cluster # 11989

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Oryza sativa
cluster # 11989 cluster # 11989 Sequences # 9 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11989#0 length = 2939 sequences # 3
consensus_11989#1 length = 867 sequences # 4

consensus_11989#2 length = 772 sequences # 1
consensus_11989#3 length = 303 sequences # 1

consensusID : consensus_11989#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2939
fasta sequence

                              [CGCATCGCATCGCACCACAAACCCTCCCCCCCGACCAGAAAGCCAAGAAAGAAACCTTTCTTCGTCGGTCTCTCTCTCTCTCTGCCCATGGACTTCTCGGAGCAGGACGTCGAAATCTTCGGCGAGGACTACGACGACGCCGAGGCCGACGGCGGCGGCGGCGGCGGTGCCTCGTCCGGCTCCTCCTCCCCGTCCTCATCCTCCTCGTCGTCCGCCGCCGGGTCCTCCTCCTCCTCCAGCGGCGCCTCCAGCAGCAGCGGCGGGGGCGGGGGTGGGGGCGAGGACGAGGACGGGGTCGACCAGGGGGACGCCAGGGGGTACGACGACGACCCGTTCGACGGCGCGCCCGCGAGGGCCGCCGGTGGGTACGGTGACGAGGAGAGGGGCGAGGGTGATGCGGAGGAGGAGGAGGAGGAGGAGGAGAGGGATTTGTTCGGCTCTGACAACGAGGATTACGTCAAGACCCCCGCGCGTAGCAACTACCTAGTCCCAGTGCTACCCTCAATACGGAACACCAACAATCATTCTCGGGGAGGATATGGGGGGCGGAATGGCAGAGGTCCACCTCTTCTTCCAAGGCCAGGAGGCCATCCAGGACGGCATAACTTTGGATATGGTGGGAGGTTTTCGCATGGAAATGGGCGTAATGTTGAAGGTTTTGTTTCAGAAATGAAGCTTAATAAGAGTGAAGAAACTTTATCTAGGAAGTTTGTTGCTTTTCAGGAGCCTTCTGAGATTGCATGCTACAGCCGTATTGAGGGTGGGGATGTATATTTTGATGACCGCAGCTTGAGGCTCTTCAAACGTAACATTTGCGACTATGTTGGTGAAAATCTCAATAAAGGATTTGAATCTTTTATAGAGAAAAGAGATTTGGGTTCAGAAGGATTTGGTGATCTTCTTGCATGCATAAGAAATTCAACTGTACCTCTTCAGAACATACATTTTGTGACATACCGCAACAATCTTAACAAGATATTGGCCACGGCTTATCTAAGAGAACCATGGAAGATGGGTGTGCACAAAAGAAATGGTGTTGTATACCTGGACGTCCATAAGCTCCCCGAAAGACCACAAAGTGAGGTTGAACGCCGGAGATGTTATTGGGGATATTCTTTTGAAAATCTTGCAACTGAGAATTCCATTGATGAGGATGGAAGAGGTATTGATGCAAATGTAGAGTTCTGTGCTGTAATAAAAACGAAATTGGGTGCACATCGTATTATCATGGGTGCTGAGATGGACTGCTGTGACGCAACTGATGATGGTAGGCGGTTCTACGTGGAGTTGAAAACAAGCAGAGAGCTGGAGTACCATACAGTGGAAAAATTTGAGAAAGAGAAGTTGCTTCGATTCTGGATTCAATCATTTATTGCTGGTGTTCCATATGTTGTTGTTGGATTCAGGTAGTATTCATTCTTTATTGTTTTCCCTTACGCCATCCATTTTTTGTAGTCAATGTGATGAGCTTTCTATCACCTGACAGCTGGCATTTTTGCAATGGAAAATGATTTTCGTGATAAAATGTTTGCTGATACAATTTACATGTTAAAGAAGCTGTGCAATGTTAGTATTGGGCCTTCTGCTTGGCTAGGAGATTGACATGCTGGTTATCACAAATCAGTATGCCACTATGGTTGTCCTCTACAAGGAACAAGAGTAATTTCATTTACACCTGGTGTCATCAACTGTGTACGAAGCAAGCTCATATTTGTGATAGTCAGTCGTTTCTCATGGATGTCCTGTTGCAATAAATAATTGTGCTGCCTACCCAACTTTTGTGGGGCTAAAGGCTGCTGGTGCTATTACAATAAATATTTTATTATTTGGTACTAAGGTATATTTTTCCCGGTACGTGTATGCTCATTTTCGAGTTAATTTTGTCTAAATAATTACAACACGATTTCATCTTCGGGATACCAAATCTTTGTGTAGTAAACTAGAGGTTCATGGAGACATGGACTATTTCTGGTAATATACTGATATGTCTCCATTTATTGATTGTAATAGGCATAATAACTTAAACACATACTTGATTTTCTAGATTCTTCAGTTCAATTTGTTTGACTGCATCACATGTACTTGATAAAATCGTATGCTTATTTTTAATACAATGTTCTGATTTGGTGTGGTATTTTGCTCAATATTTAACCTACCCCATATGATGCAAAAGAAGGCTTTTACTTTTTTAACTTCGACTTTGTCCCAATTTTACATTGATTCCAGTGGCTTGTATTTGTAACTTGAACTAGTACCCCTCAGCATTTTCCTACTAATAAAGGAGTTTCAACCATATATTTTTTTTACCTGCAGGAATGATGCTGGTGTACTTATACGGACTGAGAGACTAAGAACCAAAGAAATAACACAAAAGGTGAAAGCGAAGAACTACTGGCAGGGAGGTGTTTGCTTGGCCTTCGCTGATGAGGTCTTATGCTGGTTGTATGGCACTGTTAGAGAAAACGAGGACTACATCCTGCAATTTGTACATCCATTCAATCGCTTGGAACTTCTACGTGCCCAGTCTCCCTGTCCTGATGCCATCACTCATCATGTGGAGCAGCTCTCTGGTACAGCAGGCTAGGTTAATTCGTACACACAACTTCGGCAAGTAAAAGGGCTGTTTGAGGTAGATCCGTGTTGAAGGATTCTATTCTAGGGGTGCTGACTCTTAAACAAAACTTCGGCAATTATATAATGGTTGAGCTGACGACTTACCCAGCCAAGCAACATAGGCCGACGACTAAATGGTTTGCTCTTTGAACTGCCAAAGAGATTTTGAAATTGTCAAAACCTTGTGTTTCTCCAGTAACATTAAGTTATAAATTAGGGAAATGGAGAGCTATGCGGCAATGCTACTACTGGGTCATGCCACCGAGGCACCAATGATGTAACTCTCTACCAGATACCAGTACCAAGGGAAATGATATGAATTCTAG]

[+] EMBL AK099734             [CGCATCGCATCGCACCACAAACCCTCCCCCCCGACCAGAAAGCCAAGAAAGAAACCTTTCTTCGTCGGTCTCTCTCTCTCTCTGCCCATGGACTTCTCGGAGCAGGACGTCGAAATCTTCGGCGAGGACTACGACGACGCCGAGGCCGACGGCGGCGGCGGCGGCGGTGCCTCGTCCGGCTCCTCCTCCCCGTCCTCATCCTCCTCGTCGTCCGCCGCCGGGTCCTCCTCCTCCTCCAGCGGCGCCTCCAGCAGCAGCGGCGGGGGCGGGGGTGGGGGCGAGGACGAGGACGGGGTCGACCAGGGGGACGCCAGGGGGTACGACGACGACCCGTTCGACGGCGCGCCCGCGAGGGCCGCCGGTGGGTACGGTGACGAGGAGAGGGGCGAGGGTGATGCGGAGGAGGAGGAGGAGGAGGAGGAGAGGGATTTGTTCGGCTCTGACAACGAGGATTACGTCAAGACCCCCGCGCGTAGCAACTACCTAGTCCCAGTGCTACCCTCAATACGGAACACCAACAATCATTCTCGGGGAGGATATGGGGGGCGGAATGGCAGAGGTCCACCTCTTCTTCCAAGGCCAGGAGGCCATCCAGGACGGCATAACTTTGGATATGGTGGGAGGTTTTCGCATGGAAATGGGCGTAATGTTGAAGGTTTTGTTTCAGAAATGAAGCTTAATAAGAGTGAAGAAACTTTATCTAGGAAGTTTGTTGCTTTTCAGGAGCCTTCTGAGATTGCATGCTACAGCCGTATTGAGGGTGGGGATGTATATTTTGATGACCGCAGCTTGAGGCTCTTCAAACGTAACATTTGCGACTATGTTGGTGAAAATCTCAATAAAGGATTTGAATCTTTTATAGAGAAAAGAGATTTGGGTTCAGAAGGATTTGGTGATCTTCTTGCATGCATAAGAAATTCAACTGTACCTCTTCAGAACATACATTTTGTGACATACCGCAACAATCTTAACAAGATATTGGCCACGGCTTATCTAAGAGAACCATGGAAGATGGGTGTGCACAAAAGAAATGGTGTTGTATACCTGGACGTCCATAAGCTCCCCGAAAGACCACAAAGTGAGGTTGAACGCCGGAGATGTTATTGGGGATATTCTTTTGAAAATCTTGCAACTGAGAATTCCATTGATGAGGATGGAAGAGGTATTGATGCAAATGTAGAGTTCTGTGCTGTAATAAAAACGAAATTGGGTGCACATCGTATTATCATGGGTGCTGAGATGGACTGCTGTGACGCAACTGATGATGGTAGGCGGTTCTACGTGGAGTTGAAAACAAGCAGAGAGCTGGAGTACCATACAGTGGAAAAATTTGAGAAAGAGAAGTTGCTTCGATTCTGGATTCAATCATTTATTGCTGGTGTTCCATATGTTGTTGTTGGATTCAGGTAGTATTCATTCTTTATTGTTTTCCCTTACGCCATCCATTTTTTGTAGTCAATGTGATGAGCTTTCTATCACCTGACAGCTGGCATTTTTGCAATGGAAAATGATTTTCGTGATAAAATGTTTGCTGATACAATTTACATGTTAAAGAAGCTGTGCAATGTTAGTATTGGGCCTTCTGCTTGGCTAGGAGATTGACATGCTGGTTATCACAAATCAGTATGCCACTATGGTTGTCCTCTACAAGGAACAAGAGTAATTTCATTTACACCTGGTGTCATCAACTGTGTACGAAGCAAGCTCATATTTGTGATAGTCAGTCGTTTCTCATGGATGTCCTGTTGCAATAAATAATTGTGCTGCCTACCCAACTTTTGTGGGGCTAAAGGCTGCTGGTGCTATTACAATAAATATTTTATTATTTGGTACTAAGGTATATTTTTCCCGGTACGTGTATGCTCATTTTCGAGTTAATTTTGTCTAAATAATTACAACACGATTTCATCTTCGGGATACCAAATCTTTGTGTAGTAAACTAGAGGTTCATGGAGACATGGACTATTTCTGGTAATATACTGATATGTCTCCATTTATTGATTGTAATAGGCATAATAACTTAAACACATACTTGATTTTCTAGATTCTTCAGTTCAATTTGTTTGACTGCATCACATGTACTTGATAAAATCGTATGCTTATTTTTAATACAATGTTCTGATTTGGTGTGGTATTTTGCTCAATATTTAACCTACCCCATATGATGCAAAAGAAGGCTTTTACTTTTTTAACTTCGACTTTGTCCCAATTTTACATTGATTCCAGTGGCTTGTATTTGTAACTTGAACTAGTACCCCTCAGCATTTTCCTACTAATAAAGGAGTTTCAACCATATATTTTTTTTACCTGCAGGAATGATGCTGGTGTACTTATACGGACTGAGAGACTAAGAACCAAAGAAATAACACAAAAGGTGAAAGCGAAGAACTACTGGCAGGGAGGTGTTTGCTTGGCCTTCGCTGATGAGGTCTTATGCTGGTTGTATGGCACTGTTAGAGAAAACGAGGACTACATCCTGCAATTTGTACATCCATTCAATCGCTTGGAACTTCTACGTGCCCAGTCTCCCTGTCCTGATGCCATCACTCATCATGTGGAGCAGCTCTCTGGTACAGCAGGCTAGGTTAATTCGTACACACAACTTCGGCAAGTAAAAGGGCTGTTTGAGGTAGATCCGTGTTGAAGGATTCTATTCTAGGGGTGCTGACTCTTAAACAAAACTTCGGCAATTATATAATGGTTGAGCTGACGACTTACCCAGCCAAGCAACATAGGCCGACGACTAAATGGTTTGCTCTTTGAACTGCCAAAGAGATTTTGAAATTGTCAAAACCTTGTGTTTCTCCAGTAACATTAAGTTATAAATTAGGGAAATGGAGAGCTATGCGGCAATGCTACTACTGGGTCATGCCACCGAGGCACCAATGATGTAACTCTCTACCAGATACCAGTACCAAGGGAAATGATATGAATTCTAG]
[+] EMBL CB623296             [                                                                                                                                                                                                                                                                                                                                                                     GCCGGTGGGTACGGTGACGAGGAGAGGGGCGAGGGTGATGCGGAGGAGGAGGAGGAGGAGGAGGAGAGGGATTTGTTCGGCTCTGACAACGAGGATTACGTCAAGACCCCCGCGCGTAGCAACTACCTAGTCCCAGTGCTACCCTCAATACGGAACACCAACAATCATTCTCGGGGAGGATATGGGGGGCGGAATGGCAGAGGTCCACCTCTTCTTCCAAGGCCAGGAGGCCATCCAGGACGGCATAACTTTGGATATGGTGGGAGGTTTTCGCATGGAAATGGGCGTAATGTTGAAGGTTTTGTTTCAGAAATGAAGCTTAATAAGAGTGAAGAAACTTTATCTAGGAAGTTTGTTGCTTTTCAGGAGCCTTCTGAGATTGCATGCTACAGCCGTATTGAGGGTGGGGATGTATATTTTGATGACCGCAGCTTGAGGCTCTTCAAACGTAACATTTGCGACTATGTTGGTGAAAATCTCAATAAAGGATTTGAATCTTTTATAGAGAAAAGAGATTTGGGTTCAGAAGGATTTGGTGATCTTCTTGCATGCATAAGAAATTCAACTGTACCTCTTCAGAACATACATTTTGTGACATACCGCAACAATCTTAACAAGATATTGGCCACGGCTTATCTAAGAGAACCATGGAAGATGGGTGTGCACAAAAGAAATGGTGTTGTATACCTGGACGTCCATAAGCTCCCCGAAAGACCACAAAGTGAGGTTGAACGCCGGAGATGTTATTGGGGATATTCTTTTNGAAATCTTGCAACTGAGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB622911             [                                                                                                                                                                                                                                                                                                                                                                     GCCGGTGGGTACGGTGACGAGGAGAGGGGCGAGGGTGATGCGGAGGAGGAGGAGGAGGAGGAGGAGAGGGATTTGTTCGGCTCTGACAACGAGGATTACGTCAAGACCCCCGCGCGTAGCAACTACCTAGTCCCAGTGCTACCCTCAATACGGAACACCAACAATCATTCTCGGGGAGGATATGGGGGGCGGAATGGCAGAGGTCCACCTCTTCTTCCAAGGCCAGGAGGCCATCCAGGACGGCATAACTTTGGATATGGTGGGAGGTTTTCGCATGGAAATGGGCGTAATGTTGAAGGTTTTGTTTCAGAAATGAAGCTTAATAAGAGTGAAGAAACTTTATCTAGGAAGTTTGTTGCTTTTCAGGAGCCTTCTGAGATTGCATGCTACAGCCGTATTGAGGGTGGGGATGTATATTTTGATGACCGCAGCTTGAGGCTCTTCAAACGTAACATTTGCGACTATGTTGGTGAAAATCTCAATAAAGGATTTGAATCTTTTATAGAGAAAAGAGATTTGGGTTCAGAAGGATTTGGTGATCTTCTTGCATGCATAAGAAATTCAACTGTACCTCTTCAGAACATACATTTTGTGACATACCGCAACAATCTTAACAAGATATTGGCCACGGCTTATCTAAGAGAACCATGGAAGATGGGTGTGCACAAAAGAAATGGTGTTGTATACCTGGACGTCCATAAGCTCCCCNGAAGACCACAAAGTGAGGTTGAACGCCGGAGATGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]




>consensus_11989#0
CGCATCGCATCGCACCACAAACCCTCCCCCCCGACCAGAAAGCCAAGAAAGAAACCTTTC
TTCGTCGGTCTCTCTCTCTCTCTGCCCATGGACTTCTCGGAGCAGGACGTCGAAATCTTC
GGCGAGGACTACGACGACGCCGAGGCCGACGGCGGCGGCGGCGGCGGTGCCTCGTCCGGC
TCCTCCTCCCCGTCCTCATCCTCCTCGTCGTCCGCCGCCGGGTCCTCCTCCTCCTCCAGC
GGCGCCTCCAGCAGCAGCGGCGGGGGCGGGGGTGGGGGCGAGGACGAGGACGGGGTCGAC
CAGGGGGACGCCAGGGGGTACGACGACGACCCGTTCGACGGCGCGCCCGCGAGGGCCGCC
GGTGGGTACGGTGACGAGGAGAGGGGCGAGGGTGATGCGGAGGAGGAGGAGGAGGAGGAG
GAGAGGGATTTGTTCGGCTCTGACAACGAGGATTACGTCAAGACCCCCGCGCGTAGCAAC
TACCTAGTCCCAGTGCTACCCTCAATACGGAACACCAACAATCATTCTCGGGGAGGATAT
GGGGGGCGGAATGGCAGAGGTCCACCTCTTCTTCCAAGGCCAGGAGGCCATCCAGGACGG
CATAACTTTGGATATGGTGGGAGGTTTTCGCATGGAAATGGGCGTAATGTTGAAGGTTTT
GTTTCAGAAATGAAGCTTAATAAGAGTGAAGAAACTTTATCTAGGAAGTTTGTTGCTTTT
CAGGAGCCTTCTGAGATTGCATGCTACAGCCGTATTGAGGGTGGGGATGTATATTTTGAT
GACCGCAGCTTGAGGCTCTTCAAACGTAACATTTGCGACTATGTTGGTGAAAATCTCAAT
AAAGGATTTGAATCTTTTATAGAGAAAAGAGATTTGGGTTCAGAAGGATTTGGTGATCTT
CTTGCATGCATAAGAAATTCAACTGTACCTCTTCAGAACATACATTTTGTGACATACCGC
AACAATCTTAACAAGATATTGGCCACGGCTTATCTAAGAGAACCATGGAAGATGGGTGTG
CACAAAAGAAATGGTGTTGTATACCTGGACGTCCATAAGCTCCCCGAAAGACCACAAAGT
GAGGTTGAACGCCGGAGATGTTATTGGGGATATTCTTTTGAAAATCTTGCAACTGAGAAT
TCCATTGATGAGGATGGAAGAGGTATTGATGCAAATGTAGAGTTCTGTGCTGTAATAAAA
ACGAAATTGGGTGCACATCGTATTATCATGGGTGCTGAGATGGACTGCTGTGACGCAACT
GATGATGGTAGGCGGTTCTACGTGGAGTTGAAAACAAGCAGAGAGCTGGAGTACCATACA
GTGGAAAAATTTGAGAAAGAGAAGTTGCTTCGATTCTGGATTCAATCATTTATTGCTGGT
GTTCCATATGTTGTTGTTGGATTCAGGTAGTATTCATTCTTTATTGTTTTCCCTTACGCC
ATCCATTTTTTGTAGTCAATGTGATGAGCTTTCTATCACCTGACAGCTGGCATTTTTGCA
ATGGAAAATGATTTTCGTGATAAAATGTTTGCTGATACAATTTACATGTTAAAGAAGCTG
TGCAATGTTAGTATTGGGCCTTCTGCTTGGCTAGGAGATTGACATGCTGGTTATCACAAA
TCAGTATGCCACTATGGTTGTCCTCTACAAGGAACAAGAGTAATTTCATTTACACCTGGT
GTCATCAACTGTGTACGAAGCAAGCTCATATTTGTGATAGTCAGTCGTTTCTCATGGATG
TCCTGTTGCAATAAATAATTGTGCTGCCTACCCAACTTTTGTGGGGCTAAAGGCTGCTGG
TGCTATTACAATAAATATTTTATTATTTGGTACTAAGGTATATTTTTCCCGGTACGTGTA
TGCTCATTTTCGAGTTAATTTTGTCTAAATAATTACAACACGATTTCATCTTCGGGATAC
CAAATCTTTGTGTAGTAAACTAGAGGTTCATGGAGACATGGACTATTTCTGGTAATATAC
TGATATGTCTCCATTTATTGATTGTAATAGGCATAATAACTTAAACACATACTTGATTTT
CTAGATTCTTCAGTTCAATTTGTTTGACTGCATCACATGTACTTGATAAAATCGTATGCT
TATTTTTAATACAATGTTCTGATTTGGTGTGGTATTTTGCTCAATATTTAACCTACCCCA
TATGATGCAAAAGAAGGCTTTTACTTTTTTAACTTCGACTTTGTCCCAATTTTACATTGA
TTCCAGTGGCTTGTATTTGTAACTTGAACTAGTACCCCTCAGCATTTTCCTACTAATAAA
GGAGTTTCAACCATATATTTTTTTTACCTGCAGGAATGATGCTGGTGTACTTATACGGAC
TGAGAGACTAAGAACCAAAGAAATAACACAAAAGGTGAAAGCGAAGAACTACTGGCAGGG
AGGTGTTTGCTTGGCCTTCGCTGATGAGGTCTTATGCTGGTTGTATGGCACTGTTAGAGA
AAACGAGGACTACATCCTGCAATTTGTACATCCATTCAATCGCTTGGAACTTCTACGTGC
CCAGTCTCCCTGTCCTGATGCCATCACTCATCATGTGGAGCAGCTCTCTGGTACAGCAGG
CTAGGTTAATTCGTACACACAACTTCGGCAAGTAAAAGGGCTGTTTGAGGTAGATCCGTG
TTGAAGGATTCTATTCTAGGGGTGCTGACTCTTAAACAAAACTTCGGCAATTATATAATG
GTTGAGCTGACGACTTACCCAGCCAAGCAACATAGGCCGACGACTAAATGGTTTGCTCTT
TGAACTGCCAAAGAGATTTTGAAATTGTCAAAACCTTGTGTTTCTCCAGTAACATTAAGT
TATAAATTAGGGAAATGGAGAGCTATGCGGCAATGCTACTACTGGGTCATGCCACCGAGG
CACCAATGATGTAACTCTCTACCAGATACCAGTACCAAGGGAAATGATATGAATTCTAG

consensusID : consensus_11989#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 867
fasta sequence

                              [AGTTCTGTGCTGTATAAAAACGAAATGGGGTGCACATCGTATTATCATGGGTGCTGAGATGGACTGCTGTGACGCAACTGATGATGGTAGGCGGTTCTACGTGGAGTTGAAAACAAGCAGAGAGCTGGAGTACCATACAGTGGAAAAATTTGAGAAAGAGAAGTTGCTTCGATTCTGGATTCAATCATTTATTGCTGGTGTTCCATATGTTGTTGTTGGATTCAGGAATGATGCTGGTGTACTTATACGGACTGAGAGACTAAGAACCAAAGAAATAACACAAAAGGTGAAAGCGAAGAACTACTGGCAGGGAGGTGTTTGCTTGGCCTTCGCTGATGAGGTCTTATGCTGGTTGTATGGCACTGTTAGAGAAAACGAGGACTACATCCTGCAATTTGTACATCCATTCAATCGCTTGGAACTTCTACGTGCCCAGTCTCCCTGTCCTGATGTCATCACTCATCATGTGGAGCAGCTCTCTGGTACAGCAGGCTAGGTTAATTCGTACACACAACTTCGGCAAGTAAAAGGGCTGTTTGAGGTAGATCCGTGTTGAAGGATTCTATTCTAGGGGTGCTGACTCTTAAACAAAACTTCGGCAATTATATAATGGTTGAGCTGACGACTTACCCAGCCAAGCAACATAGGCCGACGACTAAATGGTTTGCTCTTTGAACTGCCAAAGAGATTTTGAAATTGTCAAAACCTTGTGTTTCTCCAGTAACATTAAGTTATAAATTAGGGAAATGGAGAGCTATGCGGCAATGCTACTACTGGGTCATGCCACCGAGGCACCAATGATGTAACTCTCTACCAGATACCAGTACCAAGGGAAATGATATGAATTCTAGAGAGTTTCTGAACTAA]

[-] EMBL CB623297             [AGTTCTGTGCTGTATAAAAACGAAATGGGGTGCACATCGTATTATCATGGGTGCTGAGATGGACTGCTGTGACGCAACTGATGATGGTAGGCGGTTCTACGTGGAGTTGAAAACAAGCAGAGAGCTGGAGTACCATACAGTGGAAAAATTTGAGAAAGAGAAGTTGCTTCGATTCTGGATTCAATCATTTATTGCTGGTGTTCCATATGTTGTTGTTGGATTCAGGAATGATGCTGGTGTACTTATACGGACTGAGAGACTAAGAACCAAAGAAATAACACAAAAGGTGAAAGCGAAGAACTACTGGCAGGGAGGTGTTTGCTTGGCCTTCGCTGATGAGGTCTTATGCTGGTTGTATGGCACTGTTAGAGAAAACGAGGACTACATCCTGCAATTTGTACATCCATTCAATCGCTTGGAACTTCTACGTGCCCAGTCTCCCTGTCCTGATGTCATCACTCATCATGTGGAGCAGCTCTCTGGTACAGCAGGCTAGGTTAATTCGTACACACAACTTCGGCAAGTAAAAGGGCTGTTTGAGGTAGATCCGTGTTGAAGGATTCTATTCTAGGGGTGCTGACTCTTAAACAAAACTTCGGCAATTATATAATGGTTGAGCTGACGACTTACCCAGCCAAGCAACATAGGCCGACGACTAAATGGTTTGCTCTTTGAACTGCCAAAGAGATTTTGAAATTGTCAAAACCTTGTGTTTCTCCAGTAACATTAAGTTATAAATTAGGGAAATGGAGAGCTATGCGGCAATGCTACTACTGGGTCATGCCACCGAGGCACCAATGATGTAACTCTCTACCAGATACCAGTACCAAGGGAAATGATATGAATTCTAGAGAGTTTCTGAAC   ]
[-] EMBL CB620452             [                                                                 GCTGTGACGCAACTGATGATGGTAGGCGGTTCTACGTGGAGTTGAAAACAAGCAGAGAGCTGGAGTACCATACAGTGGAAAAATTTGAGAAAGAGAAGTTGCTTCGATTCTGGATTCAATCATTTATTGCTGGTGTTCCATATGTTGTTGTTGGATTCAGGAATGATGCTGGTGTACTTATACGGACTGAGAGACTAAGAACCAAAGAAATAACACAAAAGGTGAAAGCGAAGAACTACTGGCAGGGAGGTGTTTGCTTGGCCTTCGCTGATGAGGTCTTATGCTGGTTGTATGGCACTGTTAGAGAAAACGAGGACTACATCCTGCAATTTGTACATCCATTCAATCGCTTGGAACTTCTACGTGCCCAGTCTCCCTGTCCTGATGTCATCACTCATCATGTGGAGCAGCTCTCTGGTACAGCAGGCTAGGTTAATTCGTACACACAACTTCGGCAAGTAAAAGGGCTGTTTGAGGTAGATCCGTGTTGAAGGATTCTATTCTAGGGGTGCTGACTCTTAAACAAAACTTCGGCAATTATATAATGGTTGAGCTGACGACTTACCCAGCCAAGCAACATAGGCCGACGACTAAATGGTTTGCTCTTTGAACTGCCAAAGAGATTTTGAAATTGTCAAAACCTTGTGTTTCTCCAGTAACATTAAGTTATAAATTAGGGAAATGGAGAGCTATGCGGCAATGCTACTACTGGGTCATGCCACCGAGGCACCAATGATGTAACTCTCTACCAGATACCAGTACCAAGGGAAATGATATGAATTCTAGAGAGTTTCTGAACTA ]
[-] EMBL CB622912             [                                                                  CTGTGACGCAACTGATGATGGTAGGCGGTTCTACGTGGAGTTGAAAACAAGCAGAGAGCTGGAGTACCATACAGTGGAAAAATTTGAGAAAGAGAAGTTGCTTCGATTCTGGATTCAATCATTTATTGCTGGTGTTCCATATGTTGTTGTTGGATTCAGGAATGATGCTGGTGTACTTATACGGACTGAGAGACTAAGAACCAAAGAAATAACACAAAAGGTGAAAGCGAAGAACTACTGGCAGGGAGGTGTTTGCTTGGCCTTCGCTGATGAGGTCTTATGCTGGTTGTATGGCACTGTTAGAGAAAACGAGGACTACATCCTGCAATTTGTACATCCATTCAATCGCTTGGAACTTCTACGTGCCCAGTCTCCCTGTCCTGATGTCATCACTCATCATGTGGAGCAGCTCTCTGGTACAGCAGGCTAGGTTAATTCGTACACACAACTTCGGCAAGTAAAAGGGCTGTTTGAGGTAGATCCGTGTTGAAGGATTCTATTCTAGGGGTGCTGACTCTTAAACAAAACTTCGGCAATTATATAATGGTTGAGCTGACGACTTACCCAGCCAAGCAACATAGGCCGACGACTAAATGGTTTGCTCTTTGAACTGCCAAAGAGATTTTGAAATTGTCAAAACCTTGTGTTTCTCCAGTAACATTAAGTTATAAATTAGGGAAATGGAGAGCTATGCGGCAATGCTACTACTGGGTCATGCCACCGAGGCACCAATGATGTAACTCTCTACCAGATACCAGTACCAAGGGAAATGATATGAATTCTAGAGAGT           ]
[-] EMBL CA762320             [                                                                                                                                                                                 GATTCGATCATGCACCGCGGGTGTCACATATGCTGCTCTCGCATCCAGCAATCACCCTGGTGTCCTCATCCGGCCTCAGACCCTAACACCCAAAGAAATAGCACAAAAGGTCAAACCGAAGACCTCCTGGCAGGGAGGTGTTCGCTTGGCCTTCGCTGATGAGGTCTTATCCTGGTTGTATGGCACTGTTAGAGAAACCGAGGACTACATCCTGCAATCTGTACATCCATTCAATCGCTTGGAACTTCTACGTGCCCAGTCTCCCTGTCCTGATGCCATCACTCATCATGTGGAGCAGCTCTCTGGTACAGCAGGCTAGGTTAATTCGTACACACACCTTCGGCAAGTAAAAGGGCTGTTTGAGGTAGATCCGTGTTGAAGGATTCTATTCTAGGGGTGCTGACTCTTAAACAAAACTTCGGCAATTATATAATGGTTGAGCTGACGACTTACCCAGCCAAGCAACATAGGCCGACGACTAAATGGTTTGCTCTTTGAGCTGCCAAAGAGATTTTGAAATTGTCAAAACCTTGTGTTTCTCCAGTAACATTAAGTTATAAATTAGGGAAATGGAGAGCTATGCGGCAATGCTACTACTGGGTCATGCCACCGAGGCACCAATGATGTAACTCTCTACCAGATACCAGTACCAAGGGAAATGATATGAATTCTAGAGAGTTTCTGAACTAA]




>consensus_11989#1
AGTTCTGTGCTGTATAAAAACGAAATGGGGTGCACATCGTATTATCATGGGTGCTGAGAT
GGACTGCTGTGACGCAACTGATGATGGTAGGCGGTTCTACGTGGAGTTGAAAACAAGCAG
AGAGCTGGAGTACCATACAGTGGAAAAATTTGAGAAAGAGAAGTTGCTTCGATTCTGGAT
TCAATCATTTATTGCTGGTGTTCCATATGTTGTTGTTGGATTCAGGAATGATGCTGGTGT
ACTTATACGGACTGAGAGACTAAGAACCAAAGAAATAACACAAAAGGTGAAAGCGAAGAA
CTACTGGCAGGGAGGTGTTTGCTTGGCCTTCGCTGATGAGGTCTTATGCTGGTTGTATGG
CACTGTTAGAGAAAACGAGGACTACATCCTGCAATTTGTACATCCATTCAATCGCTTGGA
ACTTCTACGTGCCCAGTCTCCCTGTCCTGATGTCATCACTCATCATGTGGAGCAGCTCTC
TGGTACAGCAGGCTAGGTTAATTCGTACACACAACTTCGGCAAGTAAAAGGGCTGTTTGA
GGTAGATCCGTGTTGAAGGATTCTATTCTAGGGGTGCTGACTCTTAAACAAAACTTCGGC
AATTATATAATGGTTGAGCTGACGACTTACCCAGCCAAGCAACATAGGCCGACGACTAAA
TGGTTTGCTCTTTGAACTGCCAAAGAGATTTTGAAATTGTCAAAACCTTGTGTTTCTCCA
GTAACATTAAGTTATAAATTAGGGAAATGGAGAGCTATGCGGCAATGCTACTACTGGGTC
ATGCCACCGAGGCACCAATGATGTAACTCTCTACCAGATACCAGTACCAAGGGAAATGAT
ATGAATTCTAGAGAGTTTCTGAACTAA

consensusID : consensus_11989#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 772
fasta sequence

                              [CCCCCCCTACCAGAAAGCCAAGAAAGAAACCTTTCTTCGTCGGTCTCTCTCTCTCTCTGCCCATGGACTTCTCGGAGCAGGACGTCGAAATCTTCGACGAGGACGGGGTCGACCAGGGGGACGCCAGGGGGTACGACGACGACCCGTTCGACGGCGCGCCCGCGAGGGCCGCCGGTGGGTACGGTGACGAGGAGAGGGGCGAGGGTGATGCGGAGGAGGAGGAGGAGGAGGAGGAGAGGGATTTGTTCGGCTCTGACAACGAGGATTACGTCAAGACCCCCGCGCGTAGCAACTACCTAGTCCCAGTGCTACCCTCAATACGGAACACCAACAATCATTCTCGGGGAGGATATGGGGGGCGGAATGGCAGAGGTCCACCTCTTCTTCCAAGGCCAGGAGGCCATCCAGGACGGCATAACTTTGGATATGGTGGGAGGTTTTCGCATGGAAATGGGCGTAATGTTGAAGGTTTTGTTTCAGAAATGAAGCTTAATAAGAGTGAAGAAACTTTATCTAGGAAGTTTGTTGCTTTTCAGGAGCCTTCTGAGATTGCATGCTACAGCCGTATTGAGGGTGGGGATGTATATTTTGATGACCGCAGCTTGAGGCTCTTCAAACGTAACATTTGCGACTATGTTGGTGAAAATCTCAATAAAGGATTTGAATCTTTTATAGAGAAAAGAGATTTGGGTTCAGAAGGATTTGGTGATCTTCTTGCATGCATAAGAAATTCAACTGTACCTCTTCAGAACATACATTTTGTGACATACCG]

[+] EMBL CB620451             [CCCCCCCTACCAGAAAGCCAAGAAAGAAACCTTTCTTCGTCGGTCTCTCTCTCTCTCTGCCCATGGACTTCTCGGAGCAGGACGTCGAAATCTTCGACGAGGACGGGGTCGACCAGGGGGACGCCAGGGGGTACGACGACGACCCGTTCGACGGCGCGCCCGCGAGGGCCGCCGGTGGGTACGGTGACGAGGAGAGGGGCGAGGGTGATGCGGAGGAGGAGGAGGAGGAGGAGGAGAGGGATTTGTTCGGCTCTGACAACGAGGATTACGTCAAGACCCCCGCGCGTAGCAACTACCTAGTCCCAGTGCTACCCTCAATACGGAACACCAACAATCATTCTCGGGGAGGATATGGGGGGCGGAATGGCAGAGGTCCACCTCTTCTTCCAAGGCCAGGAGGCCATCCAGGACGGCATAACTTTGGATATGGTGGGAGGTTTTCGCATGGAAATGGGCGTAATGTTGAAGGTTTTGTTTCAGAAATGAAGCTTAATAAGAGTGAAGAAACTTTATCTAGGAAGTTTGTTGCTTTTCAGGAGCCTTCTGAGATTGCATGCTACAGCCGTATTGAGGGTGGGGATGTATATTTTGATGACCGCAGCTTGAGGCTCTTCAAACGTAACATTTGCGACTATGTTGGTGAAAATCTCAATAAAGGATTTGAATCTTTTATAGAGAAAAGAGATTTGGGTTCAGAAGGATTTGGTGATCTTCTTGCATGCATAAGAAATTCAACTGTACCTCTTCAGAACATACATTTTGTGACATACCG]




>consensus_11989#2
CCCCCCCTACCAGAAAGCCAAGAAAGAAACCTTTCTTCGTCGGTCTCTCTCTCTCTCTGC
CCATGGACTTCTCGGAGCAGGACGTCGAAATCTTCGACGAGGACGGGGTCGACCAGGGGG
ACGCCAGGGGGTACGACGACGACCCGTTCGACGGCGCGCCCGCGAGGGCCGCCGGTGGGT
ACGGTGACGAGGAGAGGGGCGAGGGTGATGCGGAGGAGGAGGAGGAGGAGGAGGAGAGGG
ATTTGTTCGGCTCTGACAACGAGGATTACGTCAAGACCCCCGCGCGTAGCAACTACCTAG
TCCCAGTGCTACCCTCAATACGGAACACCAACAATCATTCTCGGGGAGGATATGGGGGGC
GGAATGGCAGAGGTCCACCTCTTCTTCCAAGGCCAGGAGGCCATCCAGGACGGCATAACT
TTGGATATGGTGGGAGGTTTTCGCATGGAAATGGGCGTAATGTTGAAGGTTTTGTTTCAG
AAATGAAGCTTAATAAGAGTGAAGAAACTTTATCTAGGAAGTTTGTTGCTTTTCAGGAGC
CTTCTGAGATTGCATGCTACAGCCGTATTGAGGGTGGGGATGTATATTTTGATGACCGCA
GCTTGAGGCTCTTCAAACGTAACATTTGCGACTATGTTGGTGAAAATCTCAATAAAGGAT
TTGAATCTTTTATAGAGAAAAGAGATTTGGGTTCAGAAGGATTTGGTGATCTTCTTGCAT
GCATAAGAAATTCAACTGTACCTCTTCAGAACATACATTTTGTGACATACCG

consensusID : consensus_11989#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 303
fasta sequence

                              [AATGTGATGATGAATGGGTGTGAGCTGGACGACTTGACCCAAGCCATAGCACAACATTAGGCACGACGACTGATAAATCGGTGTTGGCTGCTTGTGAACTGCCACAAGAGATTGTTGAAATNTGGTGCAAAACCCTGTGTGGTTTGCTCCAGTGAACCTTAACGTTATGAAATTAGGGAAATGGAGAGCTATGCGGCAATGGCTACTACTGGGTCATGGCCACCCGAGGCACCTCATGGATGTAACTGCTGTCTACCAGATACCAGTACCAAGGGAAATGATATGAATTTTAGAGAGTTTNTG]

[+] EMBL BQ907120             [AATGTGATGATGAATGGGTGTGAGCTGGACGACTTGACCCAAGCCATAGCACAACATTAGGCACGACGACTGATAAATCGGTGTTGGCTGCTTGTGAACTGCCACAAGAGATTGTTGAAATNTGGTGCAAAACCCTGTGTGGTTTGCTCCAGTGAACCTTAACGTTATGAAATTAGGGAAATGGAGAGCTATGCGGCAATGGCTACTACTGGGTCATGGCCACCCGAGGCACCTCATGGATGTAACTGCTGTCTACCAGATACCAGTACCAAGGGAAATGATATGAATTTTAGAGAGTTTNTG]




>consensus_11989#3
AATGTGATGATGAATGGGTGTGAGCTGGACGACTTGACCCAAGCCATAGCACAACATTAG
GCACGACGACTGATAAATCGGTGTTGGCTGCTTGTGAACTGCCACAAGAGATTGTTGAAA
TNTGGTGCAAAACCCTGTGTGGTTTGCTCCAGTGAACCTTAACGTTATGAAATTAGGGAA
ATGGAGAGCTATGCGGCAATGGCTACTACTGGGTCATGGCCACCCGAGGCACCTCATGGA
TGTAACTGCTGTCTACCAGATACCAGTACCAAGGGAAATGATATGAATTTTAGAGAGTTT
NTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      CGCATCGCATCGCACCACAAACCCTCCCCCCCGACCAGAAAGCCAAGAAAGAAACCTTTC 60
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      TTCGTCGGTCTCTCTCTCTCTCTGCCCATGGACTTCTCGGAGCAGGACGTCGAAATCTTC 120
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      GGCGAGGACTACGACGACGCCGAGGCCGACGGCGGCGGCGGCGGCGGTGCCTCGTCCGGC 180
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      TCCTCCTCCCCGTCCTCATCCTCCTCGTCGTCCGCCGCCGGGTCCTCCTCCTCCTCCAGC 240
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      GGCGCCTCCAGCAGCAGCGGCGGGGGCGGGGGTGGGGGCGAGGACGAGGACGGGGTCGAC 300
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      CAGGGGGACGCCAGGGGGTACGACGACGACCCGTTCGACGGCGCGCCCGCGAGGGCCGCC 360
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      GGTGGGTACGGTGACGAGGAGAGGGGCGAGGGTGATGCGGAGGAGGAGGAGGAGGAGGAG 420
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      GAGAGGGATTTGTTCGGCTCTGACAACGAGGATTACGTCAAGACCCCCGCGCGTAGCAAC 480
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      TACCTAGTCCCAGTGCTACCCTCAATACGGAACACCAACAATCATTCTCGGGGAGGATAT 540
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      GGGGGGCGGAATGGCAGAGGTCCACCTCTTCTTCCAAGGCCAGGAGGCCATCCAGGACGG 600
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      CATAACTTTGGATATGGTGGGAGGTTTTCGCATGGAAATGGGCGTAATGTTGAAGGTTTT 660
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      GTTTCAGAAATGAAGCTTAATAAGAGTGAAGAAACTTTATCTAGGAAGTTTGTTGCTTTT 720
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      CAGGAGCCTTCTGAGATTGCATGCTACAGCCGTATTGAGGGTGGGGATGTATATTTTGAT 780
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      GACCGCAGCTTGAGGCTCTTCAAACGTAACATTTGCGACTATGTTGGTGAAAATCTCAAT 840
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      AAAGGATTTGAATCTTTTATAGAGAAAAGAGATTTGGGTTCAGAAGGATTTGGTGATCTT 900
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      CTTGCATGCATAAGAAATTCAACTGTACCTCTTCAGAACATACATTTTGTGACATACCGC 960
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      AACAATCTTAACAAGATATTGGCCACGGCTTATCTAAGAGAACCATGGAAGATGGGTGTG 1020
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      CACAAAAGAAATGGTGTTGTATACCTGGACGTCCATAAGCTCCCCGAAAGACCACAAAGT 1080
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      GAGGTTGAACGCCGGAGATGTTATTGGGGATATTCTTTTGAAAATCTTGCAACTGAGAAT 1140
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      TCCATTGATGAGGATGGAAGAGGTATTGATGCAAATGTAGAGTTCTGTGCTGTAATAAAA 1200
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      ACGAAATTGGGTGCACATCGTATTATCATGGGTGCTGAGATGGACTGCTGTGACGCAACT 1260
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      GATGATGGTAGGCGGTTCTACGTGGAGTTGAAAACAAGCAGAGAGCTGGAGTACCATACA 1320
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      GTGGAAAAATTTGAGAAAGAGAAGTTGCTTCGATTCTGGATTCAATCATTTATTGCTGGT 1380
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      GTTCCATATGTTGTTGTTGGATTCAGGTAGTATTCATTCTTTATTGTTTTCCCTTACGCC 1440
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      ATCCATTTTTTGTAGTCAATGTGATGAGCTTTCTATCACCTGACAGCTGGCATTTTTGCA 1500
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      ATGGAAAATGATTTTCGTGATAAAATGTTTGCTGATACAATTTACATGTTAAAGAAGCTG 1560
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      TGCAATGTTAGTATTGGGCCTTCTGCTTGGCTAGGAGATTGACATGCTGGTTATCACAAA 1620
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      TCAGTATGCCACTATGGTTGTCCTCTACAAGGAACAAGAGTAATTTCATTTACACCTGGT 1680
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      GTCATCAACTGTGTACGAAGCAAGCTCATATTTGTGATAGTCAGTCGTTTCTCATGGATG 1740
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      TCCTGTTGCAATAAATAATTGTGCTGCCTACCCAACTTTTGTGGGGCTAAAGGCTGCTGG 1800
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      TGCTATTACAATAAATATTTTATTATTTGGTACTAAGGTATATTTTTCCCGGTACGTGTA 1860
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      TGCTCATTTTCGAGTTAATTTTGTCTAAATAATTACAACACGATTTCATCTTCGGGATAC 1920
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      CAAATCTTTGTGTAGTAAACTAGAGGTTCATGGAGACATGGACTATTTCTGGTAATATAC 1980
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      ------------------------------------------------------------
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      TGATATGTCTCCATTTATTGATTGTAATAGGCATAATAACTTAAACACATACTTGATTTT 2040
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      -------------------------------------------------AGTTCTGTGCT 11
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      CTAGATTCTTCAGTTCAATTTGTTTGACTGCATCACATGTACTTGATAAAATCGTATGCT 2100
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      GTATAAAAACGAAATG----GGGTGCACATCGTATTATCATGGGTGCTGAGATGGACTGC 67
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      TATTTTTAATACAATGTTCTGATTTGGTGTGGTATTTTGCTCAATATTTAACCTACCCCA 2160
consensus_11989#2      ------------------------------------------------------------
                                                                                   

consensus_11989#1      TGTGACGCAACTGATGATGGTAGGCGGTTCTACGTGGAGTTGAAAACAAGCAGAGAGCTG 127
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      TATGATGCAAAAGAAGGCTTTTACTTTTTTAACTTCGACTTTGTCCCAATTTTACA--TT 2218
consensus_11989#2      ----------CCCCCCCTACCAGAAAGCCAAGAAAGAAACCTTTCTTCGTCGGTCTCTCT 50
                                                                                   

consensus_11989#1      GAGTACCATACAGTGGAAAAATTTGAGAAAGAGAAGTTGCTTCGATTCTGGATTCAATCA 187
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      GATTCCAGTGGCTTGTATTTGTAACTTGAACTAGTACCCCTCAGCATTT---TCCTACTA 2275
consensus_11989#2      CTCTCTCTGCCCATGGACTTCTCGGAGCAGGACGTCGAAATCTTCGACGAGGACGGGGTC 110
                                                                                   

consensus_11989#1      TTTATTGCTGGTGTTCCATATGTTGTTGTTGGATTCAGGAATGATGCTGGTGTACTTAT- 246
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      ATAAAGGAGTTTCAACCATATATTTTTTTTACCTGCAGGAATGATGCTGGTGTACTTAT- 2334
consensus_11989#2      GACCAGGGGGACGCCAGGGGGTACGACGACGACCCGTTCGACGGCGCGCCCGCGAGGGCC 170
                                                                                   

consensus_11989#1      ACGGACTGAGAGACTAAGAACCAAAGAAATAACACAAAAGGTGAAAGCGAAGAACTACTG 306
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      ACGGACTGAGAGACTAAGAACCAAAGAAATAACACAAAAGGTGAAAGCGAAGAACTACTG 2394
consensus_11989#2      GCCGGTGGGTACGGTGACGAGGAGAGGGGCGAGGGTGATGCGGAGGAGGAGGAGGAGGAG 230
                                                                                   

consensus_11989#1      GCAGGGAGGTGTTTGCTTGGCCTTCGCTGATGAGGTC---TTATGCTGGTTGTATGGCAC 363
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      GCAGGGAGGTGTTTGCTTGGCCTTCGCTGATGAGGTC---TTATGCTGGTTGTATGGCAC 2451
consensus_11989#2      GAGGAGAGGGATTTGTTCGGCTCTGACAACGAGGATTACGTCAAGACCCCCGCGCGTAGC 290
                                                                                   

consensus_11989#1      TGTTAGAGAAAACGAGGACTACATCCTGCAATTTGTACATCCATTCAATCGCTTGGAACT 423
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      TGTTAGAGAAAACGAGGACTACATCCTGCAATTTGTACATCCATTCAATCGCTTGGAACT 2511
consensus_11989#2      AACTACCTAGTCCCAGTGCTACCCTCAATACGGAACACCAACAATCATTCTCGGGGAGGA 350
                                                                                   

consensus_11989#1      TCTACGTGCCCAGTCTCCCTGTCCTGATGTCATCACTCATCATGTGGAGCAGCTCTCTGG 483
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      TCTACGTGCCCAGTCTCCCTGTCCTGATGCCATCACTCATCATGTGGAGCAGCTCTCTGG 2571
consensus_11989#2      TATGGGGGGCGGAATGGCAGAGGTCCACCTCTTCTTCCA--AGGCCAGGAGGCCATCCAG 408
                                                                                   

consensus_11989#1      TACAGCAGGCTAGGTTAATTCGTACACACAACTTCGGCAAGTAAAAGGGCTGTTTGAGGT 543
consensus_11989#3      ------------------------------------------------------------
consensus_11989#0      TACAGCAGGCTAGGTTAATTCGTACACACAACTTCGGCAAGTAAAAGGGCTGTTTGAGGT 2631
consensus_11989#2      GACGGCA--TAACTTTGGATATGGTGGGAGGTTTTCGCATGGAAATGGGCGTAATGTTGA 466
                                                                                   

consensus_11989#1      AGATCCGTGTTGAAGGATTCTATTCTAGGGGTGCTGACTCTTAAACAAAACTTCGGCAAT 603
consensus_11989#3      -------------AATGTGATGATGAATGGGTGTGAGCTGGACGACTTGACCCAAGCCAT 47
consensus_11989#0      AGATCCGTGTTGAAGGATTCTATTCTAGGGGTGCTGACTCTTAAACAAAACTTCGGCAAT 2691
consensus_11989#2      AGGTTTTGTTTCAGAAATGAAGCTTAATAAGAGTGAA----GAAACTTTATCTAGGAAGT 522
                                        *     *  *   * *           **   *     *   *

consensus_11989#1      TATATAATGGTTGAGCTGACGACTTACCCAGCCAAGCA-ACATAGGCCGACGACTAAATG 662
consensus_11989#3      AGCACAACATTAGGCACGACGACTGA----------------TAAATCGGTG------TT 85
consensus_11989#0      TATATAATGGTTGAGCTGACGACTTACCCAGCCAAGCA-ACATAGGCCGACGACTAAATG 2750
consensus_11989#2      T-TGTTGCTTTTCAGGAGCCTTCTGAGATTGCATGCTACAGCCGTATTGAGGGTGGGGAT 581
                                 *      * *  ** *                      *  *        

consensus_11989#1      GTTTGCTCTTTGAACTGCCA-AAGAGATT-TTGAAATT--GT-CAAAACCTTGTGT---- 713
consensus_11989#3      GGCTGCT-TGTGAACTGCCACAAGAGATTGTTGAAATNTGGTGCAAAACCCTGTGTGGTT 144
consensus_11989#0      GTTTGCTCTTTGAACTGCCA-AAGAGATT-TTGAAATT--GT-CAAAACCTTGTGT---- 2801
consensus_11989#2      GTATATTTTGATGACCGCAGCTTGAGGCTCTTCAAACGTAACATTTGCGACTATGT---T 638
                       *  *  * *    ** **     ***  * ** ***               * ***    

consensus_11989#1      TTCTCCAGT-AACATTAA-GTTAT-AAATTAGGGAAATGGAGAGCTATGCGGCAATG-CT 769
consensus_11989#3      TGCTCCAGTGAACCTTAACGTTATGAAATTAGGGAAATGGAGAGCTATGCGGCAATGGCT 204
consensus_11989#0      TTCTCCAGT-AACATTAA-GTTAT-AAATTAGGGAAATGGAGAGCTATGCGGCAATG-CT 2857
consensus_11989#2      GGTGAAAATCTCAATAAAGGATTTGAATCTTTTATAGAGAAAAGAGATTTGGGTTCA-GA 697
                             * *     * ** * * * **  *     *  * * **  **  **        

consensus_11989#1      ACTACTGGGTCATG-CCACC-GAGGCACC--AATGATGTAACT---CTCTACCAGATACC 822
consensus_11989#3      ACTACTGGGTCATGGCCACCCGAGGCACCTCATGGATGTAACTGCTGTCTACCAGATACC 264
consensus_11989#0      ACTACTGGGTCATG-CCACC-GAGGCACC--AATGATGTAACT---CTCTACCAGATACC 2910
consensus_11989#2      AGGATTTGGTGATC-TTCTTGCATGCATA--AGAAATTCAACTGTACCTCTTCAGA-ACA 753
                       *  * * *** **         * ***    *   **  ****         **** ** 

consensus_11989#1      AGTACCAAGGGAAATGATATGAATTCTAGAGAGTTTCTGAACTAA 867
consensus_11989#3      AGTACCAAGGGAAATGATATGAATTTTAGAGAGTTTNTG------ 303
consensus_11989#0      AGTACCAAGGGAAATGATATGAATTCTAG---------------- 2939
consensus_11989#2      TACATTTTGTGACATACCG-------------------------- 772
                          *    * ** **