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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12019#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2369 fasta sequence
[GAGCCAACCCCGCCCCGCGCCGCCCCGCCGCGGCCGCGTCGTCTCCTCCGCCACCTCCACGTCTAGGGTTCCCCTCCGCCGTCAGCATTGCCCGCCGGAGCTTCTGGTTAGTATTGAGTGGAATTCAGCTGATGGAACTACTAAAGATTCCCTTTAAGGGTGTCGTCGCTGATATCGAAGGCCGAGCAGCTTGGTACAAGCATGATTGGCTTGAGGGATTCCACTCTGGCTTCAGGATATTGGCACCTACTATGTATATATTTTTTGCCTCTGCCCTCCCAGTCATAGCCTTCGGAACGCAACTGAGCAGAGAAACAAATGGTATACTCACCACAGTAGAAACACTGGCATCTACTGCAATATGTGGCATCATCCATTCCATTCTTGGAGGGCAGCCTCTGTTGATAGTTGGAGTTGCAGAGCCAACTATAATCATGTACACGTATCTCTACAACTTTGCCAAGAACCAGCAAGCTCTGGGGGAACGACTGTATTTAGCATGGGCTGGATGGGTCTGCATCTGGACTGCGATCATGTTGTTTCTTCTGGCAATGTTCAATGCTTCTAATGTTATTAGCAGGTTTACAAGGGTTGCAGGAGAACTTTTCGGGATGTTGATCACTGTTCTGTTCCTGCAACAAGCTATTAAAGGAATTATAGAAGAATTCAAGGTACCTGGAGGTGTCGACCATAGTTCACCTATATATCGATTCCAGTGGTTGTATGTCAACGGCCTACTTGGTGTAATCTTTTCAATTGGGCTGTTATACACTGCATTAAGGTCAAGAAGGGCAAGGTCATGGGTGTATGGTCAAGGGTGGCTCAGAGGCTTCATTTCTGATTATGGTGTCCCACTTATGGTGATTGTTTGGACAGCATTATCGTACGCATTACCAAAGGATGTTCCTTCAGGAGTTCCTAGGAGGCTGTTCAGTCCACTTCCCTGGGAGTCAAGTTCACTGCATCACTGGACCATAGCAAAGGACCTGTTTTCTGTTCCCCCAGCATACATATTTGCTGCCATTCTGCCAGCTTTGATGATTGCAGGACTTTACTTCTTTGATCATAGCGTGGCTTCACAATTGGCGCAACAAAAGGAGTTTAACTTGAAGAAGCCCTCTGCTTACCATTATGACATTTTGGTCCTCGGATTCATGGTCCTGCTTTGTGGTTTGATTGGCATCCCTCCATCTAATGGAGTACTTCCTCAGTCCCCGATGCATACAAGAAGCCTTGCTGTCCTTAAGGGGCAGCTGCTACGCAAAAAGATGGTTCAAACTGCCAACGAAGGCCTGATGAATCGTGCTAGCAGTTTGGAAATCTATGGCAAGATGCAAGGGGTTTTCATTGAGATGGACTGTGAAAAAAATACTGATTCTGTTGACAAGGAGTTAAAGAGCTTGAAGGATGCTATGCTGCAAGAAGGTGATAAAGAAGGGACATTGGCTGAAGAATTTGACCCTATAAAACATATTGAAGCACATTTGCCTGTTCGAGTGAATGAGCAGAGACTAAGTAACTTGCTGCAATCCTTATTAGTTGGTGCTTGTGTTGGAGCTATGCCAGTCATCAAGATGATACCGACATCGGTCCTCTGGGGTTACTTTGCTTATATGGCCATTGACAGTCTACCTGGCAACCAGTTTTGGGAAAGAATAAGACTTATATTCATCCCATCAAGCCGACGCTACAAGGTTTTGGAGGGTCCCCATGCGTCTTTCATGGAGTCAGTGCCTTCAAAAACAATTACTGTCTTCACGATCTTCCAGTTGGTTTACCTCTTGATATGCTTCGGCATAACATGGATACCAATAGCAGGGATCCTGTTCCCGTTGCCATTCTTCCTTATGATTCTTATCAGGCAGCATGTCCTCCCAAAGTTTTTTGAGCCAAATGACCTTCGGGAATTGGATGCAGCTGAGTATGAAGAGCTTGAAGGTGTCCACCACGATCACACGCTGGAGGATGGTGCATCTGATTCAGAAAGCTGTGGCAGCCGTGACGATGCCGAGATATTAGATGAGCTGACAACTAACCGTGGAGAGCTAAAGCACAGAACTTTCAACCACCGTGAAGAAAGGCACCCGCAGGCGCATACAAAAGCCGTTCAGCCCAGGTGTGGAGATACAGAAAACTGGTCCGAGTGCTAAAGAATTTCGGCTTACTGTCGGATGGGTATACGATAGGCATATATAGCACTTCCTCATACATTCCTACTTTCCTATACATCGCACTGTAGCAGGAGATCGGCGGCCGTATGATATGATATGCTTGTCAGTTGTCACATTGTGCATGGAGTAAACAGAAGCAACTGGATTTTACGATGTTCTCTAGCCTGTGAAATGTTGCTCCTTGAAAAAAAAAGCGGC]
[+] EMBL AK072421 [GAGCCAACCCCGCCCCGCGCCGCCCCGCCGCGGCCGCGTCGTCTCCTCCGCCACCTCCACGTCTAGGGTTCCCCTCCGCCGTCAGCATTGCCCGCCGGAGCTTCTGGTTAGTATTGAGTGGAATTCAGCTGATGGAACTACTAAAGATTCCCTTTAAGGGTGTCGTCGCTGATATCGAAGGCCGAGCAGCTTGGTACAAGCATGATTGGCTTGAGGGATTCCACTCTGGCTTCAGGATATTGGCACCTACTATGTATATATTTTTTGCCTCTGCCCTCCCAGTCATAGCCTTCGGAACGCAACTGAGCAGAGAAACAAATGGTATACTCACCACAGTAGAAACACTGGCATCTACTGCAATATGTGGCATCATCCATTCCATTCTTGGAGGGCAGCCTCTGTTGATAGTTGGAGTTGCAGAGCCAACTATAATCATGTACACGTATCTCTACAACTTTGCCAAGAACCAGCAAGCTCTGGGGGAACGACTGTATTTAGCATGGGCTGGATGGGTCTGCATCTGGACTGCGATCATGTTGTTTCTTCTGGCAATGTTCAATGCTTCTAATGTTATTAGCAGGTTTACAAGGGTTGCAGGAGAACTTTTCGGGATGTTGATCACTGTTCTGTTCCTGCAACAAGCTATTAAAGGAATTATAGAAGAATTCAAGGTACCTGGAGGTGTCGACCATAGTTCACCTATATATCGATTCCAGTGGTTGTATGTCAACGGCCTACTTGGTGTAATCTTTTCAATTGGGCTGTTATACACTGCATTAAGGTCAAGAAGGGCAAGGTCATGGGTGTATGGTCAAGGGTGGCTCAGAGGCTTCATTTCTGATTATGGTGTCCCACTTATGGTGATTGTTTGGACAGCATTATCGTACGCATTACCAAAGGATGTTCCTTCAGGAGTTCCTAGGAGGCTGTTCAGTCCACTTCCCTGGGAGTCAAGTTCACTGCATCACTGGACCATAGCAAAGGACCTGTTTTCTGTTCCCCCAGCATACATATTTGCTGCCATTCTGCCAGCTTTGATGATTGCAGGACTTTACTTCTTTGATCATAGCGTGGCTTCACAATTGGCGCAACAAAAGGAGTTTAACTTGAAGAAGCCCTCTGCTTACCATTATGACATTTTGGTCCTCGGATTCATGGTCCTGCTTTGTGGTTTGATTGGCATCCCTCCATCTAATGGAGTACTTCCTCAGTCCCCGATGCATACAAGAAGCCTTGCTGTCCTTAAGGGGCAGCTGCTACGCAAAAAGATGGTTCAAACTGCCAACGAAGGCCTGATGAATCGTGCTAGCAGTTTGGAAATCTATGGCAAGATGCAAGGGGTTTTCATTGAGATGGACTGTGAAAAAAATACTGATTCTGTTGACAAGGAGTTAAAGAGCTTGAAGGATGCTATGCTGCAAGAAGGTGATAAAGAAGGGACATTGGCTGAAGAATTTGACCCTATAAAACATATTGAAGCACATTTGCCTGTTCGAGTGAATGAGCAGAGACTAAGTAACTTGCTGCAATCCTTATTAGTTGGTGCTTGTGTTGGAGCTATGCCAGTCATCAAGATGATACCGACATCGGTCCTCTGGGGTTACTTTGCTTATATGGCCATTGACAGTCTACCTGGCAACCAGTTTTGGGAAAGAATAAGACTTATATTCATCCCATCAAGCCGACGCTACAAGGTTTTGGAGGGTCCCCATGCGTCTTTCATGGAGTCAGTGCCTTCAAAAACAATTACTGTCTTCACGATCTTCCAGTTGGTTTACCTCTTGATATGCTTCGGCATAACATGGATACCAATAGCAGGGATCCTGTTCCCGTTGCCATTCTTCCTTATGATTCTTATCAGGCAGCATGTCCTCCCAAAGTTTTTTGAGCCAAATGACCTTCGGGAATTGGATGCAGCTGAGTATGAAGAGCTTGAAGGTGTCCACCACGATCACACGCTGGAGGATGGTGCATCTGATTCAGAAAGCTGTGGCAGCCGTGACGATGCCGAGATATTAGATGAGCTGACAACTAACCGTGGAGAGCTAAAGCACAGAACTTTCAACCACCGTGAAGAAAGGCACCCGCAGGCGCATACAAAAGCCGTTCAGCCCAGGTGTGGAGATACAGAAAACTGGTCCGAGTGCTAAAGAATTTCGGCTTACTGTCGGATGGGTATACGATAGGCATATATAGCACTTCCTCATACATTCCTACTTTCCTATACATCGCACTGTAGCAGGAGATCGGCGGCCGTATGATATGATATGCTTGTCAGTTGTCACATTGTGCATGGAGTAAACAGAAGCAACT ]
[+] EMBL AU225333 [ gccgctGGCCTGATGAATCGTGCTAGCAGTTTGGAAATCTATGGCAAGATGCAAGGGGTTTTCATTGAGATGGACTGTGAAAAAAATACTGATTCTGTTGACAAGGAGTTAAAGAGCTTGAAGGATGCTATGCTGCAAGAAGGTGATAAAGAAGGGACATTGGCTGAAGAATTTGACCCTATAAAACATATTGAAGCACATTTGCCTGTTCGAGTGAATGAGCAGAGACTAAGTAACTTGCTGCAATCCTTATTAGTTGGTGCTTGTGTTGGAGCTATGCCAGTCATCAAGATGATACCGACATCGGTCCTCTGGGGTTACTTTGCTTATATGGCCATTGACAGTCTACCTGGCAACCAGTTTTGGGAAAGAATAAGACTTATATTCATCCCATCAAGCCGACGCTACAAGGTTTTGGAGGGTCCCCATGCGTCTTTCATGGAGTCAG ]
[-] EMBL AU225787 [ ccgctCCCAGGTGTGGAGATACAGAAAACTGGTCCGAGTGCTAAAGAATTTCGGCTTACTGTCGGATGGGTATACGATAGGCATATATAGCACTTCCTCATACATTCCTACTTTCCTATACATCGCACTGTAGCAGGAGATCGGCGGCCGTATGATATGATATGCTTGTCAGTTGTCACATTGTGCATGGAGTAAACAGAAGCAACTGGATTTTACGATGTTCTCTAGCCTGTGAAATGTTGCTCCTTGAAAAAAAAAGCGGC]
consensusID : consensus_12019#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 886 fasta sequence
[AAGATGATACCGACATCGGTCCTCTGGGGTTACTTTGCTTATATGGCTATTGACAGTCTACCTGGCAACCAGTTTGGGAAAGGTTAAGACTTATATTCATCCCATCAAGCCGACGCTACAAGGTTCTTGAGGGTCCCCATGCCTCTTTCATGGAATCAGTGCCTTCAAAAACAATTATTGTCTTCACGATCTTCCAGTTGGTTTACCTCTTGATATGCTTCGGCATTACGTGGATACCAATAGCAGGGATCCTGTTCCCGCTGCCATTCTTCCTTATGATTCTTATCAGGCAGCATGTCCTCCCAAAGTTTTTTGAGCCAAATGACCTTCGGGAATTGGACGCAGCTGAGTATGAAGAGCTTGAAGGTGTCCACCACGATCACACGCTGGAGGATGGTGAATCTGATTCAGGAAGCTGTGGCAGCCGTGACGACGCTGAGATATTTGATGAGCTGACAACTAACCGTGGAGAGCTAAAGCACAGAACTTCCAGCCACCGTGAAGAAAGGCACCTGCAGGTGCATTCAAACGCCATTCAACCCAGGTGTGGAGATACTGAAAACTGGTCCGAGTGCTAATGAATTTCTGCTTATTCTGTCGGATGAGTATATTATAGGCGTATATAGCACTTCCTAATGCAGCGGTCCGTTGTATTATATACTGTAGTACATTGCTACTTTCCTATACATCATACTGTAGCTGTAGATCGGCCGTATGATATGACATGCTTGTCAGTTGCCACATTGTGCATGGAAAGCAACTAGATTACTGAAGGTCTGAAGGTAGTAGATTTCAATGTTCTCTATGCCTGTGAATTGTTTGCTCCTAGATTGTTGTGTTTGATTGTAAAATTGCATGGCAATCAATATGGAATATAGGCTGTGTT]
[-] EMBL CB624018 [AAGATGATACCGACATCGGTCCTCTGGGGTTACTTTGCTTATATGGCTATTGACAGTCTACCTGGCAACCAGTTTGGGAAAGGTTAAGACTTATATTCATCCCATCAAGCCGACGCTACAAGGTTCTTGAGGGTCCCCATGCCTCTTTCATGGAATCAGTGCCTTCAAAAACAATTATTGTCTTCACGATCTTCCAGTTGGTTTACCTCTTGATATGCTTCGGCATTACGTGGATACCAATAGCAGGGATCCTGTTCCCGCTGCCATTCTTCCTTATGATTCTTATCAGGCAGCATGTCCTCCCAAAGTTTTTTGAGCCAAATGACCTTCGGGAATTGGACGCAGCTGAGTATGAAGAGCTTGAAGGTGTCCACCACGATCACACGCTGGAGGATGGTGAATCTGATTCAGGAAGCTGTGGCAGCCGTGACGACGCTGAGATATTTGATGAGCTGACAACTAACCGTGGAGAGCTAAAGCACAGAACTTCCAGCCACCGTGAAGAAAGGCACCTGCAGGTGCATTCAAACGCCATTCAACCCAGGTGTGGAGATACTGAAAACTGGTCCGAGTGCTAATGAATTTCTGCTTATTCTGTCGGATGAGTATATTATAGGCGTATATAGCACTTCCTAATGCAGCGGTCCGTTGTATTATATACTGTAGTACATTGCTACTTTCCTATACATCATACTGTAGCTGTAGATCGGCCGTATGATATGACATGCTTGTCAGTTGCCACATTGTGCATGGAAAGCAACTAGATTACTGAAGGTCTGAAGGTAGTAGATTTCAATGTTCTCTATGCCTGTGAATTGTTTGCTCCTAGATTGTTGTGTTTGATTGTAAAATTGCATGGCAATCAATATGGAATATAGGCTGTGTT]
[-] EMBL CB622274 [ TCTTTCATGGAATCAGTGCCTTCAAAAACAATTATTGTCTTCACGATCTTCCAGTTGGTTTACCTCTTGATATGCTTCGGCATTACGTGGATACCAATAGCAGGGATCCTGTTCCCGCTGCCATTCTTCCTTATGATTCTTATCAGGCAGCATGTCCTCCCAAAGTTTTTTGAGCCAAATGACCTTCGGGAATTGGACGCAGCTGAGTATGAAGAGCTTGAAGGTGTCCACCACGATCACACGCTGGAGGATGGTGAATCTGATTCAGGAAGCTGTGGCAGCCGTGACGACGCTGAGATATTTGATGAGCTGACAACTAACCGTGGAGAGCTAAAGCACAGAACTTCCAGCCACCGTGAAGAAAGGCACCTGCAGGTGCATTCAAACGCCATTCAACCCAGGTGTGGAGATACTGAAAACTGGTCCGAGTGCTAATGAATTTCTGCTTATTCTGTCGGATGAGTATATTATAGGCGTATATAGCACTTCCTAATGCAGCGGTCCGTTGTATTATATACTGTAGTACATTGCTACTTTCCTATACATCATACTGTAGCTGTAGATCGGCCGTATGATATGACATGCTTGTCAGTTGCCACATTGTGCATGGAAAGCAACTAGATTACTGAAGGTCTGAAGGTAGTAGATTTCAATGTTCTCTATGCCTGTGAATTGTTTGCTCCTAGATTGTTCTGTTTGATTGTAAAATTGCATGGCAATCAATATGGAATATAG ]
consensusID : consensus_12019#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 848 fasta sequence
[CCAGTTTTGGGAAAGGTTAAGACTTATATTCATCCCATCAAGCCGACGCTACAAGGGTCTTGAGGGTCCCCATGCCTCTTTCATGGAATCAGTGCCTTCAAAAACAATTACTGTCTTCACGATCTTCCAGTTGGTTTACCTCTTGATATGCTTCGGCATTACGTGGATACCAATAGCAGGGATCCTGTTCCCGCTGCCATTCTTCCTTATGATTCTTATCAGGCAGCATGTCCTCCCAAAGTTTTTTGAGCCAAATGACCTTCGGGAATTGGACGCAGCTGAGTATGAAGAGCTTGAAGGTGTCCACCACGATCACACGCTGGAGGATGGTGAATCTGATTCAGGAAGCTGTGGCAGCCGTGACGACGCTGAGATATTTGATGAGCTGACAACTAACCGTGGAGAGCTAAAGCACAGAACTTCCAGCCACCGTGAAGAAAGGCACCTGCAGGTGCATTCAAACGCCATTCAACCCAGGTGTGGAGATACTGAAAACTTGTCCGAGTGCTAATGAATTTCTGCTTATTCTGTCGGATGAGTATATTATAGGCGTATATAGCACTTCCTCAAGCAGCGGGCCGTTGTATTATATACATAATACATTCATACTTTCATATACATCGTACTGTAGCTGGAGATCGGCCGTACGATATGACATGCTTGTACGTTGTCAACATGTCACATTGTGCATGCAGTAAACAAAAGCAACTGGATTTTACTGAAGGTCTGTAAGGCTGTGTGACATGTAGATTTCAATGTTCTCTAGCCTGTGAATTGTTGCTCCTAGATTGTTCTGTTTGATTGTAAAATTGCATGGCAATCAATATGAAATATAGATGGGAAAAAAA]
[+] EMBL CF294761 [CCAGTTTTGGGAAAGGTTAAGACTTATATTCATCCCATCAAGCCGACGCTACAAGGGTCTTGAGGGTCCCCATGCCTCTTTCATGGAATCAGTGCCTTCAAAAACAATTACTGTCTTCACGATCTTCCAGTTGGTTTACCTCTTGATATGCTTCGGCATTACGTGGATACCAATAGCAGGGATCCTGTTCCCGCTGCCATTCTTCCTTATGATTCTTATCAGGCAGCATGTCCTCCCAAAGTTTTTTGAGCCAAATGACCTTCGGGAATTGGACGCAGCTGAGTATGAAGAGCTTGAAGGTGTCCACCACGATCACACGCTGGAGGATGGTGAATCTGATTCAGGAAGCTGTGGCAGCCGTGACGACGCTGAGATATTTGATGAGCTGACAACTAACCGTGGAGAGCTAAAGCACAGAACTTCCAGCCACCGTGAAGAAAGGCACCTGCAGGTGCATTCAAACGCCATTCAACCCAGGTGTGGAGATACTGAAAACTTGTCCGAGTGCTAATGAATTTCTGCTTATTCTGTCGGATGAGTATATTATAGGCGTATATAGCACTTCCTCAAGCAGCGGGCCGTTGTATTATATACATAATACATTCATACTTTCATATACA ]
[-] EMBL CF294762 [ CAACTAACCGTGGAGAGCTAAAGCACAGAACTTCCAGCCACCGTGAAGAAAGGCACCTGCAGGTGCATTCAAACGCCATTCAACCCAGGTGTGGAGATACTGAAAACTTGTCCGAGTGCTAATGAATTTCTGCTTATTCTGTCGGATGAGTATATTATAGGCGTATATAGCACTTCCTCAAGCAGCGGCCCGTTGTATTATATACATAATACATTCATACTTTCATATACATCGTACTGTAGCTGGAGATCGGCCGTACGATATGACATGCTTGTACGTTGTCAACATGTCACATTGTGCATGCAGTAAACAAAAGCAACTGGATTTTACTGAAGGTCTGTAAGGCTGTGTGACATGTAGATTTCAATGTTCTCTAGCCTGTGAATTGTTGCTCCTAGATTGTTCTGTTTGATTGTAAAATTGCATGGCAATCAATATGAAATATAGATGGGAAAAAAA]
consensusID : consensus_12019#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 783 fasta sequence
[CCGCCACCACCCTCTAACTCTAGGGTTTCGCTCCCGCGCCGACGAGCGGCCAGCATTGCCGCCGCCGCCGCGGCCGCCGCAACCCCGCGCGCCATCGAT-TTGCTCGACGACTGA-TCTTCTGCT-TAGTCTCGAGCTGAGTACAGCTGATGGATCTACTAAGGACTCCCTTTAAGGGAGTCGTCGCTGATATCGAAGGCCGAGTAGCTTGGTACAAGCATGACTGGGTTGCTGGATTCCGCTCTGGCTTCAGGATATTGGCACCTACCATGTATATCTTCTTTGCCTCTGCCCTCCCAGTCATCGCCTTCGGAGCGCAACTGAGCAGAGAAACAAATGGTATACTCACCACAGTAGAAACACTGGCATCTACTGCATTATGTGGCATCATACATTCAATTCTTGGAGGGCAGCCTCTGTTGATAGTTGGAGTTGCAGAGCCAACTATAATCATGTACACGTATCTCTACAACTTTGCCAAGAACCAGCAAGCTCTGGGGGAACGACTGTATTTAGCATGGGCTGGATGGGTCTGCATCTGGACTGCGATCATGTTGTTTCTTCTGGCAATGTTCAATGCTTCTAATGTTATTAGCAGGTTTACAAGGGTTGCAGGAGAACTTTTTGGGATGTTGATTACTGTTCTGTTCCTGCAACAAGCCATTAAAGGAATTATAGAAGAATTCAAGGTGCCTAGAGATGCAGACCATAGTTCACCTATATATCAATTCCAGTGGCTGTATGTCAACGGCCTGCTTGGTGNTATCTTTTCAATTGGGCTGTTAT]
[+] EMBL CB624017 [CCGCCACCACCCTCTAACTCTAGGGTTTCGCTCCCGCGCCGTCGAGCGGCCAGCATTGCCGCCGCCGCCGCGGCCGCCGCAACCCCGCGCGCCATCGAT TTGCTCGACGACTGA TCTTCTGCT TAGTCTCGAGCTGAGTACAGCTGATGGATCTACTAAGGACTCCCTTTAAGGGAGTCGTCGCTGATATCGAAGGCCGAGTAGCTTGGTACAAGCATGACTGGGTTGCTGGATTCCGCTCTGGCTTCAGGATATTGGCACCTACCATGTATATCTTCTTTGCCTCTGCCCTCCCAGTCATCGCCTTCGGAGCGCAACTGAGCAGAGAAACAAATGGTATACTCACCACAGTAGAAACACTGGCATCTACTGCATTATGTGGCATCATACATTCAATTCTTGGAGGGCAGCCTCTGTTGATAGTTGGAGTTGCAGAGCCAACTATAATCATGTACACGTATCTCTACAACTTTGCCAAGAACCAGCAAGCTCTGGGGGAACGACTGTATTTAGCATGGGCTGGATGGGTCTGCATCTGGACTGCGATCATGTTGTTTCTTCTGGCAATGTTCAATGCTTCTAATGTTATTAGCAGGTTTACAAGGGTTGCAGGAGAACTTTTTGGGATGTTGATTACTGTTCTGTTCCTGCAACAAGCCATTAAAGGAATTATAGAAGAATTCAAGGTGCCTAGAGATGCAGACCATAGTTCACCTATATATCAATTCCAGTGGCTGTATGTCAACGGCCTGCTTGGTGNTATCTTTTCAATTGGGCTGTTAT]
[+] EMBL CB621206 [ GCCACCACCCTCTAACTCTAGGGTTTCACTCCCGCGCCGACGAGCGGCCAGTATTGCCGCCGCCGCCGCGGTCGCCGCAACCCCGCGCGCCATCGATGTTGCTCGACGACTGAGTCTTCTGATATAGTCTCGAGCTGAGTACAGCTGATGGATCTACTAACGACTCCCTTTAAGGGAGTCGTCGCTGATATCGAAGGCCGAGTAGCTTGGCACAAGCATGACTGGGTTGCTGGATTCCGCTCTGGCTTCAGGATATTGGCACCTACCATGTATATCTTCTTTGCCTCTGCCCTCCCAGTCATCGCCTTCGGAGCACAACTGAGCACAGAAACAAATGGTATACTCACCACAGTAGAAACACTGGCATCTACTGCATTATGTGGCATCATACATTCAATTCTTGGAGGGCAGCCTCTGATGATAATTGGAGTTGCAGAGCCAACTATAATCATGTACACGTATCTCTACAACTTTGCCAAGAAGCAGCAAGCTCTGGGGGAACGACTGTATTTAGCATGGGCTGGATGGGTCTGCATCTGGACTGCGATCATGTTGTTTCTTCTGGGAATGTTCAATGCTTCTAATGTTATTAGCAGGTTTACAAGGGTTGCAGGAGAACTTTTTGGGATGTTGATTACTGTTCTGATCCTGCGACAAGCCATTA ]
[+] EMBL CB622273 [ CCGCCTCGAAGAGCGGCCAGCATTGCCGCCGCCGCCGCGGCCGCCGCAACCCCGCGCGCCATCGAT TTGCTCGACGACTGA TCTTCTGCT TAGTCTCGAGCTGAGTACAGCTGATGGATCTACTAAGGACTCCCTTTAAGGGAGTCGTCGCTGATATCGAAGGCCGAGTAGCTTGGTACAAGCATGACTGGGTTGCTGGATTCCGCTCTGGCTTCAGGATATTGGCACCTACCATGTATATCTTCTTTGCCTCTGCCCTCCCAGTCATCGCCTTCGGAGCGCAACTGAGCAGAGAAACAAATGGTATACTCACCACAGTAGAAACACTGGCATCTACTGCATTATGTGGCATCATACATTCAATTCTTGGAGGGCAGCCTCTGTTGATAGTTGGAGTTGCAGAGCCAACTATAATCATGTACACGTATCTCTACAACTTTGCCAAGAACCAGCAAGCTCTGGGGGAACGACTGTATTTAGCATGGGCTGGATGGGTCTGCATCTGGACTGCGATCATGTTGTTTCTTCTGGCAATGTTCAATGCTTCTAATGTTATTAGCAGGTTTACAAGGGTTGCAGGAGAACTTTTTGGGATGTTGATTACTGTTCTGTTCCTGCAACAAGCCATTAAAGGAATTATAGAAGAATTCAAGGTGCCTAGAGATGCAGACCATAGTTCACCTATATATCAATTCCAGTGGCTGTATGTCAACGGCCTGCTTGGTGTTATCTTTT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12019#0 ------------------------------------------------------------
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 AAGATGATACCGACATCGGTCCTCTGGGGTTACTTTGCTTATATGGCTATTGACAGTCTA 60
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 ---------------------GAGCCAACCCC-GCCCCGCGCCG-CCCCGCCGCGGCCGC 37
consensus_12019#3 -----------CCGCCACCACCCTCTAACTCTAGGGTTTCGCTC-CCGCGCCGACGAGCG 48
consensus_12019#1 CCTGGCAACCAGTTT-GGGAAAGGTTAAGACTTATATTCATCCCATCAAGCCGACGCTAC 119
consensus_12019#2 --------CCAGTTTTGGGAAAGGTTAAGACTTATATTCATCCCATCAAGCCGACGCTAC 52
** * * * **** *
consensus_12019#0 GTCGTCTCCTCCGCCACCTCCACGTCTAGGGT--TCCCCTCCGCCGTCAGCATTGCCCGC 95
consensus_12019#3 GCCAGCATTGCCGCCGCCGCCGCGGCCGCCGCAACCCCGCGCGCCATCGAT-TTGCTCGA 107
consensus_12019#1 AAGGTTCTTGAGGGTCCCCATGCCTCTTTCATGGAATCA-GTGCCTTCAAAAACAATTAT 178
consensus_12019#2 AAGGGTCTTGAGGGTCCCCATGCCTCTTTCATGGAATCA-GTGCCTTCAAAAACAATTAC 111
* ** * * * *** **
consensus_12019#0 CG-------GAGCTTCTGGTTAGTATTGAGTGGAATTCAGCTGATGGAACTACTAAAGAT 148
consensus_12019#3 CGACT----GATCTTCTGCTTAGTCTCGAGCTGAGTACAGCTGATGGATCTACTAAGGAC 163
consensus_12019#1 TGTCTTCACGATCTTCCAGTTGGTTTACCTCTTGATATGCTT--CGGCATTACGTGGATA 236
consensus_12019#2 TGTCTTCACGATCTTCCAGTTGGTTTACCTCTTGATATGCTT--CGGCATTACGTGGATA 169
* ** **** ** ** * * * ** ***
consensus_12019#0 TCCCTTTAAGGGT----GTCGTCGCTGATATCGAAGGCCGAGCAGCTTGGTACA-AGCAT 203
consensus_12019#3 TCCCTTTAAGGGA----GTCGTCGCTGATATCGAAGGCCGAGTAGCTTGGTACA-AGCAT 218
consensus_12019#1 CCAATAGCAGGGATCCTGTTCCCGCTGCCATTCTTCCTTATGATTCTTATCAGGCAGCAT 296
consensus_12019#2 CCAATAGCAGGGATCCTGTTCCCGCTGCCATTCTTCCTTATGATTCTTATCAGGCAGCAT 229
* * **** ** ***** ** * *** * *****
consensus_12019#0 GATT-----GGCTTGAGGGATTCCACTCTGGCTTCAGGATATTGGCACCTACTATGTATA 258
consensus_12019#3 GACT-----GGGTTGCTGGATTCCGCTCTGGCTTCAGGATATTGGCACCTACCATGTATA 273
consensus_12019#1 GTCCTCCCAAAGTTTTTTGAGCCAAAT--GACCTTCGGGAATTGGACGCAGCTGAGTATG 354
consensus_12019#2 GTCCTCCCAAAGTTTTTTGAGCCAAAT--GACCTTCGGGAATTGGACGCAGCTGAGTATG 287
* ** ** * * * * * ** ***** * * ****
consensus_12019#0 TATTTTTTGCCTCTGCCCTCC-CAGTCAT-AGCCTTCGGA--ACGCAACTGAGCAGAGAA 314
consensus_12019#3 TCTTCTTTGCCTCTGCCCTCC-CAGTCAT-CGCCTTCGGA--GCGCAACTGAGCAGAGAA 329
consensus_12019#1 AAGAGCTTGAAGGTGTCCACCACGATCACACGCTGGAGGATGGTGAATCTGATTCAGGAA 414
consensus_12019#2 AAGAGCTTGAAGGTGTCCACCACGATCACACGCTGGAGGATGGTGAATCTGATTCAGGAA 347
*** ** ** ** * *** ** *** * * **** ***
consensus_12019#0 ACAAATGGTATACTCACCACAGTAGAAACACTGGCATCTACTGCAATATGTGGCATCATC 374
consensus_12019#3 ACAAATGGTATACTCACCACAGTAGAAACACTGGCATCTACTGCATTATGTGGCATCATA 389
consensus_12019#1 GCTG-TGGCAGCCGTGACGACGCTGAGATATTTG-ATGAGCTG-ACAACTAACCGTGGAG 471
consensus_12019#2 GCTG-TGGCAGCCGTGACGACGCTGAGATATTTG-ATGAGCTG-ACAACTAACCGTGGAG 404
* *** * * * * ** * * * * ** *** * * * *
consensus_12019#0 CATTCCATTCTTGGAGGGC-AGCCTCTGTTGATAGTTGGAGTTGCAGAGCCA-------- 425
consensus_12019#3 CATTCAATTCTTGGAGGGC-AGCCTCTGTTGATAGTTGGAGTTGCAGAGCCA-------- 440
consensus_12019#1 AGCTAAAGCACAGAACTTCCAGCCACCGTGAAGAAAGGCACCTGCAGGTGCATTCAAACG 531
consensus_12019#2 AGCTAAAGCACAGAACTTCCAGCCACCGTGAAGAAAGGCACCTGCAGGTGCATTCAAACG 464
* * * * * **** * ** * * * * ***** **
consensus_12019#0 --ACTATAATCATGTACACGTATCTCTACAACTTTGCCAAGAACCAGCAAGCTCTGGGGG 483
consensus_12019#3 --ACTATAATCATGTACACGTATCTCTACAACTTTGCCAAGAACCAGCAAGCTCTGGGGG 498
consensus_12019#1 CCATTCAACCCAGGTGTGGAGATACTGAAAACTGGTCCGAGTGCTAATGAATTTCTGCTT 591
consensus_12019#2 CCATTCAACCCAGGTGTGGAGATACTGAAAACTTGTCCGAGTGCTAATGAATTTCTGCTT 524
* * * ** ** ** * **** ** ** * * * * *
consensus_12019#0 AA-----CGACTGTATTTAGCATGGGC-TGGATGGGTCTGCATC---TGGACTGCGATCA 534
consensus_12019#3 AA-----CGACTGTATTTAGCATGGGC-TGGATGGGTCTGCATC---TGGACTGCGATCA 549
consensus_12019#1 ATTCTGTCGGATGAGTATATTATAGGCGTATATAGCACTTCCTAATGCAGCGGTCCGTTG 651
consensus_12019#2 ATTCTGTCGGATGAGTATATTATAGGCGTATATAGCACTTCCTCAAGCAGCGGGCCGTTG 584
* ** ** * ** ** *** * ** * ** * * * * *
consensus_12019#0 TGTTGTTTCTTCTGGCAATGTTCAATGCTTCTA-ATGTTAT-TAGCAGGTTTACAAGGGT 592
consensus_12019#3 TGTTGTTTCTTCTGGCAATGTTCAATGCTTCTA-ATGTTAT-TAGCAGGTTTACAAGGGT 607
consensus_12019#1 TATTATATACTGTAGTACATTGCTACTTTCCTATACATCATACTGTAGCTGTAGATCGGC 711
consensus_12019#2 TATTATATAC-ATAATACATTCATACTTTCATATACATCGTACTGTAGCTGGAGATCGGC 643
* ** * * * * * * * ** * * * * ** * * * **
consensus_12019#0 TGCAGGAGA--ACTTTTCGGGATGTTGATCACTGTTCTGTTCCTGCAACAAGCTATTAAA 650
consensus_12019#3 TGCAGGAGA--ACTTTTTGGGATGTTGATTACTGTTCTGTTCCTGCAACAAGCCATTAAA 665
consensus_12019#1 CGTATGATATGACATGCTTGTCAGTTGCCA--------CATTGTGCATG--------GAA 755
consensus_12019#2 CGTACGATATGACATGCTTGTACGTTGTCAACATGTCACATTGTGCATGCAGTAAACAAA 703
* * ** * ** * * **** * **** **
consensus_12019#0 GGAATTATAGAAGAATTCAAGGTACCTGGAGGTGTCGACCAT--AGTTCACCTATATATC 708
consensus_12019#3 GGAATTATAGAAGAATTCAAGGTGCCTAGAGATGCAGACCAT--AGTTCACCTATATATC 723
consensus_12019#1 AGCAACTAGATT--ACTGAAGGTCTG-AAGGTAGT---------AGATTTCAATGTTCTC 803
consensus_12019#2 AGCAACTGGATTTTACTGAAGGTCTGTAAGGCTGTGTGACATGTAGATTTCAATGTTCTC 763
* * * * ***** * * ** * * * **
consensus_12019#0 GATTCCAGTGG-TTGTATGTCAACGGCCTACTTGGTGTAATCTTTTCAATTGGGCTGTTA 767
consensus_12019#3 AATTCCAGTGG-CTGTATGTCAACGGCCTGCTTGGTGNTATCTTTTCAATTGGGCTGTTA 782
consensus_12019#1 TATGCCTGTGAATTGTTTGCTCCTAGATTGTTGTGTTTGAT-TGTAAAATTGCATGGCAA 862
consensus_12019#2 TA-GCCTGTGAATTGTT-GCTCCTAGATTGTTCTGTTTGAT-TGTAAAATTGCATGGCAA 820
* ** *** *** * * * * ** ** * * ***** * *
consensus_12019#0 TACACTGCATTAAGGTCAAGAAGGGCAAGGTCATGGGTGTATGGTCAAGGGTGGCTCAGA 827
consensus_12019#3 T----------------------------------------------------------- 783
consensus_12019#1 TCAATATGGAATATAGGCTGTGTT------------------------------------ 886
consensus_12019#2 TCAATATGAAATATAGATGGGAAAAAAA-------------------------------- 848
*
consensus_12019#0 GGCTTCATTTCTGATTATGGTGTCCCACTTATGGTGATTGTTTGGACAGCATTATCGTAC 887
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 GCATTACCAAAGGATGTTCCTTCAGGAGTTCCTAGGAGGCTGTTCAGTCCACTTCCCTGG 947
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 GAGTCAAGTTCACTGCATCACTGGACCATAGCAAAGGACCTGTTTTCTGTTCCCCCAGCA 1007
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 TACATATTTGCTGCCATTCTGCCAGCTTTGATGATTGCAGGACTTTACTTCTTTGATCAT 1067
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 AGCGTGGCTTCACAATTGGCGCAACAAAAGGAGTTTAACTTGAAGAAGCCCTCTGCTTAC 1127
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 CATTATGACATTTTGGTCCTCGGATTCATGGTCCTGCTTTGTGGTTTGATTGGCATCCCT 1187
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 CCATCTAATGGAGTACTTCCTCAGTCCCCGATGCATACAAGAAGCCTTGCTGTCCTTAAG 1247
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 GGGCAGCTGCTACGCAAAAAGATGGTTCAAACTGCCAACGAAGGCCTGATGAATCGTGCT 1307
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 AGCAGTTTGGAAATCTATGGCAAGATGCAAGGGGTTTTCATTGAGATGGACTGTGAAAAA 1367
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 AATACTGATTCTGTTGACAAGGAGTTAAAGAGCTTGAAGGATGCTATGCTGCAAGAAGGT 1427
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 GATAAAGAAGGGACATTGGCTGAAGAATTTGACCCTATAAAACATATTGAAGCACATTTG 1487
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 CCTGTTCGAGTGAATGAGCAGAGACTAAGTAACTTGCTGCAATCCTTATTAGTTGGTGCT 1547
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 TGTGTTGGAGCTATGCCAGTCATCAAGATGATACCGACATCGGTCCTCTGGGGTTACTTT 1607
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 GCTTATATGGCCATTGACAGTCTACCTGGCAACCAGTTTTGGGAAAGAATAAGACTTATA 1667
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 TTCATCCCATCAAGCCGACGCTACAAGGTTTTGGAGGGTCCCCATGCGTCTTTCATGGAG 1727
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 TCAGTGCCTTCAAAAACAATTACTGTCTTCACGATCTTCCAGTTGGTTTACCTCTTGATA 1787
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 TGCTTCGGCATAACATGGATACCAATAGCAGGGATCCTGTTCCCGTTGCCATTCTTCCTT 1847
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 ATGATTCTTATCAGGCAGCATGTCCTCCCAAAGTTTTTTGAGCCAAATGACCTTCGGGAA 1907
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 TTGGATGCAGCTGAGTATGAAGAGCTTGAAGGTGTCCACCACGATCACACGCTGGAGGAT 1967
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 GGTGCATCTGATTCAGAAAGCTGTGGCAGCCGTGACGATGCCGAGATATTAGATGAGCTG 2027
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 ACAACTAACCGTGGAGAGCTAAAGCACAGAACTTTCAACCACCGTGAAGAAAGGCACCCG 2087
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 CAGGCGCATACAAAAGCCGTTCAGCCCAGGTGTGGAGATACAGAAAACTGGTCCGAGTGC 2147
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 TAAAGAATTTCGGCTTACTGTCGGATGGGTATACGATAGGCATATATAGCACTTCCTCAT 2207
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 ACATTCCTACTTTCCTATACATCGCACTGTAGCAGGAGATCGGCGGCCGTATGATATGAT 2267
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 ATGCTTGTCAGTTGTCACATTGTGCATGGAGTAAACAGAAGCAACTGGATTTTACGATGT 2327
consensus_12019#3 ------------------------------------------------------------
consensus_12019#1 ------------------------------------------------------------
consensus_12019#2 ------------------------------------------------------------
consensus_12019#0 TCTCTAGCCTGTGAAATGTTGCTCCTTGAAAAAAAAAGCGGC 2369
consensus_12019#3 ------------------------------------------
consensus_12019#1 ------------------------------------------
consensus_12019#2 ------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||