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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12045#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1440 fasta sequence
[ATAAAAAAATAAAGAAAAGAAAAAAAATACTAGTAGTACTCTCTCTCTACTCCACTCTGCTACTGTGTCTGCGTCGTCGTCTCTCTCCTCTCCGATTCGCGGCGGCGGCGGCGTCTCCGGTCTCCAGCTAATTACAAGGAAGGATGGAGTGGTGGGTGTGGTGATATTTTGTAGTGTTTCCCAATGTGAAAGAAGCTTTTGCAATGGCCCCAGGAAGCAGCATTGTGACCGATATCCCTGAGTCGGATTGTGTATCTGATGGGCTCTCTGAGGCACTCACTGGCATTAGGCTTGATGGAGATTCTACATGCAAGCCCTGGTCTACATCACTTGTCACAGTTGAGCTATCATCGCTGACGGGC-TTGAATGATTTGCTCGAGTGTCCAGTCTGCACAAACTCAATGCGCCCACCTATACTGCAGTGCCCAAATGGTCACACAATATGCTCTAACTGCAAGCATAGGGTGGAGAATCATTGCCCTACTTGTCGCCAAGAACTGGGTAATATCAGATGTTTGGCTCTTGAGAAGGTGGCTGAGTCACTTCAGC-TTCCATGCAAATATCAAAGCCTAGGCTGTGCTGAGATTCATCCTTACCAAAACAAACTTAAGCATGAGGAGCTCTGCAGGTTCAGGCCATATAGTTGTCCATATGCAGGTTCAGAATGCCTGATTGCTGGCGATGTTCCGATGCTTGTCTCTCATCTCATAAACGACCATAAGGTGGACTTGCATGAAGGCTGCACCTTTAACCACCGTTATGTGAAGTCCAACCCTTATGAAGTGGAAAACGCTACATGGATGCTGACGGTTTTCAAGTGTTTTGGACAGCACTTCTGCCTGCATTTTGAGGCATTCCTGCTGGGGATGGCACCAGTGTACATGGCGTTCCTGAGGTTCATGGGCGAGGACAGCGAGGCCCGGAACTTCTGCTACAGCCTGGAGGTGGGCGGGAACGGGCGGAAGCTGACATGGCAGGGCATCCCCCGGAGCATCAGGGACAGCCACAAGAAGGTCCGGGACAGCTTCGACGGCCTCATCATCCACCGGAACATGGCCCTCTTCTTCTCCGGCGGCAACAGGCAGGAGCTCAAGCTGCGGGTTACCGGCCGCATCTGGAAGGAGCAATGACGTGAACGATGCAGCAGCAGTGCTACTGAGACTGATAGCAAATGCCAAGATCTCCCCATTGATGATTCCACGCTGATAGCACATTGTGATGTGCTGGGAGAGGAGAAAAATGGGGAGACTTGTTGTGCATTGATGTACAAATACAATTTGCGGCATGGTGGACTGGCTAGGACACATCTGTAGCCTAGCATGTGTTGAACTTGGAACCTGATTTATTAACACGATGGAAATGAACTTACGGAAGGGAAGGGGAAATCTTTACTAGGATGAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK111795 [ATAAAAAAATAAAGAAAAGAAAAAAAATACTAGTAGTACTCTCTCTCTACTCCACTCTGCTACTGTGTCTGCGTCGTCGTCTCTCTCCTCTCCGATTCGCGGCGGCGGCGGCGTCTCCGGTCTCCAGCTAATTACAAGGAAGGATGGAGTGGTGGGTGTGGTGATATTTTGTAGTGTTTCCCAATGTGAAAGAAGCTTTTGCAATGGCCCCAGGAAGCAGCATTGTGACCGATATCCCTGAGTCGGATTGTGTATCTGATGGGCTCTCTGAGGCACTCACTGGCATTAGGCTTGATGGAGATTCTACATGCAAGCCCTGGTCTACATCACTTGTCACAGTTGAGCTATCATCGCTGACGGGC TTGAATGATTTGCTCGAGTGTCCAGTCTGCACAAACTCAATGCGCCCACCTATACTGCAGTGCCCAAATGGTCACACAATATGCTCTAACTGCAAGCATAGGGTGGAGAATCATTGCCCTACTTGTCGCCAAGAACTGGGTAATATCAGATGTTTGGCTCTTGAGAAGGTGGCTGAGTCACTTCAGC TTCCATGCAAATATCAAAGCCTAGGCTGTGCTGAGATTCATCCTTACCAAAACAAACTTAAGCATGAGGAGCTCTGCAGGTTCAGGCCATATAGTTGTCCATATGCAGGTTCAGAATGCCTGATTGCTGGCGATGTTCCGATGCTTGTCTCTCATCTCATAAACGACCATAAGGTGGACTTGCATGAAGGCTGCACCCTTAACCACCGTTATGTGAAGTCCAACCCTTATGAAGTGGAAAACGCTACATGGATGCTGACGGTTTTCAAGTGTTTTGGACAGCACTTCTGCCTGCATTTTGAGGCATTCCTGCTGGGGATGGCGCCAGTGTACATGGCGTTCCTGAGGTTCATGGGCGAGGACAGCGAGGCCCGGAACTTCTGCTACAGCCTGGAGGTGGGCGGGAACGGGCGGAAGCTGACATGGCAGGGCATCCCCCGGAGCATCAGGGACAGCCACAAGAAGGTCCGGGACAGCTTCGACGGCCTCATCATCCACCGGAACATGGCCCTCTTCTTCTCCGGCGGCAACAGGCAGGAGCTCAAGCTGCGGGTTACCGGCCGCATCTGGAAGGAGCAATGACGTGAACGATGCAGCAGCAGTGCTACTGAGACTGATAGCAAATGCCAAGATCTCCCCATTGATGATTCCACGCTGATAGCACATTGTGATGTGCTGGGAGAGGAGAAAAATGGGGAGACTTGTTGTGCATTGATGTACAAATACAATTTGCGGCATGGTGGACTGGCTAGGACACATCTGTAGCCTAGCATGTGTTGAACTTGGAACCTGATTTATTAACACGATGGAA ]
[+] EMBL C26477 [ AAAAAATACTAGTAGTACTCTCTCTCTACTCCACTCTGCTACTGTGTCTGCGTCGTCGTCTCTCTCCTCTCCGATTCGCGGCGGCGGCGGCGTCTCCGGTCTCCAGCTAATTACAAGGAAGGATGGAGTGGTGGGTGTGGTGATATTTTGTAGTGTTTCCCAATGTGAAAGAAGCTTTTGCAATGGCCCCAGGAAGCAGCATTGTGACCGATATCCCTGAGTCGGATTGTGTATCTGATGGGCTCTCTGAGGCACTCACTGGCATTAGGCTTGATGGAGATTCTACATGCAAGCCCTGGTTTACATCACTTGTCACAGTTGAGCTATCATCGCTGACGGGCTTTGAATGATTTGCTCGAGTGTCCAGTCTGCACAAACTCAATGNG CCACCTATACTGCAGTGCCCAAATGGTCACACAATATGCTCTAACTGCAAGCATAG ]
[+] EMBL CB672640 [ ACTCTGCTACTGTGTCTGCGTCGTCGTCTCTCTCCTCTCCGATTCGCGGCGGCGGCGGCGTCTCCGGTCTCCAGCTAATTACAAGGAAGGATGGAGTGGTGGGTGTGGTGATATTTTGTAGTGTTTCCCAATGTGAAAGAAGCTTTTGCAATGGCCCCAGGAAGCAGCATTGTGACCGATATCCCTGAGTCGGATTGTGTATCTGATGGGCTCTCTGAGGCACTCACTGGCATTAGGCTTGATGGAGATTCTACATGCAAGCCCTGGTCTACATCACTTGTCACAGTTGAGCTATCATCGCTGACGGGC TTGAATGATTTGCTCGAGTGTCCAGTCTGCACAAACTCAATGCGCCCACCTATACTGCAGTGCCCAAATGGTCACACAATATGCTCTAACTGCAAGCATAGGGTGGAGAATCATTGCCCTACTTGTCGCCAAGAACTGGGTAATATCAGATGTTTGGCTCTTGAGAACGTGGCTGAGTCACTTCAGC TTCCATGCAAATATCAAAGCCTACGCTGTGCTGAGATTCATCCTTACCAAAACAAACTTAAGCATGAGGAGCTCTGCAGGTTCAGGCCATATAGTTGTCCATATGCAGGTTCAGAATGCCTGATTGCTGGCGATGTTCCGATGCTTGTCTCTCATCTCATANACCACCA ]
[+] EMBL AK104468 [ TCGTCGTCTCTCTCCTCTCCGATTCGCGGCGGCGGCGGCGTCTCCGGTCTCCAGCTAATTACAAGGAAGGATGGAGTGGTGGGTGTGGTGATATTTTGTAGTGTTTCCCAATGTGAAAGAAGCTTTTGCAATGGCCCCAGGAAGCAGCATTGTGACCGATATCCCTGAGTCGGATTGTGTATCTGATGGGCTCTCTGAGGCACTCACTGGCATTAGGCTTGATGGAGATTCTACATGCAAGCCCTGGTCTACATCACTTGTCACAGTTGAGCTATCATCGCTGACGGGC TTGAATGATTTGCTCGAGTGTCCAGTCTGCACAAACTCAATGCGCCCACCTATACTGCAGTGCCCAAATGGTCACACAATATGCTCTAACTGCAAGCATAGGGTGGAGAATCATTGCCCTACTTGTCGCCAAGAACTGGGTAATATCAGATGTTTGGCTCTTGAGAAGGTGGCTGAGTCACTTCAGC TTCCATGCAAATATCAAAGCCTAGGCTGTGCTGAGATTCATCCTTACCAAAACAAACTTAAGCATGAGGAGCTCTGCAGGTTCAGGCCATATAGTTGTCCATATGCAGGTTCAGAATGCCTGATTGCTGGCGATGTTCCGATGCTTGTCTCTCATCTCATAAACGACCATAAGGTGGACTTGCATGAAGGCTGCACCTTTAACCACCGTTATGTGAAGTCCAACCCTTATGAAGTGGAAAACGCTACATGGATGCTGACGGTTTTCAAGTGTTTTGGACAGCACTTCTGCCTGCATTTTGAGGCATTCCTGCTGGGGATGGCACCAGTGTACATGGCGTTCCTGAGGTTCATGGGCGAGGACAGCGAGGCCCGGAACTTCTGCTACAGCCTGGAGGTGGGCGGGAACGGGCGGAAGCTGACATGGCAGGGCATCCCCCGGAGCATCAGGGACAGCCACAAGAAGGTCCGGGACAGCTTCGACGGCCTCATCATCCACCGGAACATGGCCCTCTTCTTCTCCGGCGGCAACAGGCAGGAGCTCAAGCTGCGGGTTACCGGCCGCATCTGGAAGGAGCAATGACGTGAACGATGCAGCAGCAGTGCTACTGAGACTGATAGCAAATGCCAAGATCTCCCCATTGATGATTCCACGCTGATAGCACATTGTGATGTGCTGGGAGAGGAGAAAAATGGGGAGACTTGTTGTGCATTGATGTACAAATACAATTTGCGGCATGGTGGACTGGCTAGGACACATCTGTAGCCTAGCATGTGTTGAACTTGGAACCTGATTTATTAACACGATGGAAATGAACT ]
[+] EMBL AK119901 [ TCGTCGTCTCTCTCCTCTCCGATTCGCGGCGGCGGCGGCGTCTCCGGTCTCCAGCTAATTACAAGGAAGGATGGAGTGGTGGGTGTGGTGATATTTTGTAGTGTTTCCCAATGTGAAAGAAGCTTTTGCAATGGCCCCAGGAAGCAGCATTGTGACCGATATCCCTGAGTCGGATTGTGTATCTGATGGGCTCTCTGAGGCACTCACTGGCATTAGGCTTGATGGAGATTCTACATGCAAGCCCTGGTCTACATCACTTGTCACAGTTGAGCTATCATCGCTGACGGGC TTGAATGATTTGCTCGAGTGTCCAGTCTGCACAAACTCAATGCGCCCACCTATACTGCAGTGCCCAAATGGTCACACAATATGCTCTAACTGCAAGCATAGGGTGGAGAATCATTGCCCTACTTGTCGCCAAGAACTGGGTAATATCAGATGTTTGGCTCTTGAGAAGGTGGCTGAGTCACTTCAGC TTCCATGCAAATATCAAAGCCTAGGCTGTGCTGAGATTCATCCTTACCAAAACAAACTTAAGCATGAGGAGCTCTGCAGGTTCAGGCCATATAGTTGTCCATATGCAGGTTCAGAATGCCTGATTGCTGGCGATGTTCCGATGCTTGTCTCTCATCTCATAAACGACCATAAGGTGGACTTGCATGAAGGCTGCACCTTTAACCACCGTTATGTGAAGTCCAACCCTTATGAAGTGGAAAACGCTACATGGATGCTGACGGTTTTCAAGTGTTTTGGACAGCACTTCTGCCTGCATTTTGAGGCATTCCTGCTGGGGATGGCACCAGTGTACATGGCGTTCCTGAGGTTCATGGGCGAGGACAGCGAGGCCCGGAACTTCTGCTACAGCCTGGAGGTGGGCGGGAACGGGCGGAAGCTGACATGGCAGGGCATCCCCCGGAGCATCAGGGACAGCCACAAGAAGGTCCGGGACAGCTTCGACGGCCTCATCATCCACCGGAACATGGCCCTCTTCTTCTCCGGCGGCAACAGGCAGGAGCTCAAGCTGCGGGTTACCGGCCGCATCTGGAAGGAGCAATGACGTGAACGATGCAGCAGCAGTGCTACTGAGACTGATAGCAAATGCCAAGATCTCCCCATTGATGATTCCACGCTGATAGCACATTGTGATGTGCTGGGAGAGGAGAAAAATGGGGAGACTTGTTGTGCATTGATGTACAAATACAATTTGCGGCATGGTGGACTGGCTAGGACACATCTGTAGCCTAGCATGTGTTGAACTTGGAACCTGATTTATTAACACGATGGAAATGAACTTACGGAAGGGAAGGGGAAATCTTTACTAGGATGAAGAAAAAAAAAAA ]
[+] EMBL OSC25731 [ GCGGCGTCTCCGGTCTCCAGCTAATTACAAGGAAGGATGGAGTGGTGGGTGTGGTGATATTTTGTAGTGTTTCCCAATGTGAAAGAAGCTTTTGCAATGGCCCCAGGAAGCAGCATTGTGACCGATATCCCTGAGTCGGATTGTGTATCTGATGGGCTCTCTGAGGCACTCACTGGCATTAGGCTTGATGGAGATTCTACATGCAAGCCCTGGTNTACATCACTTGTCACAGTTGAGCTATCATCGCTGACGGGC TTGAATGATTTGCTCGAGTGTCCAGTCTGCACAAACTCAATGCGCCCACCTATACTGCAGTTCCCAAATGGTCACACAATATGCTCTAACTGCAAGCATAGGGTGGAGAATCATTGCCCTACTTGTCGCCAAGAACTGGG ]
[+] EMBL OSC270 [ ATGGAGTGGTGGGTNTGGTGATATTTTGTAGTGTTTCCCAATGTGAAAGAAGCTTTTGCAATGGCCCCAGGAAGCAGCATTGTGACCGATATCCCTGAGTCGGATTGTGTATCTGATGGGCTCTCTGAGGCACTCACTGGCATTAGGCTTGATGGAGATTCTACATGCAAGCCCTGGTCTACATCACTTGTCACAGTTGAGCTATCATCGCTGACGGGC TTGAATGATTTGCTCGAGTGTCCAGTCTGCACAAACTCAATGCGCCCACCTATACTGCAGTTCCCAAATGGTCACACAATATGCTCTAACTGCAAGCATAGGGTGGAGAATCATTGCCCTACTTGTCGCCAAGAACTGGGTAATATCAGATGTTTGGCTCTTGAGAAGGTGGCTGAGTCACTTCAGCTTTCCATGCAAATATCAAAGCCTAGGCTGTGCTGAGATTCATCCTTACC AAACAAACTTAAG ]
[+] EMBL AK111954 [ TAACTGCAAGCATAGGGTGGAGAATCATTGCCCTACTTGTCGCCAAGAACTGGGTAATATCAGATGTTTGGCTCTTGAGAAGGTGGCTGAGTCACTTCAGC TTCCATGCAAATATCAAAGCCTAGGCTGTGCTGAGATTCATCCTTACCAAAACAAACTTAAGCATGAGGAGCTCTGCAGGTTCAGGCCATATAGTTGTCCATATGCAGGTTCAGAATGCCTGATTGCTGGCGATGTTCCGATGCTTGTCTCTCATCTCATAAACGACCATAAGGTGGACTTGCATGAAGGCTGCACCTTTAACCACCGTTATGTGAAGTCCAACCCTTATGAAGTGGAAAACGCTACATGGATGCTGACGGTTTTCAAGTGTTTTGGACAGCACTTCTGCCTGCATTTTGAGGCATTCCTGCTGGGGATGGCACCAGTGTACATGGCGTTCCTGAGGTTCATGGGCGAGGACAGCGAGGCCCGGAACTTCTGCTACAGCCTGGAGGTGGGCGGGAACGGGCGGAAGCTGACATGGCAGGGCATCCCCCGGAGCATCAGGGACAGCCACAAGAAGGTCCGGGACAGCTTCGACGGCCTCATCATCCACCGGAACATGGCCCTCTTCTTCTCCGGCGGCAACAGGCAGGAGCTCAAGCTGCGGGTTACCGGCCGCATCTGGAAGGAGCAATGACGTGAACGATGCAGCAGCAGTGCTACTGAGACTGATAGCAAATGCCAAGATCTCCCCATTGATGATTCCACGCTGATAGCACATTGTGATGTGCTGGGAGAGGAGAAAAATGGGGAGACTTGTTGTGCATTGATGTACAAATACAATTTGCGGCATGGTGGACTGGCTAGGACACATCTGTAGCCTAGCATGTGTTGAACTTGGAACCTGATTTATTAACACGATGGAAATGAACT ]
[+] EMBL AU091536 [ GTCTCTCATCTCATAAACGACCATAA GTGNA TTGCATGAA GCTGCACTTTTAACCACCGTTATGTGAAGTCCACCCTTTATGAAGTGGAAAACGCTACATGGATGCTGACGGTTTTCAAGTGTTTTGGACAGCACTTCTGCCTGCATTTTGAGGCATTCCTGCTGGGGATGGCACCAGTGTACATGGCGTTCCTGAGGTTCATGGGCGAGGACAGCGAGGCCCGGAACTTCTGCTACAGCCTGGAGGTGGNCGGGAACGGGCGGAAGCTGACATGGCAGGGCATCCCCCGGAGCATCAGGGACAGCCACAAGAAGGTCCGGGACAGCTTCGACGGCCTCATCATCCACCGGAACATGGCCCTCTTCTTCTCCGGCGGCAACAGGCAGGAGCTCAAGCTGCGGGTTACCGGCCGCATCTGGAAGGAGCAATGACGTGAACGATGCAGCAGCAGTGCTACTGAGACTGATAGCAAATGCCAAGATCTCCCCATTGATGATTCCACGCTGATAGCACATTGTGATGTGCTGGGAGAGGAGAAAAATGGGGAGACTTGTTGTGCATTGATGTACAAATACAATTTGCGGCATGGTGGACTGGCTAGGACACNTCTGTAGCCTAGCATGTGTTGAACTTGGAACCTGATTTATTAACACGATGGAAATGAACTTACGGAAaaaa ]
[+] EMBL AU091666 [ GCATCAGGGACANCCACAAGAAGGTCCGGGACAGCTTCGACGGCCTCATCATCCACCGGAACATGGCCCTCTTCTTCTCCGGCGGCAACAGGCAGGAGCTCAAGCTGCGGGTTACCGGCCGCATCTGGAAGGNGCAATGACGTGAACGATGCAGCAGCAGTGCTACTGAGACTGATAGCAAATGCCAAGATCTCCCCATTGATGATTCCACGCTGATAGCACATTGTGATGTGCTGGGAGAGGAGAAAAATGGGGAGACTTGTTGTGCATTGATGTACAAATACAATTTGCGGCATGGTGGACTGGCTAGGACACATCTGTAGCCTAGCATGTGTTGAACTTGGAACCTGATTTATTAACNCGATGGAAATGAACTTNCGGAAGGGAAGGGGAAATCTTTACTAGGATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||