGATTGGTCGACCTGCATTTG 900
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 ------------------------------------------------------------
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 ATGAATTCCTGAAGAATTACATATCCACATTTAAGTTCAAGTCGATAGACACAGAGACAT 960
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 ------------------------------------------------------------
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 TCCTTGAATTCCTGAAAACCAATGTACCTGGAATAGAAAACCAAATTGACCTTCAACTGT 1020
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 ------------------------------------------------------------
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 GGATCGAGGGGACTGGTATCCCTCCGGATGCCATGGAACCAGAGTCAGCTATTTATAAAA 1080
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 ------------------------------------------------------------
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 AGATTTGCTCCCTAGCTGCAGAGTTTAAGTCTGGAAAACTTCCAAGTGAAGATGAGGTAG 1140
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 ------------------------------------------------------------
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 CAGACTGGAGTGGACAGGAATGGGAACTTTACTTGGAAAACTTACCCACAGATGTTGAAG 1200
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 ------------------------------------------------------------
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 CTTCACAGGTCACTGCTCTCGATGAGCGGTACAAGCTATCAGAAAGCTGTGACTACGAGG 1260
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 ------------------------------------------------------------
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 TCAAAGTCGCGTTTCTCCAGCTTGCAATTCCCACCGGCTGCAGATGCTACTTCAACGAGG 1320
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 -------------------------------GAAGGAGTAGAAACTAGCTGCAGAGTTTA 29
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 TTGAGAAATGCTTGAAGCAAGTGGGGAGGATGAAGTACCTTCGCCCGCTCTACAGCTCGC 1380
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 AGTCTGGAAAACTTCCAAGTGAAGATGAGGTAGCAGACTGGAGTGGACAGGAATGGGAAC 89
consensus_11980#2 --------------------------------------CTGAGTGGACAGGAATGGGAAC 22
consensus_11980#0 TGGCTCGATGCTCCGGGGAGGAGAAGATGCTTGCCCATAGGATCTTCTCAGAGGCGCATG 1440
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 TTTACTTGGAAAACTTACCCACAGATGTTGAAGCTTCACAGGTCACTGCTCTCGATGAGC 149
consensus_11980#2 TTTACT-GGAAAACTTACCCACAGATGTTGAAAGCTCACAGGTAACTGCTCTCGATGA-C 80
consensus_11980#0 AATTCTATCATCCCATCGCTCGTAGCGTCGCAG----AGAGCATCCTCTCGAA---GCAT 1493
consensus_11980#3 -------CGCTTCGGTAAGCCTTCTCCAGGAAG----AGCCATCCCTCTTCGA---ACCA 46
consensus_11980#1 GGTACAAGCTATCAGAAAGCTGTGACTACGAGGTCAAAGTCGCGTTTCTCCAGCTTGCAA 209
consensus_11980#2 GGTACAA-CTATCAGAAAGCTGTGACTACGAGGTCAAAGTCGCGTTTCTCCAGCTTGCAA 139
* * * * * ** *** *
consensus_11980#0 GGCTAAGCCGAAACCTATCC--TTTTATATATCC-TATATATTGCTGAACCTAAAGTAGG 1550
consensus_11980#3 TGCTAACCCGAAACCTATCC--CTTTATATATCCCTATATATT-CTGAACCTAAAGTAGG 103
consensus_11980#1 TTCCCACCGGCTGCAGATGCTACTTCAACGAGGTTGAGAAATGCTTGAAGC--AAGTGGG 267
consensus_11980#2 TTCCCACCGGCTGCAGATGCTACTTCAACGAGGTTGAGAAATGCTTGAAGC--AAGTGGG 197
* * * * * ** * ** * * * * ** **** * **** **
consensus_11980#0 AAGAACATTTGATGTTTATCGACT-TGTTGCTCACTAGTA----GTTTCAT--------A 1597
consensus_11980#3 AAGAACATTTGAT-TTTATCGACT-TGTTGCTCACTAGTA----GTTTCAT--------A 149
consensus_11980#1 GAGGATGAAGTACCTTCGCCCGCTCTACAGCTCGCTGGCTCGATGCTCCGGGGAGGAGAA 327
consensus_11980#2 GAGGATGAAGTACCTTCGCCCGCTCTACAGCTCGCTGGCTCGATGCTCCGGGGAGGAGAA 257
** * * ** * ** * **** ** * * * * *
consensus_11980#0 AATTATCGCTCTCTGGAGTAACCCTGGGA------AAAACTGGGAGCTCAAAACT-GTGT 1650
consensus_11980#3 AATTATCGCTCTCTGGAGTAACC-TGGGA------AAAACTGGGAGCTCAAAACT-GTGT 201
consensus_11980#1 GATGCTTGCCCATAGGATCTTCTCAGAGGCG--TCAATTCTATCATCCCATCGCTCGTAG 385
consensus_11980#2 GATGCTTGCCCATAGGATCTTCTCAGAGGCGCATGAATTCTATCATCCCATCGCTCGTAG 317
** * ** * *** * * * ** ** * * ** ** **
consensus_11980#0 CCTGACGGTATACAA--TTGTGAATTGTGACTGCGCATCAAAATTTCCTGGTCCTATGAG 1708
consensus_11980#3 CCTGATGGTATACA---TTGTGAATTGTGACTGCGCATCAAAATTTCCTGGTCCTATGAG 258
consensus_11980#1 CGTCGCAGAGAGCATCCTCTCGAAGCATGGCTAAGC-CGAAACCTATCCTTTTATATATC 444
consensus_11980#2 CGTCGCAGAGAGCATCCTCTCGAAGCATGGCTAAGC-CGAAACCTATCCTTTTATATNNC 376
* * * ** * *** ** ** ** *** * * * ***
consensus_11980#0 TTGTTCTTCCCAATGCAAAAA--------------------------------------- 1729
consensus_11980#3 TTGTGCCTTCCCATGCAAAAA--------------------------------------- 279
consensus_11980#1 CTATATATTGCTGAACCTAAAGTAGGAAGAACATTTGATGTTTATCGACTTGTTGCTCAC 504
consensus_11980#2 CTATATATTGCTGAACCTAAAGTAGGAAGAACATTTGATGTTTATCGACTTTAGGTTCAG 436
* * * * * ***
consensus_11980#0 ------------------------------------------------------------
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 TAGTAGTTTCATAAATTATCGCTCTCTGGAGTAACCCTGGGAAAAACTGGGAGCTCAAAA 564
consensus_11980#2 CAATATATANNCGG---------------------------------------------- 450
consensus_11980#0 ------------------------------------------------------------
consensus_11980#3 ------------------------------------------------------------
consensus_11980#1 CTGTGTCCTGACGGTATACAATTGTGAATTGTGACTGCGCATCAAAATTTCCTGGTCCAA 624
consensus_11980#2 ------------------------------------------------------------
consensus_11980#0 ----
consensus_11980#3 ----
consensus_11980#1 AAAA 628
consensus_11980#2 ----
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||