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Oryza sativa
cluster # 12022 cluster # 12022       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12022#0 length = 1157 sequences # 9  
consensus_12022#1 length = 933 sequences # 1  

consensusID : consensus_12022#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1157
fasta sequence
                              [CCTCACCCCTCTCTCTCTCGCCCCACCCGGATGCCTCGCGCTGCCGGAGGCTGACCTCGCCGCCGGCGACTCCGCTCGGCCGCCGGAGCAGCCAGCGCGCGCGGATTTTCGAATGTATCAGGTCGACTGAGCTGCGGTTTCCTTCTGATCCCTGGGACAAGGTTTCCGATTCAGCGAAGGAGCTAATAACCGAGATGCTGCGGCGCGATCCTCGACAGAGGCTCACAGCCAAGCAGGTCCTAGAGCATTCCTGGATACAAGATCATGCCGACCAATCCCAAGATTCTTGTGGACATTGCCATGAGATCAATCTCAGAGGAGAGGACGCCGGCTCATGTTCGTTCTCGACGCCGCTGGCGTCATGCAGCCGCGATGTGAGCTTCAACACCGGTGGCCCGGTCGCCTGCCAAAGCATGTCTGAAGAAGCGTGCTCCCCCACATTCGCCTGCAGATCATCGTTCTCTGCATTTGTCGCTGAGAATGCTCCG-TCGTGCGCGCTCTCGGGGTTCTCCTTCGGTGGCGTCTGCGAACCC-TGCAACGCCGTGTTCCCGTCCCCGGTCGCTTCCATGCCGAGCTTCTCCTTCTTCTGCGGCCAAGAACCCGGCGAGCCTGAGTCGTCGCCTGATGGTGACGCCTTGGGCGAGAAAGCTCAC-TGCGACGCGACGGTGGTGGCCCTCGTCTCGTCCTCGGCT-CCGAGGACAGCGGAGGTCCTGAGGGCCGCCGT-AAGGGCGAACCCGTCGCGCGCCATCGGCATGAACAGCAGGAGGAACCACACCATCGGCGCCGGCGAGCGCGAGCACCTGGATGTGGCGGTCGCCGAGTCGGTGATACGGTGGGCGTCCTGCACCAACCTGTCGACGACGCACTCGCTCCGGGCTTCGCTGGTGTGCTAGCATTTTGTTTATCTGTGCAATTCACCATGTGTCCTGTGGCTGTGAGAGTGCTTCGCTAGTCTCTTGCCTTCCTCCTTGCACCTGCGATGCAAGCTGAAAGATAAGAGTGAGATGAGTGATGAGATGAGATGAGAGTGTGAGTGGTAGAATGTAACGTGGACCTGATGATATATAATGCTATAGTAGATTACCGAGTAAAAAGCTTGCTTTCTGTTTGTTGAATGTGTTCCTTATTTTTGGTCTCCTTTGTGCAAAAAAAAAAAA]

[+] EMBL AK058892             [CCTCACCCCTCTCTCTCTCGCCCCACCCGGATGCCTCGCGCTGCCGGAGGCTGACCTCGCCGCCGGCGACTCCGCTCGGCCGCCGGAGCAGCCAGCGCGCGCGGATTTTCGAATGTATCAGGTCGACTGAGCTGCGGTTTCCTTCTGATCCCTGGGACAAGGTTTCCGATTCAGCGAAGGAGCTAATAACCGAGATGCTGCGGCGCGATCCTCGACAGAGGCTCACAGCCAAGCAGGTCCTAGAGCATTCCTGGATACAAGATCATGCCGACCAATCCCAAGATTCTTGTGGACATTGCCATGAGATCAATCTCAGAGGAGAGGACGCCGGCTCATGTTCGTTCTCGACGCCGCTGGCGTCATGCAGCCGCGATGTGAGCTTCAACACCGGTGGCCCGGTCGCCTGCCAAAGCATGTCTGAAGAAGCGTGCTCCCCCACATTCGCCTGCAGATCATCGTTCTCTGCATTTGTCGCTGAGAATGCTCCG TCGTGCGCGCTCTCGGGGTTCTCCTTCGGTGGCGTCTGCGAACCC TGCAACGCCGTGTTCCCGTCCCCGGTCGCTTCCATGCCGAGCTTCTCCTTCTTCTGCGGCCAAGAACCCGGCGAGCCTGAGTCGTCGCCTGATGGTGACGCCTTGGGCGAGAAAGCTCAC TGCGACGCGACGGTGGTGGCCCTCGTCTCGTCCTCGGCT CCGAGGACAGCGGAGGTCCTGAGGGCCGCCGT AAGGGCGAACCCGTCGCGCGCCATCGGCATGAACAGCAGGAGGAACCACACCATCGGCGCCGGCGAGCGCGAGCACCTGGATGTGGCGGTCGCCGAGTCGGTGATACGGTGGGCGTCCTGCACCAACCTGTCGACGACGCACTCGCTCCGGGCTTCGCTGGTGTGCTAGCATTTTGTTTATCTGTGCAATTCACCATGTGTCCTGTGGCTGTGAGAGTGCTTCGCTAGTCTCTTGCCTTCCTCCTTGCACCTGCGATGCAAGCTGAAAGATAAGAGTGAGATGAGTGATGAGATGAGATGAGAGTGTGAGTGGTAGAATGTAACGTGGACCTGATGATATATAATGCTATAGTAG                                                                              ]
[+] EMBL CA757343             [                                                                                                                                                                                                                           GGCTCACAGCCAAGCAGGTCCTAGAGCATTCCTGGATACAAGATCATGCCGACCAATCCCAAGATTCTTGTGGACATTGCCATGAGATCAATCTCAGAGGAGAGGACGCCGGCTCATGTTCGTTCTCGACGCCGCTGGCGTCATGCAGCCGCGATGTGAGCTTCAACACCGGTGGCCCGGTCGCCTGCCAAAGCATGTCTGAAGAAGTGTGCTCCCCCACATTCGCCTGCAGATCATCGTTCTCTGCATTTGTCGCCGAGAATGCTCCG TCGTGCGCGCTCTCGGGGTTCTCCTTCGGTGGCGTCTGCGAACCC TGCAACGCCGTGTTCCCGTCCCCGGTCGCTTCCATGCCGAGCTTCTCCTTCTTCTGCGGCCAAGAACCCGGCGAGCCTGAGTCGTCGCCTGATGGTGACGCCTTGGGCGAGAAAGCTCAC TGCGACGCGACGGTGGTGGCCCTCGTCTCGTCCTCGGCT CCGAGGACAGCGGAGGTCCTGAGGGCCGCCGT AAGGGCGAACCCGTCGCGCGCCATCGGCATGAACAGCAGGAGGAACCACACCATCGGCGCCGGCGAGCGCGAGCACCTGGATGTGGCGGTCGCCGAGTCGGTGATACGGTGGGCGTCCTGCACCAACCTGTCGACGACGCACTCGCTCCGGGCTTCGCTGGTGTGCTAGCATTTTGTTTATCTGTGCAATTCACC                                                                                                                                                                                                                                              ]
[-] EMBL CB657644             [                                                                                                                                                                                                                                                TAGAGCATTCCTGGATACAAGATCATGCCGACCAATCCCAAGATTCTTGTGGACATTGCCATGAGATCAATCTCAGAGGAGAGGACGCCGGCTCATGTTCGTTCTCGACGCCGCTGGCGTCATGCAGCCGCGATGTGAGCTTCAACACCGGTGGCCCGGTCGCCTGCCAAAGCATGTCTGAAGAAGCGTGCTCCCCCACATTCGCCTGCAGATCATCGTTCTCTGCATTTGTCGCTGAGAATGCTCCG TCGTGCGCGCTCTCGGGGTTCTCCTTCGGTGGCGTCTGCGAACCC TGCAACGCCGTGTTCCCGTCCCCGGTCGCTTCCATGCCGAGCTTCTCCTTCTTCTGCGGCCAAGAACCCGGCGAGCCTGAGTCGTCGCCTGATGGTGACGCCTTGGGCGAGAAAGCTCAC TGCGACGCGACGGTGGTGGCCCTCGTCTCGTCCTCGGCT CCGAGGACAGCGGAGGTCCTGAGGGCCGCCGT AAGGGCGAACCCGTCGCGCGCCATCGGCATGAACAGCAGGAGGAACCACACCATCGGCGCCGGCGAGCGCGAGCACCTGGATGTGGCGGTCGCCGAGTCGGTGATACGGTGGGCGTCCTGCACCAACCTGTCGACGACGCACTCGCTCCGGGCTTCGCTGGTGTGCTAGCATTTTGTTTATCTGTGCAATTCACCATGTGTCCTGTGGCTGTGAGAGTGCTTCGCTAGTCTCTTGCCTTCCTCCTTGCACCTGCGATGCAAGCTGAAAGATAAGAGTGAGATGAGTGATGAGATGAGATGAGAGTGTGAGTGGTAGAATGTAACGTGGACCTGATGATATATAATGCTATAGTAGATT                                                                           ]
[+] EMBL AU030196             [                                                                                                                                                                                                                                                                                                                                                         CGACGCCGCTGG GTCATGCAGCCGCGATGTGAGCTTCAACACCGGTGGCCCGGTCGCCTGCCAAAGCATGTCTGAAGAAGCGTGCTCCCCCACATTCGCCTGCAGATCATCGTTCTCTGCATTTGTCGCTGAGAATGCTCCG TCGTGCGCGCTCTCGGGGTTCTCCTTCGGTGGCGTCTGCGAACCC TGCAACGCCGTGTTCCCGTCCCCGGTCGCTTCCATGCCGAGCTTCTCCTTCTTCTGCGGCCAAGAACCCGGCGAGCCTGAGTCGTCGCCTGATGGTGACGCCTTGGGCGAGAAAGCTCACTTGCGACGCGACGGTGGTGGGCCTCGTCTCGTCCTCGGCT CCGAGGACANCGGAAGTCCTNAAGGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB642628             [                                                                                                                                                                                                                                                                                                                                                                                           CTTCAACACCGGTGGCCCGGTCGCCTGCCAAAGCATGTCTGAAGAAGCGTGCTCCCCCACATTCGCCTGCAGATCATCGTTCTCTGCATTTGTCGCTGAGAATGCTCCG TCGTGCGCGCTCTCGGGGTTCTCCTTCGGTGGCGTCTGCGAACCC TGCAACGCCGTGTTCCCGTCCCCGGTCGCTTCCATGCCGAGCTTCTCCTTCTTCTGCGGCCAAGAACCCGGCGAGCCTGAGTCGTCGCCTGATGGTGACGCCTTGGGCGAGAAAGCTCAC TGCGACGCGACGGTGGTGGCCCTCGTCTCGTCCTCGGCT CCGAGGACAGCGGAGGTCCTGAGGGCCGCCGT AAGGGCGAACCCGTCGCGCGCCATCGGCATGAACAGCAGGAGGAACCACACCATCGGCGCCGGCGAGCGCGAGCACCTGGATGTGGCGGTCGCCGAGTCGGTGATACGGTGGGCGTCCTGCACCAACCTGTCGACGACGCACTCGCTCCGGGCTTCGCTGGTGTGCTAGCATTTTGTTTATCTGTGCAATTCACCAT                                                                                                                                                                                                                                            ]
[-] EMBL CB642627             [                                                                                                                                                                                                                                                                                                                                                                                                   CCGGTGGCCCGGTCGCCTGCCAAAGCATGTCTGAAGAAGCGTGCTCCCCCACATTCGCCTGCAGATCATCGTTCTTTGCATTTGTCGCTGAGAATGCTCCG TGGTGCGCGCTCTCGGGGTTCTCCTTCGGTGGCGTCTGCGAACCC AGCAACGCCGTGTTCCCGTCCCCGGTCGCTTCCATGCCGAGCTTCTCCTTCTTCTGCGGCCAAGAACCCGGCGAGCCTGAGTCGTCGCCTGATGGTGACGCCTTGGGCGAGAAAGCTCAC TGCGACGCGCCGGTGGTGGCCCTCGTCTCGTCCTCGGCT CCGAGGACAGCGGAGGTCCTGAGGGCCGCCGT AAGGGCGAACCCGTCGCGCGCCATCGGCATGAACAGCAGGAGGAACCACACCATCGGCGCCGGCGAGCGCGAGCACCTGGATGCGGCGGTCGCCGAGTTGGTGATAGGGTGGGGCTCAGGCACCt                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU075991             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ctcCCGTTCGTGCGCGCTCTCGGGNTTCTCCTTCGGTGGCGTCTGCGAACCCTTGCAACGCCGTGTTCCCGTCCCCGGTCGCTTCCATGCCGAGCTTCTCCTTCTTCTGCGGCCAAGAACCCGGCGAGCCTGAGTCGTCGCCTGATGGTGACGCCTTGGGCGAGAAAGCTCAC TGCGACGCGACGGTGGTGGCCCTCGTCTCGTCCTCGGCT CCGAGGACAGCGGAGGTCCTGAGGGCCGCCGT AAGGGCGAACCCGTCGCGCGCCATCGGCATGAACAGCAGGAGGAACCACACCATCGGCGCCGGCGAGCGCGAGCACCTGGATGTGGCGGTCGCCGAGTCGGTGATACGGTGGGCGTCCTGCACCAACCTGTCGACGACGCACTCGCTCCGGG TTCGCTGGTGTGCTAGCATTTTGTTTATCTGTGCAATTCACCATGTGTCCTGTGGCTGTGAGAGT NTTCGCTAGTCTCTTGCCTTCCTCCTTGCACCTGCGATGCAAGCTGAAAGATAAGAGTGAGATGAGTGATGAGATGAGATGAGAGTGTGAGTGGTAGAATGTAACGTGGACCTGATGATATATAATGCTATAGTAGATTACCGAGTAGTGTGCTTGCTTTCTGTTTGTTGAATGTGTTCCTTATTTTTGGTCTCCTTTGTGCAAAAAAAAAAAA]
[+] EMBL AU030197             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGTCCTCGGCTCCCGAGGACAGCGGAGGTCCTGAGGNCCGCCGTAAAGGGCGAACCCGTCGCGCGCCATCGGCATGAACAGCAGGAGGAACCACACCATCGGCGCCGGCGAGCGCGAGCACCTGGATGTGGCGGTCGCCGAGTCGGTGATACGGTGGGCGTCCTGCACCAACCTGTCGACGACGCACTCGCTCC GGNTTCGCTGGTGTGCTAGCATTTTGTTTATCTGTGCAATTCACCATGTGTCCTGTGGCTGTGAGAGT NTTCGCTAGTCTCTTGCCTTCCTCCTTGCACCTGCGATGCAAGCTGAAAGATAAGAGTGAGATGAGTGATGAGATGAGATGAGAGTGTGAGTGGTAGAATGTAACGTGGACCTGATGATATATAATGCTATAGTAGATTACCGAGTAAAAAa                                                              ]
[+] EMBL BI799740             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      T CCGAGGACAGCGGAGGTCCTGAGGGCCCCCGT AAGGGCGAACCCGTCGCGCGCCATCGGCATGAACAGCAGGAGGAACCACACCATCGGCGCCGGCGAGCGCGAGCACCTGGATGTGGCGGTCGCCGAGTCGGTGATACGGTGGGCGTCCTGCACCAACCTGTCGACGACGCACTCGCTCCGGGCTTCGCTGGTGTGCTAGCATTTTGTTTATCTGTGCAATTCACCATGTGTCCTGTGGCTGTGAGAGTGCTTCGCTAGTCTCTTCCCTTCCTCCTTGCACCTGCGATGCAAGCTGAAAGATAAGAGTGAGATGAGTGATGAGATGAGATGAGAGTGTGAGTGGTAGAATGTAACATGGACCTGATGATATATAATGCTATAGTAGATTACCGAGTAAAAA                                                               ]


>consensus_12022#0 CCTCACCCCTCTCTCTCTCGCCCCACCCGGATGCCTCGCGCTGCCGGAGGCTGACCTCGC CGCCGGCGACTCCGCTCGGCCGCCGGAGCAGCCAGCGCGCGCGGATTTTCGAATGTATCA GGTCGACTGAGCTGCGGTTTCCTTCTGATCCCTGGGACAAGGTTTCCGATTCAGCGAAGG AGCTAATAACCGAGATGCTGCGGCGCGATCCTCGACAGAGGCTCACAGCCAAGCAGGTCC TAGAGCATTCCTGGATACAAGATCATGCCGACCAATCCCAAGATTCTTGTGGACATTGCC ATGAGATCAATCTCAGAGGAGAGGACGCCGGCTCATGTTCGTTCTCGACGCCGCTGGCGT CATGCAGCCGCGATGTGAGCTTCAACACCGGTGGCCCGGTCGCCTGCCAAAGCATGTCTG AAGAAGCGTGCTCCCCCACATTCGCCTGCAGATCATCGTTCTCTGCATTTGTCGCTGAGA ATGCTCCGTCGTGCGCGCTCTCGGGGTTCTCCTTCGGTGGCGTCTGCGAACCCTGCAACG CCGTGTTCCCGTCCCCGGTCGCTTCCATGCCGAGCTTCTCCTTCTTCTGCGGCCAAGAAC CCGGCGAGCCTGAGTCGTCGCCTGATGGTGACGCCTTGGGCGAGAAAGCTCACTGCGACG CGACGGTGGTGGCCCTCGTCTCGTCCTCGGCTCCGAGGACAGCGGAGGTCCTGAGGGCCG CCGTAAGGGCGAACCCGTCGCGCGCCATCGGCATGAACAGCAGGAGGAACCACACCATCG GCGCCGGCGAGCGCGAGCACCTGGATGTGGCGGTCGCCGAGTCGGTGATACGGTGGGCGT CCTGCACCAACCTGTCGACGACGCACTCGCTCCGGGCTTCGCTGGTGTGCTAGCATTTTG TTTATCTGTGCAATTCACCATGTGTCCTGTGGCTGTGAGAGTGCTTCGCTAGTCTCTTGC CTTCCTCCTTGCACCTGCGATGCAAGCTGAAAGATAAGAGTGAGATGAGTGATGAGATGA GATGAGAGTGTGAGTGGTAGAATGTAACGTGGACCTGATGATATATAATGCTATAGTAGA TTACCGAGTAAAAAGCTTGCTTTCTGTTTGTTGAATGTGTTCCTTATTTTTGGTCTCCTT TGTGCAAAAAAAAAAAA



consensusID : consensus_12022#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 933
fasta sequence
                              [GGCTCACAGCCAAGCAGGTCCTAGAGCATTCCTGGATACAAGATCATGCCGACCAATCCCAAGATTCTTGTGGACATTGCCATGAGATCAATCTCAGAGGAGAGGACGCCGGCTCATGTTCGTTCTCGACGCCGCTGGCGTCATGCAGCCGCGATGTGAGCTTCAACACCGGTGGCCCGGTCGCCTGCCAAAGCATGTCTGAAGAAGTGTGCTCCCCCACATTCGCCTGCAGATCATCGTTCTCTGCATTTGTCGCCGAGAATGCTCCGTCGTGCGCGCTCTCGGGGTTCTCCTTCGGTGGCGTCTGCGAACCCTGCAACGCCGTGTTCCCGTCCCCGGTCGCTTCCATGCCGAGCTTCTCCTTCTTCTGCGGNCAAGAACCCGGCGAGCCTGAGTCGTCGCCTGATGGTGACGCCTTGGGCGAGAAAGCTTACTGCGACGCGACGGTGGTGGCCNTCGTCTCGTNCTCCGCTCCGAGGACAGCGGAGGTTCTTGAGGGCGGCGTAAAGGCGAAACCCGTTGGCGGCCATTGGTTAAAAAGATGGGGGAACACACCCTTTGGGCCCGGGGGGGCCAGAACCCGGTGGTGGGGGCGGCCACATGTGGATAACGGGGGGGTGCTGTCCCAACCTTTTGGAGAACAACCTCTTCGGGGTTCCTTGGGGGGCAACCTTTTTTTTTTTTTGGTGAATACAACCATTTTTTTGTGGGTTGGGAAAAAAGAAGCNAAAAATTTTTCCCTCCCCCCCCCCCCCGCCGGGGGGGGGGGGAAATNTTNTNNNNNNNTAAAAAAAGAAATGGGGTGGGTGTTTTTTAAAAATGTGGGGGTGGGGTTAAAGAAACCAACCCCCCCCCATTAATTATTTTTGATGTTATATCCCGGGGGGGGGGGTGTGTTTTTAATAAAAAAAAAAAAAAAAAAAAACTAGGAGG]

[+] EMBL BE039984             [GGCTCACAGCCAAGCAGGTCCTAGAGCATTCCTGGATACAAGATCATGCCGACCAATCCCAAGATTCTTGTGGACATTGCCATGAGATCAATCTCAGAGGAGAGGACGCCGGCTCATGTTCGTTCTCGACGCCGCTGGCGTCATGCAGCCGCGATGTGAGCTTCAACACCGGTGGCCCGGTCGCCTGCCAAAGCATGTCTGAAGAAGTGTGCTCCCCCACATTCGCCTGCAGATCATCGTTCTCTGCATTTGTCGCCGAGAATGCTCCGTCGTGCGCGCTCTCGGGGTTCTCCTTCGGTGGCGTCTGCGAACCCTGCAACGCCGTGTTCCCGTCCCCGGTCGCTTCCATGCCGAGCTTCTCCTTCTTCTGCGGNCAAGAACCCGGCGAGCCTGAGTCGTCGCCTGATGGTGACGCCTTGGGCGAGAAAGCTTACTGCGACGCGACGGTGGTGGCCNTCGTCTCGTNCTCCGCTCCGAGGACAGCGGAGGTTCTTGAGGGCGGCGTAAAGGCGAAACCCGTTGGCGGCCATTGGTTAAAAAGATGGGGGAACACACCCTTTGGGCCCGGGGGGGCCAGAACCCGGTGGTGGGGGCGGCCACATGTGGATAACGGGGGGGTGCTGTCCCAACCTTTTGGAGAACAACCTCTTCGGGGTTCCTTGGGGGGCAACCTTTTTTTTTTTTTGGTGAATACAACCATTTTTTTGTGGGTTGGGAAAAAAGAAGCNAAAAATTTTTCCCTCCCCCCCCCCCCCGCCGGGGGGGGGGGGAAATNTTNTNNNNNNNTAAAAAAAGAAATGGGGTGGGTGTTTTTTAAAAATGTGGGGGTGGGGTTAAAGAAACCAACCCCCCCCCATTAATTATTTTTGATGTTATATCCCGGGGGGGGGGGTGTGTTTTTAATAAAAAAAAAAAAAAAAAAAAACTAGGAGG]


>consensus_12022#1 GGCTCACAGCCAAGCAGGTCCTAGAGCATTCCTGGATACAAGATCATGCCGACCAATCCC AAGATTCTTGTGGACATTGCCATGAGATCAATCTCAGAGGAGAGGACGCCGGCTCATGTT CGTTCTCGACGCCGCTGGCGTCATGCAGCCGCGATGTGAGCTTCAACACCGGTGGCCCGG TCGCCTGCCAAAGCATGTCTGAAGAAGTGTGCTCCCCCACATTCGCCTGCAGATCATCGT TCTCTGCATTTGTCGCCGAGAATGCTCCGTCGTGCGCGCTCTCGGGGTTCTCCTTCGGTG GCGTCTGCGAACCCTGCAACGCCGTGTTCCCGTCCCCGGTCGCTTCCATGCCGAGCTTCT CCTTCTTCTGCGGNCAAGAACCCGGCGAGCCTGAGTCGTCGCCTGATGGTGACGCCTTGG GCGAGAAAGCTTACTGCGACGCGACGGTGGTGGCCNTCGTCTCGTNCTCCGCTCCGAGGA CAGCGGAGGTTCTTGAGGGCGGCGTAAAGGCGAAACCCGTTGGCGGCCATTGGTTAAAAA GATGGGGGAACACACCCTTTGGGCCCGGGGGGGCCAGAACCCGGTGGTGGGGGCGGCCAC ATGTGGATAACGGGGGGGTGCTGTCCCAACCTTTTGGAGAACAACCTCTTCGGGGTTCCT TGGGGGGCAACCTTTTTTTTTTTTTGGTGAATACAACCATTTTTTTGTGGGTTGGGAAAA AAGAAGCNAAAAATTTTTCCCTCCCCCCCCCCCCCGCCGGGGGGGGGGGGAAATNTTNTN NNNNNNTAAAAAAAGAAATGGGGTGGGTGTTTTTTAAAAATGTGGGGGTGGGGTTAAAGA AACCAACCCCCCCCCATTAATTATTTTTGATGTTATATCCCGGGGGGGGGGGTGTGTTTT TAATAAAAAAAAAAAAAAAAAAAAACTAGGAGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12022#0      CCTCACCCCTCTCTCTCTCGCCCCACCCGGATGCCTCGCGCTGCCGGAGGCTGACCTCGC 60
consensus_12022#1      ------------------------------------------------------------
                                                                                   

consensus_12022#0      CGCCGGCGACTCCGCTCGGCCGCCGGAGCAGCCAGCGCGCGCGGATTTTCGAATGTATCA 120
consensus_12022#1      ------------------------------------------------------------
                                                                                   

consensus_12022#0      GGTCGACTGAGCTGCGGTTTCCTTCTGATCCCTGGGACAAGGTTTCCGATTCAGCGAAGG 180
consensus_12022#1      ------------------------------------------------------------
                                                                                   

consensus_12022#0      AGCTAATAACCGAGATGCTGCGGCGCGATCCTCGACAGAGGCTCACAGCCAAGCAGGTCC 240
consensus_12022#1      ---------------------------------------GGCTCACAGCCAAGCAGGTCC 21
                                                              *********************

consensus_12022#0      TAGAGCATTCCTGGATACAAGATCATGCCGACCAATCCCAAGATTCTTGTGGACATTGCC 300
consensus_12022#1      TAGAGCATTCCTGGATACAAGATCATGCCGACCAATCCCAAGATTCTTGTGGACATTGCC 81
                       ************************************************************

consensus_12022#0      ATGAGATCAATCTCAGAGGAGAGGACGCCGGCTCATGTTCGTTCTCGACGCCGCTGGCGT 360
consensus_12022#1      ATGAGATCAATCTCAGAGGAGAGGACGCCGGCTCATGTTCGTTCTCGACGCCGCTGGCGT 141
                       ************************************************************

consensus_12022#0      CATGCAGCCGCGATGTGAGCTTCAACACCGGTGGCCCGGTCGCCTGCCAAAGCATGTCTG 420
consensus_12022#1      CATGCAGCCGCGATGTGAGCTTCAACACCGGTGGCCCGGTCGCCTGCCAAAGCATGTCTG 201
                       ************************************************************

consensus_12022#0      AAGAAGCGTGCTCCCCCACATTCGCCTGCAGATCATCGTTCTCTGCATTTGTCGCTGAGA 480
consensus_12022#1      AAGAAGTGTGCTCCCCCACATTCGCCTGCAGATCATCGTTCTCTGCATTTGTCGCCGAGA 261
                       ****** ************************************************ ****

consensus_12022#0      ATGCTCCGTCGTGCGCGCTCTCGGGGTTCTCCTTCGGTGGCGTCTGCGAACCCTGCAACG 540
consensus_12022#1      ATGCTCCGTCGTGCGCGCTCTCGGGGTTCTCCTTCGGTGGCGTCTGCGAACCCTGCAACG 321
                       ************************************************************

consensus_12022#0      CCGTGTTCCCGTCCCCGGTCGCTTCCATGCCGAGCTTCTCCTTCTTCTGCGGCCAAGAAC 600
consensus_12022#1      CCGTGTTCCCGTCCCCGGTCGCTTCCATGCCGAGCTTCTCCTTCTTCTGCGGNCAAGAAC 381
                       **************************************************** *******

consensus_12022#0      CCGGCGAGCCTGAGTCGTCGCCTGATGGTGACGCCTTGGGCGAGAAAGCTCACTGCGACG 660
consensus_12022#1      CCGGCGAGCCTGAGTCGTCGCCTGATGGTGACGCCTTGGGCGAGAAAGCTTACTGCGACG 441
                       ************************************************** *********

consensus_12022#0      CGACGGTGGTGGCCCTCGTCTCGTCCTCGGCTCCGAGGACAGCGGAGGTCCTGAGGGCCG 720
consensus_12022#1      CGACGGTGGTGGCCNTCGTCTCGTNCTCCGCTCCGAGGACAGCGGAGGTTCTTGAGGGCG 501
                       ************** ********* *** ******************** **   ** **

consensus_12022#0      CCGTAAGGGCGAA-CCCGTCGCGCGCCATCGGCATGAACAGCAGGAGGAACCACACCATC 779
consensus_12022#1      GCGTAAAGGCGAAACCCGTTGGCGGCCATTGGT-TAAAAAGATGGGGGAAC-ACACCCTT 559
                        ***** ****** ***** *   ***** **  * ** **  ** ***** ***** * 

consensus_12022#0      GGCGCCGGCGAGCGCGAGCACCTGGATGTGGCGGTCGCCGAGTCGGTGATACGGTGGGCG 839
consensus_12022#1      TGGGCCCGGGGGGGCCAGAACCCGGTGGTGGGGGCGGCCACATGTG-GATAACGGGGGGG 618
                        * *** * * * ** ** *** **  **** **  ***   *  * ****  * *** *

consensus_12022#0      TCCTGCACCAACCTGTCGACGACGCACTCGCTCCGGGCTTCGCTGGTGTGCTAGCATTTT 899
consensus_12022#1      TGCTGTCCCAACCTTTTGGAGA-ACAACCTCTTCGGGGTTCCTTGGGGGGCAACCTTTTT 677
                       * ***  ******* * *  **  **  * ** **** ***  *** * ** * * ****

consensus_12022#0      GTTTATCTGTGCAATTCACCATGTGTCCTGTGGCTGTGAGAGTGCTTCGCTAGTC-TCTT 958
consensus_12022#1      TTTTTTTTGGTGAATACAACCATTTTTTTGTGGGTTGGGAAAAAAGAAGCNAAAAATTTT 737
                        *** * **   *** ** *   * *  ***** *  *  *       ** *    * **

consensus_12022#0      GCCTTCCTCCTTGCACCTGCGATGCAAGCTGAAAGATAAGAGTGAGATGAGTGATGAGAT 1018
consensus_12022#1      TCCCTCCCCCCCCCCCCCGCCGGGGGGGGGGGGAAATNT---TNTNNNNNNNTAAAAAAA 794
                        ** *** **   * ** **   *   *  *  * **     *          *  * * 

consensus_12022#0      GAGATGAGAGTGTGAGTGGTAGAATGTAACGTGGACCTGATGATATATAATGCTATAGTA 1078
consensus_12022#1      GAAATGGG---GTGGGTGTTTTTTAAAAATGTGGGGGTGGGGTTAAAGAAACCAACCCCC 851
                       ** *** *   *** *** *       ** ****   **  * ** * **  * *     

consensus_12022#0      GATTACCGAGTAAAAAGCTTGCTTTCTGTTTGTTGAATGTGTTCCTTATTTTTGGTCTCC 1138
consensus_12022#1      CCCCATTAATTATTTTTGATGTTATATCCCGGGGGGGGGGGTG---TGTTTTTAATAAAA 908
                           *   * **       ** * * *    *  *   * **    * *****  *    

consensus_12022#0      TTTGTGCAAAAAAAAAAAA------ 1157
consensus_12022#1      AAAAAAAAAAAAAAAAACTAGGAGG 933
                              **********        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)