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Oryza sativa
cluster # 12031 cluster # 12031       Sequences # 10       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12031#0 length = 2143 sequences # 9  
 consensus_12031#1 length = 617 sequences # 1  
consensusID : consensus_12031#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 2143
fasta sequence 
                              [AGCCGCAAGCAAAGCCGCCGGAGGAAGGAGCAATCGCGAGTACTCGCCACCATGTACCGGGCGGCGGCGGCGGCGGCGTCGTCGATTTCGAGGTCCTCGTCGGCGCTGCGGAAGCAGCTG-TCGCGCGGCGGTTGCGGGGAGCAGCGGCTGTGGGCGCGGGGGTATGCGGCGAAGGAGGTGGCGTTCGGCGTCGGAGCCCGGGCCGCCTTGCTGCAGGGCGTGAACGACCTCGCCGACGCCGTCAAGGTCACCA-TGGGCCCCAAGGGGCGCAATGTGATTATCGAGAGATCCCATAGAGCTCCCAAAGTCACAAAGGATGGAGTCA-CGGTTGCAAAAAGCATTGAGTTTGAGGACAGTGCTAAGAATGTTGGTGCAAACCTGGTGAAGCAAGTTGCTGAAGCTACTAATAAGGTCGCAGGAGATGGTACCACTTGTGCAACTGTACTTACACAGGCTATTCTTACGGAAGGCTGCAAGGCTGTGGCAG-CAGGGGTCAATGTTATGG-ACTTACGTAATGGCATAAACAAGGCCATAAGTTCTATCACTACACACCTCAAAAGTAAAGCATGGATTATCAACTCCTCAGAAGAAATAAATCAGGTAGCAACTATTTCTGCAAATGGAGAAAAGGAAATAGGAGATTTGATATCAAAGGCGATGGAAAAGGTTGGAAAGGATGGAGTTATTACTATTACTGATGGCAAGACATTAGACAATGAGCTTGAAGCGGTACAGGGAATGAAACTTTCCAGAGGCTACATATCTCCTTACTTTGTGACTGATCAGAAGACTCAGAAGTGTGAGATGGAAAATCCTCTTATTCTAATTCATGACAAGAAAATCTCAACGATGAATTCACTTCTTCCAGTTTTAGAAATGTCTATCAAGAATCGTAGGCCTCTTCTCATCATTGCTGAGGATGTTGAGGGAGAAGCTCTATCAATGCTTGTTCTGAACAAGCATCGTGCTGGATTAAAGATATGTGCTGTCAAAGCTCCTGGATTTGGTGAAAACAGAAGAGCCAATCTGGATGACGTGGCTGTGTTGACAGGAGGAGAGGTTGTCAGCGAGGACCAAGGTCTTGATCTTGGTAAAGTCGAACTACAAATGCTTGGCACTGCTAAAAAGGTTACTGTATCCCTTGATGATACTATCATTCTAGATGGTGGAGGCGACAAACAGCAGATAGA-GGAGAGGTGTCAACAGCTTAGAGAATCAATGGACAAAAGCACTGCTGTATTTGACAAAGAAAAGGCTCAAGAACGTCTATCAAAGTTATCTGGTGGTGTTGCTGTCCTCAAGATTGGGGGAGCTAGTGAAGTTGAAGTTGGTGAGAAAAAAGATAGGGTAACAGACGCTTTACATGCAGCAAGGGCTGCTGTGGAGGAGGGCATTGTACCAGGTGGTGGAGTTGCCCTTCTGTATGCCACCAAGGAGCTTGACAAGATTATCACAGCAAATGAGGATGAAAAGATTGGAGTTCAAATTATCAAGAATGCTTTGAAGGCTCCTTTGATGACTATAGCTGCAAATGCTGGCATTGATGGTGGTGTGGTCATTGGGAAGCTAATTGAACAAGATAATCTTAATATGGGCTATGATGCAGCAAGAGGGGAGTATGTTGACATGATTAAGGCTGGGATCATCGACCCTGTGAAAGTCATCCGAACAGCGCTACAAGATGCATCAAGTGTTTCTTTGCTGATGACAACGACAGAGGCAGCTGTTGCTGAGCCCCCAGCAGCAAAGGCCAGAATGGCT-AGTCGGATGCCGCAGATGAGCGGGATGGATTTTTGAGAGCAAGTAACATGATTTATGATATGTCTTCTCCTGATGTAAGGCAGTGCCCCTCAAATGAAAGGGGTGATTTTTTGAAAGCTATATGACGTGATTTTGTCTTTTCGTGGTGAAAGGCAGTAGTAGTACTTAATATTTCTACAGAATTTCACGGCCCGGGAGAAAGACGTTACAGATATAATTTATTTTAAACTTGGGAATTGGGAATCCGTCTGATGTAAACTGAACTAATGTGGAGCAGCACCTCATTTTGTAGATTACTACATATGTGAAATTGATACTGTGAAAGCTGCAATATTTTACTATGCATTTTGGCAATAATTTTGCCTGCGCAAAAAAAAAAAAA]

[+] EMBL AK070127             [AGCCGCAAGCAAAGCCGCCGGAGGAAGGAGCAATCGCGAGTACTCGCCACCATGTACCGGGCGGCGGCGGCGGCGGCGTCGTCGATTTCGAGGTCCTCGTCGGCGCTGCGGAAGCAGCTG TCGCGCGGCGGTTGCGGGGAGCAGCGGCTGTGGGCGCGGGGGTATGCGGCGAAGGAGGTGGCGTTCGGCGTCGGAGCCCGGGCCGCCTTGCTGCAGGGCGTGAACGACCTCGCCGACGCCGTCAAGGTCACCA TGGGCCCCAAGGGGCGCAATGTGATTATCGAGAGATCCCATAGAGCTCCCAAAGTCACAAAGGATGGAGTCA CGGTTGCAAAAAGCATTGAGTTTGAGGACAGTGCTAAGAATGTTGGTGCAAACCTGGTGAAGCAAGTTGCTGAAGCTACTAATAAGGTCGCAGGAGATGGTACCACTTGTGCAACTGTACTTACACAGGCTATTCTTACGGAAGGCTGCAAGGCTGTGGCAG CAGGGGTCAATGTTATGG ACTTACGTAATGGCATAAACAAGGCCATAAGTTCTATCACTACACACCTCAAAAGTAAAGCATGGATTATCAACTCCTCAGAAGAAATAAATCAGGTAGCAACTATTTCTGCAAATGGAGAAAAGGAAATAGGAGATTTGATATCAAAGGCGATGGAAAAGGTTGGAAAGGATGGAGTTATTACTATTACTGATGGCAAGACATTAGACAATGAGCTTGAAGCGGTACAGGGAATGAAACTTTCCAGAGGCTACATATCTCCTTACTTTGTGACTGATCAGAAGACTCAGAAGTGTGAGATGGAAAATCCTCTTATTCTAATTCATGACAAGAGAATCTCAACGATGAATTCACTTCTTCCAGTTTTAGAAATGTCTATCAAGAATCGTAGGCCTCTTCTCATCATTGCTGAGGATGTTGAGGGAGAAGCTCTATCAATGCTTGTTCTGAACAAGCATCGTGCTGGATTAAAGATATGTGCTGTCAAAGCTCCTGGATTTGGTGAAAACAGAAGAGCCAATCTGGATGACGTGGCTGTGTTGACAGGAGGAGAGGTTGTCAGCGAGGACCAAGGTCTTGATCTTGGTAAAGTCGAACTACAAATGCTTGGCACTGCTAAAAAGGTTACTGTATCCCTTGATGATACTATCATTCTAGATGGTGGAGGCGACAAACAGCAGATAGA GGAGAGGTGTCAACAGCTTAGAGAATCAATGGACAAAAGCACTGCTGTATTTGACAAAGAAAAGGCTCAAGAACGTCTATCAAAGTTATCTGGTGGTGTTGCTGTCCTCAAGATTGGGGGAGCTAGTGAAGTTGAAGTTGGTGAGAAAAAAGATAGGGTAACAGACGCTTTACATGCAGCAAGGGCTGCTGTGGAGGAGGGCATTGTACCAGGTGGTGGAGTTGCCCTTCTGTATGCCACCAAGGAGCTTGACAAGATTATCACAGCAAATGAGGATGAAAAGATTGGAGTTCAAATTATCAAGAATGCTTTGAAGGCTCCTTTGATGACTATAGCTGCAAATGCTGGCATTGATGGTGGTGTGGTCATTGGGAAGCTAATTGAACAAGATAATCTTAATATGGGCTATGATGCAGCAAGAGGGGAGTATGTTGACATGATTAAGGCTGGGATCATCGACCCTGTGAAAGTCATCCGAACAGCGCTACAAGATGCATCAAGTGTTTCTTTGCTGATGACAACGACAGAGGCAGCTGTTGCTGAGCCCCCAGCAGCAAAGGCCAGAATGGCT AGTCGGATGCCGCAGATGAGCGGGATGGATTTTTGAGAGCAAGTAACATGATTTATGATATGTCTTCTCCTGATGTAAGGCAGTGCCCCTCAAATGAAAGGGGTGATTTTTTGAAAGCTATATGACGTGATTTTGTCTTTTCGTGGTGAAAGGCAGTAGTAGTACTTAATATTTCTACAGAATTTCACGGCCCGGGAGAAAGACGTTACAGATATAATTTATTTTAAACTTGGGAATTGGGAATCCGTCTGATGTAAACTGAACTAATGTGGAGCAGCACCTCATTTTGTAGATTACTACATATGTGAAATTGATACTGTGAAAGCTGCAATATTTTACTATGCATTTTGGCAATAATT                       ]
[+] EMBL C73557               [          AAAGCCGCCGGAGGAAGGAGCAATCGCGAGTNCTCGCCACCATGTACCGGGCGGCGGCGGCGGCGGCGTCGTCGATTTCGAGGTCCTCGTCGGCGCTGCGGAA CNG TGTTCGCGCGGCGGTTGCGGGGAGCAGCGGCTGTGGGCGCNGGGGTATGCGGCGAAGGAGGTGGCGTTCGGCGTCGGAGCCCGGGCCGCCTTGCTGCAAGGCGTGAACGAACTCGCCGACNCCGTCAANGTCACCATTGGGCCCCAAAGGGCGCAATGTGATTNTCGAGAGATCCCATAGAGCTCCCAAAGTCACAAANGATGGAGTTANCGGTTGCAAAAAGCATTTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB620914             [                                                                                                                                                                                                                                                                                                                    GTCACAAAGGATGGAGTCA CGGTTGCCAAAAGCATTGAGTTTGAGGACAGTGCTAACAATGTTGGTGCAAACCTGGTGAAGCAAGTTGCTGAAGCTACTAATAAGGTCGCAGGAGATGGTACCACTTGTGCAACTGTACTTACACAGGCTATTCTTACGGAAGGCTGCAAGGCTGTGGCAG CAGGGGTCAATGTTATGG ACTTACGTAATGGCATAAACAAGGCCATAAGTTCTATCACTACACACCTCAAAAGTAAAGCATGGATTATCAACTCCTCAGAAGAAATAAATCAGGTACCAACTATTTCTGCAAATGGAGAAAAGGAAATAGGAGATTTGATATCAAAGGCGATGGAAAAGGTTGGAAAGGATGGAGTTATTACTATTACTGATGGCAAGACATTACACAATGAGCTTGAAGCGGTACAGGGAATGAAACTTTCCAGAGGCTACATATCTCCTTACTTTGTGACTGATCACAAGACTCAGAAGTGTGAGATGGAAAATCCTCTTATTCTAATTCATGACAAGAAAATCTCAACGATGAATTCACTTCTTCCAGTTTTAGAAATGTCTATCAAGAATCGTAGGCCTCTTCTCATCATTGCTGAGGATGTTGAGGGAGAAGCTCTATCAATGCTTGTTCTGAACAAGCATCGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL D42232               [                                                                                                                                                                                                                                                                                                                             GATGGAGTTA CGGTTGCAAAAAGCATTGAGTTTGAGGACAGTGCTAAGAATGTTGGTGCAAACCTGGTGAAGCAAGTTGCTGAAGCTACTAATAAGGTCGCAGGAGATGGTACCACTTGTGCAACTGTACTTACACAGGCTA TCTTACGTAAGGCTGCAAGGCTGTGGCAGTCAGGGGTCAA GTATTGGTACTTACGTAAGGTCATAAACAAGGCCATAAGTTCTATCACTACACACCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF322681             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CTTACTTTGTGACTGATCAGAAGACTCAGAAGTGTGAGATGGAAAATCCTCTTATTCTAATTCATGACAAGAAAATCTCAACGATGAATTCACTTCTTCCAGTTTTAGAAATGTCTATCAAGAATCGTAGGCCTCTTCTCATCATTGCTGAGGATGTTGAGGGAGAAGCTCTATCAATGCTTGTTCTGAACAAGCATCGTGCTGGATTAAAGATATGTGCTGTCAAAGCTCCTGGATTTGGTGAAAACAGAAGAGCCAATCTGGATGACGTGGCTGTGTTGACAGGAGGAGAGGTTGTCAGCGAGGACCAAGGTCTTGATCTTGGTAAAGTCGAACTACAAATGCTTGGCACTGCTAAAAAGGTTACTGTATCCCTTGATGATACTATCATTCTAGATGGTGGAGGCGACAAACAGCAGATAGAGGGAGAGGTGTCAACAGCTTAGAGAATCAATGGACAAAAGCACTGCTGTATTTGACAAAGAAAAGGCTCAAGAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB620915             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAGTTGGTGAGAAAAAAGATAGGGTAACAGACGCTTTACATGCAGCAAGGGCTGCTGTGGAGGAGGGCATTGTACCAGGTGGTGGAGTTGCCCTTCTGTATGCCACCAAGGAGCTTGACAAGATTATCACAGCAAATGAGGATGAAAAGATTGGAGTTCAAATTATCAAGAATGCTTTGAAGGCTCCTTTGATGACTATAGCTGCAAATGCTGGCATTGATGGTGGTGTGGTCATTGGGAAGCTAATTGAACAAGATAATCTTAATATGGGCTATGATGCAGCAAGAGGGGAGTATGTTGACATGATTAAGGCTGGGATCATCGACCCTGTGAAAGTCATCCGAACAGCGCTACAAGATGCATCAAGTGTTTCTTTGCTGATGACAACGACAGAGGCAGCTGTTGCTGAGCCCCCAGCAGCAAAGGCCAGAATGGCT AGTCGGATGCCGCAGATGAGCGGGATGGATTTTTGAGAGCAAGTAACATGATTTATGATATGTCTTCTCCTGATGTAAGGCAGTGCCCCTCAAATGAAAGGGGTGATTTTTTGAAAGCTATATGACGTGATTTTGTCTTTTCGTGGTGAAAGGCAGTAGTAGTACTTAATATTTTTACAGAATTTCACGGCCCGGGAGAAAGACGTTACAGATATAATTTATTTTAAACTTGGGAATTGGGAATCCGTCTGATGTAAACTGAACTAATGTGGAGCAGCCCCTCATTTTGTAGATTACTACATATGTGAAATTGATACTGTGAAAGCTGCAA                                                   ]
[-] EMBL CA762611             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGGATGAAAAGATGNGAGTTCAAATTATCAAGAAGGCTTTGAAGGCTCCTNTGATGACTATAGCTGCAAATGCTGGCATTGATGGTGGTGTGGTCATTGGGAAGCTAATTGAACAAGATAATCTTAATATGGGCTATGATGCAGCAAGAGGGGAGTATGTTGACATGATTAAGGCTGGGATCATCGACCCTGTGAAAGTCATCCGAACAGCGCTACAAGATGCATCAAGTGTTTCTTTGCTGATGACAACGACAGAGGCAGCTGTTGCTGAGCCCCCAGCAGCAAAGGCCAGAATGGCC AGTCGGATGCCGCAGATGAGCGGGATGGATTTTTGAGAGCAAGTAACATGATTTATGAAATGTCTTCTCCTGATGTAAGGCAGTGCCCCTCAAATGAAAGGGGTGATTTTTTGAAAGCTATATGACGTGA TTTGTCTTTTCGTGGTGAAAGGCGGTAGTAGTACTTAATATTTCTACAGAATTTCACGGCCCGGGAGAAAGACGTTACAGATATAATTTATTTTAAACTTGGGAATCCGGAATCCGTTTGATGTAAACTGAACTAATGTGG   AGCACCTCATTTTGTAGATTACTACATATGTGAAATTGATACTGTGAAAGCTGCAATATTTTACTATGCATTTTGGCAATAATTTTGCCTGCGCAAAAAAAAAAAAA]
[+] EMBL OS0880A              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAGTTCAAATTATCAAGAATGCTTTGAAGGCTCCTTTGATGACTATAGCTGCAAATGCTGGCATTGATGGTGGTGTGGTCATTGGGAAGCTAATTGAACAAGATAATCTTAATATGGGCTATGATGCAGCAAGAGGGGAGTATGTTGACATGATTAAGGCTGGGATCATCGACCCTGTGAAAGTCATCCGAACAGCGCTACAAGATGCATCAAGTGTTTCTTTGCTGATGACAACGACAGAGGCAGCTGTNGCTGAGCCCCCAGCAGCAAAGGCCAGAATGGCTAAGTCGGATGCCGCAGATGAGCGGGATGGATT                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB096293             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TAATTGAACAAGATAATCTTAATATGGGCTATGATGCAGCAAGAGGGGAGTATGTTGACATGATTAAGGCTGGGATCATCGACCCTGTGAAAGTCATCCGAACAGCGCTACAAGATGCATCAAGTGTTTCTTTGCTGATGACAACGACAGAGGCAGCTGTTGCTGAGCCCCCAGCAGCAAAGGCCAGAATGGCC AGTCGGATGCCGCAGATGAGCGGGATGGATTTTTGAGAGCAAGTAACATGATTTATGATATGTCTTCTCCTGATGTAAGGCAGTGCCCCTCAAATGAAAGGGGTGATTTTTTGAAAGCTATATGACGTGA TTTGTCTTTTCGTGGTGAAAGGCGGTAGTAGTACTTAATATTTCTACAGAATTTCACGGCCCGGGAGAAAGACGTTACAGATATAATTTATTTTAAACTTGGGAATCCGGAATCCGTCTGATGTAAACTGAACTAATGTGG   AGCACCTCATTTTGTAGATTACTACATATGTGAAATTGATACTGTGAAAGCTGCAATATTTTACTATGCATTTTGGCAATAATTT                      ]




>consensus_12031#0
AGCCGCAAGCAAAGCCGCCGGAGGAAGGAGCAATCGCGAGTACTCGCCACCATGTACCGG
GCGGCGGCGGCGGCGGCGTCGTCGATTTCGAGGTCCTCGTCGGCGCTGCGGAAGCAGCTG
TCGCGCGGCGGTTGCGGGGAGCAGCGGCTGTGGGCGCGGGGGTATGCGGCGAAGGAGGTG
GCGTTCGGCGTCGGAGCCCGGGCCGCCTTGCTGCAGGGCGTGAACGACCTCGCCGACGCC
GTCAAGGTCACCATGGGCCCCAAGGGGCGCAATGTGATTATCGAGAGATCCCATAGAGCT
CCCAAAGTCACAAAGGATGGAGTCACGGTTGCAAAAAGCATTGAGTTTGAGGACAGTGCT
AAGAATGTTGGTGCAAACCTGGTGAAGCAAGTTGCTGAAGCTACTAATAAGGTCGCAGGA
GATGGTACCACTTGTGCAACTGTACTTACACAGGCTATTCTTACGGAAGGCTGCAAGGCT
GTGGCAGCAGGGGTCAATGTTATGGACTTACGTAATGGCATAAACAAGGCCATAAGTTCT
ATCACTACACACCTCAAAAGTAAAGCATGGATTATCAACTCCTCAGAAGAAATAAATCAG
GTAGCAACTATTTCTGCAAATGGAGAAAAGGAAATAGGAGATTTGATATCAAAGGCGATG
GAAAAGGTTGGAAAGGATGGAGTTATTACTATTACTGATGGCAAGACATTAGACAATGAG
CTTGAAGCGGTACAGGGAATGAAACTTTCCAGAGGCTACATATCTCCTTACTTTGTGACT
GATCAGAAGACTCAGAAGTGTGAGATGGAAAATCCTCTTATTCTAATTCATGACAAGAAA
ATCTCAACGATGAATTCACTTCTTCCAGTTTTAGAAATGTCTATCAAGAATCGTAGGCCT
CTTCTCATCATTGCTGAGGATGTTGAGGGAGAAGCTCTATCAATGCTTGTTCTGAACAAG
CATCGTGCTGGATTAAAGATATGTGCTGTCAAAGCTCCTGGATTTGGTGAAAACAGAAGA
GCCAATCTGGATGACGTGGCTGTGTTGACAGGAGGAGAGGTTGTCAGCGAGGACCAAGGT
CTTGATCTTGGTAAAGTCGAACTACAAATGCTTGGCACTGCTAAAAAGGTTACTGTATCC
CTTGATGATACTATCATTCTAGATGGTGGAGGCGACAAACAGCAGATAGAGGAGAGGTGT
CAACAGCTTAGAGAATCAATGGACAAAAGCACTGCTGTATTTGACAAAGAAAAGGCTCAA
GAACGTCTATCAAAGTTATCTGGTGGTGTTGCTGTCCTCAAGATTGGGGGAGCTAGTGAA
GTTGAAGTTGGTGAGAAAAAAGATAGGGTAACAGACGCTTTACATGCAGCAAGGGCTGCT
GTGGAGGAGGGCATTGTACCAGGTGGTGGAGTTGCCCTTCTGTATGCCACCAAGGAGCTT
GACAAGATTATCACAGCAAATGAGGATGAAAAGATTGGAGTTCAAATTATCAAGAATGCT
TTGAAGGCTCCTTTGATGACTATAGCTGCAAATGCTGGCATTGATGGTGGTGTGGTCATT
GGGAAGCTAATTGAACAAGATAATCTTAATATGGGCTATGATGCAGCAAGAGGGGAGTAT
GTTGACATGATTAAGGCTGGGATCATCGACCCTGTGAAAGTCATCCGAACAGCGCTACAA
GATGCATCAAGTGTTTCTTTGCTGATGACAACGACAGAGGCAGCTGTTGCTGAGCCCCCA
GCAGCAAAGGCCAGAATGGCTAGTCGGATGCCGCAGATGAGCGGGATGGATTTTTGAGAG
CAAGTAACATGATTTATGATATGTCTTCTCCTGATGTAAGGCAGTGCCCCTCAAATGAAA
GGGGTGATTTTTTGAAAGCTATATGACGTGATTTTGTCTTTTCGTGGTGAAAGGCAGTAG
TAGTACTTAATATTTCTACAGAATTTCACGGCCCGGGAGAAAGACGTTACAGATATAATT
TATTTTAAACTTGGGAATTGGGAATCCGTCTGATGTAAACTGAACTAATGTGGAGCAGCA
CCTCATTTTGTAGATTACTACATATGTGAAATTGATACTGTGAAAGCTGCAATATTTTAC
TATGCATTTTGGCAATAATTTTGCCTGCGCAAAAAAAAAAAAA

consensusID : consensus_12031#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 617
fasta sequence 
                              [GGANTCGCNANGCTTGCTNNGGGGGCCCGAGGACGGGANAGGGGGGNGGNGNGGTCCTTGGGAAGCTATTGAACAAGATAATCTTAATATGGGCTATGATGCAGCAAGAGGGGAGTATGTTGACATGATTANGGCTGGGATCCTCGACCCTGTGAAAGTATCCGAACAGCGCTACAAGATGCATCAAGTGNTTCTTTGCTGATGACANCGACAGAGGCAGCNTGTTGNTGAGCCCCCAGCAGCAAAGGCCAGAATGGCTAGNCGGATGCCGCAGNTGAGCGGGATGGATTTTTGAGAGCAAGTAACATGATTTATGATATGTCTTCTCCTGATGCAAGGCAGNGCCCCTCAAATGAAAGGGGNGATTTTTTGAAAGCTATATGACGTGATTTTGNCTTTTCGNGGNGAAAGGCAGTAGTATNNACTTAATATTTCTACANAATTTCACGGNCCGGNAGAAAGACGTTACAGATATAATTTATTTTAAACTTGGGAATNGCGAATCCGCCTGATGTAAACTGAACTAATGTGGAGCAGCACCTCATTATGTAGATTACTACATATGNGAAANCGATACTGCGAAAGCTGCNANANTTTACTAAAAANANAAAAAAAAA]

[+] EMBL CA764979             [GGANTCGCNANGCTTGCTNNGGGGGCCCGAGGACGGGANAGGGGGGNGGNGNGGTCCTTGGGAAGCTATTGAACAAGATAATCTTAATATGGGCTATGATGCAGCAAGAGGGGAGTATGTTGACATGATTANGGCTGGGATCCTCGACCCTGTGAAAGTATCCGAACAGCGCTACAAGATGCATCAAGTGNTTCTTTGCTGATGACANCGACAGAGGCAGCNTGTTGNTGAGCCCCCAGCAGCAAAGGCCAGAATGGCTAGNCGGATGCCGCAGNTGAGCGGGATGGATTTTTGAGAGCAAGTAACATGATTTATGATATGTCTTCTCCTGATGCAAGGCAGNGCCCCTCAAATGAAAGGGGNGATTTTTTGAAAGCTATATGACGTGATTTTGNCTTTTCGNGGNGAAAGGCAGTAGTATNNACTTAATATTTCTACANAATTTCACGGNCCGGNAGAAAGACGTTACAGATATAATTTATTTTAAACTTGGGAATNGCGAATCCGCCTGATGTAAACTGAACTAATGTGGAGCAGCACCTCATTATGTAGATTACTACATATGNGAAANCGATACTGCGAAAGCTGCNANANTTTACTAAAAANANAAAAAAAAA]




>consensus_12031#1
GGANTCGCNANGCTTGCTNNGGGGGCCCGAGGACGGGANAGGGGGGNGGNGNGGTCCTTG
GGAAGCTATTGAACAAGATAATCTTAATATGGGCTATGATGCAGCAAGAGGGGAGTATGT
TGACATGATTANGGCTGGGATCCTCGACCCTGTGAAAGTATCCGAACAGCGCTACAAGAT
GCATCAAGTGNTTCTTTGCTGATGACANCGACAGAGGCAGCNTGTTGNTGAGCCCCCAGC
AGCAAAGGCCAGAATGGCTAGNCGGATGCCGCAGNTGAGCGGGATGGATTTTTGAGAGCA
AGTAACATGATTTATGATATGTCTTCTCCTGATGCAAGGCAGNGCCCCTCAAATGAAAGG
GGNGATTTTTTGAAAGCTATATGACGTGATTTTGNCTTTTCGNGGNGAAAGGCAGTAGTA
TNNACTTAATATTTCTACANAATTTCACGGNCCGGNAGAAAGACGTTACAGATATAATTT
ATTTTAAACTTGGGAATNGCGAATCCGCCTGATGTAAACTGAACTAATGTGGAGCAGCAC
CTCATTATGTAGATTACTACATATGNGAAANCGATACTGCGAAAGCTGCNANANTTTACT
AAAAANANAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12031#0      AGCCGCAAGCAAAGCCGCCGGAGGAAGGAGCAATCGCGAGTACTCGCCACCATGTACCGG 60
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      GCGGCGGCGGCGGCGGCGTCGTCGATTTCGAGGTCCTCGTCGGCGCTGCGGAAGCAGCTG 120
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      TCGCGCGGCGGTTGCGGGGAGCAGCGGCTGTGGGCGCGGGGGTATGCGGCGAAGGAGGTG 180
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      GCGTTCGGCGTCGGAGCCCGGGCCGCCTTGCTGCAGGGCGTGAACGACCTCGCCGACGCC 240
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      GTCAAGGTCACCATGGGCCCCAAGGGGCGCAATGTGATTATCGAGAGATCCCATAGAGCT 300
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      CCCAAAGTCACAAAGGATGGAGTCACGGTTGCAAAAAGCATTGAGTTTGAGGACAGTGCT 360
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      AAGAATGTTGGTGCAAACCTGGTGAAGCAAGTTGCTGAAGCTACTAATAAGGTCGCAGGA 420
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      GATGGTACCACTTGTGCAACTGTACTTACACAGGCTATTCTTACGGAAGGCTGCAAGGCT 480
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      GTGGCAGCAGGGGTCAATGTTATGGACTTACGTAATGGCATAAACAAGGCCATAAGTTCT 540
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      ATCACTACACACCTCAAAAGTAAAGCATGGATTATCAACTCCTCAGAAGAAATAAATCAG 600
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      GTAGCAACTATTTCTGCAAATGGAGAAAAGGAAATAGGAGATTTGATATCAAAGGCGATG 660
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      GAAAAGGTTGGAAAGGATGGAGTTATTACTATTACTGATGGCAAGACATTAGACAATGAG 720
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      CTTGAAGCGGTACAGGGAATGAAACTTTCCAGAGGCTACATATCTCCTTACTTTGTGACT 780
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      GATCAGAAGACTCAGAAGTGTGAGATGGAAAATCCTCTTATTCTAATTCATGACAAGAAA 840
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      ATCTCAACGATGAATTCACTTCTTCCAGTTTTAGAAATGTCTATCAAGAATCGTAGGCCT 900
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      CTTCTCATCATTGCTGAGGATGTTGAGGGAGAAGCTCTATCAATGCTTGTTCTGAACAAG 960
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      CATCGTGCTGGATTAAAGATATGTGCTGTCAAAGCTCCTGGATTTGGTGAAAACAGAAGA 1020
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      GCCAATCTGGATGACGTGGCTGTGTTGACAGGAGGAGAGGTTGTCAGCGAGGACCAAGGT 1080
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      CTTGATCTTGGTAAAGTCGAACTACAAATGCTTGGCACTGCTAAAAAGGTTACTGTATCC 1140
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      CTTGATGATACTATCATTCTAGATGGTGGAGGCGACAAACAGCAGATAGAGGAGAGGTGT 1200
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      CAACAGCTTAGAGAATCAATGGACAAAAGCACTGCTGTATTTGACAAAGAAAAGGCTCAA 1260
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      GAACGTCTATCAAAGTTATCTGGTGGTGTTGCTGTCCTCAAGATTGGGGGAGCTAGTGAA 1320
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      GTTGAAGTTGGTGAGAAAAAAGATAGGGTAACAGACGCTTTACATGCAGCAAGGGCTGCT 1380
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      GTGGAGGAGGGCATTGTACCAGGTGGTGGAGTTGCCCTTCTGTATGCCACCAAGGAGCTT 1440
consensus_12031#1      ------------------------------------------------------------
                                                                                   

consensus_12031#0      GACAAGATTATCACAGCAAATGAGGATGAAAAGATTGGAGTTCAAATTATCAAGAATGCT 1500
consensus_12031#1      ------------------------------------------------------GGANTC 6
                                                                                   

consensus_12031#0      TTGAAGGCTCCTTTGATGACTATAGCTGCAAATGCTGGCATTGATGGTGGTGTGGTCATT 1560
consensus_12031#1      GCNANGCTTGCTNNGGGGGCC-------CGAGGACGGGANAGGGGGGNGGNGNGGTCCTT 59
                          * *  * **  *  * *        * *   * **    *  ** ** * **** **

consensus_12031#0      GGGAAGCTAATTGAACAAGATAATCTTAATATGGGCTATGATGCAGCAAGAGGGGAGTAT 1620
consensus_12031#1      GGGAAGCTA-TTGAACAAGATAATCTTAATATGGGCTATGATGCAGCAAGAGGGGAGTAT 118
                       ********* **************************************************

consensus_12031#0      GTTGACATGATTAAGGCTGGGATCATCGACCCTGTGAAAGTCATCCGAACAGCGCTACAA 1680
consensus_12031#1      GTTGACATGATTANGGCTGGGATCCTCGACCCTGTGAAAGT-ATCCGAACAGCGCTACAA 177
                       ************* ********** **************** ******************

consensus_12031#0      GATGCATCAAGTGTTTCTTTGCTGATGACAACGACAGAGGCAGCT-GTTGCTGAGCCCCC 1739
consensus_12031#1      GATGCATCAAGTGNTTCTTTGCTGATGACANCGACAGAGGCAGCNTGTTGNTGAGCCCCC 237
                       ************* **************** *************  **** *********

consensus_12031#0      AGCAGCAAAGGCCAGAATGGCTAGTCGGATGCCGCAGATGAGCGGGATGGATTTTTGAGA 1799
consensus_12031#1      AGCAGCAAAGGCCAGAATGGCTAGNCGGATGCCGCAGNTGAGCGGGATGGATTTTTGAGA 297
                       ************************ ************ **********************

consensus_12031#0      GCAAGTAACATGATTTATGATATGTCTTCTCCTGATGTAAGGCAGTGCCCCTCAAATGAA 1859
consensus_12031#1      GCAAGTAACATGATTTATGATATGTCTTCTCCTGATGCAAGGCAGNGCCCCTCAAATGAA 357
                       ************************************* ******* **************

consensus_12031#0      AGGGGTGATTTTTTGAAAGCTATATGACGTGATTTTGTCTTTTCGTGGTGAAAGGCAGTA 1919
consensus_12031#1      AGGGGNGATTTTTTGAAAGCTATATGACGTGATTTTGNCTTTTCGNGGNGAAAGGCAGTA 417
                       ***** ******************************* ******* ** ***********

consensus_12031#0      GTA-GTACTTAATATTTCTACAGAATTTCACGGCCCGGGAGAAAGACGTTACAGATATAA 1978
consensus_12031#1      GTATNNACTTAATATTTCTACANAATTTCACGGNCCGGNAGAAAGACGTTACAGATATAA 477
                       ***   **************** ********** **** *********************

consensus_12031#0      TTTATTTTAAACTTGGGAATTGGGAATCCGTCTGATGTAAACTGAACTAATGTGGAGCAG 2038
consensus_12031#1      TTTATTTTAAACTTGGGAATNGCGAATCCGCCTGATGTAAACTGAACTAATGTGGAGCAG 537
                       ******************** * ******* *****************************

consensus_12031#0      CACCTCATTTTGTAGATTACTACATATGTGAAATTGATACTGTGAAAGCTGCAATATTTT 2098
consensus_12031#1      CACCTCATTATGTAGATTACTACATATGNGAAANCGATACTGCGAAAGCTGCNANANTTT 597
                       ********* ****************** ****  ******* ********* * * ***

consensus_12031#0      ACTATGCATTTTGGCAATAATTTTGCCTGCGCAAAAAAAAAAAAA 2143
consensus_12031#1      ACTAAAAANANAAAAAAAAA------------------------- 617
                       ****   *       ** **


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)