cluster # 12006

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Oryza sativa
cluster # 12006 cluster # 12006 Sequences # 9 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12006#0 length = 921 sequences # 6
consensus_12006#1 length = 653 sequences # 1

consensus_12006#2 length = 462 sequences # 1
consensus_12006#3 length = 366 sequences # 1

consensusID : consensus_12006#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 921
fasta sequence

                              [GGAGCTACAACACGACGACAACCTCCCGCACCCAGCTCTACCCACGTCGGGCTGCATCGATGGTCCAGAAGAGGGGTGTCGCCGGCGTGAGCCTTGCCGCCGGATCCAGTGTATCCGGCGCCACCT-CCCCCCCCCGACGTCCCTCCTGCCATGGTCCGGTAGCTCCGGCATGCAGTGCGTCCGTGCTATCTTACTCCAGCTCCTCGAGGTCCCGCAATGCCCAGATCTAGGGGAGACGAGAGTGGGACGAACGACGATGGTAAGCGGGGCTGCAGAGCCCTTCCTCTCGCAGCTTTCCTGTTGTCGGACGACGTCCACGACGAAGGCGAATTTGCTGGGGGCCGATTGATCCCCACCACAACATCTTTGCTGGTTCCTAGCGGTTCAAGAGCTGCTATAGCCGTTGACCTTGGTGGTTCCGAGCAGAGGATGGCTGCCTGGCAATCTGGAAGCTGCTCTCCATCCGCCGCCCGCCCCTACAACCCGAGATGCAGGCCTTGTGCGATCGAGATGCTTGATTTGGATCTGCTGCTTTATGCCTTTTTAGGCTTGATCTTTGCATCTGTTTGGGATGATCCAAGAAACCGTTTGGTCGTTTTGGCCAGCAGAAAATTTCCGGCAGCTGAGGGAAGAAGCGATCTGCATCCTGTGCTTGTGATGAGAGGGACATGTTCATCTGAAGCATCTGCATCTTACCATCTGTTATCTATGTTTTGTATTTTGAG-TTTTTTTTACCAAGGTCGTCTCTTTTGTTTCGTAGCAGACAATGGTGAAGACGCACCTGTAGTAGTTCTTCATATTTTTCTGTTCTTAAGGTCTTCGTCAACTAGTATTTCATTTCATGTTTCCGTGATATGAAACGTGGAGTTCCTCCTATAAAAAAAAAAAAAAAAACACTTGTCATGCCGTTACGTAGCGTAT]

[+] EMBL CF293980             [GGAGCTACAACACGACGACAACCTCCCGCACCCAGCTCTACCCACGTCGGGCTGCATCGATGGTCCAGAAGAGGGGTGTCGCCGGCGTGAGCCTTGCCGCCGGATCCAGTGTATCCGGCGCCACCT CCCCCCCCCGACGTCCCTCCTGCCATGGTCCGGTAGCTCCGGCATGCAGTGCGTCCGTGCTATCTTACTCCAGCTCCTCGAGGTCCCGCAATGCCCAGATCTAGGGGAGACGAGAGTGGGACGAACGACGATGGTAAGCGGGGCTGCAGAGCCCTTCCTCTCGCAGCTTTCCTGTTGTCGGACGACGTCCACGACGAAGGCGAATTTGCTGGGGGCCGATTGATCCCCACCACAACATCTTTGCTGGTTCCTAGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK069871             [                                                         CGATGGTCCAGAAGAGGGGTGTCGCCGGCGTGAGCCTTGCCGCCGGATCCAGTGTATCCGGCGCCACCTCCCCCCCCCCGACGTCCCTCCTGCCATGGTCCGGTAGCTCCGGCATGCAGTGCGTCCGTGCTATCTTACTCCAGCTCCTCGAGGTCCCGCAATGCCCAGATCTAGGGGAGACGAGAGTGGGACGAACGACGATGGTAAGCGGGGCTGCAGAGCCCTTCCTCTCGCAGCTTTCCTGTTGTCGGACGACGTCCACGACGAAGGCGAATTTGCTGGGGGCCGATTGATCCCCACCACAACATCTTTGCTGGTTCCTAGCGGTTCAAGAGCTGCTATAGCCGTTGACCTTGGTGGTTCCGAGCAGAGGATGGCTGCCTGGCAATCTGGAAGCTGCTCTCCATCCGCCGCCCGCCCCTACAACCCGAGATGCAGGCCTTGTGCGATTGAGATGCTTGATTTGGATCTGCTGCTTTATGCCTTTTTAGGCTTGATCTTTGCATCTGTTTGGGATGATCCAAGAAACCGTTTGGTCGTTTTGGCCAGCAGAAAATTTCCGGCAGCTGAGGGAAGAAGCGATCTGCATCCTGTGCTTGTGATGAGAGGGACATGTTCATCTGAAGCATCTGCATCTTACCATCTGTTATCTATGTTTTGTATTTTGAGTTTTTTTTTACCAAGGTCGTCTCTTTTGTTTCGTAGCAGACAATGGTGAAGACGCACCTGTAGTAGTTCTTCATATTTTTCTGTTCTTAAGGTCTTCGTCAACTAGTATTTCATTTCATGTTTCCGTGATATGAAACGTGGAGTTCCTCCTAT                                            ]
[+] EMBL CF295788             [                                                           ATGGTCCATAAGAGGGGTGTCGCCGGCGTGAGCCTTGCCGCCGGATCCAGTGTATCCGGCGCCACCT CCCCCCCCCGACGTCCCTCCTGCCATGGTCCGGTAGCTCCGGCATGCAGTGCGTCCGTGCTATCTTACTCTTTCTCCTCGAGGTCCCGCAATGCTCAGATCTAGGGGAGACGAGAGTGGGACGAACGACGATGGTAAGCGGGGCTGCAGAGCCCTTCCTCTCGCAGCTTTCCTGTTGTCGGACGACGTCCACGACGAAGGCGAATTTGCTGGGGGCCGATTGATCCCCACCACAACATCTTTGCTGGTTCCTAGCGGTTCAAGAGCTGCTATAGCCGTTGACCTTGGTGGTTCCGAGCAGAGGATGGCTGCCTGGCAATCTGGAAGCTGCTCTCCATCCGCCGCCCGCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF280898             [                                                                                  CGGCGTGAGCCTTGCCGCCGGATCCAGTGTATCCGGCGCCACCT CCCCCCCCCGACGTCCCTCCTGCCATGGTCCGGTAGCTCCGGCATGCAGTGCGTCCGTGCTATCTTACTCCTTTTTCTCGAGGTCCCGCAATGCCCATATCTAGGGGAGACGAGAGT TTTTTAACGACGATGGTAAGCGGGGCTGCAGAGCCCTTCCTCTCGCAGCTTTCCTGTTGTCGGACGACGTCCACGACGAAGGCGAATTTGCTGGGGGCCGATTGACCCCCACCACAACATCTTTGCTGGTTCCTAGCGGTTCAAGAGCTGCTATAGCCGTTGACCTTGGTGGTTCCGAGCAGAGGATGGCTGCCTGGCAATCTGGAAGCTGCTCTCCATCCGCCGCCCGCCCCTACAACCCGAGATGCAGGCCTTGTGCGATCGAGATGCTTGATTTGGATCTGCTGCTTTATGCCTTTTTAGGCTTGATCTTTGCATCTGTTTGGGATGATCCAAGAAACCGTTT                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CA764771             [                                                                                                                                                                                                                                                  GTGGGACGAACGACGATGGTAAGCGGGGCTGCAGAGCCCTTCCTCTCGCAGCTTTCCTGTTGTCGGACGACGTCCACGACGAAGGCGAATTTGCTGGGGGCCGATTGATCCCCACCACAACATCTTTGCTGGTTCCTAGCGGTTCAAGAGCTGCTATAGCCGTTGACCTTGGTGGTTCCGAGCAGAGGATGGCTGCCTGGCAATCTGGAAGCTGCTCTCCATCCGCCGCCCGCCCCTACAACCCGAGATGCAGGCCTTGTGCGATCGAGATGCTTGATTTGGATCTGCTGCTTTATGCCTTTTTAGGCTTGATCTTTGCATCTGTTTGGGATGATCCAAGAAACCGTTTGGTCGTTTTGGCCAGCAGAAAATTTCCGGCAGCTGAGGGAAGAAGCGATCTGCATCCTGTGCTTGTGATGAGAGGGACATGTTCATCTGAAGCATCTGCATCTTACCATCTGTTATCTATGTTTTGTATTTTGAG TTTTTTTTACCAAGGTCGTCTCTTTTGTTTCGTAGCAGACAATGGTGAAGACGCACCTGTAGTAGTTCTTCATATTTTTCTGTTCTTAAGGTCTTCGTCAACTAGTA                                                                                         ]
[-] EMBL CF280897             [                                                                                                                                                                                                                                                                                                                                                                                                TTCAAGAGCTGCTATAGCCGTTGACCTTGGTGGTTCCGAGCAGAGGATGGCTGCCTGGCAATCTGGAAGCTGCTCTCCATCCGCCGCCCGCCCCTACAACCCGAGATGCAGGCCTTGTGCGATCGAGATGCTTGATTTGGATCTGCTGCTTTATGCCTTTTTAGGCTTGATCTTTGCATCTGTTTGGGATGATCCAAGAAACCGTTTGGTCGTTTTGGCCAGCAGAAAATTTCCGGCAGCTGAGGGAAGAAGCGATCTGCATCCTGTGCTTGTGATGAGAGGGACATGTTCATCTGAAGCATCTGCATCTTACCATCTGTTATCTATGTTTTGTATTTTGAG TTTTTTTTACCAAGGTCGTCTCTTTTGTTTCGTAGCAGACAATGGTGAAGACGCACCTGTAGTAGTTCTTCATATTTTTCTGTTCTTAAGGTCTTCGTCAACTAGTATTTCATTTCATGTTCCCGTGATATGAAACGTGGAGTTCCTCCTAAAAAAAAAAAAAAAAAAACACTTGTCATGCCGTTACGTAGCGTAT]




>consensus_12006#0
GGAGCTACAACACGACGACAACCTCCCGCACCCAGCTCTACCCACGTCGGGCTGCATCGA
TGGTCCAGAAGAGGGGTGTCGCCGGCGTGAGCCTTGCCGCCGGATCCAGTGTATCCGGCG
CCACCTCCCCCCCCCGACGTCCCTCCTGCCATGGTCCGGTAGCTCCGGCATGCAGTGCGT
CCGTGCTATCTTACTCCAGCTCCTCGAGGTCCCGCAATGCCCAGATCTAGGGGAGACGAG
AGTGGGACGAACGACGATGGTAAGCGGGGCTGCAGAGCCCTTCCTCTCGCAGCTTTCCTG
TTGTCGGACGACGTCCACGACGAAGGCGAATTTGCTGGGGGCCGATTGATCCCCACCACA
ACATCTTTGCTGGTTCCTAGCGGTTCAAGAGCTGCTATAGCCGTTGACCTTGGTGGTTCC
GAGCAGAGGATGGCTGCCTGGCAATCTGGAAGCTGCTCTCCATCCGCCGCCCGCCCCTAC
AACCCGAGATGCAGGCCTTGTGCGATCGAGATGCTTGATTTGGATCTGCTGCTTTATGCC
TTTTTAGGCTTGATCTTTGCATCTGTTTGGGATGATCCAAGAAACCGTTTGGTCGTTTTG
GCCAGCAGAAAATTTCCGGCAGCTGAGGGAAGAAGCGATCTGCATCCTGTGCTTGTGATG
AGAGGGACATGTTCATCTGAAGCATCTGCATCTTACCATCTGTTATCTATGTTTTGTATT
TTGAGTTTTTTTTACCAAGGTCGTCTCTTTTGTTTCGTAGCAGACAATGGTGAAGACGCA
CCTGTAGTAGTTCTTCATATTTTTCTGTTCTTAAGGTCTTCGTCAACTAGTATTTCATTT
CATGTTTCCGTGATATGAAACGTGGAGTTCCTCCTATAAAAAAAAAAAAAAAAACACTTG
TCATGCCGTTACGTAGCGTAT

consensusID : consensus_12006#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 653
fasta sequence

                              [TTGGTAAGCGGGGCTGCAGAGCCCTTCCTCTCGCAGCTTTCCTGTTGTCGGACGACGTCCACGACGAAGGCGAATTTGCTGGGGGCCGATTGATCCCCACCCACAACATCTTTGCTGGTTCCAAGCGGTTCAAGAGCTGCTATAGCCGTTGACCTTGGTGGTTCCGAGCAGAGGATGGCTGCCTGGCAATTTGGAAGTTGCTTTCCATCCGCCGCCCGCCCCTACAACCCGAGATGCAGGCCTTGTGCGATCGAGATGCTTGATTTGGATTTGCTGCTTTATGCCTTTTTAGGCTTGATCTTTGCATCTGTTTGGGATGATCCAAGAAACCGTTTGGTCGTTTTGGCCAGCAGAAAATTTCCGGCAGTTGAGGGAAAAAGCGATTTGCATCCTGTGCTTGTGATGAGAGGGACATGTTCATTTGAAGCATTTGCATCTTACCATCTGTAATCTATGTTTGGTATTTTGAGTTTTTTTTACCAAGGTGGTCTCTTTTGTTTTGTAGCAGCCAATGGTGAAGACGCCCCGGTAGTAGTTTTTCATATTTTTCTGTTTTTAAGGTTTTCGTCAACTAGTATTTCATTTCATGTTTCCGTGATATGAAACGTGGAGTTCCTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA760977             [TTGGTAAGCGGGGCTGCAGAGCCCTTCCTCTCGCAGCTTTCCTGTTGTCGGACGACGTCCACGACGAAGGCGAATTTGCTGGGGGCCGATTGATCCCCACCCACAACATCTTTGCTGGTTCCAAGCGGTTCAAGAGCTGCTATAGCCGTTGACCTTGGTGGTTCCGAGCAGAGGATGGCTGCCTGGCAATTTGGAAGTTGCTTTCCATCCGCCGCCCGCCCCTACAACCCGAGATGCAGGCCTTGTGCGATCGAGATGCTTGATTTGGATTTGCTGCTTTATGCCTTTTTAGGCTTGATCTTTGCATCTGTTTGGGATGATCCAAGAAACCGTTTGGTCGTTTTGGCCAGCAGAAAATTTCCGGCAGTTGAGGGAAAAAGCGATTTGCATCCTGTGCTTGTGATGAGAGGGACATGTTCATTTGAAGCATTTGCATCTTACCATCTGTAATCTATGTTTGGTATTTTGAGTTTTTTTTACCAAGGTGGTCTCTTTTGTTTTGTAGCAGCCAATGGTGAAGACGCCCCGGTAGTAGTTTTTCATATTTTTCTGTTTTTAAGGTTTTCGTCAACTAGTATTTCATTTCATGTTTCCGTGATATGAAACGTGGAGTTCCTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_12006#1
TTGGTAAGCGGGGCTGCAGAGCCCTTCCTCTCGCAGCTTTCCTGTTGTCGGACGACGTCC
ACGACGAAGGCGAATTTGCTGGGGGCCGATTGATCCCCACCCACAACATCTTTGCTGGTT
CCAAGCGGTTCAAGAGCTGCTATAGCCGTTGACCTTGGTGGTTCCGAGCAGAGGATGGCT
GCCTGGCAATTTGGAAGTTGCTTTCCATCCGCCGCCCGCCCCTACAACCCGAGATGCAGG
CCTTGTGCGATCGAGATGCTTGATTTGGATTTGCTGCTTTATGCCTTTTTAGGCTTGATC
TTTGCATCTGTTTGGGATGATCCAAGAAACCGTTTGGTCGTTTTGGCCAGCAGAAAATTT
CCGGCAGTTGAGGGAAAAAGCGATTTGCATCCTGTGCTTGTGATGAGAGGGACATGTTCA
TTTGAAGCATTTGCATCTTACCATCTGTAATCTATGTTTGGTATTTTGAGTTTTTTTTAC
CAAGGTGGTCTCTTTTGTTTTGTAGCAGCCAATGGTGAAGACGCCCCGGTAGTAGTTTTT
CATATTTTTCTGTTTTTAAGGTTTTCGTCAACTAGTATTTCATTTCATGTTTCCGTGATA
TGAAACGTGGAGTTCCTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_12006#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 462
fasta sequence

                              [GGTGGTTCCGAGCAAAGGATGGCTGCCTGGCAATTTGGAAGGTGGTTTCCATCCGCCGGCCGCCCCTACAACCCGAGATGCAGGCCTTGTGCGATCGAGAAGCTTGATTTGGATTTGCTGCTTTATGCCTTTTTAGGCTTGATCTTTGCATCTGTTTGGGATGATCCAAGAAACCGTTTGGTTGTTTTGGCCAGCAGAAAATTTCCGGCAGCTGAGGGAAAAAGCGATTTGCATCCTGTGCTTGTGATGAGAGGGACATGTTCATTTGAAGCATTTGCATTTTACCATCTGTTATCTATGTTTTGGATTTTGAGTTTTTTTTACCAAGGTCGTTTTTTTTGTTTTGTAGCAGACAATGGTGAAGACGCCCCCGTAGTAGTTTTTCATATTTTTCTGTTTTTAAGGTTTTCGTCAACTAGTATTTCATTTCATGTTTCCGTGATATGAAAAAAAAAAAAAAAA]

[-] EMBL CF293979             [GGTGGTTCCGAGCAAAGGATGGCTGCCTGGCAATTTGGAAGGTGGTTTCCATCCGCCGGCCGCCCCTACAACCCGAGATGCAGGCCTTGTGCGATCGAGAAGCTTGATTTGGATTTGCTGCTTTATGCCTTTTTAGGCTTGATCTTTGCATCTGTTTGGGATGATCCAAGAAACCGTTTGGTTGTTTTGGCCAGCAGAAAATTTCCGGCAGCTGAGGGAAAAAGCGATTTGCATCCTGTGCTTGTGATGAGAGGGACATGTTCATTTGAAGCATTTGCATTTTACCATCTGTTATCTATGTTTTGGATTTTGAGTTTTTTTTACCAAGGTCGTTTTTTTTGTTTTGTAGCAGACAATGGTGAAGACGCCCCCGTAGTAGTTTTTCATATTTTTCTGTTTTTAAGGTTTTCGTCAACTAGTATTTCATTTCATGTTTCCGTGATATGAAAAAAAAAAAAAAAA]




>consensus_12006#2
GGTGGTTCCGAGCAAAGGATGGCTGCCTGGCAATTTGGAAGGTGGTTTCCATCCGCCGGC
CGCCCCTACAACCCGAGATGCAGGCCTTGTGCGATCGAGAAGCTTGATTTGGATTTGCTG
CTTTATGCCTTTTTAGGCTTGATCTTTGCATCTGTTTGGGATGATCCAAGAAACCGTTTG
GTTGTTTTGGCCAGCAGAAAATTTCCGGCAGCTGAGGGAAAAAGCGATTTGCATCCTGTG
CTTGTGATGAGAGGGACATGTTCATTTGAAGCATTTGCATTTTACCATCTGTTATCTATG
TTTTGGATTTTGAGTTTTTTTTACCAAGGTCGTTTTTTTTGTTTTGTAGCAGACAATGGT
GAAGACGCCCCCGTAGTAGTTTTTCATATTTTTCTGTTTTTAAGGTTTTCGTCAACTAGT
ATTTCATTTCATGTTTCCGTGATATGAAAAAAAAAAAAAAAA

consensusID : consensus_12006#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 366
fasta sequence

                              [TTGGCCAGCAGAAAATTTCCGGCAGCTGAGGGAAGAAGCGATCTGCATCCTGTGCTTGTGATGAGAGGGACATGTTCATCTGAAGCATCTGCATCTTACCATCTGTTATCTATGTTTTGTATTTTGAGTTTTTTNNNTTACCCAAAGGTCGTCTCTTTTGTTTCGTAGCAGACAATGGTGAAGACGCACCTGTAGTAGTTCTTCATATTTTTCTGTTCTTAAGGTCTTCGTCAACTAGTATTTCATTTCATGTTTCCGTGATATGAAACGTGGAGTTCCTCCTATACCTTGACTTATACTTTGAATTTCTGAAGATTTTAGCTCCTTTGGGGGCAGTATTGCTTTGAGCATATTAGCTCCAAAAAA]

[-] EMBL CF295787             [TTGGCCAGCAGAAAATTTCCGGCAGCTGAGGGAAGAAGCGATCTGCATCCTGTGCTTGTGATGAGAGGGACATGTTCATCTGAAGCATCTGCATCTTACCATCTGTTATCTATGTTTTGTATTTTGAGTTTTTTNNNTTACCCAAAGGTCGTCTCTTTTGTTTCGTAGCAGACAATGGTGAAGACGCACCTGTAGTAGTTCTTCATATTTTTCTGTTCTTAAGGTCTTCGTCAACTAGTATTTCATTTCATGTTTCCGTGATATGAAACGTGGAGTTCCTCCTATACCTTGACTTATACTTTGAATTTCTGAAGATTTTAGCTCCTTTGGGGGCAGTATTGCTTTGAGCATATTAGCTCCAAAAAA]




>consensus_12006#3
TTGGCCAGCAGAAAATTTCCGGCAGCTGAGGGAAGAAGCGATCTGCATCCTGTGCTTGTG
ATGAGAGGGACATGTTCATCTGAAGCATCTGCATCTTACCATCTGTTATCTATGTTTTGT
ATTTTGAGTTTTTTNNNTTACCCAAAGGTCGTCTCTTTTGTTTCGTAGCAGACAATGGTG
AAGACGCACCTGTAGTAGTTCTTCATATTTTTCTGTTCTTAAGGTCTTCGTCAACTAGTA
TTTCATTTCATGTTTCCGTGATATGAAACGTGGAGTTCCTCCTATACCTTGACTTATACT
TTGAATTTCTGAAGATTTTAGCTCCTTTGGGGGCAGTATTGCTTTGAGCATATTAGCTCC
AAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12006#1      ------------------------------------------------------------
consensus_12006#2      ------------------------------------------------------------
consensus_12006#0      GGAGCTACAACACGACGACAACCTCCCGCACCCAGCTCTACCCACGTCGGGCTGCATCGA 60
consensus_12006#3      ------------------------------------------------------------
                                                                                   

consensus_12006#1      ------------------------------------------------------------
consensus_12006#2      ------------------------------------------------------------
consensus_12006#0      TGGTCCAGAAGAGGGGTGTCGCCGGCGTGAGCCTTGCCGCCGGATCCAGTGTATCCGGCG 120
consensus_12006#3      ------------------------------------------------------------
                                                                                   

consensus_12006#1      ------------------------------------------------------------
consensus_12006#2      ------------------------------------------------------------
consensus_12006#0      CCACCTCCCCCCCCCGACGTCCCTCCTGCCATGGTCCGGTAGCTCCGGCATGCAGTGCGT 180
consensus_12006#3      ------------------------------------------------------------
                                                                                   

consensus_12006#1      ------------------------------------------------------------
consensus_12006#2      ------------------------------------------------------------
consensus_12006#0      CCGTGCTATCTTACTCCAGCTCCTCGAGGTCCCGCAATGCCCAGATCTAGGGGAGACGAG 240
consensus_12006#3      ------------------------------------------------------------
                                                                                   

consensus_12006#1      ----------------TTGGTAAGCGGGGCTGCAGAGCCCTTCCTCTCGCAGCTTTCCTG 44
consensus_12006#2      ------------------------------------------------------------
consensus_12006#0      AGTGGGACGAACGACGATGGTAAGCGGGGCTGCAGAGCCCTTCCTCTCGCAGCTTTCCTG 300
consensus_12006#3      ------------------------------------------------------------
                                                                                   

consensus_12006#1      TTGTCGGACGACGTCCACGACGAAGGCGAATTTGCTGGGGGCCGATTGATCCCCACCCAC 104
consensus_12006#2      ------------------------------------------------------------
consensus_12006#0      TTGTCGGACGACGTCCACGACGAAGGCGAATTTGCTGGGGGCCGATTGATCCCCACC-AC 359
consensus_12006#3      ------------------------------------------------------------
                                                                                   

consensus_12006#1      AACATCTTTGCTGGTTCCAAGCGGTTCAAGAGCTGCTATAGCCGTTGACCTTGGTGGTTC 164
consensus_12006#2      ----------------------------------------------------GGTGGTTC 8
consensus_12006#0      AACATCTTTGCTGGTTCCTAGCGGTTCAAGAGCTGCTATAGCCGTTGACCTTGGTGGTTC 419
consensus_12006#3      ------------------------------------------------------------
                                                                                   

consensus_12006#1      CGAGCAGAGGATGGCTGCCTGGCAATTTGGAAGTTGCTTTCCATCCGCCGCCCGCCCCTA 224
consensus_12006#2      CGAGCAAAGGATGGCTGCCTGGCAATTTGGAAGGTGGTTTCCATCCGCCGGCCGCCCCTA 68
consensus_12006#0      CGAGCAGAGGATGGCTGCCTGGCAATCTGGAAGCTGCTCTCCATCCGCCGCCCGCCCCTA 479
consensus_12006#3      ------------------------------------------------------------
                                                                                   

consensus_12006#1      CAACCCGAGATGCAGGCCTTGTGCGATCGAGATGCTTGATTTGGATTTGCTGCTTTATGC 284
consensus_12006#2      CAACCCGAGATGCAGGCCTTGTGCGATCGAGAAGCTTGATTTGGATTTGCTGCTTTATGC 128
consensus_12006#0      CAACCCGAGATGCAGGCCTTGTGCGATCGAGATGCTTGATTTGGATCTGCTGCTTTATGC 539
consensus_12006#3      ------------------------------------------------------------
                                                                                   

consensus_12006#1      CTTTTTAGGCTTGATCTTTGCATCTGTTTGGGATGATCCAAGAAACCGTTTGGTCGTTTT 344
consensus_12006#2      CTTTTTAGGCTTGATCTTTGCATCTGTTTGGGATGATCCAAGAAACCGTTTGGTTGTTTT 188
consensus_12006#0      CTTTTTAGGCTTGATCTTTGCATCTGTTTGGGATGATCCAAGAAACCGTTTGGTCGTTTT 599
consensus_12006#3      ----------------------------------------------------------TT 2
                                                                                 **

consensus_12006#1      GGCCAGCAGAAAATTTCCGGCAGTTGAGGGAAAAAGCGATTTGCATCCTGTGCTTGTGAT 404
consensus_12006#2      GGCCAGCAGAAAATTTCCGGCAGCTGAGGGAAAAAGCGATTTGCATCCTGTGCTTGTGAT 248
consensus_12006#0      GGCCAGCAGAAAATTTCCGGCAGCTGAGGGAAGAAGCGATCTGCATCCTGTGCTTGTGAT 659
consensus_12006#3      GGCCAGCAGAAAATTTCCGGCAGCTGAGGGAAGAAGCGATCTGCATCCTGTGCTTGTGAT 62
                       *********************** ******** ******* *******************

consensus_12006#1      GAGAGGGACATGTTCATTTGAAGCATTTGCATCTTACCATCTGTAATCTATGTTTGGTAT 464
consensus_12006#2      GAGAGGGACATGTTCATTTGAAGCATTTGCATTTTACCATCTGTTATCTATGTTTTGGAT 308
consensus_12006#0      GAGAGGGACATGTTCATCTGAAGCATCTGCATCTTACCATCTGTTATCTATGTTTTGTAT 719
consensus_12006#3      GAGAGGGACATGTTCATCTGAAGCATCTGCATCTTACCATCTGTTATCTATGTTTTGTAT 122
                       ***************** ******** ***** *********** ********** * **

consensus_12006#1      TTTGAGTTTTTTTTACCA-----AGGTGGTCTCTTTTGTTTTGTAGCAGCCAATGGTGAA 519
consensus_12006#2      TTTGAGTTTTTTTTACCA-----AGGTCGTTTTTTTTGTTTTGTAGCAGACAATGGTGAA 363
consensus_12006#0      TTTGAGTTTTTTTTACCA-----AGGTCGTCTCTTTTGTTTCGTAGCAGACAATGGTGAA 774
consensus_12006#3      TTTGAGTTTTTTNNNTTACCCAAAGGTCGTCTCTTTTGTTTCGTAGCAGACAATGGTGAA 182
                       ************     *     **** ** * ******** ******* **********

consensus_12006#1      GACGCCCCGGTAGTAGTTTTTCATATTTTTCTGTTTTTAAGGTTTTCGTCAACTAGTATT 579
consensus_12006#2      GACGCCCCCGTAGTAGTTTTTCATATTTTTCTGTTTTTAAGGTTTTCGTCAACTAGTATT 423
consensus_12006#0      GACGCACCTGTAGTAGTTCTTCATATTTTTCTGTTCTTAAGGTCTTCGTCAACTAGTATT 834
consensus_12006#3      GACGCACCTGTAGTAGTTCTTCATATTTTTCTGTTCTTAAGGTCTTCGTCAACTAGTATT 242
                       ***** ** ********* **************** ******* ****************

consensus_12006#1      TCATTTCATGTTTCCGTGATATGAAACGTGGAGTTCCTCCTAAAAAAAAAAAAAAAAAAA 639
consensus_12006#2      TCATTTCATGTTTCCGTGATATGAAA---------------AAAAAAAAAAAAA------ 462
consensus_12006#0      TCATTTCATGTTTCCGTGATATGAAACGTGGAGTTCCTCCTATAAAAAAAAAAAAAAAAA 894
consensus_12006#3      TCATTTCATGTTTCCGTGATATGAAACGTGGAGTTCCTCCTATACCTTGACTTATACTTT 302
                       **************************               * *     *   *      

consensus_12006#1      AAAAAAAAAAAAAA---------------------------------------------- 653
consensus_12006#2      ------------------------------------------------------------
consensus_12006#0      CACTTGTCATGCCGTTACGTAGCGTAT--------------------------------- 921
consensus_12006#3      GAATTTCTGAAGATTTTAGCTCCTTTGGGGGCAGTATTGCTTTGAGCATATTAGCTCCAA 362
                                                                                   

consensus_12006#1      ----
consensus_12006#2      ----
consensus_12006#0      ----
consensus_12006#3      AAAA 366