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Oryza sativa
cluster # 11998 cluster # 11998       Sequences # 9       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11998#0 length = 2130 sequences # 9  
consensusID : consensus_11998#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 2130
fasta sequence 
                              [TCGCACCCCACACCGCGGGACGATCTATCGGTCAGAAAAAGCGAGCAGAGCGGTGGGGGAGAATGGCGGTGGCGGCGGCGACGGTTCGATGGCTCGTCCTTCTCCTGGCCGTGTCGGCGGCGGCCACGGCGTCGCGCGAGAAGTGGTGGCATGGCGCCGGCGGCGAGGCGAGTGGTGGCGGCCACCTCGTGCAGAAGGAGTGGCGGAGGGTGGTCGCCGCGAGCGACGCTGGCCTGGTGACGGCCGTGGATGTCGCCGACGCGGCCGGCACCGCGTACCGGCTGCACTTCATCACGATGAGCCCCGGGACGCTGTTCCTCCCCGTGCAGCTGCACGCCGACATGGTGTTCTACGTGCACAGCGGGAGGGGCAAGGTGACTTACATAGAAGAAGGGGACAGTGAATCAAGTTCGCTTCAGGTGGAGAGGGGGGACGTCTACAACTTCGATCAGGGTACCATCCTCTACATTCAGAGTAACGCATGCGGCACGAGAGAGCGCCTTCAAATTTACGCCATCTTCACCAGCGACAGCATCAACGCTGATGACCCAAGGCATCCGACATCAGAAGTTTATTCCTTTGTCAGTGACCTGTTGAAAGGATTTGAAGTAGAAGTCCTTCGACCGGGCTTCGGGGTTCCACGCGAAGTTGTGGAATCCATCAAATCGACCAAAACCCCGCCGGCGATCATACCGTATAATCCAGAGGAGGAGGACGAGGACGACTCGTCAAATTGGACGGAGGAAATCACCGACGCGCTGTGGGGAGTGCGAGATCCTCACTTCCTGAACAAGAAGAAGAAGGACAAACAAAAGGACAAGCACAAGGGCAAGGACAAGAAGTCCAAGAGCAAGGCCTTCAACTTCTACTCCGGCAAGCCGGACGTCGAGAACTGCTACGGATGGAGCAGATCGATGACCAACCGAGACCTCGAGACCTTGCGGGGATCCAACATTGGCATGTTCATGGTGAACCTGACCACGGGCGCCATGATGGGACCTCACTGGAACCCGAGAGCGACCGAGATCGCCGTTGTGACCCAGGGCGCGGGGATGGTGCAGATAGTCTGTCCCAGCATCCCGTCCGGCGAGAGCAAGAAGCATCACCACGATGAGGAGGGCGGCCGTGGCGATCACGGCCACGGCGGCGGCGGCGTCCGGTGCAAGAACTCGTTGTTCAGGGTGAAGGAAGGCGACGTGCTCGTGGTGCCGCGGTTCCACCCCATGGCGCAGATATCCTTCAACAACGACTCGTTCGTGTTCGTCGGGTTCAGCACCGACATGGGCCACAACCACCCGCAGTTCCTCGCCGGGAGGCACTACGTCCTGCAGGTGATCGGCAAGGAGATTCTGGCGCGGTCGCTCGGCCAGGACAACTCCACCAACGTCGGGAGGCTGCTGTCGTCGCAGCGCGAGTCGGCGATAATGGCGTGCACCTCCTGCGCGGAGGAGCTGGAGAGGAAGGCGGAGGAGGAGGAAGAGGGTGGTGGAGGGAAGGGGGAGAAAGAGCGGGAGGAGGAAGAGAGGAGGCAGCGGGAGAAAGAGGAGGAAGAAAGGAGGAGACAAGAAGAGGAGAGGAAGAGGAGGGAAGAAGAAGAGAAGGAAAGGAGAGAGCGGGAGGAGGAGGAAAGGAGGCAGAGGGAGAAGGAAGAGAAGAAGAGGAGGGAGGAAGAAGA-GC--A-GAGGAGAGAAGAGGAAGAAGAAGAGCGGAGGA-GAGAGGAAGAGGAGGAGGAGCAAGAGGATGGAAGAGGAGATGAGCCAAAACCGAGGAGGGAAGAGGAGGAAGGAGACTGGGGAGAGCGGCAGATTCGTTTGCCCAGGAGCTTGAAAAAACGCTTCATCGGAATCAAGGGCAGGCTCTCCAGTGGCTAAGCAAGTGAGCAGAGAGGGACATTTGGAGGTGAACGCGTCCAGCTACAGTAGTTT-CTGCGTAAATAATGCTGGTCTTGCTCGTGTAGAGGCCGGCCTGCATA-CTACGTGCGTACTTTCGTTTCTTCCACTGTGTCGTGATGTAGCTGAGTTAAATAAGCTGTTGATGTGTATAATCGTAGCCTCCTCCCTTCCAAGAACCCGCCTGTAAACGGTTAAGTAAGCTGTTAATGTGTATAAACGTAGCTTTCCTCTCAAAAAAAAA]

[+] EMBL AK102651             [TCGCACCCCACACCGCGGGACGATCTATCGGTCAGAAAAAGCGAGCAGAGCGGTGGGGGAGAATGGCGGTGGCGGCGGCGACGGTTCGATGGCTCGTCCTTCTCCTGGCCGTGTCGGCGGCGGCCACGGCGTCGCGCGAGAAGTGGTGGCATGGCGCCGGCGGCGAGGCGAGTGGTGGCGGCCACCTCGTGCAGAAGGAGTGGCGGAGGGTGGTCGCCGCGAGCGACGCTGGCCTGGTGACGGCCGTGGATGTCGCCGACGCGGCCGGCACCGCGTACCGGCTGCACTTCATCACGATGAGCCCCGGGACGCTGTTCCTCCCCGTGCAGCTGCACGCCGACATGGTGTTCTACGTGCACAGCGGGAGGGGCAAGGTGACTTACATAGAAGAAGGGGACAGTGAATCAAGTTCGCTTCAGGTGGAGAGGGGGGACGTCTACAACTTCGATCAGGGTACCATCCTCTACATTCAGAGTAACGCATGCGGCACGAGAGAGCGCCTTCAAATTTACGCCATCTTCACCAGCGACAGCATCAACGCTGATGACCCAAGGCATCCGACATCAGAAGTTTATTCCTTTGTCAGTGACCTGTTGAAAGGATTTGAAGTAGAAGTCCTTCGACCGGGCTTCGGGGTTCCACGCGAAGTTGTGGAATCCATCAAATCGACCAAAACCCCGCCGGCGATCATACCGTATAATCCAGAGGAGGAGGACGAGGACGACTCGTCAAATTGGACGGAGGAAATCACCGACGCGCTGTGGGGAGTGCGAGATCCTCACTTCCTGAACAAGAAGAAGAAGGACAAACAAAAGGACAAGCACAAGGGCAAGGACAAGAAGTCCAAGAGCAAGGCCTTCAACTTCTACTCCGGCAAGCCGGACGTCGAGAACTGCTACGGATGGAGCAGATCGATGACCAACCGAGACCTCGAGACCTTGCGGGGATCCAACATTGGCATGTTCATGGTGAACCTGACCACGGGCGCCATGATGGGACCTCACTGGAACCCGAGAGCGACCGAGATCGCCGTTGTGACCCAGGGCGCGGGGATGGTGCAGATAGTCTGTCCCAGCATCCCGTCCGGCGAGAGCAAGAAGCATCACCACGATGAGGAGGGCGGCCGTGGCGATCACGGCCACGGCGGCGGCGGCGTCCGGTGCAAGAACTCGTTGTTCAGGGTGAAGGAAGGCGACGTGCTCGTGGTGCCGCGGTTCCACCCCATGGCGCAGATATCCTTCAACAACGACTCGTTCGTGTTCGTCGGGTTCAGCACCGACATGGGCCACAACCACCCGCAGTTCCTCGCCGGGAGGCACTACGTCCTGCAGGTGATCGGCAAGGAGATTCTGGCGCGGTCGCTCGGCCAGGACAACTCCACCAACGTCGGGAGGCTGCTGTCGTCGCAGCGCGAGTCGGCGATAATGGCGTGCACCTCCTGCGCGGAGGAGCTGGAGAGGAAGGCGGAGGAGGAGGAAGAGGGTGGTGGAGGGAAGGGGGAGAAAGAGCGGGAGGAGGAAGAGAGGAGGCAGCGGGAGAAAGAGGAGGAAGAAAGGAGGAGACAAGAAGAGGAGAGGAAGAGGAGGGAAGAAGAAGAGAAGGAAAGGAGAGAGCGGGAGGAGGAGGAAAGGAGGCAGAGGGAGAAGGAAGAGAAGAAGAGGAGGGAGGAAGAAGA GC  A GAGGAGAGAAGAGGAAGAAGAAGAGCGGAGGA GAGAGGAAGAGGAGGAGGAGCAAGAGGATGGAAGAGGAGATGAGCCAAAACCGAGGAGGGAAGAGGAGGAAGGAGACTGGGGAGAGCGGCAGATTCGTTTGCCCAGGAGCTTGAAAAAACGCTTCATCGGAATCAAGGGCAGGCTCTCCAGTGGCTAAGCAAGTGAGCAGAGAGGGACATTTGGAGGTGAACGCGTCCAGCTACAGTAGTTT CTGCGTAAATAATGCTGGTCTTGCTCGTGTAGAGGCCGGCCTGCATA CTACGTGCGTACTTTCGTTTCTTCCACTGTGTCGTGATGTAGCTGAGTTAAATAAGCTGTTGATGTGTATAATCGTAGCCTCCTCCCTTCCAAGAACCCGCCTGTAAACGGTTAAGTAAGCTGTTAATGTGTATAAACGTAG                   ]
[+] EMBL BI797346             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            gagtcgGGAGGAGGAAAGGA GCAGAGGGAGAAGGAAGAGAAGAAGAGGAGGGAGGAAGAAGACGG  AGGAGGAGAGAAGAGGAAGAAGAAGA CGGAGGAGGAGA GAGGAAGAGGAGGAGCAAGAGGATGGAAGAGGAGATGAGCC AAACCGAGGAGGGAAGAGGAGGAAGGAGACTGGGGAGAGCGGCAGATTCGTTTGCCCAGGAGCTTGAAAAAACGCTTCATTGGTATCAAGGGCAGGCTCTCCAGTGGCTAAGCAAGTGAGCAGAGAGGGACATTTGGAGGTGAACGCGTCCAGCTACAGTAGTTT CTGCGTAAATAATGCTGGTCTTGCTCGTGTAGAGGCCGGCCTGCATA CTACGTGCGTACTTTCGTTTCTTCCACTGTGTCGTGATGTAGCTGAGTTAAATAAGCTGTTGATGTGTATAATCGTAGCCTCCTCCCTTCCAAGAACCCGCCTGTAAACGGTTAAGTAAGCTGTTAATGTGTGTAAAaa                      ]
[+] EMBL AU181966             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAGGGAAGAGAAGAAGAGGAGGGAGGAAGAAGA GC  A GAGGAGAGAAGAGGAAGAAGAAGAGCGGAGGA GAGAGGAAGAGGAGGAGGAGCAAGAGGATGGAAGAGGAGATGAGCCAAAACCGAGGAGGGAAGAGGAGGAAGGAGACTGGGGAGAGCGGCAGATTCGTTTGCCCAGGAGCTTGAAAAAACGCTTCATCGGAATCAAGGGCAGGCTCTCCAGTGGCTAAGCAAGTGAGCAGAGAGGGACATTTGGAGGTGAACGCGTCCAGCTACAGTAGTTT CTGCGTAAATAATGCTGGTCTTGCTCGTGTAGAGGCCGGCCTGCATA CTACGTGCGTACTTTCGTTTCTTCCACTGTGTCGTGATGTAGCTGAGTTAAATAAGCTGTTGATGTGTATAATCGTAGCCTCCTCCCTTCC                                                                      ]
[+] EMBL AA753899             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ggGAA AAG GGAGGG GG AGNGGA GC    GNNGNGAGAA AGGGAGAAGA  NNCNGAGGA GAGAGGAAGAGGAGGAGG NCAAGAGGATGGAAG GGAGATGACCCAAAACCGAGGA GGAAGAGGGGGAAGGAGACTGGGGAGAGCGGCAGATTCGTTTGCCCAGGAGCTTGAAAAAACGCTTCATCGGAATCAAGGGCAGGCTCTCCAGTGGCTAAGCAAGTGAGCAGAGAGGGACATTTGGAGGTGAACGCGTCCAGCTACAGTAGTTT CTGCGTAAATAATGCTGGTCTTGCTCGTGTAGAGGCCGGCCTGCATA CTACGTGCGTACTTTCGTTTCTTCCACTGTGTCGTGATGTAGCTGAGTTAAATAAGCTGTTGATGTGTATAATCGTAGCCTCCTCCCTTCCAAGAACCCGCCTGTAAACGGTTAAGTAAGCTGTTAATGTGTATAAACGTAGCTTTCCTCTCAAAAAAAAA]
[+] EMBL AA750686             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGAAGAAGA GCGGAGGAGGAGAGAAGAGGAAGAAGAAGAGCGGAGGAGGAGA GAGGAAGAGGAGGAGCAAGAGGATGGAAGAGGAGATGAGCCAAAACCGAGGAGGGAAGAGGAGGAAGGAGACTGGGGAGAGCGGCAGATTCGTTTGCCCAGGAGCTTGAAAAAACGCTTCATTGGTATCAAGGGCAGGCTCTCCAGTGGCTAAGCAAGTAAGCAGAGAGGGA                                                                                                                                                                                                                                                     ]
[+] EMBL OSC21771             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGGAAGAAGAAGAGCGGAGGA GAGAGGAAGAGGAGGAGGAGCAAGAGGATGGAAGAGGAGATGAGCCAAAACCGAGGAGGGAAGAGGAGGAAGGAGACTNGGGAGAGCGGCAGATTCGTTTGCCCAGGAGCTTGAAAAAACGCTTCATCGGAATCAAGGGCAGGCTCTCCAGTNGCTAAGCAAGTTAGCAGAGAGGGACATTTGGAGGTGAACGCGTCCAGCTACAGTAGTTT CTGCGTAAATAATGCTGGTCTTGCTCGTNTAGAGGCCGGNCTGCATA CTACGTGCGTACTTTCGTTTCTTNCACTGTG                                                                                                                                  ]
[+] EMBL BI797006             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            agcCCAAAACCGAGGAGGGAAGAGGAGGAAGGAGACTGGGGAGA CGGCAGATTCGTTTGCCCAGGAGCTTGAAAAAACGCTTCATTGGTATCAA GGCAGGCTCTCCAGTGGCTAAGCAAGTGAGCAGAGAGGGACATTTGGAGGTG ACGCGTCCAGCTACAGTAGTTT CTGCGTAAATAATGCTGGTCTTGCTCGTGTAGAGCCCGGCCTGCATA CTACGTGCGTACTTTCGTTTCTTCCCCTGTGTCGTGATGTA CTGAGTTAAATAACCTGTTGATGTGTAAAAa                                                                                        ]
[+] EMBL AA752318             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAAAACCGAGGAGGGAAGAGGAGGAAGGAGACTGGGGAGAGCGGCAGATTCGTTTGCCCAGGAGCTTGAAAAAACGCTTCATCGGAATCAAGGGCAGGCTCTCCAGTGGCTAAGCAAGTGAGCAGAGAGGGACATTTGGAGGTGAACGCGTCCAGCTACAGTAGTTT CTGCGTAAATAATGCTGGTCTTGCTCGTGTAGAGGCCGGCCTGCATA CTACGTGCGTACTTTCGTTTCTTCCACTGTGTCGTGATGTAGCTGAGTTAAATAAGCTGTTGATGTGTATAATCGTA                                                                                    ]
[+] EMBL AA749990             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTGGGGAGAGCGGCAGATTCGTTTGCCCAGGAGCTTGAAAAAACGCTTCATTGGTATCAAGGGCAGGCTCTCCAGTGGCTAAGCAAGTGAGCAGAGAGGGACATTTGGAGGTGAACGC TCCAGGTACAGTAGTTTCCTCCGTAAATAATGCTGGTCTTCCTCGTGTAGAGGCCGG CTGCATATCTACGTGC                                                                                                                                                         ]




>consensus_11998#0
TCGCACCCCACACCGCGGGACGATCTATCGGTCAGAAAAAGCGAGCAGAGCGGTGGGGGA
GAATGGCGGTGGCGGCGGCGACGGTTCGATGGCTCGTCCTTCTCCTGGCCGTGTCGGCGG
CGGCCACGGCGTCGCGCGAGAAGTGGTGGCATGGCGCCGGCGGCGAGGCGAGTGGTGGCG
GCCACCTCGTGCAGAAGGAGTGGCGGAGGGTGGTCGCCGCGAGCGACGCTGGCCTGGTGA
CGGCCGTGGATGTCGCCGACGCGGCCGGCACCGCGTACCGGCTGCACTTCATCACGATGA
GCCCCGGGACGCTGTTCCTCCCCGTGCAGCTGCACGCCGACATGGTGTTCTACGTGCACA
GCGGGAGGGGCAAGGTGACTTACATAGAAGAAGGGGACAGTGAATCAAGTTCGCTTCAGG
TGGAGAGGGGGGACGTCTACAACTTCGATCAGGGTACCATCCTCTACATTCAGAGTAACG
CATGCGGCACGAGAGAGCGCCTTCAAATTTACGCCATCTTCACCAGCGACAGCATCAACG
CTGATGACCCAAGGCATCCGACATCAGAAGTTTATTCCTTTGTCAGTGACCTGTTGAAAG
GATTTGAAGTAGAAGTCCTTCGACCGGGCTTCGGGGTTCCACGCGAAGTTGTGGAATCCA
TCAAATCGACCAAAACCCCGCCGGCGATCATACCGTATAATCCAGAGGAGGAGGACGAGG
ACGACTCGTCAAATTGGACGGAGGAAATCACCGACGCGCTGTGGGGAGTGCGAGATCCTC
ACTTCCTGAACAAGAAGAAGAAGGACAAACAAAAGGACAAGCACAAGGGCAAGGACAAGA
AGTCCAAGAGCAAGGCCTTCAACTTCTACTCCGGCAAGCCGGACGTCGAGAACTGCTACG
GATGGAGCAGATCGATGACCAACCGAGACCTCGAGACCTTGCGGGGATCCAACATTGGCA
TGTTCATGGTGAACCTGACCACGGGCGCCATGATGGGACCTCACTGGAACCCGAGAGCGA
CCGAGATCGCCGTTGTGACCCAGGGCGCGGGGATGGTGCAGATAGTCTGTCCCAGCATCC
CGTCCGGCGAGAGCAAGAAGCATCACCACGATGAGGAGGGCGGCCGTGGCGATCACGGCC
ACGGCGGCGGCGGCGTCCGGTGCAAGAACTCGTTGTTCAGGGTGAAGGAAGGCGACGTGC
TCGTGGTGCCGCGGTTCCACCCCATGGCGCAGATATCCTTCAACAACGACTCGTTCGTGT
TCGTCGGGTTCAGCACCGACATGGGCCACAACCACCCGCAGTTCCTCGCCGGGAGGCACT
ACGTCCTGCAGGTGATCGGCAAGGAGATTCTGGCGCGGTCGCTCGGCCAGGACAACTCCA
CCAACGTCGGGAGGCTGCTGTCGTCGCAGCGCGAGTCGGCGATAATGGCGTGCACCTCCT
GCGCGGAGGAGCTGGAGAGGAAGGCGGAGGAGGAGGAAGAGGGTGGTGGAGGGAAGGGGG
AGAAAGAGCGGGAGGAGGAAGAGAGGAGGCAGCGGGAGAAAGAGGAGGAAGAAAGGAGGA
GACAAGAAGAGGAGAGGAAGAGGAGGGAAGAAGAAGAGAAGGAAAGGAGAGAGCGGGAGG
AGGAGGAAAGGAGGCAGAGGGAGAAGGAAGAGAAGAAGAGGAGGGAGGAAGAAGAGCAGA
GGAGAGAAGAGGAAGAAGAAGAGCGGAGGAGAGAGGAAGAGGAGGAGGAGCAAGAGGATG
GAAGAGGAGATGAGCCAAAACCGAGGAGGGAAGAGGAGGAAGGAGACTGGGGAGAGCGGC
AGATTCGTTTGCCCAGGAGCTTGAAAAAACGCTTCATCGGAATCAAGGGCAGGCTCTCCA
GTGGCTAAGCAAGTGAGCAGAGAGGGACATTTGGAGGTGAACGCGTCCAGCTACAGTAGT
TTCTGCGTAAATAATGCTGGTCTTGCTCGTGTAGAGGCCGGCCTGCATACTACGTGCGTA
CTTTCGTTTCTTCCACTGTGTCGTGATGTAGCTGAGTTAAATAAGCTGTTGATGTGTATA
ATCGTAGCCTCCTCCCTTCCAAGAACCCGCCTGTAAACGGTTAAGTAAGCTGTTAATGTG
TATAAACGTAGCTTTCCTCTCAAAAAAAAA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)