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Oryza sativa
cluster # 11984 cluster # 11984       Sequences # 9       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11984#0 length = 3036 sequences # 5  
 consensus_11984#1 length = 1777 sequences # 3  
consensus_11984#2 length = 598 sequences # 1  
consensusID : consensus_11984#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 3036
fasta sequence 
                              [TTTCTCCTTTCTCCCCTCGAGTCTGATCCTCCCACTACCAACGTCCACCGGCACCGCAACTTGCTGTCCTCTCCTGCCGGCTGGTCCAGCTCCATCTCTCTTCTTGCTCTGCCTCCCCCTTCAATTTAATTGATTCCTCCATCCAGATTTCGAGATCGAGATGAAGGCAGTGATGATGCACCACCATCACGCGGCACGCCCTGCGCGCTGTCCAAGGCCTATCTCTTCCTCCTCCTCCTCAGCCCTGTTGGGTAGCAGACCAACCAGAGTCTCCTCCCCATCAAACCTGCCAAAGTTGCTCATAAACCGGCGACACATCACCCCTCTTGCCACCAATGCTCCCCATGCTGTTGCTGAAGATGATGGCGCCATCTCTTTTGCTAATGCAACGCCAACGGAGCCTCCCATTGACTTGCGTCCCGGGGGTGTCAGAAATGAGCTAATTCTTCTAGCTCTACCAGCAGTTCTTGGCCAAGCTATTGATCCATTGGCGCAATTGATGGAGACTGCATATATTGGTAGATTAGGTATTATGGCGCTTGCCCTTCATAAAGTAGCTCTTGGGAGTGCTGAATTATAGCCATCCTTACTGCATGAAAGCAAGCTGTCCCTTCTTTTGCCATTCATCCTTCTTTTTCATATATTCTGAAGGGGCTCTGGAGCTAGCATCAGCTGGTATTGGTGTGTCGGTTTTTAATATCGTGTCTAAGATTTTCAACATTCCACTGTTGAGCATTGCAACCTCATTTGTGGCAGAAGACATTTCCAAGAATGCTAGCAAGCATTCAAGTTCAGGCAAATTGGAGCTGTCATCTGTATCTTCTGCATTGGTCTTAGCTGCTGGAATCGGTACAATTGAAGCATTGGCATTGTTCCTAGGATCAGGATTGTTTCTTAAACTAATGGGCGTGTCACCTGCCTCACCAATGCATAAACCTGCAAAACTTTTCCTTTCATTGAGAGCTTTGGGAGCACCTGCAAATGTGATTATGTTAGCAGTTCAGGGAATATTTCGTGGATTCAAGGATACTAAGACTCCTGTATTTTTTATAGGTTTGGGAAATCTTTCAGCTGTAGTGCTTCTTCCTTTACTTATTTACGTCTTTCGGCTTGGCATAACTGGAGCTGCAATTTCTACAGTTGCATCACAGTACATTATTACAATTTTGCTTCTCCAGTCTCTAAGTAAAAGAGCTGTTCTACTTCCTCCAAGGCTGGACCAGTTAGAGTTTAGCGGATATCTAAAATCTGGTGTCTTTTTCGTTCTTCTATCTCCCCCTCTCTCATTATATTCAATTGTTGTGCATGCTAAATCAGAGTTCTTACACTTTCATTGATCTCAGTGTCCGTTCATTTTGTTCATTCTACAATGTGCGGTTAACTGAAGTTCAGATTTTCTCTCCCAGGGGGCTTTGAGTTCTTTGGGTTAATTTGTCAAAATTTCCAATTCTGGATCCACTATGCATTTAACAATGATACCTTTATCGATAACAAGTTAATTGTAAAGTTTGGTTTTTGAAATAACTTTATATGCAAGAAAAAGGAAAGACTATCGTAGAGTAGATGGTGTAGGTACGGTTACTGCTAGTATATTTTACAGATATGTTGATCAGCTTGTCATTGATAGAGCTTTCATTCATGGGCCATGCCCATTCTGTCCACTAATGAATGGGCTGTTCAGGGAACTTCTATTCTCCATATTGTTTCGTGGTACCATTTATATGTAGTAAAATGTGCTCAATTCTAGGATTTGCAAATATTTGCTGTCATATTATTGGAAAGATAATGCATGTCTATGATATGCATCCTGAGAACCTCCATGTTATAATTTCATACTTCTTATCTTGTTTTTCCTTTTATTGCACTTACCACCATCTATAATTCCATCATCTGTTTTTGAAATGCTTAGGTGGCATGCTGTTAGGAAGAACCCTCTCGATTTTATTAACGATGACCATAGGGACATCAATGGCTGCTCGACAAGGCCCAACAGCTATGGCAGCTCATCAGATATGCTTACAAGTATGGCTTGCGGTATCTTTGCTTGCAGATGCTTTAGCTGTTTCTGCCCAGGCAATGATAGCAAGCTCCTATGCAATATTGGACTACAAGAGGGTCCAGAAGATAGCAATGTTTGCTTTGCAGGTCATGTGTCATTTCTCTGTTTTCTATTGTGAAGCTTTGTTTTTCATGTATTCATAGATGCAATCGCCCTTTCTTGTTAACATAGAAAAATGGAGATTTTCTTGCAGATAGGAGTAGTCAGTGGATTAGCTTTATCCGCTGGCCTGTATACCTCATTCAGTAATATAGCAAGATTATTTACCAGTGACCCTGTGGTCCTAATGGTTGTCAAATCTTGTTCATTGTTTGTATGTGCCAGTCAA-CCAATTAATGCTCTGGCATTCATATTTGATGGTCTGCATTATGGTGTCTCAGATTTTGATTATGTCGCTCAAGCTACGATTGCTGTTGGGATAATGTCATCATTAGTTTTGTTATATGCTCCATCTGTTTTTGGACTTGCTGGAGTTTGGGCTGGTTTGACAACACTTATGGGATTGCGCATGGCTTCGGGCATTCTCAGGCTTCTATGGAAATCAGGACCTTGGTCATTTTTGCATGAGGAACCCAAAACAGAGCTAGCTGGTTGAAGATGGAGCGGCAACTAAGCAGTCAATACTACGGATTAAATGAACGAGCGGGTGATTCTGTAGGTATTTATGTTCAAGTCGGTCTGCTAGGAGATGCCATTTTTACTTGCTACCAACATTGTTCAATTGCTAGTGTTATTACTATGTGTAGCCGTTTTATTTATTCTAAAGGCTCCCTTGTTTCTTGTGGTGGTTTTCGTTTACTGTGTAAGCCAGTTTGCTGCTGCGTAAACAGCTTGATAAGTTTAGAAGGATAGAGAATTTGCCTTTCTTTAACCTGAGACCACTTCGAATTATTTTTGGAGCAATGTATACTAATACTGTATTATTCAGTTCAAAGGGGCCCTACGTAGCATTGTCCTAAAAAAAAAAAAAAAAAGGA]

[+] EMBL AK066423             [TTTCTCCTTTCTCCCCTCGAGTCTGATCCTCCCACTACCAACGTCCACCGGCACCGCAACTTGCTGTCCTCTCCTGCCGGCTGGTCCAGCTCCATCTCTCTTCTTGCTCTGCCTCCCCCTTCAATTTAATTGATTCCTCCATCCAGATTTCGAGATCGAGATGAAGGCAGTGATGATGCACCACCATCACGCGGCACGCCCTGCGCGCTGTCCAAGGCCTATCTCTTCCTCCTCCTCCTCAGCCCTGTTGGGTAGCAGACCAACCAGAGTCTCCTCCCCATCAAACCTGCCAAAGTTGCTCATAAACCGGCGACACATCACCCCTCTTGCCACCAATGCTCCCCATGCTGTTGCTGAAGATGATGGCGCCATCTCTTTTGCTAATGCAACGCCAACGGAGCCTCCCATTGACTTGCGTCCCGGGGGTGTCAGAAATGAGCTAATTCTTCTAGCTCTACCAGCAGTTCTTGGCCAAGCTATTGATCCATTGGCGCAATTGATGGAGACTGCATATATTGGTAGATTAGGTATTATGGCGCTTGCCCTTCATAAAGTAGCTCTTGGGAGTGCTGAATTATAGCCATCCTTACTGCATGAAAGCAAGCTGTCCCTTCTTTTGCCATTCATCCTTCTTTTTCATATATTCTGAAGGGGCTCTGGAGCTAGCATCAGCTGGTATTGGTGTGTCGGTTTTTAATATCGTGTCTAAGATTTTCAACATTCCACTGTTGAGCATTGCAACCTCATTTGTGGCAGAAGACATTTCCAAGAATGCTAGCAAGCATTCAAGTTCAGGCAAATTGGAGCTGTCATCTGTATCTTCTGCATTGGTCTTAGCTGCTGGAATCGGTACAATTGAAGCATTGGCATTGTTCCTAGGATCAGGATTGTTTCTTAAACTAATGGGCGTGTCACCTGCCTCACCAATGCATAAACCTGCAAAACTTTTCCTTTCATTGAGAGCTTTGGGAGCACCTGCAAATGTGATTATGTTAGCAGTTCAGGGAATATTTCGTGGATTCAAGGATACTAAGACTCCTGTATTTTTTATAGGTTTGGGAAATCTTTCAGCTGTAGTGCTTCTTCCTTTACTTATTTACGTCTTTCGGCTTGGCATAACTGGAGCTGCAATTTCTACAGTTGCATCACAGTACATTATTACAATTTTGCTTCTCCAGTCTCTAAGTAAAAGAGCTGTTCTACTTCCTCCAAGGCTGGACCAGTTAGAGTTTAGCGGATATCTAAAATCTGGTGTCTTTTTCGTTCTTCTATCTCCCCCTCTCTCATTATATTCAATTGTTGTGCATGCTAAATCAGAGTTCTTACACTTTCATTGATCTCAGTGTCCGTTCATTTTGTTCATTCTACAATGTGCGGTTAACTGAAGTTCAGATTTTCTCTCCCAGGGGGCTTTGAGTTCTTTGGGTTAATTTGTCAAAATTTCCAATTCTGGATCCACTATGCATTTAACAATGATACCTTTATCGATAACAAGTTAATTGTAAAGTTTGGTTTTTGAAATAACTTTATATGCAAGAAAAAGGAAAGACTATCGTAGAGTAGATGGTGTAGGTACGGTTACTGCTAGTATATTTTACAGATATGTTGATCAGCTTGTCATTGATAGAGCTTTCATTCATGGGCCATGCCCATTCTGTCCACTAATGAATGGGCTGTTCAGGGAACTTCTATTCTCCATATTGTTTCGTGGTACCATTTATATGTAGTAAAATGTGCTCAATTCTAGGATTTGCAAATATTTGCTGTCATATTATTGGAAAGATAATGCATGTCTATGATATGCATCCTGAGAACCTCCATGTTATAATTTCATACTTCTTATCTTGTTTTTCCTTTTATTGCACTTACCACCATCTATAATTCCATCATCTGTTTTTGAAATGCTTAGGTGGCATGCTGTTAGGAAGAACCCTCTCGATTTTATTAACGATGACCATAGGGACATCAATGGCTGCTCGACAAGGCCCAACAGCTATGGCAGCTCATCAGATATGCTTACAAGTATGGCTTGCGGTATCTTTGCTTGCAGATGCTTTAGCTGTTTCTGCCCAGGCAATGATAGCAAGCTCCTATGCAATATTGGACTACAAGAGGGTCCAGAAGATAGCAATGTTTGCTTTGCAGGTCATGTGTCATTTCTCTGTTTTCTATTGTGAAGCTTTGTTTTTCATGTATTCATAGATGCAATCGCCCTTTCTTGTTAACATAGAAAAATGGAGATTTTCTTGCAGATAGGAGTAGTCAGTGGATTAGCTTTATCCGCTGGCCTGTATACCTCATTCAGTAATATAGCAAGATTATTTACCAGTGACCCTGTGGTCCTAATGGTTGTCAAATCTTGTTCATTGTTTGTATGTGCCAGTCAA CCAATTAATGCTCTGGCATTCATATTTGATGGTCTGCATTATGGTGTCTCAGATTTTGATTATGTCGCTCAAGCTACGATTGCTGTTGGGATAATGTCATCATTAGTTTTGTTATATGCTCCATCTGTTTTTGGACTTGCTGGAGTTTGGGCTGGTTTGACAACACTTATGGGATTGCGCATGGCTTCGGGCATTCTCAGGCTTCTATGGAAATCAGGACCTTGGTCATTTTTGCATGAGGAACCCAAAACAGAGCTAGCTGGTTGAAGATGGAGCGGCAACTAAGCAGTCAATACTACGGATTAAATGAACGAGCGGGTGATTCTGTAGGTATTTATGTTCAAGTCGGTCTGCTAGGAGATGCCATTTTTACTTGCTACCAACATTGTTCAATTGCTAGTGTTATTACTATGTGTAGCCGTTTTATTTATTCTAAAGGCTCCCTTGTTTCTTGTGGTGGTTTTCGTTTACTGTGTAAGCCAGTTTGCTGCTGCGTAAACAGCTTGATAAGTTTAGAAGGATAGAGAATTTGCCTTTCTTTAACCTGAGACCACTTCGAATTATTTTTGGAGCAATGTATACTAATACTGTAT                                                        ]
[+] EMBL CF311712             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGTT ATTCTACAATGTGCGGTTAACTGAAGTTCAGATTTTCTCTCCCAGGGGGCTTTGAGTTCTTTGGGTTAATTTGTCAAAATTTCCAATTCTGGATCCACTATGCATTTAACAATGATACCTTTATCGATAACAAGTTAATTGTAAAGTTTGGTTTTTGAAATAACTTTATATGCAAGAAAAAGGAAAGACTATCGTAGAGTAGATGGTGTAGGTACGGTTACTGCTAGTATATTTTACAGATATGTTGATCAGCTTGTCATTGATAGAGCTTTCATTCATGGGCCATGCCCATTCTGTCCACTAATGAATGGGCTGTTCAGGGAACTTCTATTCTCCATATTGTTTCGTGGTACCATTTATATGTAGTAAAATGTGCTCAATTCTAGGATTTGCAAATATTTGCTGTCATATTATTGGAAAGATAATGCATGTCTATGATATGCATCCTGAGAACCTCCATGTTATAATTTCATACTTCTTATCTTGTTTTTCCTTTTATTGCACTTACCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB671272             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AATATTTGCTGTCATATTATTGGAAAGATAATGCATGTCTATGATATGCATCCTGAGAACCTCCATGTTATAATTTCATACTTCTTATCTTGTTTTTCCTTTTATTGCACTTACCACCATCTATAATTCCATCATCTGTTTTTGAAATGCTTAGGTGGCATGCTGTTAGGAAGAACCCTCTCGATTTTATTAACGATGACCATAGGGACATCAATGGCTGCTCGACAAGGCCCAACAGCTATGGCAGCTCATCAGATATGCTTACAAGTATGGCTTGCGGTATCTTTGCTTGCAGATGCTTTAGCTGTTTCTGCCCAGGCAATGATAGCAAGCTCCTATGCAATATTGGACTACAAGAGGGTCCAGAAGATAGCAATGTTTGCTTTGCAGGTCATGTGTCATTTCTCTGTTTTCTATTGTGAAGCTTTGTTTTTCATGTATTCATAGATGCAATCGCCCTTTCTTGTTAACATAGAAAAATGGAGATTTTCTTGCAGATAGGAGTAGTCAGTGGATTAGCTTTATCCGCTGGCCTGTATACCTCATTCAGTAATATAGCAAGATTATTTACCAGTGACCCTGTGGTCCTAATGGTTGTCAAATCTTGTTCATTGTTTGTATGTGCCAGTCAA CCAATTAATGCTCTGGCATTCATATTTGATGGTCTGCATTATGGTGTCTCAGATTTTGATTATGTCGCTCAAGCTACGATTGCTGTTGGGATAATGTCATCATTAGTTTTGTTATATGCTCCATCTGTTTTTGGACTTGCTGGAGTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB684732             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TAGGAGTAGTCAGTGGATTAGCTTTATCCGCTGGCCTGTATACCTCATTCAGTAATATAGCAAGATTATTTACCAGTGACCCTGTGGTCCTAATGGTTGTCAAATCTTGTTCATTGTTTGTATGTGCCAGTCAA CCAATTAATGCTCTGGCATTCATATTTGATGGTCTGCATTATGGTGTCTCAGATTTTGATTATGTCGCTCAAGCTACGATTGCTGTTGGGATAATGTCATCATTAGTTTTGTTATATGCTCCATCTGTTTTTGGACTTGCTGGAGTTTGGGCTGGTTTGACAACACTTATGGGATTGCGCATGGCTTCGGGCATTCTCAGGCTTTTATGGAAATCAGGACCTTGGTCATTTTTGCATGAGGAACCCAAAACAGAGCTAGCTGGTTGAAGATGGAGCGGCAACTAAGCAGTCAATACTACGGATTAAATGAACGAGCGGGTGATTCTGTAGGTATTTATGTTCAAGTCGGTCTGCTAGGAGATGCCATTTTTACTTGCTACCAACATTGTTCAATTGCTAGTGTTATTACTATGTGTAGCCGTTTTATTTATTTTAAAGGCTCCCTTGTTTCTTGTGGTGGTTTTCGTTTACTGTGTAAGCCAGTTTGCTGCTGCGTAAACAGCTTGATAAGTTTAGAAGGATAGAGAATTTGCCTTTCTTTAACCTGAGACCACTTCGAATTATTTTTGGAGCAATGTATACTAATACTGTATTATTCAGTTCAAAGGGGCCCTACGTAGCATTGTCCTAAAAAAAAAAAAAAAAAGGA]
[-] EMBL CF328320             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAATCTTGTTCATTGTTTGTATGTGCCAGTCAACCCAATTAATGCTCTGGCATTCATATTTGATGGTCTGCATTATGGTGTCTCAGATTTTGATTATGTCGCTCAAGCTACGATTGCTGTTGGGATAATGTCATCATTAGTTTTGTTATATGCTCCATCTGTTTTTGGACTTGCTGGAGTTTGGGCTGGTTTGACAACACTTATGGGATTGCGCATGGCTTCGGGCATTCTCAGGCTTCTATGGAAATCAGGACCTTGGTCATTTTTGCATGAGGAACCCAAAACAGAGCTAGCTGGTTGAAGATGGAGCGGCAACTAAGCAGTCAATACTACGGATTAAATGAACGAGCGGGTGATTCTGTAGGTATTTATGTTCAAGTCGGTCTGCTAGGAGATGCCATTTTTACTTGCTACCAACATTGTTCAATTGCTAGTGTTATTACTATGTGTAGCCGTTTTATTTATTCTAAAGGCTCCCTTGTTTCTTGTGGTGGTTTTCGTTTACTGTGTAAGCCAGTTTGCTGCTGCGTAAACAGCTTGATAAGTTTAGAAGGATAGAGAATTTGCCTTTCTTTAACCTGAGACCACTTCGAATTATTTTTGGAGCAATGTATACTAATACTGTATTATTCAGTTCAAAaaaaa                                      ]




>consensus_11984#0
TTTCTCCTTTCTCCCCTCGAGTCTGATCCTCCCACTACCAACGTCCACCGGCACCGCAAC
TTGCTGTCCTCTCCTGCCGGCTGGTCCAGCTCCATCTCTCTTCTTGCTCTGCCTCCCCCT
TCAATTTAATTGATTCCTCCATCCAGATTTCGAGATCGAGATGAAGGCAGTGATGATGCA
CCACCATCACGCGGCACGCCCTGCGCGCTGTCCAAGGCCTATCTCTTCCTCCTCCTCCTC
AGCCCTGTTGGGTAGCAGACCAACCAGAGTCTCCTCCCCATCAAACCTGCCAAAGTTGCT
CATAAACCGGCGACACATCACCCCTCTTGCCACCAATGCTCCCCATGCTGTTGCTGAAGA
TGATGGCGCCATCTCTTTTGCTAATGCAACGCCAACGGAGCCTCCCATTGACTTGCGTCC
CGGGGGTGTCAGAAATGAGCTAATTCTTCTAGCTCTACCAGCAGTTCTTGGCCAAGCTAT
TGATCCATTGGCGCAATTGATGGAGACTGCATATATTGGTAGATTAGGTATTATGGCGCT
TGCCCTTCATAAAGTAGCTCTTGGGAGTGCTGAATTATAGCCATCCTTACTGCATGAAAG
CAAGCTGTCCCTTCTTTTGCCATTCATCCTTCTTTTTCATATATTCTGAAGGGGCTCTGG
AGCTAGCATCAGCTGGTATTGGTGTGTCGGTTTTTAATATCGTGTCTAAGATTTTCAACA
TTCCACTGTTGAGCATTGCAACCTCATTTGTGGCAGAAGACATTTCCAAGAATGCTAGCA
AGCATTCAAGTTCAGGCAAATTGGAGCTGTCATCTGTATCTTCTGCATTGGTCTTAGCTG
CTGGAATCGGTACAATTGAAGCATTGGCATTGTTCCTAGGATCAGGATTGTTTCTTAAAC
TAATGGGCGTGTCACCTGCCTCACCAATGCATAAACCTGCAAAACTTTTCCTTTCATTGA
GAGCTTTGGGAGCACCTGCAAATGTGATTATGTTAGCAGTTCAGGGAATATTTCGTGGAT
TCAAGGATACTAAGACTCCTGTATTTTTTATAGGTTTGGGAAATCTTTCAGCTGTAGTGC
TTCTTCCTTTACTTATTTACGTCTTTCGGCTTGGCATAACTGGAGCTGCAATTTCTACAG
TTGCATCACAGTACATTATTACAATTTTGCTTCTCCAGTCTCTAAGTAAAAGAGCTGTTC
TACTTCCTCCAAGGCTGGACCAGTTAGAGTTTAGCGGATATCTAAAATCTGGTGTCTTTT
TCGTTCTTCTATCTCCCCCTCTCTCATTATATTCAATTGTTGTGCATGCTAAATCAGAGT
TCTTACACTTTCATTGATCTCAGTGTCCGTTCATTTTGTTCATTCTACAATGTGCGGTTA
ACTGAAGTTCAGATTTTCTCTCCCAGGGGGCTTTGAGTTCTTTGGGTTAATTTGTCAAAA
TTTCCAATTCTGGATCCACTATGCATTTAACAATGATACCTTTATCGATAACAAGTTAAT
TGTAAAGTTTGGTTTTTGAAATAACTTTATATGCAAGAAAAAGGAAAGACTATCGTAGAG
TAGATGGTGTAGGTACGGTTACTGCTAGTATATTTTACAGATATGTTGATCAGCTTGTCA
TTGATAGAGCTTTCATTCATGGGCCATGCCCATTCTGTCCACTAATGAATGGGCTGTTCA
GGGAACTTCTATTCTCCATATTGTTTCGTGGTACCATTTATATGTAGTAAAATGTGCTCA
ATTCTAGGATTTGCAAATATTTGCTGTCATATTATTGGAAAGATAATGCATGTCTATGAT
ATGCATCCTGAGAACCTCCATGTTATAATTTCATACTTCTTATCTTGTTTTTCCTTTTAT
TGCACTTACCACCATCTATAATTCCATCATCTGTTTTTGAAATGCTTAGGTGGCATGCTG
TTAGGAAGAACCCTCTCGATTTTATTAACGATGACCATAGGGACATCAATGGCTGCTCGA
CAAGGCCCAACAGCTATGGCAGCTCATCAGATATGCTTACAAGTATGGCTTGCGGTATCT
TTGCTTGCAGATGCTTTAGCTGTTTCTGCCCAGGCAATGATAGCAAGCTCCTATGCAATA
TTGGACTACAAGAGGGTCCAGAAGATAGCAATGTTTGCTTTGCAGGTCATGTGTCATTTC
TCTGTTTTCTATTGTGAAGCTTTGTTTTTCATGTATTCATAGATGCAATCGCCCTTTCTT
GTTAACATAGAAAAATGGAGATTTTCTTGCAGATAGGAGTAGTCAGTGGATTAGCTTTAT
CCGCTGGCCTGTATACCTCATTCAGTAATATAGCAAGATTATTTACCAGTGACCCTGTGG
TCCTAATGGTTGTCAAATCTTGTTCATTGTTTGTATGTGCCAGTCAACCAATTAATGCTC
TGGCATTCATATTTGATGGTCTGCATTATGGTGTCTCAGATTTTGATTATGTCGCTCAAG
CTACGATTGCTGTTGGGATAATGTCATCATTAGTTTTGTTATATGCTCCATCTGTTTTTG
GACTTGCTGGAGTTTGGGCTGGTTTGACAACACTTATGGGATTGCGCATGGCTTCGGGCA
TTCTCAGGCTTCTATGGAAATCAGGACCTTGGTCATTTTTGCATGAGGAACCCAAAACAG
AGCTAGCTGGTTGAAGATGGAGCGGCAACTAAGCAGTCAATACTACGGATTAAATGAACG
AGCGGGTGATTCTGTAGGTATTTATGTTCAAGTCGGTCTGCTAGGAGATGCCATTTTTAC
TTGCTACCAACATTGTTCAATTGCTAGTGTTATTACTATGTGTAGCCGTTTTATTTATTC
TAAAGGCTCCCTTGTTTCTTGTGGTGGTTTTCGTTTACTGTGTAAGCCAGTTTGCTGCTG
CGTAAACAGCTTGATAAGTTTAGAAGGATAGAGAATTTGCCTTTCTTTAACCTGAGACCA
CTTCGAATTATTTTTGGAGCAATGTATACTAATACTGTATTATTCAGTTCAAAGGGGCCC
TACGTAGCATTGTCCTAAAAAAAAAAAAAAAAAGGA

consensusID : consensus_11984#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1777
fasta sequence 
                              [AGATGACCGTAGTGATGATGCACCACCATCACGCGGCACGCCCTGCGCGCTGTCCAAGGCCTATCTCTTCCTCCTCCTCCTCAGCCCTGTTGGGTAGCAGACCAACCAGAGTCTCCTCCCCATCAAACCTGCCAAAGTTGCTCATAAACCGGCGACACATCACCCCTCTTGCCACCAATGCTCCCCATGCTGTTGCTGAAGATGATGGCGCCATCTCTTTTGCTAATGCAACGCCAACGGAGCCTCCCATGGGCTCTGGAGCTAGCATCAGCTGGTATTGGTGTGTCGGTTTTTAATATCGTGTCTAAGATTTTCAACATTCCACTGTTGAGCATTGCAACCTCATTTGTGGCAGAAGACATTTCCAAGAATGCTAGCAAGCATTCAAGTTCAGGCAAATTGGAGCTGTCATCTGTATCTTCTGCATTGGTCTTAGCTGCTGGAATCGGTACAATTGAAGCATTGGCATTGTTCCTAGGATCAGGATTGTTTCTTAAACTAATGGGCGTGTCACCTGCCTCACCAATGCATAAACCTGCAAAACTTTTCCTTTCATTGAGAGCTTTGGGAGCACCTGCAAATGTGATT-ATGTTAG-CAG-TTCAG-GGAATATTTCG-TGGATTCAAGGATACTAAGACTCCTGTATTTTTTATAGGTTTGGGAAATCTTTCAGCTGTAGTGCTTCTTCCTTTACTTATTTACGTCTTTCGGCTTGGCATAACTGGAGCTGCAATTTCTACAGTTGCATCACAGTACATTATTACAATTTTGCTTCTCCAGTCTCTAAGTAAAAGAGCTGTTCTACTTCCTCCAAGGCTGGACCAGTTAGAGTTTAGCGGATATCTAAAATCTGGTGGCATGCTGTTAGGAAGAACCCTCTCGATTTTATTAACGATGACCATAGGGACATCAATGGCTGCTCGACAAGGCCCAACAGCTATGGCAGCTCATCAGATATGCTTACAAGTATGGCTTGCGGTATCTTTGCTTGCAGATGCTTTAGCTGTTTCTGCCCAGGCAATGATAGCAAGCTCCTATGCAATATTGGACTACAAGAGGGTCCAGAAGATAGCAATGTTTGCTTTGCAGATAGGAGTAGTCAGTGGATTAGCTTTATCCGCTGGCCTGTATACCTCATTCAGTAATATAGCAAGATTATTTACCAGTGACCCTGTGGTCCTAATGGTTGTCAAATCTTGTTCATTGTTTGTATGTGCCAGTCAACCAATTAATGCTCTGGCATTCATATTTGATGGTCTGCATTATGGTGTCTCAGATTTTGATTATGTCGCTCAAGCTACGATTGCTGTTGGGATAATGTCATCATTAGTTTTGTTATATGCTCCATCTGTTTTTGGACTTGCTGGAGTTTGGGCTGGTTTGACAACACTTATGGGATTGCGCATGGCTTCGGGCATTCTCAGGCTTTTATGGAAATCAGGACCTTGGTCATTTTTGCATGAGGAACCCAAAACAGAGCTAGCTGGTTGAAGATGGAGCGGCAACTAAGCAGTCAATACTACGGATTAAATGAACGAGCGGGTGATTCTGTAGGTATTTATGTTCAAGTCGGTCTGCTAGGAGATGCCATTTTTACTTGCTACCAACATTGTTCAATTGCTAGTGTTATTACTATGTGTAGCCGTTTTATTTATTCTAAAGGCTCCCTTGTTTCTTGTGGTGGTTTTCGTTTACTGTGTAAGCCAGTTTGCTGCTGCGTAAACAGCTTGATAAGTTTAGAAGGATAGAGAATTTGCCTTTCTTTAAAAAAAAAAAAGGA]

[+] EMBL CB674461             [AGATGACCGTAGTGATGATGCACCACCATCACGCGGCACGCCCTGCGCGCTGTCCAAGGCCTATCTCTTCCTCCTCCTCCTCAGCCCTGTTGGGTAGCAGACCAACCAGAGTCTCCTCCCCATCAAACCTGCCAAAGTTGCTCATAAACCGGCGACACATCACCCCTCTTGCCACCAATGCTCCCCATGCTGTTGCTGAAGATGATGGCGCCATCTCTTTTGCTAATGCAACGCCAACGGAGCCTCCCATGGGCTCTGGAGCTAGCATCAGCTGGTATTGGTGTGTCGGTTTTTAATATCGTGTCTAAGATTTTCAACATTCCACTGTTGAGCATTGCAACCTCATTTGTGGCAGAAGACATTTCCAAGAATGCTAGCAAGCATTCAAGTTCAGGCAAATTGGAGCTGTCATCTGTATCTTCTGCATTGGTCTTAGCTGCTGGAATCGGTACAATTGAAGCATTGGCATTGTTCCTAGGATCAGGATTGTTTCTTAAACTAATGGGCGTGTCACCTGCCTCACCAATGCATAAACCTGCAAAACTTTTCCTTTCATTGAGAGCTTTGGGAGCACCTGCAAATGTGATT ATGTTAG CAG TTCAG GGAATATTTCG TGGATTCAAGGATACTAAGACTCCTGTATTTTTTATAGGTTTGGGAAATCTTTCAGCTGTAGTGCTTCTTCCTTTACTTATTTACGTCTTTCGGCTTGGCATAACTGGAGCTGCAATTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB684731             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GATTCATGTTAGACAGATTCAGTGGAATATTTCGATGGATTCAAGGATACTAAGACTCCTGTATTTTTTATAGGTTTGGGAAATCTTTCAGCTGTAGTGCTTCTTCCTTTACTTATTTACGTCTTTCGGCTTGGCATAACTGGAGCTGCAATTTCTACAGTTGCATCACAGTACATTATTACAATTTTGCTTCTCCAGTCTCTAAGTAAAAGAGCTGTTCTACTTCCTCCAAGGCTGGACCAGTTAGAGTTTAGCGGATATCTAAAATCTGGTGGCATGCTGTTAGGAAGAACCCTCTCGATTTTATTAACGATGACCATAGGGACATCAATGGCTGCTCGACAAGGCCCAACAGCTATGGCAGCTCATCAGATATGCTTACAAGTATGGCTTGCGGTATCTTTGCTTGCAGATGCTTTAGCTGTTTCTGCCCAGGCAATGATAGCAAGCTCCTATGCAATATTGGACTACAAGAGGGTCCAGAAGATAGCAATGTTTGCTTTGCAGATAGGAGTAGTCAGTGGATTAGCTTTATCCGCTGGCCTGTATACCTCATTCAGTAATATAGCAAGATTATTTACCAGTGACCCTGTGGTCCTAATGGTTGTCAAATCTTGTTCATTGTTTGTATGTGCCAGTCAACCAATTAATGCTCTGGCATTCATATTTGATGGTCTGCATTATGGTGTCTCAGATTTTGATTATGTCGCTCAAGCTACGATTGCTGTTGGGATAATGTCATCATTAGTTTTGTTATATGCTCCATCTGTTTTTGGACTTGCTGGAGTTTGGGCTGGTTT                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB674462             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTACAAGTATGGCTTGCGGTATCTTTGCTTGCAGATGCTTTAGCTGTTTCTGCCCAGGCAATGATAGCAAGCTCCTATGCAATATTGGACTACAAGAGGGTCCAGAAGATAGCAATGTTTGCTTTGCAGATAGGAGTAGTCAGTGGATTAGCTTTATCCGCTGGCCTGTATACCTCATTCAGTAATATAGCAAGATTATTTACCAGTGACCCTGTGGTCCTAATGGTTGTCAAATCTTGTTCATTGTTTGTATGTGCCAGTCAACCAATTAATGCTCTGGCATTCATATTTGATGGTCTGCATTATGGTGTCTCAGATTTTGATTATGTCGCTCAAGCTACGATTGCTGTTGGGATAATGTCATCATTAGTTTTGTTATATGCTCCATCTGTTTTTGGACTTGCTGGAGTTTGGGCTGGTTTGACAACACTTATGGGATTGCGCATGGCTTCGGGCATTCTCAGGCTTTTATGGAAATCAGGACCTTGGTCATTTTTGCATGAGGAACCCAAAACAGAGCTAGCTGGTTGAAGATGGAGCGGCAACTAAGCAGTCAATACTACGGATTAAATGAACGAGCGGGTGATTCTGTAGGTATTTATGTTCAAGTCGGTCTGCTAGGAGATGCCATTTTTACTTGCTACCAACATTGTTCAATTGCTAGTGTTATTACTATGTGTAGCCGTTTTATTTATTCTAAAGGCTCCCTTGTTTCTTGTGGTGGTTTTCGTTTACTGTGTAAGCCAGTTTGCTGCTGCGTAAACAGCTTGATAAGTTTAGAAGGATAGAGAATTTGCCTTTCTTTAAAAAAAAAAAAGGA]




>consensus_11984#1
AGATGACCGTAGTGATGATGCACCACCATCACGCGGCACGCCCTGCGCGCTGTCCAAGGC
CTATCTCTTCCTCCTCCTCCTCAGCCCTGTTGGGTAGCAGACCAACCAGAGTCTCCTCCC
CATCAAACCTGCCAAAGTTGCTCATAAACCGGCGACACATCACCCCTCTTGCCACCAATG
CTCCCCATGCTGTTGCTGAAGATGATGGCGCCATCTCTTTTGCTAATGCAACGCCAACGG
AGCCTCCCATGGGCTCTGGAGCTAGCATCAGCTGGTATTGGTGTGTCGGTTTTTAATATC
GTGTCTAAGATTTTCAACATTCCACTGTTGAGCATTGCAACCTCATTTGTGGCAGAAGAC
ATTTCCAAGAATGCTAGCAAGCATTCAAGTTCAGGCAAATTGGAGCTGTCATCTGTATCT
TCTGCATTGGTCTTAGCTGCTGGAATCGGTACAATTGAAGCATTGGCATTGTTCCTAGGA
TCAGGATTGTTTCTTAAACTAATGGGCGTGTCACCTGCCTCACCAATGCATAAACCTGCA
AAACTTTTCCTTTCATTGAGAGCTTTGGGAGCACCTGCAAATGTGATTATGTTAGCAGTT
CAGGGAATATTTCGTGGATTCAAGGATACTAAGACTCCTGTATTTTTTATAGGTTTGGGA
AATCTTTCAGCTGTAGTGCTTCTTCCTTTACTTATTTACGTCTTTCGGCTTGGCATAACT
GGAGCTGCAATTTCTACAGTTGCATCACAGTACATTATTACAATTTTGCTTCTCCAGTCT
CTAAGTAAAAGAGCTGTTCTACTTCCTCCAAGGCTGGACCAGTTAGAGTTTAGCGGATAT
CTAAAATCTGGTGGCATGCTGTTAGGAAGAACCCTCTCGATTTTATTAACGATGACCATA
GGGACATCAATGGCTGCTCGACAAGGCCCAACAGCTATGGCAGCTCATCAGATATGCTTA
CAAGTATGGCTTGCGGTATCTTTGCTTGCAGATGCTTTAGCTGTTTCTGCCCAGGCAATG
ATAGCAAGCTCCTATGCAATATTGGACTACAAGAGGGTCCAGAAGATAGCAATGTTTGCT
TTGCAGATAGGAGTAGTCAGTGGATTAGCTTTATCCGCTGGCCTGTATACCTCATTCAGT
AATATAGCAAGATTATTTACCAGTGACCCTGTGGTCCTAATGGTTGTCAAATCTTGTTCA
TTGTTTGTATGTGCCAGTCAACCAATTAATGCTCTGGCATTCATATTTGATGGTCTGCAT
TATGGTGTCTCAGATTTTGATTATGTCGCTCAAGCTACGATTGCTGTTGGGATAATGTCA
TCATTAGTTTTGTTATATGCTCCATCTGTTTTTGGACTTGCTGGAGTTTGGGCTGGTTTG
ACAACACTTATGGGATTGCGCATGGCTTCGGGCATTCTCAGGCTTTTATGGAAATCAGGA
CCTTGGTCATTTTTGCATGAGGAACCCAAAACAGAGCTAGCTGGTTGAAGATGGAGCGGC
AACTAAGCAGTCAATACTACGGATTAAATGAACGAGCGGGTGATTCTGTAGGTATTTATG
TTCAAGTCGGTCTGCTAGGAGATGCCATTTTTACTTGCTACCAACATTGTTCAATTGCTA
GTGTTATTACTATGTGTAGCCGTTTTATTTATTCTAAAGGCTCCCTTGTTTCTTGTGGTG
GTTTTCGTTTACTGTGTAAGCCAGTTTGCTGCTGCGTAAACAGCTTGATAAGTTTAGAAG
GATAGAGAATTTGCCTTTCTTTAAAAAAAAAAAAGGA

consensusID : consensus_11984#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 598
fasta sequence 
                              [ATTTGAGGTATATCCACGCCCTGGGCAGTATATTGTATAAGGGTATTTTCCCAATTTTCATCCCTTTTATGAAAATAACAATTGGGGAAAAAGAAATTTTAAAATAAAGTCGGTTTCCCCTTTGGAGCCCTGTATTTCAAGTTTTGTAAATGATTTAAAGGAGGCTCTTTTAGGCTTTTATTTTAAAAATTTGAGAAATCGCAGGGTTTTATGGAAATCAGGCCCTTGGTCATTTTTGCATGGGGAACCCAAAACAGAGCTAATTGGTTGAAGATGGAGGGGCAAATAAGCAGTCAATATTTCGGATTAAATGAACGAGGGGGGGATTTTGTAGGTATTTATGTTCAAATCGGTTTGTTAGGAGAAGCCATTTTTTTTTGGTACCAACATTGTTCAATTGGTAGGGTTATTTTTATGGGTAGCCGTTTTATTTATTTTAAAGGCTCCCCTGTTTTTTGGGGGGGTTTTTGTTTACTGGGTAAACCAGTTTGGTGGTGGGTAAACAGCTTGATAAGTTTAGAAGGATAGAGAATTTCCCTTTTTTTAACCGGGGACCCCTTTGAATTTTTTTTGGGGCAAAGTATATTAATACTGTATT]

[-] EMBL CB671273             [ATTTGAGGTATATCCACGCCCTGGGCAGTATATTGTATAAGGGTATTTTCCCAATTTTCATCCCTTTTATGAAAATAACAATTGGGGAAAAAGAAATTTTAAAATAAAGTCGGTTTCCCCTTTGGAGCCCTGTATTTCAAGTTTTGTAAATGATTTAAAGGAGGCTCTTTTAGGCTTTTATTTTAAAAATTTGAGAAATCGCAGGGTTTTATGGAAATCAGGCCCTTGGTCATTTTTGCATGGGGAACCCAAAACAGAGCTAATTGGTTGAAGATGGAGGGGCAAATAAGCAGTCAATATTTCGGATTAAATGAACGAGGGGGGGATTTTGTAGGTATTTATGTTCAAATCGGTTTGTTAGGAGAAGCCATTTTTTTTTGGTACCAACATTGTTCAATTGGTAGGGTTATTTTTATGGGTAGCCGTTTTATTTATTTTAAAGGCTCCCCTGTTTTTTGGGGGGGTTTTTGTTTACTGGGTAAACCAGTTTGGTGGTGGGTAAACAGCTTGATAAGTTTAGAAGGATAGAGAATTTCCCTTTTTTTAACCGGGGACCCCTTTGAATTTTTTTTGGGGCAAAGTATATTAATACTGTATT]




>consensus_11984#2
ATTTGAGGTATATCCACGCCCTGGGCAGTATATTGTATAAGGGTATTTTCCCAATTTTCA
TCCCTTTTATGAAAATAACAATTGGGGAAAAAGAAATTTTAAAATAAAGTCGGTTTCCCC
TTTGGAGCCCTGTATTTCAAGTTTTGTAAATGATTTAAAGGAGGCTCTTTTAGGCTTTTA
TTTTAAAAATTTGAGAAATCGCAGGGTTTTATGGAAATCAGGCCCTTGGTCATTTTTGCA
TGGGGAACCCAAAACAGAGCTAATTGGTTGAAGATGGAGGGGCAAATAAGCAGTCAATAT
TTCGGATTAAATGAACGAGGGGGGGATTTTGTAGGTATTTATGTTCAAATCGGTTTGTTA
GGAGAAGCCATTTTTTTTTGGTACCAACATTGTTCAATTGGTAGGGTTATTTTTATGGGT
AGCCGTTTTATTTATTTTAAAGGCTCCCCTGTTTTTTGGGGGGGTTTTTGTTTACTGGGT
AAACCAGTTTGGTGGTGGGTAAACAGCTTGATAAGTTTAGAAGGATAGAGAATTTCCCTT
TTTTTAACCGGGGACCCCTTTGAATTTTTTTTGGGGCAAAGTATATTAATACTGTATT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11984#0      TTTCTCCTTTCTCCCCTCGAGTCTGATCCTCCCACTACCAACGTCCACCGGCACCGCAAC 60
consensus_11984#1      ------------------------------------------------------------
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TTGCTGTCCTCTCCTGCCGGCTGGTCCAGCTCCATCTCTCTTCTTGCTCTGCCTCCCCCT 120
consensus_11984#1      ------------------------------------------------------------
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TCAATTTAATTGATTCCTCCATCCAGATTTCGAGATCGAGATGAAGGCAGTGATGATGCA 180
consensus_11984#1      --------------------------------------AGATGACCGTAGTGATGATGCA 22
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      CCACCATCACGCGGCACGCCCTGCGCGCTGTCCAAGGCCTATCTCTTCCTCCTCCTCCTC 240
consensus_11984#1      CCACCATCACGCGGCACGCCCTGCGCGCTGTCCAAGGCCTATCTCTTCCTCCTCCTCCTC 82
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      AGCCCTGTTGGGTAGCAGACCAACCAGAGTCTCCTCCCCATCAAACCTGCCAAAGTTGCT 300
consensus_11984#1      AGCCCTGTTGGGTAGCAGACCAACCAGAGTCTCCTCCCCATCAAACCTGCCAAAGTTGCT 142
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      CATAAACCGGCGACACATCACCCCTCTTGCCACCAATGCTCCCCATGCTGTTGCTGAAGA 360
consensus_11984#1      CATAAACCGGCGACACATCACCCCTCTTGCCACCAATGCTCCCCATGCTGTTGCTGAAGA 202
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TGATGGCGCCATCTCTTTTGCTAATGCAACGCCAACGGAGCCTCCCATTGACTTGCGTCC 420
consensus_11984#1      TGATGGCGCCATCTCTTTTGCTAATGCAACGCCAACGGAGCCTCCCAT------------ 250
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      CGGGGGTGTCAGAAATGAGCTAATTCTTCTAGCTCTACCAGCAGTTCTTGGCCAAGCTAT 480
consensus_11984#1      ------------------------------------------------------------
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TGATCCATTGGCGCAATTGATGGAGACTGCATATATTGGTAGATTAGGTATTATGGCGCT 540
consensus_11984#1      ------------------------------------------------------------
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TGCCCTTCATAAAGTAGCTCTTGGGAGTGCTGAATTATAGCCATCCTTACTGCATGAAAG 600
consensus_11984#1      ------------------------------------------------------------
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      CAAGCTGTCCCTTCTTTTGCCATTCATCCTTCTTTTTCATATATTCTGAAGGGGCTCTGG 660
consensus_11984#1      ---------------------------------------------------GGGCTCTGG 259
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      AGCTAGCATCAGCTGGTATTGGTGTGTCGGTTTTTAATATCGTGTCTAAGATTTTCAACA 720
consensus_11984#1      AGCTAGCATCAGCTGGTATTGGTGTGTCGGTTTTTAATATCGTGTCTAAGATTTTCAACA 319
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TTCCACTGTTGAGCATTGCAACCTCATTTGTGGCAGAAGACATTTCCAAGAATGCTAGCA 780
consensus_11984#1      TTCCACTGTTGAGCATTGCAACCTCATTTGTGGCAGAAGACATTTCCAAGAATGCTAGCA 379
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      AGCATTCAAGTTCAGGCAAATTGGAGCTGTCATCTGTATCTTCTGCATTGGTCTTAGCTG 840
consensus_11984#1      AGCATTCAAGTTCAGGCAAATTGGAGCTGTCATCTGTATCTTCTGCATTGGTCTTAGCTG 439
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      CTGGAATCGGTACAATTGAAGCATTGGCATTGTTCCTAGGATCAGGATTGTTTCTTAAAC 900
consensus_11984#1      CTGGAATCGGTACAATTGAAGCATTGGCATTGTTCCTAGGATCAGGATTGTTTCTTAAAC 499
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TAATGGGCGTGTCACCTGCCTCACCAATGCATAAACCTGCAAAACTTTTCCTTTCATTGA 960
consensus_11984#1      TAATGGGCGTGTCACCTGCCTCACCAATGCATAAACCTGCAAAACTTTTCCTTTCATTGA 559
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      GAGCTTTGGGAGCACCTGCAAATGTGATTATGTTAGCAGTTCAGGGAATATTTCGTGGAT 1020
consensus_11984#1      GAGCTTTGGGAGCACCTGCAAATGTGATTATGTTAGCAGTTCAGGGAATATTTCGTGGAT 619
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TCAAGGATACTAAGACTCCTGTATTTTTTATAGGTTTGGGAAATCTTTCAGCTGTAGTGC 1080
consensus_11984#1      TCAAGGATACTAAGACTCCTGTATTTTTTATAGGTTTGGGAAATCTTTCAGCTGTAGTGC 679
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TTCTTCCTTTACTTATTTACGTCTTTCGGCTTGGCATAACTGGAGCTGCAATTTCTACAG 1140
consensus_11984#1      TTCTTCCTTTACTTATTTACGTCTTTCGGCTTGGCATAACTGGAGCTGCAATTTCTACAG 739
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TTGCATCACAGTACATTATTACAATTTTGCTTCTCCAGTCTCTAAGTAAAAGAGCTGTTC 1200
consensus_11984#1      TTGCATCACAGTACATTATTACAATTTTGCTTCTCCAGTCTCTAAGTAAAAGAGCTGTTC 799
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TACTTCCTCCAAGGCTGGACCAGTTAGAGTTTAGCGGATATCTAAAATCTGGTGTCTTTT 1260
consensus_11984#1      TACTTCCTCCAAGGCTGGACCAGTTAGAGTTTAGCGGATATCTAAAATCTGGTG------ 853
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TCGTTCTTCTATCTCCCCCTCTCTCATTATATTCAATTGTTGTGCATGCTAAATCAGAGT 1320
consensus_11984#1      ------------------------------------------------------------
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TCTTACACTTTCATTGATCTCAGTGTCCGTTCATTTTGTTCATTCTACAATGTGCGGTTA 1380
consensus_11984#1      ------------------------------------------------------------
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      ACTGAAGTTCAGATTTTCTCTCCCAGGGGGCTTTGAGTTCTTTGGGTTAATTTGTCAAAA 1440
consensus_11984#1      ------------------------------------------------------------
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TTTCCAATTCTGGATCCACTATGCATTTAACAATGATACCTTTATCGATAACAAGTTAAT 1500
consensus_11984#1      ------------------------------------------------------------
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TGTAAAGTTTGGTTTTTGAAATAACTTTATATGCAAGAAAAAGGAAAGACTATCGTAGAG 1560
consensus_11984#1      ------------------------------------------------------------
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TAGATGGTGTAGGTACGGTTACTGCTAGTATATTTTACAGATATGTTGATCAGCTTGTCA 1620
consensus_11984#1      ------------------------------------------------------------
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TTGATAGAGCTTTCATTCATGGGCCATGCCCATTCTGTCCACTAATGAATGGGCTGTTCA 1680
consensus_11984#1      ------------------------------------------------------------
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      GGGAACTTCTATTCTCCATATTGTTTCGTGGTACCATTTATATGTAGTAAAATGTGCTCA 1740
consensus_11984#1      ------------------------------------------------------------
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      ATTCTAGGATTTGCAAATATTTGCTGTCATATTATTGGAAAGATAATGCATGTCTATGAT 1800
consensus_11984#1      ------------------------------------------------------------
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      ATGCATCCTGAGAACCTCCATGTTATAATTTCATACTTCTTATCTTGTTTTTCCTTTTAT 1860
consensus_11984#1      ------------------------------------------------------------
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TGCACTTACCACCATCTATAATTCCATCATCTGTTTTTGAAATGCTTAGGTGGCATGCTG 1920
consensus_11984#1      ----------------------------------------------------GCATGCTG 861
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TTAGGAAGAACCCTCTCGATTTTATTAACGATGACCATAGGGACATCAATGGCTGCTCGA 1980
consensus_11984#1      TTAGGAAGAACCCTCTCGATTTTATTAACGATGACCATAGGGACATCAATGGCTGCTCGA 921
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      CAAGGCCCAACAGCTATGGCAGCTCATCAGATATGCTTACAAGTATGGCTTGCGGTATCT 2040
consensus_11984#1      CAAGGCCCAACAGCTATGGCAGCTCATCAGATATGCTTACAAGTATGGCTTGCGGTATCT 981
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TTGCTTGCAGATGCTTTAGCTGTTTCTGCCCAGGCAATGATAGCAAGCTCCTATGCAATA 2100
consensus_11984#1      TTGCTTGCAGATGCTTTAGCTGTTTCTGCCCAGGCAATGATAGCAAGCTCCTATGCAATA 1041
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TTGGACTACAAGAGGGTCCAGAAGATAGCAATGTTTGCTTTGCAGGTCATGTGTCATTTC 2160
consensus_11984#1      TTGGACTACAAGAGGGTCCAGAAGATAGCAATGTTTGCTTTGCAG--------------- 1086
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TCTGTTTTCTATTGTGAAGCTTTGTTTTTCATGTATTCATAGATGCAATCGCCCTTTCTT 2220
consensus_11984#1      ------------------------------------------------------------
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      GTTAACATAGAAAAATGGAGATTTTCTTGCAGATAGGAGTAGTCAGTGGATTAGCTTTAT 2280
consensus_11984#1      --------------------------------ATAGGAGTAGTCAGTGGATTAGCTTTAT 1114
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      CCGCTGGCCTGTATACCTCATTCAGTAATATAGCAAGATTATTTACCAGTGACCCTGTGG 2340
consensus_11984#1      CCGCTGGCCTGTATACCTCATTCAGTAATATAGCAAGATTATTTACCAGTGACCCTGTGG 1174
consensus_11984#2      ------------------------------------------------------------
                                                                                   

consensus_11984#0      TCCTAATGGTTGTCAAATCTTGTTCATTGTTTGTATGTGCCAGTCAACCAATTAATGCTC 2400
consensus_11984#1      TCCTAATGGTTGTCAAATCTTGTTCATTGTTTGTATGTGCCAGTCAACCAATTAATGCTC 1234
consensus_11984#2      ----------------------------------ATTTGAGGTATATCCACGCCCTGGGC 26
                                                         ** **      * ***     **  *

consensus_11984#0      TGGCATTCATATTTGATGGTCTGCATTATGGTGTCTCAGATTTTGATTATGTCGCTCAAG 2460
consensus_11984#1      TGGCATTCATATTTGATGGTCTGCATTATGGTGTCTCAGATTTTGATTATGTCGCTCAAG 1294
consensus_11984#2      AGTATATTGTATAAGGGTATTTTCCCAATTTTCATCCCTTTTATGAAAATAACAATTGGG 86
                        *    *  ***  *    * * *   **  *    *   ** ***  **  *  *   *

consensus_11984#0      CTACGATTGCTGTTGGGATAATGTCATCATTAGTTTTGTTATATGCTCCATCTGTTTTTG 2520
consensus_11984#1      CTACGATTGCTGTTGGGATAATGTCATCATTAGTTTTGTTATATGCTCCATCTGTTTTTG 1354
consensus_11984#2      GAAAAAGAAATTTTAAAATAAAGTCGGTTTCCCCTTTGGAGCCCTGTATTTCAAGTTTTG 146
                         *  *    * **   **** ***    *    ****        *   **   *****

consensus_11984#0      GACTTGCTGGAGTTTGGGCTGGTTTGACAACACTTATGGGATTGCGCATGGCTTCGGGCA 2580
consensus_11984#1      GACTTGCTGGAGTTTGGGCTGGTTTGACAACACTTATGGGATTGCGCATGGCTTCGGGCA 1414
consensus_11984#2      TAAATGATTTAAAGGAGGCTCTTTTA--GGCTTTTAT-------TTTAAAAATTTGAGAA 197
                        *  ** *  *     ****  ***     *  ****          *    ** * * *

consensus_11984#0      TTCTCAGGCTTCTATGGAAATCAGGACCTTGGTCATTTTTGCATGAGGAACCCAAAACAG 2640
consensus_11984#1      TTCTCAGGCTTTTATGGAAATCAGGACCTTGGTCATTTTTGCATGAGGAACCCAAAACAG 1474
consensus_11984#2      ATCGCAGGGTTTTATGGAAATCAGGCCCTTGGTCATTTTTGCATGGGGAACCCAAAACAG 257
                        ** **** ** ************* ******************* **************

consensus_11984#0      AGCTAGCTGGTTGAAGATGGAGCGGCAACTAAGCAGTCAATACTACGGATTAAATGAACG 2700
consensus_11984#1      AGCTAGCTGGTTGAAGATGGAGCGGCAACTAAGCAGTCAATACTACGGATTAAATGAACG 1534
consensus_11984#2      AGCTAATTGGTTGAAGATGGAGGGGCAAATAAGCAGTCAATATTTCGGATTAAATGAACG 317
                       *****  *************** ***** ************* * ***************

consensus_11984#0      AGCGGGTGATTCTGTAGGTATTTATGTTCAAGTCGGTCTGCTAGGAGATGCCATTTTTAC 2760
consensus_11984#1      AGCGGGTGATTCTGTAGGTATTTATGTTCAAGTCGGTCTGCTAGGAGATGCCATTTTTAC 1594
consensus_11984#2      AGGGGGGGATTTTGTAGGTATTTATGTTCAAATCGGTTTGTTAGGAGAAGCCATTTTTTT 377
                       ** *** **** ******************* ***** ** ******* *********  

consensus_11984#0      TTGCTACCAACATTGTTCAATTGCTAGTGTTATTACTATGTGTAGCCGTTTTATTTATTC 2820
consensus_11984#1      TTGCTACCAACATTGTTCAATTGCTAGTGTTATTACTATGTGTAGCCGTTTTATTTATTC 1654
consensus_11984#2      TTGGTACCAACATTGTTCAATTGGTAGGGTTATTTTTATGGGTAGCCGTTTTATTTATTT 437
                       *** ******************* *** ******  **** ****************** 

consensus_11984#0      TAAAGGCTCCCTTGTTTCTTGTGGTGGTTTTCGTTTACTGTGTAAGCCAGTTTGCTGCTG 2880
consensus_11984#1      TAAAGGCTCCCTTGTTTCTTGTGGTGGTTTTCGTTTACTGTGTAAGCCAGTTTGCTGCTG 1714
consensus_11984#2      TAAAGGCTCCCCTGTTTTTTGGGGGGGTTTTTGTTTACTGGGTAAACCAGTTTGGTGGTG 497
                       *********** ***** *** ** ****** ******** **** ******** ** **

consensus_11984#0      CGTAAACAGCTTGATAAGTTTAGAAGGATAGAGAATTTGCCTTTCTTTAACCTGAGACCA 2940
consensus_11984#1      CGTAAACAGCTTGATAAGTTTAGAAGGATAGAGAATTTGCCTTTCTTTAAAAAAAAAAAA 1774
consensus_11984#2      GGTAAACAGCTTGATAAGTTTAGAAGGATAGAGAATTTCCCTTTTTTTAACCGGGGACCC 557
                        ************************************* ***** *****      *   

consensus_11984#0      CTTCGAATTATTTTTGGAGCAATGTATACTAATACTGTATTATTCAGTTCAAAGGGGCCC 3000
consensus_11984#1      GGA--------------------------------------------------------- 1777
consensus_11984#2      CTTTGAATTTTTTTTGGGGCAAAGTATATTAATACTGTATT------------------- 598
                                                                                   

consensus_11984#0      TACGTAGCATTGTCCTAAAAAAAAAAAAAAAAAGGA 3036
consensus_11984#1      ------------------------------------
consensus_11984#2      ------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)