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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12035#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1965 fasta sequence
[GAAGCCAACAATAACGGGAGAAAAGAAAAAAAATTGAGCCGCGGAAGGCCGGAAGGGGACTCCCCGTCGCCTCCTCTCCTCCAAATCCCAACCCACCTCACCGATCCCATCTCAATTCTCACCGCCTCACCGCGCCCGCGCCAGCGCCTCGCCCATGTGATGTGAGTGAGCCACTCACACTCCCCCTCTCTATCGCCGCGCCCCCGATTCGCGAGCCGCCCCGATCCCTCCCGCGCGGCTGATAAATCCGAGGCGGCTAGGGTTGGGGGTGGAATGGGGCAGGAAGGGATGGGGTACAACAACGGCAAGGGGGGAGGAGGCGGTGGCGGCGGGCTGCCGATGACGGCGCCGCGGCCGCGTGGGGCGTCGCCGCTGAGCAGCCACGGCCACCACCACCGCTCGCGCAAGATCCACCGCACCTTCAACAACGTCAAGATCACCGTGCTCTGCGGCCTCGTCACCATCCTCGTCCTCCGCGGCACCATCGGCCTCAACCTCTCCCTCCCCAACCAGCCCACCGACGCCGACGCGCTCGCCGGCGCCAAGGCCGTCGAGGACATCGACCGCATCCTCCGCGAGATCCGCTCCGACGGCGGCGCCGACGACGACGCCGCCGCCGCCGGGGACCTCGCCGGCTCCTTCAACGCCACCGCGCTCAACGCCACGGAGGCGGCGGCGGCCTACGCCTCCGCTGTCGAACGCTACGCGCTCGGCCCCAAGATCTCCGACTGGGACGGTCAGCGCCGCCGCTGGCTCAGGCAGAACCCTGGGTTCCCGTCCACCGTCGCCGGCGGCAAGCCCAGGATCCTGCTCGTCACGGGCTCGCAGCCGGGGCCCTGCGACAACCCGCTCGGCGACCACTACCTGCTCAAGACCACCAAGAACAAGATCGACTACTGCCGCCTCCACGGCATCGAGATCGTCCACAACCTCGCCCACCTCGACACCGAGCTCGCCGGGTACTGGGCCAAGCTGCCTCTGCTCCGCCGCCTCATGCTCTCCCACCCGGAGGTCGAGTGGATCTGGTGGATGGACAGCGACGCGCTCTTCACCGACATGGCTTTCGAGCTGCCCCTCTCGCGCTACCAAGACCGCAACCTCATCATCCATGGATACCAGGATCTCCTCTTTGAGAAGCACTCATGGATCGCGCTCAACACCGGCAGCTTCCTCTTCCGGAATTGCCAGTGGTCGCTTGATCTTCTTGATGCGTGGGCGCCTATGGGTCCCAAGGGATTCAT-CCGAGATGAAGCCGGGAAGATACTTACTGCCAACCTCAAGGGACGCCCGGCATTTGAGGCTGATGATCAGTCTGCTTTGATTTACCTCTTGCTCTCGCAAAAGGAGAAGTGGATGAACAAGGTGTTCATAGAGAATTCGTACTACTTACATGGCTTCTGGGCTGGTCTAGTAGATAAGTACGAGGAGATGATGGAGAACCACCATCCGGGGCTCGGGGATGAGCGGTGGCCATTCGTGACTCATTTTGTCGGGTGCAAGCCATGTGGAAGCTATGGGGATTATCCTGTGGAGCGGTGTCTCAGGAGTATGGAGCGAGCATTTAATTTTGCCGATAACCAGGTGCTGCGGCTCTATGGGTTTGCTCACAAGGGGCTCGAAAGCCCCAAGATCAAGAGGGTCAGGAATCAGACCACAAAGCCTATTGATGACAAGGAGAATCTTGATGTGAAGGCCAAGATATCGACCACTTCTTGAAAAGTCCTGATGAGAGTTGGTATGGCAATAGCATACTTGCTTTGGCTCTCTTCAAGGTCAGAGCATTTTGTGACTTGGGGATGGTGTTGTTTTATTTTCCACTCTTTTTTTCTATTCTTTTTGTTCATGGAATTGTTATTGTTATGTAACAGTTAGAGGTTGCAATCTAATGTTTATCATGGAGTTAAATGTGATAGGGGCTCAAATCAGCAGAAATAGACTTGCCTTTTATTCTGAAAAAAAAAAAGA]
[+] EMBL AK100984 [GAAGCCAACAATAACGGGAGAAAAGAAAAAAAATTGAGCCGCGGAAGGCCGGAAGGGGACTCCCCGTCGCCTCCTCTCCTCCAAATCCCAACCCACCTCACCGATCCCATCTCAATTCTCACCGCCTCACCGCGCCCGCGCCAGCGCCTCGCCCATGTGATGTGAGTGAGCCACTCACACTCCCCCTCTCTATCGCCGCGCCCCCGATTCGCGAGCCGCCCCGATCCCTCCCGCGCGGCTGATAAATCCGAGGCGGCTAGGGTTGGGGGTGGAATGGGGCAGGAAGGGATGGGGTACAACAACGGCAAGGGGGGAGGAGGCGGTGGCGGCGGGCTGCCGATGACGGCGCCGCGGCCGCGTGGGGCGTCGCCGCTGAGCAGCCACGGCCACCACCACCGCTCGCGCAAGATCCACCGCACCTTCAACAACGTCAAGATCACCGTGCTCTGCGGCCTCGTCACCATCCTCGTCCTCCGCGGCACCATCGGCCTCAACCTCTCCCTCCCCAACCAGCCCACCGACGCCGACGCGCTCGCCGGCGCCAAGGCCGTCGAGGACATCGACCGCATCCTCCGCGAGATCCGCTCCGACGGCGGCGCCGACGACGACGCCGCCGCCGCCGGGGACCTCGCCGGCTCCTTCAACGCCACCGCGCTCAACGCCACGGAGGCGGCGGCGGCCTACGCCTCCGCTGTCGAACGCTACGCGCTCGGCCCCAAGATCTCCGACTGGGACGGTCAGCGCCGCCGCTGGCTCAGGCAGAACCCTGGGTTCCCGTCCACCGTCGCCGGCGGCAAGCCCAGGATCCTGCTCGTCACGGGCTCGCAGCCGGGGCCCTGCGACAACCCGCTCGGCGACCACTACCTGCTCAAGACCACCAAGAACAAGATCGACTACTGCCGCCTCCACGGCATCGAGATCGTCCACAACCTCGCCCACCTCGACACCGAGCTCGCCGGGTACTGGGCCAAGCTGCCTCTGCTCCGCCGCCTCATGCTCTCCCACCCGGAGGTCGAGTGGATCTGGTGGATGGACAGCGACGCGCTCTTCACCGACATGGCTTTCGAGCTGCCCCTCTCGCGCTACCAAGACCGCAACCTCATCATCCATGGATACCAGGATCTCCTCTTTGAGAAGCACTCATGGATCGCGCTCAACACCGGCAGCTTCCTCTTCCGGAATTGCCAGTGGTCGCTTGATCTTCTTGATGCGTGGGCGCCTATGGGTCCCAAGGGATTCAT CCGAGATGAAGCCGGGAAGATACTTACTGCCAACCTCAAGGGACGCCCGGCATTTGAGGCTGATGATCAGTCTGCTTTGATTTACCTCTTGCTCTCGCAAAAGGAGAAGTGGATGAACAAGGTGTTCATAGAGAATTCGTACTACTTACATGGCTTCTGGGCTGGTCTAGTAGATAAGTACGAGGAGATGATGGAGAACCACCATCCGGGGCTCGGGGATGAGCGGTGGCCATTCGTGACTCATTTTGTCGGGTGCAAGCCATGTGGAAGCTATGGGGATTATCCTGTGGAGCGGTGTCTCAGGAGTATGGAGCGAGCATTTAATTTTGCCGATAACCAGGTGCTGCGGCTCTATGGGTTTGCTCACAAGGGGCTCGAAAGCCCCAAGATCAAGAGGGTCAGGAATCAGACCACAAAGCCTATTGATGACAAGGAGAATCTTGATGTGAAGGCCAAGATATCGACCACTTCTTGAAAAGTCCTGATGAGAGTTGGTATGGCAATAGCATACTTGCTTTGGCTCTCTTCAAGGTCAGAGCATTTTGTGACTTGGGGATGGTGTTGTTTTATTTTCCACTCTTTTTTTCTATTCTTTTTGTTCATGGAATTGTTATTGTTATGTAACAGTTAGAGGTTGCAATCTAATGTTT ]
[+] EMBL AU071109 [ GGGACTCCCCGTCGCCTCCTCTCCTCCAAATCCCAACCCACCTCACCGATCCCATCTCAATTCTCACCGCCTCACCGCGCCCGCGCCAGCGCCTCGCCCATGTGATGTGAGTGAGCCACTCACACTCCCCCTCTCTATCGCCGCGCCCCCGATTCGCGAGCCGCCCCGATCCCTCCCGCGCGGCTGATAAATCCGAGGCGGCTAGGGTTGGGGGTGGAATGGGGCAGGAAGGGATGGGGTACAACAACGGCAAGGGGGGAGGAGGCGGTGGCGGCGGGCTGCCGATGACGG ]
[+] EMBL OS0260A [ ACAACGTCAAGATCACCGTGCTCTGCGGCCTCGTCACCATCCTCGTCCTCCGCGGCACCATCGGCCTCAACCTCTCCCTCCCCAACCAGCCCACCGACGCCGACGCGCTCGCCGGCGCCAAGGCCGTCGAGGACATCGACCGCATCCTCCGCGAGATCCGCTCCGACGGCGGCGCCGACGACGACGCCGCCGCCGCCGGGGACCTCGCCGGCTCCTTCAACGCCACCGTGCTCAACGCCACGGAGGCGGCGGCGGCCTACG CTCCGCTGTCGAACGCTACG GCTCGGCCCCAAGATCTTCGAATGGGACGGTAAGTGCTGACGGTGGC ]
[-] EMBL CB669167 [ GGTCGCTTGATCTTCTTGATGCGTGGGCGCCTATGGGTCCCAAGGGATTCAT CCGAGATGAAGCCGGGAAGATACTTACTGCCAACCTCAAGGGACGCCCGGCATTTGAGGCTGATGATCAGTCTGCTTTGATTTACCTCTTGCTCTCGCAAAAGGAGAAGTGGATGAACAAGGTGTTCATAGAGAATTCGTACTACTTACATGGCTTCTGGGCTGGTCTAGTAGATAAGTACGAGGAGATGATGGAGAACCACCATCCGGGGCTCGGGGATGAGCGGTGGCCATTCGTGACTCATTTTGTCGGGTGCAAGCCATGTGGAAGCTATGGGGATTATCCTGTGGAGCGGTGTCTCAGGAGTATGGAGCGAGCATTTAATTTTGCCGATAACCAGGTGCTGCGGCTCTATGGGTTTGCTCACAAGGGGCTCGAAAGCCCCAAGATCAAGAGGGTCAGGAATCAGACCACAAAGCCTATTGATGACAAGGAGAATCTTGATGTGAAGGCCAAGATATCGACCACTTCTTGAAAAGTCCTGATGAGAGTTGGTATGGCAATAGCATACTTGCTTTGGCTCTCTTCAAGGTCAGAGCATTTTGTGACTTGGGGATGGTGTTGTTTTATTTTCCACTCTTTTTTTCTATTCTTTTTGTTCATGGAATTGTTATTGTTATGTAACAGTTAGAGGTTGCAATCTAATGTTTATCATGGAGTTAAATGTGATAGGGGCTCAAATCAGCAGAAATAGACTTGCCTTTTATTCTGAAAAAAAAAAAGA]
[-] EMBL CB669166 [ TCATCCCGAGATGAAGCCGGGAAGATATTTTTTGCCAACCTCAAGGGACGCCCGGCATTTGAGGCTGATGATCAGTCTGCTTTGATTTACCTCTTGCTCTCGCAAAAGGAGAAGTGGATGAACAAGGTGTTCATAGAGAATTCGTACTACTTACATGGCTTCTGGGCTGGTCTAGTAGATAAGTACGAGGAGATGATGGAGAACCCCCATCCGGGGCTCGGGGATGAGCGGTGGCCATTCGTGACTCATTTTGTCGGGTGCAAGCCATGTGGAAGCTATGGGGATTATCCTGTGGAGCGGTGTCTCAGGAGTATGGAGCGAGCATTTAATTTTGCCGATAACCAGGTGCTGCGGCTCTATGGGTTTGCTCACAAGGGGCTCGAAAGCCCCAAGATCAAGAGGGTCAGGAATCAGACCACAAAGCCTATTGATGACAAGGAGAATCTTGATGTGAAGGCCAAGATATCGACCACTTCTTGAAAAGTCCTGATGAGAGTTGGTATGGCAATAGCATACTTGCTTTGGCTCTCTTCAAGGTCAGAGCATTTTGTGACTTGGGGATGGTGTTGTTTTATTTTCCACTCTTTTTTTCTATTCTTTTTGTTCAGGGAATTGTTATTGTTATGTAACAGTTAGAGGTTNCAA ]
consensusID : consensus_12035#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1521 fasta sequence
[CCGATCGATCGAGCAGCGGAGGAGCACAGTAGTGTGTAGCTATGGCGGTGACCGGCGGCGGGAGGCCGGCGGTGAGGCAGCAGGCGGCGAGGGGGAAGCAGATGCAGAGGACGTTCAACAACGTCAAGATCACGCTCATCTGCGGCTTCATCACGCTCCTCGTCCTCCGTGGCACCGTCGGCATCAACCTCCTCACCTACGGCGTCGGCGGCGGCGGCGGCTCCGACGCCGTGGCGGCCGCCGAGGAGGCCAGGGTCGTCGAGGACATCGAGCGCATCCTCCGCGAGATCCGCTCCGACACCGACGACGACGACGACGACGAAGAAGAAGAGCCACTCGGCGTCGACGCGTCGACGACAACGACGACCAACTCGACGACGACGACGGCCACGGCGGCGAGGAGGAGGAGCTCGAACCACACCTACACGCTGGGGCCCAAGGTGACGCGGTGGAACGCCAAGCGGCGGCAATGGCTGTCCCGGAACCCGGGGTTCCCGTCCCGCGACGCGCGCGGCAAGCCCAGGATCCTCCTCGTCACCGGGTCGCAGCCGGCGCCGTGCGACGACGCGGCGGGCGACCACTACCTGCTCAAGGCGACCAAGAACAAGATCGACTACTGCCGCATCCACGGCATCGAGATCGTCCACAGCATGGCGCACCTCGACCGCGAGCTCGCCGGCTACTGGGCCAAGCTGCCGCTCCTCCGCCGCCTCATGCTCTCCCACCCGGAGGTGGAGTGGGTGTGGTGGATGGACAGCGACGCGCTCTTCACCGACATGGCGTTCGAGCTCCCGCTCGCCCGCTACGACACCAGCAACCTCGTCATACATGGCTACCCGGAGCTCCTCTTCGCCAAGCGCTCCTGGATCGCCCTCAACACCGGCAGCTTCCTCCTCCGTAACTGCCAATGGTCACTCGAGCTGCTCGACGCGTGGGCGCCCATGGGACCAAAAGGCCGCGTCCGCGACGAGGCCGGGAAGGTTCTGACGGCAAGCTTGACGGGGCGGCCGGCGTTCGAGGCGGACGACCAGTCGGCGCTGATCCACATACTGCTGACGCAAAAGGAGAGGTGGATGGAGAAGGTGTACGTGGAGGACAAGTACTTCCTCCATGGATTCTGGGCGGGGCTCGTGGACAAGTACGAGGAGATGATGGAGAGGCACCACCCGGGCCTCGGCGACGAGCGGTGGCCGTTCGTCACCCACTTCGTCGGGTGCAAGCCGTGCGGCGGCTACGGTGACTACCCGCGGGAGCGCTGCCTGGGCGGCATGGAGCGCGCGTTCAACTTCGCCGACAACCAGGTGCTCCGGCTGTACGGATTCCGGCACCGGTCGCTGGCGAGCGCCCGGGTCCGGCGGGTGGCGAACCGGACGGATAACCCGCTGGTCAACAAGGAGGCCGCGCTCAAGATGGACGCCAAGATCGAGAGCTGAATTTTTTTTATCTGAATTAAGCTTGGAGATAATCAAATGTGTGATCGATGCTACAGATTTTGTTTTATGTGTTTGTTGAATCAAATAC]
[+] EMBL AK110842 [CCGATCGATCGAGCAGCGGAGGAGCACAGTAGTGTGTAGCTATGGCGGTGACCGGCGGCGGGAGGCCGGCGGTGAGGCAGCAGGCGGCGAGGGGGAAGCAGATGCAGAGGACGTTCAACAACGTCAAGATCACGCTCATCTGCGGCTTCATCACGCTCCTCGTCCTCCGTGGCACCGTCGGCATCAACCTCCTCACCTACGGCGTCGGCGGCGGCGGCGGCTCCGACGCCGTGGCGGCCGCCGAGGAGGCCAGGGTCGTCGAGGACATCGAGCGCATCCTCCGCGAGATCCGCTCCGACACCGACGACGACGACGACGACGAAGAAGAAGAGCCACTCGGCGTCGACGCGTCGACGACAACGACGACCAACTCGACGACGACGACGGCCACGGCGGCGAGGAGGAGGAGCTCGAACCACACCTACACGCTGGGGCCCAAGGTGACGCGGTGGAACGCCAAGCGGCGGCAATGGCTGTCCCGGAACCCGGGGTTCCCGTCCCGCGACGCGCGCGGCAAGCCCAGGATCCTCCTCGTCACCGGGTCGCAGCCGGCGCCGTGCGACGACGCGGCGGGCGACCACTACCTGCTCAAGGCGACCAAGAACAAGATCGACTACTGCCGCATCCACGGCATCGAGATCGTCCACAGCATGGCGCACCTCGACCGCGAGCTCGCCGGCTACTGGGCCAAGCTGCCGCTCCTCCGCCGCCTCATGCTCTCCCACCCGGAGGTGGAGTGGGTGTGGTGGATGGACAGCGACGCGCTCTTCACCGACATGGCGTTCGAGCTCCCGCTCGCCCGCTACGACACCAGCAACCTCGTCATACATGGCTACCCGGAGCTCCTCTTCGCCAAGCGCTCCTGGATCGCCCTCAACACCGGCAGCTTCCTCCTCCGTAACTGCCAATGGTCACTCGAGCTGCTCGACGCGTGGGCGCCCATGGGACCAAAAGGCCGCGTCCGCGACGAGGCCGGGAAGGTTCTGACGGCAAGCTTGACGGGGCGGCCGGCGTTCGAGGCGGACGACCAGTCGGCGCTGATCCACATACTGCTGACGCAAAAGGAGAGGTGGATGGAGAAGGTGTACGTGGAGGACAAGTACTTCCTCCATGGATTCTGGGCGGGGCTCGTGGACAAGTACGAGGAGATGATGGAGAGGCACCACCCGGGCCTCGGCGACGAGCGGTGGCCGTTCGTCACCCACTTCGTCGGGTGCAAGCCGTGCGGCGGCTACGGTGACTACCCGCGGGAGCGCTGCCTGGGCGGCATGGAGCGCGCGTTCAACTTCGCCGACAACCAGGTGCTCCGGCTGTACGGATTCCGGCACCGGTCGCTGGCGAGCGCCCGGGTCCGGCGGGTGGCGAACCGGACGGATAACCCGCTGGTCAACAAGGAGGCCGCGCTCAAGATGGACGCCAAGATCGAGAGCTGAATTTTTTTTATCTGAATTAAGCTTGGAGATAATCAAATGTGTGATCGATGCTACAGATTTTGTTTTATGTGTTTGTTGAATCAAATAC]
consensusID : consensus_12035#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 738 fasta sequence
[TGATCTTCTTGATGCGTGGGCGCCTATGGGTCCCAAGGGATTCATCCGAGATGAAGCCGGGAAGATACTTACTGCCAACCTCAAGGGACGCCCGGCATTTGAGGCTGATGATCAGTCTGCTTTGATTTACCTCTTGCTCTCGCAAAAGGAGAAGTGGATGAACAAGGTGTTCATAGAGAATTCGTACTACTTACATGGCTTTTGGGCTGGTTTAGTAGATAAGTACGAGGAGATGATGGAGAACCCCCATCCGGGGCTCGGGGATGAGCGGTGGCCATTCGTGACTCATTTTGTCGGGTGCAAGCCATGTGGAAGCTATGGGGATTATCCTGTGGAGCGGTGTTTCAGGAGTATGGAGCGAGCATTTAATTTTGCCGATAACCAGGTGCTGCGGCTTTATGGGTTTGCTCACAAGGGGCTCGAAAGCCCCAAGATCAAGAGGGTCAGGAATCAGACCCCAAAGCCTATTGATGACAAGGAGAATCTTGATGTGAAGGCCAAGATATCGACCCCTTCTTGAAAAGTCCTGATGAGAGTTGGTATGGCAATAGCATACTTGCTTTGGCTTTTTTCAAGGTCAGAGCATTTTGTGACTTGGGGATGGTGTTGTTTTATTTTCCCCTCTTTTTTTCTATTCTTTTTGTTCATGGAATTGTTATTGTTATGTAACAGTTAGAGGTTGCAATTTAATGTTTATCATGGAGTTAAATGTGAAAAAAAAAAAAAAAAAAAAAGGGA]
[-] EMBL CB648301 [TGATCTTCTTGATGCGTGGGCGCCTATGGGTCCCAAGGGATTCATCCGAGATGAAGCCGGGAAGATACTTACTGCCAACCTCAAGGGACGCCCGGCATTTGAGGCTGATGATCAGTCTGCTTTGATTTACCTCTTGCTCTCGCAAAAGGAGAAGTGGATGAACAAGGTGTTCATAGAGAATTCGTACTACTTACATGGCTTTTGGGCTGGTTTAGTAGATAAGTACGAGGAGATGATGGAGAACCCCCATCCGGGGCTCGGGGATGAGCGGTGGCCATTCGTGACTCATTTTGTCGGGTGCAAGCCATGTGGAAGCTATGGGGATTATCCTGTGGAGCGGTGTTTCAGGAGTATGGAGCGAGCATTTAATTTTGCCGATAACCAGGTGCTGCGGCTTTATGGGTTTGCTCACAAGGGGCTCGAAAGCCCCAAGATCAAGAGGGTCAGGAATCAGACCCCAAAGCCTATTGATGACAAGGAGAATCTTGATGTGAAGGCCAAGATATCGACCCCTTCTTGAAAAGTCCTGATGAGAGTTGGTATGGCAATAGCATACTTGCTTTGGCTTTTTTCAAGGTCAGAGCATTTTGTGACTTGGGGATGGTGTTGTTTTATTTTCCCCTCTTTTTTTCTATTCTTTTTGTTCATGGAATTGTTATTGTTATGTAACAGTTAGAGGTTGCAATTTAATGTTTATCATGGAGTTAAATGTGAAAAAAAAAAAAAAAAAAAAAGGGA]
consensusID : consensus_12035#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 594 fasta sequence
[GTCTAGTAGATAAGTACGAGGAGATGATGGAGAACCACCATCCGGGGCTCGGGGATGAGCGGTGGCCATTCGTGACTCATTTTGTCGGGTGCAAGCCATGTGGAAGCTATGGGGATTATCCTGTGGAGCGGTGTCTCAGGAGTATGGAGCGAGCATTTAATTTTGCCGATAACCAGGTGCTGCGGCTCTATGGGTTTGCTCACAAGGGGCTCGAAAGCCCCAAGATCAAGAGGGTCAGGAATCAGACCACAAAGCCTATTGATGACAAGGAGAATCTTGATGTGAAGGCCAAGATATCGACCACTTCTTGAAAAGTCCTGATGAGAGTTGGTATGGCAATAGCATACTTGCTTTGGCTCTCTTCAAGGTCAGAGCATTTTGTGACTTGGGGATGGTGTTGTTTTATTTTCCACTCTTTTTTTCTATTCTTTTTGTTCATGGAATTGTTATTGTTATGTAACAGTTAGAGGTTGCAATCTAATGTTTATCATGGAGTTAAATGTGATAGGGGCTCAAATCAGCAGAAATAGACTTGCCTTTTATACTGCGTTACATCTCAATGCTACTATGCTAGCTTCTAGTGCAACAAGCAAA]
[+] EMBL AU162344 [GTCTAGTAGATAAGTACGAGGAGATGATGGAGAACCACCATCCGGGGCTCGGGGATGAGCGGTGGCCATTCGTGACTCATTTTGTCGGGTGCAAGCCATGTGGAAGCTATGGGGATTATCCTGTGGAGCGGTGTCTCAGGAGTATGGAGCGAGCATTTAATTTTGCCGATAACCAGGTGCTGCGGCTCTATGGGTTTGCTCACAAGGGGCTCGAAAGCCCCAAGATCAAGAGGGTCAGGAATCAGACCACAAAGCCTATTGATGACAAGGAGAATCTTGATGTGAAGGCCAAGATATCGACCACTTCTTGAAAAGTCCTGATGAGAGTTGGTATGGCAATAGCATACTTGCTTTGGCTCTCTTCAAGGTCAGAGCATTTTGTGACTTGGGGATGGTGTTGTTTTATTTTCCACTCTTTTTTTCTATTCTTTTTGTTCATGGAATTGTTATTGTTATGTAACAGTTAGAGGTTGCAATCTAATGTTTATCATGGAGTTAAATGTGATAGGGGCTCAAATCAGCAGAAATAGACTTGCCTTTTATACTGCGTTACATCTCAATGCTACTATGCTAGCTTCTAGTGCAACAAGCAAA]
[-] EMBL CB648300 [ AGTAGATAAGTACGAGGAGATGATGGAGAACCACCATCCGGGGCTCGGGGATGAGCGGGGGCCATTTGTGACTCATTTTGTCGGGGGCAAGCCATGTGGAAGGTATGGGGATTATCCTGTGGAGCGGTGTTTCAGGAGTATGGAGGGAGCATTTAATTTTGCCGATAACCAGGTGGTGCGGCTTTATGGGTTTGCTCACAAGGGGCTCGAAAGCCCCAAGATCAAGAGGGTCAGGAATCAGGCCACAAAGCCTATTGATGACAAGGAGAATTTTGATGTGAAGGCCAAGATATTGACCAGTTTTTGAAAAGTCTTGA ]
[+] EMBL AU091875 [ GAGTATGGAGCGAGCA TTAA TTTGCCGATAACCAGGTGCTGCGGCTCTATGGG TTGCTCACAA GGGCTCGAAACCCCCAAGATCAAGA GGTCA GAATCAGACCAC AAGCCTATTGATGACAAGGAGAATCTTGATGTGAAGGCCAAGATATCGACCACTTCTTGAAAAGTCCTGATGAGAGTTGGTATGGCAATAGCATACTTGCTTTGGCTCTCTTCAAGGTCAGAGCATTTTGTGACTTGGGGATGGTGTTGTTTTATTTTCCACTCTTTTTTTCTATTCTTTTTGTTCATGGAATTGTTATTGTTATGTAACAGTTAGAGGTTGCAATCTAATGTTTATCATGGNGTT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12035#2 ------------------------------------------------------------
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 GAAGCCAACAATAACGGGAGAAAAGAAAAAAAATTGAGCCGCGGAAGGCCGGAAGGGGAC 60
consensus_12035#1 ------------------------------------------------------------
consensus_12035#2 ------------------------------------------------------------
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 TCCCCGTCGCCTCCTCTCCTCCAAATCCCAACCCACCTCACCGATCCCATCTCAATTCTC 120
consensus_12035#1 ------------------------------------------------------------
consensus_12035#2 ------------------------------------------------------------
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 ACCGCCTCACCGCGCCCGCGCCAGCGCCTCGCCCATGTGATGTGAGTGAGCCACTCACAC 180
consensus_12035#1 ------------------------------------------------------------
consensus_12035#2 ------------------------------------------------------------
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 TCCCCCTCTCTATCGCCGCGCCCCCGATTCGCGAGCCGCCCCGATCCCTCCCGCGCGGCT 240
consensus_12035#1 ------------------------------------------------------------
consensus_12035#2 ------------------------------------------------------------
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 GATAAATCCGAGGCGGCTAGGGTTGGGGGTGGAATGGGGCAGGAAGGGATGGGGTACAAC 300
consensus_12035#1 ----------------------------------------CCGATCGATCGAGCAGCGGA 20
consensus_12035#2 ------------------------------------------------------------
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 AACGGCAAGGGGGGAGGAGGCGGTGGCGGCGGGCTGCCGATGACGGCGCCGCGGCCGCGT 360
consensus_12035#1 GGAGCACAGTAGTGTGTAGCTATGGCGGTGACCGGCGGCGGGAGGCCGGCGGTGAGGCAG 80
consensus_12035#2 ------------------------------------------------------------
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 GGGGCGTCGCCGCTGAGCAGCCACGGCCACCACCACCGCTCGCGCAAGATCCACCGCACC 420
consensus_12035#1 CAGGCGGCGAGGGGGAAGCAGATGCAGAGGACGTTCAACAACGTCAAGATCACGCTCATC 140
consensus_12035#2 ------------------------------------------------------------
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 TTCAACAACGTCAAGATCACCGTGCTCTGCGGCCTCGTCACCATCCTCGTCCTCCGCGGC 480
consensus_12035#1 TGCGGCTTCATCACGCTCCTCGTCCTCCGTGGCACCGTCGGCATCAACCTCCTCACCTAC 200
consensus_12035#2 ------------------------------------------------------------
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 ACCATCGGCCTCAACCTCTCCCTCCCCAACCAGCCCACCGACGCCGACGCGCTCGCCGGC 540
consensus_12035#1 GGCGTCGGCGGCGGCGGCGGCTCCGACGCCGTGGCGGCCGCCGAGGAGGCCAGGGTCGTC 260
consensus_12035#2 ------------------------------------------------------------
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 GCCAAGGCCGTCGAGGACATCGACCGCATCCTCCGCGAGATCCGCTCCGACGGCGGCGCC 600
consensus_12035#1 GAGGACATCGAGCGCATCCTCCGCGAGATCCGCTCCGACACCGACGACGACGACGACGAC 320
consensus_12035#2 ------------------------------------------------------------
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 GACGACGACGCCGCCGCCGCCGGGGACCTCGCCGGCTCCTTCAACGCCACCGCGCTCAAC 660
consensus_12035#1 GAAGAAGAAGAGCCACTCGGCGTCGACGCGTCGACGACAACGACGACCAACTCGACGACG 380
consensus_12035#2 ------------------------------------------------------------
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 GCCACGGAGGCGGCGGCGGCCTACGCCTCCGCTGTCGAACGCTACGCGCTCGGCCCCAAG 720
consensus_12035#1 ACGACGGCCACGGCGGCGAGGAGGAGGAGCTCGAACCACACCTACACGCTGGGGCCCAAG 440
consensus_12035#2 ------------------------------------------------------------
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 ATCTCCGACTGGGACGGTCAGCGCCGCCGCTGGCTCAGGCAGAACCCTGGGTTCCCGTCC 780
consensus_12035#1 GTGACGCGGTGGAACGCCAAGCGGCGGCAATGGCTGTCCCGGAACCCGGGGTTCCCGTCC 500
consensus_12035#2 ------------------------------------------------------------
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 ACCGTCGCCGGCGGCAAGCCCAGGATCCTGCTCGTCACGGGCTCGCAGCCGGGGCCCTGC 840
consensus_12035#1 CGCGACGCGCGCGGCAAGCCCAGGATCCTCCTCGTCACCGGGTCGCAGCCGGCGCCGTGC 560
consensus_12035#2 ------------------------------------------------------------
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 GACAACCCGCTCGGCGACCACTACCTGCTCAAGACCACCAAGAACAAGATCGACTACTGC 900
consensus_12035#1 GACGACGCGGCGGGCGACCACTACCTGCTCAAGGCGACCAAGAACAAGATCGACTACTGC 620
consensus_12035#2 ------------------------------------------------------------
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 CGCCTCCACGGCATCGAGATCGTCCACAACCTCGCCCACCTCGACACCGAGCTCGCCGGG 960
consensus_12035#1 CGCATCCACGGCATCGAGATCGTCCACAGCATGGCGCACCTCGACCGCGAGCTCGCCGGC 680
consensus_12035#2 ------------------------------------------------------------
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 TACTGGGCCAAGCTGCCTCTGCTCCGCCGCCTCATGCTCTCCCACCCGGAGGTCGAGTGG 1020
consensus_12035#1 TACTGGGCCAAGCTGCCGCTCCTCCGCCGCCTCATGCTCTCCCACCCGGAGGTGGAGTGG 740
consensus_12035#2 ------------------------------------------------------------
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 ATCTGGTGGATGGACAGCGACGCGCTCTTCACCGACATGGCTTTCGAGCTGCCCCTCTCG 1080
consensus_12035#1 GTGTGGTGGATGGACAGCGACGCGCTCTTCACCGACATGGCGTTCGAGCTCCCGCTCGCC 800
consensus_12035#2 ------------------------------------------------------------
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 CGCTACCAAGACCGCAACCTCATCATCCATGGATACCAGGATCTCCTCTTTGAGAAGCAC 1140
consensus_12035#1 CGCTACGACACCAGCAACCTCGTCATACATGGCTACCCGGAGCTCCTCTTCGCCAAGCGC 860
consensus_12035#2 --------------------------------------------------------TGAT 4
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 TCATGGATCGCGCTCAACACCGGCAGCTTCCTCTTCCGGAATTGCCAGTGGTCGCTTGAT 1200
consensus_12035#1 TCCTGGATCGCCCTCAACACCGGCAGCTTCCTCCTCCGTAACTGCCAATGGTCACTCGAG 920
consensus_12035#2 CTTCTTGATGCGTGGGCGCCTATGGGTCCCAAGGGATTCATCCGAGATGAAGCCGGGAAG 64
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 CTTCTTGATGCGTGGGCGCCTATGGGTCCCAAGGGATTCATCCGAGATGAAGCCGGGAAG 1260
consensus_12035#1 CTGCTCGACGCGTGGGCGCCCATGGGACCAAAAGGCCGCGTCCGCGACGAGGCCGGGAAG 980
consensus_12035#2 ATACTTACTGCCAACCTCAAGGGACGCCCGGCATTTGAGGCTGATGATCAGTCTGCTTTG 124
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 ATACTTACTGCCAACCTCAAGGGACGCCCGGCATTTGAGGCTGATGATCAGTCTGCTTTG 1320
consensus_12035#1 GTTCTGACGGCAAGCTTGACGGGGCGGCCGGCGTTCGAGGCGGACGACCAGTCGGCGCTG 1040
consensus_12035#2 ATTTACCTCTTGCTCTCGCAAAAGGAGAAGTGGATGAACAAGGTGTTCATAGAGAATTCG 184
consensus_12035#3 ------------------------------------------------------------
consensus_12035#0 ATTTACCTCTTGCTCTCGCAAAAGGAGAAGTGGATGAACAAGGTGTTCATAGAGAATTCG 1380
consensus_12035#1 ATCCACATACTGCTGACGCAAAAGGAGAGGTGGATGGAGAAGGTGTACGTGGAGGACAAG 1100
consensus_12035#2 TACTACTTACATGGCTTTTGGGCTGGTTTAGTAGATAAGTACGAGGAGATGATGGAGAAC 244
consensus_12035#3 -------------------------GTCTAGTAGATAAGTACGAGGAGATGATGGAGAAC 35
consensus_12035#0 TACTACTTACATGGCTTCTGGGCTGGTCTAGTAGATAAGTACGAGGAGATGATGGAGAAC 1440
consensus_12035#1 TACTTCCTCCATGGATTCTGGGCGGGGCTCGTGGACAAGTACGAGGAGATGATGGAGAGG 1160
* * ** ** **********************
consensus_12035#2 CCCCATCCGGGGCTCGGGGATGAGCGGTGGCCATTCGTGACTCATTTTGTCGGGTGCAAG 304
consensus_12035#3 CACCATCCGGGGCTCGGGGATGAGCGGTGGCCATTCGTGACTCATTTTGTCGGGTGCAAG 95
consensus_12035#0 CACCATCCGGGGCTCGGGGATGAGCGGTGGCCATTCGTGACTCATTTTGTCGGGTGCAAG 1500
consensus_12035#1 CACCACCCGGGCCTCGGCGACGAGCGGTGGCCGTTCGTCACCCACTTCGTCGGGTGCAAG 1220
* *** ***** ***** ** *********** ***** ** ** ** ************
consensus_12035#2 CCATGTGGAAGCTATGGGGATTATCCTGTGGAGCGGTGTTTCAGGAGTATGGAGCGAGCA 364
consensus_12035#3 CCATGTGGAAGCTATGGGGATTATCCTGTGGAGCGGTGTCTCAGGAGTATGGAGCGAGCA 155
consensus_12035#0 CCATGTGGAAGCTATGGGGATTATCCTGTGGAGCGGTGTCTCAGGAGTATGGAGCGAGCA 1560
consensus_12035#1 CCGTGCGGCGGCTACGGTGACTACCCGCGGGAGCGCTGCCTGGGCGGCATGGAGCGCGCG 1280
** ** ** **** ** ** ** ** ****** ** * * * ******** **
consensus_12035#2 TTTAATTTTGCCGATAACCAGGTGCTGCGGCTTTATGGGTTTGCTCACAAGGGGCTCGAA 424
consensus_12035#3 TTTAATTTTGCCGATAACCAGGTGCTGCGGCTCTATGGGTTTGCTCACAAGGGGCTCGAA 215
consensus_12035#0 TTTAATTTTGCCGATAACCAGGTGCTGCGGCTCTATGGGTTTGCTCACAAGGGGCTCGAA 1620
consensus_12035#1 TTCAACTTCGCCGACAACCAGGTGCTCCGGCTGTACGGATTCCGGCACCGGTCGCTGGCG 1340
** ** ** ***** *********** ***** ** ** ** *** * *** *
consensus_12035#2 AGCCCCAAGATCAAGAGGGTCAGGAATCAGACCCCAAAGCCTATTGATGACAAGGAGAAT 484
consensus_12035#3 AGCCCCAAGATCAAGAGGGTCAGGAATCAGACCACAAAGCCTATTGATGACAAGGAGAAT 275
consensus_12035#0 AGCCCCAAGATCAAGAGGGTCAGGAATCAGACCACAAAGCCTATTGATGACAAGGAGAAT 1680
consensus_12035#1 AGCGCCCGGGTCCGGCGGGTGGCGAACCGGACGGATAACCCGCTGGTCAACAAGGAGGCC 1400
*** ** * ** * **** *** * *** ** ** * * ********
consensus_12035#2 ---CTTGATGTGAAGGCCAAGATATCGACCCCTTCTTGAAAAGTCCTGATGAGAGTTGGT 541
consensus_12035#3 ---CTTGATGTGAAGGCCAAGATATCGACCACTTCTTGAAAAGTCCTGATGAGAGTTGGT 332
consensus_12035#0 ---CTTGATGTGAAGGCCAAGATATCGACCACTTCTTGAAAAGTCCTGATGAGAGTTGGT 1737
consensus_12035#1 GCGCTCAAGATGGACGCCAAGATCGAGAGCTGAATTTTTTTTATCTGAATTAAGCTTGGA 1460
** * ** * ******** ** * ** ** ** * ****
consensus_12035#2 ATGGCAATAGCATACTTGCTT--TGGCTTTTTTCAAGGTCAGAGCATTTTGTGACTTGGG 599
consensus_12035#3 ATGGCAATAGCATACTTGCTT--TGGCTCTCTTCAAGGTCAGAGCATTTTGTGACTTGGG 390
consensus_12035#0 ATGGCAATAGCATACTTGCTT--TGGCTCTCTTCAAGGTCAGAGCATTTTGTGACTTGGG 1795
consensus_12035#1 --GATAATCAAATGTGTGATCGATGCTACAGATTTTGTTTTATGTGTTTGTTGAATCAAA 1518
* *** ** ** * ** * * * * *** *** *
consensus_12035#2 GATGGTGTTGTTTTATTTTCCCCTCTTTTTTTCTATTCTTTTTGTTCATGGAATTGTTAT 659
consensus_12035#3 GATGGTGTTGTTTTATTTTCCACTCTTTTTTTCTATTCTTTTTGTTCATGGAATTGTTAT 450
consensus_12035#0 GATGGTGTTGTTTTATTTTCCACTCTTTTTTTCTATTCTTTTTGTTCATGGAATTGTTAT 1855
consensus_12035#1 TAC--------------------------------------------------------- 1521
*
consensus_12035#2 TGTTATGTAACAGTTAGAGGTTGCAATTTAATGTTTATCATGGAGTTAAATGTGAAAAAA 719
consensus_12035#3 TGTTATGTAACAGTTAGAGGTTGCAATCTAATGTTTATCATGGAGTTAAATGTGATAGGG 510
consensus_12035#0 TGTTATGTAACAGTTAGAGGTTGCAATCTAATGTTTATCATGGAGTTAAATGTGATAGGG 1915
consensus_12035#1 ------------------------------------------------------------
consensus_12035#2 AA--AAAAAAAAAAAAAGGGA--------------------------------------- 738
consensus_12035#3 GCTCAAATCAGCAGAAATAGACTTGCCTTTTATACTGCGTTACATCTCAATGCTACTATG 570
consensus_12035#0 GCTCAAATCAGCAGAAATAGACTTGCCTTTTATTCTGAAAAAAAAAAAGA---------- 1965
consensus_12035#1 ------------------------------------------------------------
consensus_12035#2 ------------------------
consensus_12035#3 CTAGCTTCTAGTGCAACAAGCAAA 594
consensus_12035#0 ------------------------
consensus_12035#1 ------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||