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Oryza sativa
cluster # 12058 cluster # 12058       Sequences # 10       consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12058#0 length = 2299 sequences # 6  
consensus_12058#1 length = 2046 sequences # 2  
 consensus_12058#2 length = 512 sequences # 1  
consensus_12058#3 length = 432 sequences # 1  
consensusID : consensus_12058#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2299
fasta sequence 
                              [AACTTGACGCCGCCCTCGCTCACACGCTCGCCGCCCGCTTCCCCTCCTCATCAAGATAAGGCGGGAAACCCAGCTGCGGCTGCGGATTCCAGAAGGTTCTGGAAGCTTCTGGGGCACCCCACGCACAGCCGCCGGCGCCCGGCCCGGTGCCGGAAGAGGCTGCATGCATGAGTAGTCGCGCCGCCGCCGTAGAGGAGCAGCATGGGGATGGTCACCGCCACCGCCGCCGCCGCCCTCCTCGCCTCGCCGCCGCAGGGTCATCTTGGAAGGCGGTGTCACCTCGTGGTGCCCGGGCTACGGCTGAGGCCTCCGGCCAGCTCATCTCCTCCCCACGCCGCCCCGCCGCTCAGGTTAAGCAATTTTGTCCCAAGGTGTTACATCACAAATGTTGAGGTTGATGTTAGTCATACGAGTGAACAAGAGGCTCTAGATGATCACCCACCATTGTTGCCAGCCTGCGCCATTCCAGTTGTACACCTACGAGATGTTCCGGATGCTAGTCCTTTTCCCCTGCATGAGAGTGCTTCCCATTCTACTGATTTTGAAGAGCTACCCGTCTTGTCTGAGGGTGAGCTACATACTATAGCGGCCACCCCTGCCCACCCTGCTGGATTATATGCTCTATACGCTAGCTACTTATTTGGTAACTTGGTGGAACAACTTTGGAATTTTGCTTGGCCTGCTGCACTGGCAATTCTCCATCCAAGCCTATTGCCTGTGGCTATTGTCGGTTTCTTCACAAAGCTTTCAGTCTTTATTGGGGCACCAATAGTAGGGAAACTTATGGATCATTTCCCTCGAATACCTATGTACACAGGGTTGAATGCTGTCCAGGTAGCCACTCAGTTGATATCAGCTGCAATGGTCATCTATGCTATGAAGAATGTGACCCATGCATCTACGTCCGCCGTAGTTCTCAAACCTTGGTTTATCGCACTAGTGGCAGCTGGAGCTATTGAAAGGCTTGCAGGATTGGCACTAGGAGTTGCTATGGAGCGGGACTGGGTTGTGTTGTTAGCAGGAACTAACAGGCCAGTTGCATTAGCTCAAGCTAACGCTGTGCTTAATCGACTTGATCTTGTTTGTGAGACTGTTGGTGCTTCAGTTTTTGGCCTTCTGCTGTCCAAATATCATCCAGTAACCTGTTTGAAGATTGCTTGTGGTCTAATGATATGCAGTTTCCCTGTCCTGGTTGTGTTGGGTCAACTGATTAACAGATTCTCCTGCCATGCTCTTGATTCCTCTAGAACCCCGAGTGAAGAATCTATCTGTGCCAATCTATTGGATGTTCGTAAGATTGTTCAAAATGGCTTGAGTGCTATCAGAAATGGCTGGAATGAGTATAAGCAGCAAACAGTTCTACCTGCAAGTGTAGCTACCGTGTTTCTAAATTTCAATGTAGCACTTGCTCCTGGTGCTATAATGACTGCGCTATTGATGCATCGTGGTATTAGTCCGTCGATTGTTGGTGCTTTTAGTGGATTGTGTTCTATCATGGGCCTTGTTGCGACATTCATCTCCTCAAGCTTGGTGGAAAGAGTTGGAATTCTAAAGGCAGGAGCAGCTGGATTGATAGTTCAAGCTTCACTCTTGTCGGT-CGCTCTCGTAGTGTATTGGACTGGTTCTATTTCACAGAGGACACCTCTACTTATCTTCCTGGCTGCTATCGCATTATCTCGGTTGGGGCACATGTCATATGATGTTGTGGGTACACAGATTCTCCAAACAGGTGTTCCTGCATCAAAAGCAAATCTTATTGGTGGAATGGAGGTCTCAATATCAAGCCTTGCAGAACTAGTCATGCTTGGTATGGCCATCATCGCAAACGACGTTTCTCATTTCGGTTTCTTGGCAATCCTATCCGTGTCATCGGTTGCTGGTGCGGCATGGATGTTCTGCCAGTGGTTGGGAAATCCTACAGATGAGCAGAGGGAACTGTTCATGTTTGATCCCCATTTCCAAGTTGAACCAATATAATGAACAAGGCATGTTCTAAAGTAGCTGGGAAAGTTACATCACATGCTGCGTGTGCTTGGCGTCAGAAGAGGGCTCTGCAATGCCCTGAAGACGCTGTGACATTTTGATTCAATACAATATACACTTAGGATACAGTCATTTGTTACTATTAGCCCAAGCCATGCGTAGAATTCAACTTGTACACCCTTTTTTTTCACCTCACATGCTGTACAGTTCATCTACCATGGGCTTAGTTGTTTTTTGTAGGCTTGTAGCTGATGTAGAGCACCATAACAATCAGTTGCAATAACAAAATCAATAGCATTCTCTCTAAAAAAAAAAA]

[+] EMBL AK064831             [AACTTGACGCCGCCCTCGCTCACACGCTCGCCGCCCGCTTCCCCTCCTCATCAAGATAAGGCGGGAAACCCAGCTGCGGCTGCGGATTCCAGAAGGTTCTGGAAGCTTCTGGGGCACCCCACGCACAGCCGCCGGCGCCCGGCCCGGTGCCGGAAGAGGCTGCATGCATGAGTAGTCGCGCCGCCGCCGTAGAGGAGCAGCATGGGGATGGTCACCGCCACCGCCGCCGCCGCCCTCCTCGCCTCGCCGCCGCAGGGTCATCTTGGAAGGCGGTGTCACCTCGTGGTGCCCGGGCTACGGCTGAGGCCTCCGGCCAGCTCATCTCCTCCCCACGCCGCCCCGCCGCTCAGGTTAAGCAATTTTGTCCCAAGGTGTTACATCACAAATGTTGAGGTTGATGTTAGTCATACGAGTGAACAAGAGGCTCTAGATGATCACCCACCATTGTTGCCAGCCTGCGCCATTCCAGTTGTACACCTACGAGATGTTCCGGATGCTAGTCCTTTTCCCCTGCATGAGAGTGCTTCCCATTCTACTGATTTTGAAGAGCTACCCGTCTTGTCTGAGGGTGAGCTACATACTATAGCGGCCACCCCTGCCCACCCTGCTGGATTATATGCTCTATACGCTAGCTACTTATTTGGTAACTTGGTGGAACAACTTTGGAATTTTGCTTGGCCTGCTGCACTGGCAATTCTCCATCCAAGCCTATTGCCTGTGGCTATTGTCGGTTTCTTCACAAAGCTTTCAGTCTTTATTGGGGCACCAATAGTAGGGAAACTTATGGATCATTTCCCTCGAATACCTATGTACACAGGGTTGAATGCTGTCCAGGTAGCCACTCAGTTGATATCAGCTGCAATGGTCATCTATGCTATGAAGAATGTGACCCATGCATCTACGTCCGCCGTAGTTCTCAAACCTTGGTTTATCGCACTAGTGGCAGCTGGAGCTATTGAAAGGCTTGCAGGATTGGCACTAGGAGTTGCTATGGAGCGGGACTGGGTTGTGTTGTTAGCAGGAACTAACAGGCCAGTTGCATTAGCTCAAGCTAACGCTGTGCTTAATCGACTTGATCTTGTTTGTGAGACTGTTGGTGCTTCAGTTTTTGGCCTTCTGCTGTCCAAATATCATCCAGTAACCTGTTTGAAGATTGCTTGTGGTCTAATGATATGCAGTTTCCCTGTCCTGGTTGTGTTGGGTCAACTGATTAACAGATTCTCCTGCCATGCTCTTGATTCCTCTAGAACCCCGAGTGAAGAATCTATCTGTGCCAATCTATTGGATGTTCGTAAGATTGTTCAAAATGGCTTGAGTGCTATCAGAAATGGCTGGAATGAGTATAAGCAGCAAACAGTTCTACCTGCAAGTGTAGCTACCGTGTTTCTAAATTTCAATGTAGCACTTGCTCCTGGTGCTATAATGACTGCGCTATTGATGCATCGTGGTATTAGTCCGTCGATTGTTGGTGCTTTTAGTGGATTGTGTTCTATCATGGGCCTTGTTGCGACATTCATCTCCTCAAGCTTGGTGGAAAGAGTTGGAATTCTAAAGGCAGGAGCAGCTGGATTGATAGTTCAAGCTTCACTCTTGTCGGT CGCTCTCGTAGTGTATTGGACTGGTTCTATTTCACAGAGGACACCTCTACTTATCTTCCTGGCTGCTATCGCATTATCTCGGTTGGGGCACATGTCATATGATGTTGTGGGTACACAGATTCTCCAAACAGGTGTTCCTGCATCAAAAGCAAATCTTATTGGTGGAATGGAGGTCTCAATATCAAGCCTTGCAGAACTAGTCATGCTTGGTATGGCCATCATCGCAAACGACGTTTCTCATTTCGGTTTCTTGGCAATCCTATCCGTGTCATCGGTTGCTGGTGCGGCATGGATGTTCTGCCAGTGGTTGGGAAATCCTACAGATGAGCAGAGGGAACTGTTCATGTTTGATCCCCATTTCCAAGTTGAACCAATATAATGAACAAGGCATGTTCTAAAGTAGCTGGGAAAGTTACATCACATGCTGCGTGTGCTTGGCGTCAGAAGAGGGCTCTGCAATGCCCTGAAGACGCTGTGACATTTTGATTCAATACAATATACACTTAGGATACAGTCATTTGTTACTATTAGCCCAAGCCATGCGTAGAATTCAACTTGTACACCCTTTTTTTTCACCTCACATGCTGTACAGTTCATCTACCATGGGCTTAGTTGTTTTTTGTAGGCTTGTAGCTGATGTAGAGCACCATAACAATCAGTTGCAATAACAAAATCAATAGC                    ]
[+] EMBL CB637541             [           GCCCTCGCTCACACGCTCGCCGCCCGCTTCCCCTCCTCATCAAGATAAGGCGGGAAACCCAGCTGCGGCTGCGGATTCCAGAAGGTTCTGGAAGCTTCTGGGGCACCCCACGCACAGCCGCCGGCGCCCGGCCCGGTGCCGGAAGAGGCTGCATGCATGAGTAGTCGCGCCGCCGCCGTAGAGGAGCAGCATGGGGATGGTCACCGCCACCGCCGCCGCCGCCCTCCTCGCCTCGCCGCCGCAGGGTCATCTTGGAAGGCGGTGTCACCTCGTGGTGCCCGGGCTACGGCTGAGGCCGCCGGCCAGCTCATCTCCTCCCCACGCCGCCCCGCCGCTCAGGTTAAGCAATTTTGTCCCAAGGTGTTACATCACAAATGTTGAGGTTGATGTTAGTCATACGAGTGAACAAGAGGCTCTAGATGATCACCCACCATTGTTGCCAGCCTGCGCCATTCCAGTTGTACACCTACGAGATGTTCCGGATGCTAGTCCTTTTCCCCTGCATGAGAGTGCTTCCCATTCTACTGATTTTGAAGAGCTACCCGTCTTGTCTGAGGGTGAGCTACATACTATAGCGGCCACCCCTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU096258             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGTNCGTTCTCGTAGTGTATTGGACTGGTTCTATTTCACAGAGGACACCTCTACTTATCTTCCTGGCTG TATCGCATTATCTCGGTTGGGGCACATGTCATATGATGTTGTGGGTACACAGATTCTCCAAACAGGTGTTCCTGCATCAAAAGCAAATCTTATTGGTGGAATGGAGGTCTCAATATCAAGCCTTGCAGAACTAGTCATGCTTGGTATGGCCATCATCGCAAACGACGTTTCTCATTTCGGTTTCTTGGCAATCCTATCCGTGTCATCGGTTGCTGGTGCGGCATGGATGTTCTGCCAGTGGTTGGGAAATCCTACAGATGAGCAGAGGGAACTGTTCATGTTTGATCCCCATTTCCAAGTTGAACCAATATAATGAACAAGGCATGTTCTAAAGTAGCTGGGAAAGTTACATCACATGCTGCGTGTGCTTGGCGTCAGAAGAGGGCTCTGCAATGCCCTGAAGACGCTGTGACATTTTGATTCAATACAATATACACTTAGGATACAGTCATTTGTTACTATTAGCCCAAGCCATGCGTAGAATTCAACTTGTACACCCTTTTTTTTCACCTCACATGCTGTACAGTTCATCTACCATGGGCTTAGTTGTTTTTTGTAGGCTTGTAGCTGATGTAGAGCACCATAACAATCAGTTGCAATAACAAAATCAATAGCATTCTCTCTAAAAAAAAAAA]
[-] EMBL CB637542             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATCTCGGTTGGGGCACATGTCATATGATGTTGTGGGTACACAGATTCTCCAAACAGGTGTTCTTGCATCAAAAGCAAATCTTATTGGTGGAATGGAGGTCTCAATATCAAGCCTTGCAGAACTAGTCATGCTTGGTATGGCCATCATCGCAAACGACGTTTCTCATTTCGGTTTCTTGGCAATCCTATCCGTGTCATCGGTTGCTGGTGCGGCATGGATGTTCTGCCAGTGGTTGGGAAATCCTACAGATGAGCAGAGGGAACTGTTCATGTTTGATCCCCATTTCCAAGTTGAACCAATATAATGAACAAGGCATGTTCTAAAGTAGCTGGGAAAGTTACATCACATGCTGCGTGTGCTTGGCGTCAGAAGAGGGCTCTGCAATGCCCTGAAGACGCTGTGACATTTTGATTCAATACAATATACACTTAGGATACAGTCATTTGTTACTATTAGCCCAAGCCATGCGTAGAATTCAACTTGTACA CCTTTTTTTTCACCTCACATGCTGTACAGTTCATCTACCATGGGCTTAGTTGTTTTTTGTAGGCTTGTAGCTGATGTAGAGCACCATAACAATCAGTTGCAATAACAAAATCAATA                      ]
[-] EMBL CB678287             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGCACATGTCATATGATGTTGTGGGTACACAGATTCTCCAAACAGGTGTTCCTGCATCAAAAGCAAATATTATTGGTGGAATGGAGGTCTCAATATCAAGCCTTGCAGAACTAGTCATGCTTGGTATGGCCATCATAGCAAAAGAGGTTTATCATTTGGGTTTTTTGGCAATCCTATCCGTGTCATCGGTTGGTGGTGCGGCATGGATGTTCTGCCAGTGGTTGGGAAATCTTCCAGATGAGCAGAGGGAACTGTTCATGTTTGATCCCCATTTCCAAGTTGAACCAATATAATGACCAAGGCATGTTGTAAAGTAGCTGGGAAAGTTACATCACATGCTGCGTGTGCTTGGCGTCAGAAGAGGGGTGTGCAATGCCCTGAAGACGATGTGCCATTTTGATTCAATCCAATATACACTTAGGATACAGTCATTTGTTAATATTAGCCCAAGCCATGTGTAGAATTCAAGTTGTACACCATT                                                                                                                                      ]
[+] EMBL CF195923             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GAACCAATATAATGAACAAGGCATGTTCTAAAGTAGCTGGGAAAGTTACATCACATGCTGCGTGTGCTTGGCGTCAGAAGAGGGCTCTGCAATGCCCTGAAGATGCTGTGACATTTTGATTCAATACAATATACACTTAGGATACAGTCATTTGTTACTATTAGCCCAAGCCATGCGTAGAATTCAACTTGTACACCCTTTTTTTTCACCTCACATGCTGTACAGTTCATCTACCATGGGCTTAGTTGTTTGTTGTNNNCTTGTAGCTGATGTAGAGCACCATAACAATCAGTTGCAATAACNNAATCAATAGCATTCTCTCTCAAAAAAAAA ]




>consensus_12058#0
AACTTGACGCCGCCCTCGCTCACACGCTCGCCGCCCGCTTCCCCTCCTCATCAAGATAAG
GCGGGAAACCCAGCTGCGGCTGCGGATTCCAGAAGGTTCTGGAAGCTTCTGGGGCACCCC
ACGCACAGCCGCCGGCGCCCGGCCCGGTGCCGGAAGAGGCTGCATGCATGAGTAGTCGCG
CCGCCGCCGTAGAGGAGCAGCATGGGGATGGTCACCGCCACCGCCGCCGCCGCCCTCCTC
GCCTCGCCGCCGCAGGGTCATCTTGGAAGGCGGTGTCACCTCGTGGTGCCCGGGCTACGG
CTGAGGCCTCCGGCCAGCTCATCTCCTCCCCACGCCGCCCCGCCGCTCAGGTTAAGCAAT
TTTGTCCCAAGGTGTTACATCACAAATGTTGAGGTTGATGTTAGTCATACGAGTGAACAA
GAGGCTCTAGATGATCACCCACCATTGTTGCCAGCCTGCGCCATTCCAGTTGTACACCTA
CGAGATGTTCCGGATGCTAGTCCTTTTCCCCTGCATGAGAGTGCTTCCCATTCTACTGAT
TTTGAAGAGCTACCCGTCTTGTCTGAGGGTGAGCTACATACTATAGCGGCCACCCCTGCC
CACCCTGCTGGATTATATGCTCTATACGCTAGCTACTTATTTGGTAACTTGGTGGAACAA
CTTTGGAATTTTGCTTGGCCTGCTGCACTGGCAATTCTCCATCCAAGCCTATTGCCTGTG
GCTATTGTCGGTTTCTTCACAAAGCTTTCAGTCTTTATTGGGGCACCAATAGTAGGGAAA
CTTATGGATCATTTCCCTCGAATACCTATGTACACAGGGTTGAATGCTGTCCAGGTAGCC
ACTCAGTTGATATCAGCTGCAATGGTCATCTATGCTATGAAGAATGTGACCCATGCATCT
ACGTCCGCCGTAGTTCTCAAACCTTGGTTTATCGCACTAGTGGCAGCTGGAGCTATTGAA
AGGCTTGCAGGATTGGCACTAGGAGTTGCTATGGAGCGGGACTGGGTTGTGTTGTTAGCA
GGAACTAACAGGCCAGTTGCATTAGCTCAAGCTAACGCTGTGCTTAATCGACTTGATCTT
GTTTGTGAGACTGTTGGTGCTTCAGTTTTTGGCCTTCTGCTGTCCAAATATCATCCAGTA
ACCTGTTTGAAGATTGCTTGTGGTCTAATGATATGCAGTTTCCCTGTCCTGGTTGTGTTG
GGTCAACTGATTAACAGATTCTCCTGCCATGCTCTTGATTCCTCTAGAACCCCGAGTGAA
GAATCTATCTGTGCCAATCTATTGGATGTTCGTAAGATTGTTCAAAATGGCTTGAGTGCT
ATCAGAAATGGCTGGAATGAGTATAAGCAGCAAACAGTTCTACCTGCAAGTGTAGCTACC
GTGTTTCTAAATTTCAATGTAGCACTTGCTCCTGGTGCTATAATGACTGCGCTATTGATG
CATCGTGGTATTAGTCCGTCGATTGTTGGTGCTTTTAGTGGATTGTGTTCTATCATGGGC
CTTGTTGCGACATTCATCTCCTCAAGCTTGGTGGAAAGAGTTGGAATTCTAAAGGCAGGA
GCAGCTGGATTGATAGTTCAAGCTTCACTCTTGTCGGTCGCTCTCGTAGTGTATTGGACT
GGTTCTATTTCACAGAGGACACCTCTACTTATCTTCCTGGCTGCTATCGCATTATCTCGG
TTGGGGCACATGTCATATGATGTTGTGGGTACACAGATTCTCCAAACAGGTGTTCCTGCA
TCAAAAGCAAATCTTATTGGTGGAATGGAGGTCTCAATATCAAGCCTTGCAGAACTAGTC
ATGCTTGGTATGGCCATCATCGCAAACGACGTTTCTCATTTCGGTTTCTTGGCAATCCTA
TCCGTGTCATCGGTTGCTGGTGCGGCATGGATGTTCTGCCAGTGGTTGGGAAATCCTACA
GATGAGCAGAGGGAACTGTTCATGTTTGATCCCCATTTCCAAGTTGAACCAATATAATGA
ACAAGGCATGTTCTAAAGTAGCTGGGAAAGTTACATCACATGCTGCGTGTGCTTGGCGTC
AGAAGAGGGCTCTGCAATGCCCTGAAGACGCTGTGACATTTTGATTCAATACAATATACA
CTTAGGATACAGTCATTTGTTACTATTAGCCCAAGCCATGCGTAGAATTCAACTTGTACA
CCCTTTTTTTTCACCTCACATGCTGTACAGTTCATCTACCATGGGCTTAGTTGTTTTTTG
TAGGCTTGTAGCTGATGTAGAGCACCATAACAATCAGTTGCAATAACAAAATCAATAGCA
TTCTCTCTAAAAAAAAAAA

consensusID : consensus_12058#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2046
fasta sequence 
                              [CAGAAGGTTCTGGAAGCTTCTGGGGCACCCCACGCACAGCCGCCGGCGCCCGGCCCGGTGCCGGAAGAGGCTGCATGCATGAGTAGTCGCGCCGCCGCCGTAGAGGAGCAGCATGGGGATGGTCACCGCCACCGCCGCCGCCGCCCTCCTCGCCTCGCCGCCGCAGGGTCATCTTGGAAGGCGGTGTCACCTCGTGGTGCCCGGGCTACGGCTGAGGCCGCCGGCCAGCTCATCTCCTCCCCACGCCGCCCCGCCGCTCAGGTTAAGCAATTTTGTCCCAAGGTGTTACATCACAAATGTTGAGGTTGATGTTAGTCATACGAGTGAACAAGAGGCTCTAGATGATCACCCACCATTGTTGCCAGCCTGCGCCATTCCAGTTGTACACCTACGAGATGTTCCGGATGCTAGTCCTTTTCCCCTGCATGAGAGTGCTTCCCATTCTACTGATTTTGAAGAGCTACCCGTCTTGTCTGAGGGTGAGCTACATACTATAGCGGCCACCCCTGCCCACCCTGCTGGATTATATGCTCTATACGCTAGCTACTTATTTGGTAACTTGGTGGAACAACTTTGGAATTTTGCTTGGCCTGCTGCACTGGCAATTCTCCATCCAAGCCTATTGCCTGTGGCTATTGTCGGTTTCTTCACAAAGCTTTCAGTCTTTATTGGGGCACCAATAGTAGGGAAACTTATGGATCATTTCCCTCGAATACCTATGTACACAGGGTTGAATGCTGTCCAGGTAGCCACTCAGTTGATATCAGCTGCAATGGTCATCTATGCTATGAAGAATGTGACCCATGCATCTACGTCCGCCGTAGTTCTCAAACCTTGGTTTATCGCACTAGTGGCAGCTGGAGCTATTGAAAGGCTTGCAGGATTGGCACTAGGAGTTGCTATGGAGCGGGACTGGGTTGTGTTGTTAGCAGGAACTAACAGGCCAGTTGCATTAGCTCAAGCTAACGCTGTGCTTAATCGACTTGATCTTGTTTGTGAGACTGTTGGTGCTTCAGTTTTTGGCCTTCTGCTGTCCAAATATCATCCAGTAACCTGTTTGAAGATTGCTTGTGGTCTAATGATATGCAGTTTCCCTGTCCTGGTTGTGTTGGGTCAACTGATTAACAGATTCTCCTGCCATGCTCTTGATTCCTCTAGAACCCCGAGTGAAGAATCTATCTGTGCCAATCTATTGGATGTTCGTAAGATTGTTCAAAATGGCTTGAGTGCTATCAGAAATGGCTGGAATGAGTATAAGCAGCAAACAGTTCTACCTGCAAGTGTAGCTACCGTGTTTCTAAATTTCAATGTAGCACTTGCTCCTGGTGCTATAATGACTGCGCTATTGATGCATCGTGGTATTAGTCCGTCGATTGTTGGTGCTTTTAGTGGATTGTGTTCTATCATGGGCCTTGTTGCGACATTCATCTCCTCAAGCTTGGTGGAAAGAGTTGGAATTCTAAAGGCAGGAGCAGCTGGATTGATAGTTCAAGCTTCACTCTTGTCGGTCGCTCTCGTAGTGTATTGGACTGGTTCTATTTCACAGAGGACACCTCTACTTATCTTCCTGGCTGCTATCGCATTATCTCGGTTGGGGCACATGTCATATGATGTTGTGGGTACACAGATTCTCCAAACAGGTGTTCCTGCATCAAAAGCAAATCTTATTGGTGGAATGGAGGTCTCAATATCAAGCCTTGCAGAACTAGTCATGCTTGGTATGGCCATCATCGCAAACGACGTTTCTCATTTCGGTTTCTTGGCAATCCTATCCGTGTCATCGGTTGCTGGTGCGGCATGGATGTTCTGCCAGTGGTTGGGAAATCCTACAGATGAGCAGAGGGAACTGTTCATGTTTGATCCCCATTTCCAAGTTGAACCAATGTAAGTAAAAAAAAAAACACCATTCATGCCATCACCTTGTTAAGAAAGATACTAGAGTTCAGAGTATTTGACTTCCATACTGGACGTAGCAAGAACTTTGTGCCACTTCTTTTTCCCAATTTACCATATGATCTTGAATATTGAAATTACAAATATCAAACG]

[+] EMBL AK065844             [CAGAAGGTTCTGGAAGCTTCTGGGGCACCCCACGCACAGCCGCCGGCGCCCGGCCCGGTGCCGGAAGAGGCTGCATGCATGAGTAGTCGCGCCGCCGCCGTAGAGGAGCAGCATGGGGATGGTCACCGCCACCGCCGCCGCCGCCCTCCTCGCCTCGCCGCCGCAGGGTCATCTTGGAAGGCGGTGTCACCTCGTGGTGCCCGGGCTACGGCTGAGGCCGCCGGCCAGCTCATCTCCTCCCCACGCCGCCCCGCCGCTCAGGTTAAGCAATTTTGTCCCAAGGTGTTACATCACAAATGTTGAGGTTGATGTTAGTCATACGAGTGAACAAGAGGCTCTAGATGATCACCCACCATTGTTGCCAGCCTGCGCCATTCCAGTTGTACACCTACGAGATGTTCCGGATGCTAGTCCTTTTCCCCTGCATGAGAGTGCTTCCCATTCTACTGATTTTGAAGAGCTACCCGTCTTGTCTGAGGGTGAGCTACATACTATAGCGGCCACCCCTGCCCACCCTGCTGGATTATATGCTCTATACGCTAGCTACTTATTTGGTAACTTGGTGGAACAACTTTGGAATTTTGCTTGGCCTGCTGCACTGGCAATTCTCCATCCAAGCCTATTGCCTGTGGCTATTGTCGGTTTCTTCACAAAGCTTTCAGTCTTTATTGGGGCACCAATAGTAGGGAAACTTATGGATCATTTCCCTCGAATACCTATGTACACAGGGTTGAATGCTGTCCAGGTAGCCACTCAGTTGATATCAGCTGCAATGGTCATCTATGCTATGAAGAATGTGACCCATGCATCTACGTCCGCCGTAGTTCTCAAACCTTGGTTTATCGCACTAGTGGCAGCTGGAGCTATTGAAAGGCTTGCAGGATTGGCACTAGGAGTTGCTATGGAGCGGGACTGGGTTGTGTTGTTAGCAGGAACTAACAGGCCAGTTGCATTAGCTCAAGCTAACGCTGTGCTTAATCGACTTGATCTTGTTTGTGAGACTGTTGGTGCTTCAGTTTTTGGCCTTCTGCTGTCCAAATATCATCCAGTAACCTGTTTGAAGATTGCTTGTGGTCTAATGATATGCAGTTTCCCTGTCCTGGTTGTGTTGGGTCAACTGATTAACAGATTCTCCTGCCATGCTCTTGATTCCTCTAGAACCCCGAGTGAAGAATCTATCTGTGCCAATCTATTGGATGTTCGTAAGATTGTTCAAAATGGCTTGAGTGCTATCAGAAATGGCTGGAATGAGTATAAGCAGCAAACAGTTCTACCTGCAAGTGTAGCTACCGTGTTTCTAAATTTCAATGTAGCACTTGCTCCTGGTGCTATAATGACTGCGCTATTGATGCATCGTGGTATTAGTCCGTCGATTGTTGGTGCTTTTAGTGGATTGTGTTCTATCATGGGCCTTGTTGCGACATTCATCTCCTCAAGCTTGGTGGAAAGAGTTGGAATTCTAAAGGCAGGAGCAGCTGGATTGATAGTTCAAGCTTCACTCTTGTCGGTCGCTCTCGTAGTGTATTGGACTGGTTCTATTTCACAGAGGACACCTCTACTTATCTTCCTGGCTGCTATCGCATTATCTCGGTTGGGGCACATGTCATATGATGTTGTGGGTACACAGATTCTCCAAACAGGTGTTCCTGCATCAAAAGCAAATCTTATTGGTGGAATGGAGGTCTCAATATCAAGCCTTGCAGAACTAGTCATGCTTGGTATGGCCATCATCGCAAACGACGTTTCTCATTTCGGTTTCTTGGCAATCCTATCCGTGTCATCGGTTGCTGGTGCGGCATGGATGTTCTGCCAGTGGTTGGGAAATCCTACAGATGAGCAGAGGGAACTGTTCATGTTTGATCCCCATTTCCAAGTTGAACCAATGTAAGTAAAAAAAAAAACACCATTCATGCCATCACCTTGTTAAGAAAGATACTAGAGTTCAGAGTATTTGACTTCCATACTGGACGTAGCAAGAACTTTGTGCCACTTCTTTTTCCCAATTTACCATATGATCTTGAATATTGAAATTACAAATATCAAACG]
[+] EMBL OSS12980A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GAGTGCTATCAGAAATGGCTGGAATGAGTATAAGCAGCAAACAGTTCTACCTGCAAGTGTAGCTACCGTGTTTCTAAATTTCAATGTAGCACTTGCTCCTGGTGCTATAATGACTGCGCTATTGATGCATCGTGGTATTAGTCCGTCGATTGTTGGTGCTTTTAGTGGATTGTGTTCTATCATGGGCCTTGTTGCGACATTCATCTCCTCAAGCTTGGTGGAAAGAGTTGGAATTCTAAAGGCAGGAGCAGCTGGATTGATAGTTCAAGCTTCACTCTTGTCGGTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]




>consensus_12058#1
CAGAAGGTTCTGGAAGCTTCTGGGGCACCCCACGCACAGCCGCCGGCGCCCGGCCCGGTG
CCGGAAGAGGCTGCATGCATGAGTAGTCGCGCCGCCGCCGTAGAGGAGCAGCATGGGGAT
GGTCACCGCCACCGCCGCCGCCGCCCTCCTCGCCTCGCCGCCGCAGGGTCATCTTGGAAG
GCGGTGTCACCTCGTGGTGCCCGGGCTACGGCTGAGGCCGCCGGCCAGCTCATCTCCTCC
CCACGCCGCCCCGCCGCTCAGGTTAAGCAATTTTGTCCCAAGGTGTTACATCACAAATGT
TGAGGTTGATGTTAGTCATACGAGTGAACAAGAGGCTCTAGATGATCACCCACCATTGTT
GCCAGCCTGCGCCATTCCAGTTGTACACCTACGAGATGTTCCGGATGCTAGTCCTTTTCC
CCTGCATGAGAGTGCTTCCCATTCTACTGATTTTGAAGAGCTACCCGTCTTGTCTGAGGG
TGAGCTACATACTATAGCGGCCACCCCTGCCCACCCTGCTGGATTATATGCTCTATACGC
TAGCTACTTATTTGGTAACTTGGTGGAACAACTTTGGAATTTTGCTTGGCCTGCTGCACT
GGCAATTCTCCATCCAAGCCTATTGCCTGTGGCTATTGTCGGTTTCTTCACAAAGCTTTC
AGTCTTTATTGGGGCACCAATAGTAGGGAAACTTATGGATCATTTCCCTCGAATACCTAT
GTACACAGGGTTGAATGCTGTCCAGGTAGCCACTCAGTTGATATCAGCTGCAATGGTCAT
CTATGCTATGAAGAATGTGACCCATGCATCTACGTCCGCCGTAGTTCTCAAACCTTGGTT
TATCGCACTAGTGGCAGCTGGAGCTATTGAAAGGCTTGCAGGATTGGCACTAGGAGTTGC
TATGGAGCGGGACTGGGTTGTGTTGTTAGCAGGAACTAACAGGCCAGTTGCATTAGCTCA
AGCTAACGCTGTGCTTAATCGACTTGATCTTGTTTGTGAGACTGTTGGTGCTTCAGTTTT
TGGCCTTCTGCTGTCCAAATATCATCCAGTAACCTGTTTGAAGATTGCTTGTGGTCTAAT
GATATGCAGTTTCCCTGTCCTGGTTGTGTTGGGTCAACTGATTAACAGATTCTCCTGCCA
TGCTCTTGATTCCTCTAGAACCCCGAGTGAAGAATCTATCTGTGCCAATCTATTGGATGT
TCGTAAGATTGTTCAAAATGGCTTGAGTGCTATCAGAAATGGCTGGAATGAGTATAAGCA
GCAAACAGTTCTACCTGCAAGTGTAGCTACCGTGTTTCTAAATTTCAATGTAGCACTTGC
TCCTGGTGCTATAATGACTGCGCTATTGATGCATCGTGGTATTAGTCCGTCGATTGTTGG
TGCTTTTAGTGGATTGTGTTCTATCATGGGCCTTGTTGCGACATTCATCTCCTCAAGCTT
GGTGGAAAGAGTTGGAATTCTAAAGGCAGGAGCAGCTGGATTGATAGTTCAAGCTTCACT
CTTGTCGGTCGCTCTCGTAGTGTATTGGACTGGTTCTATTTCACAGAGGACACCTCTACT
TATCTTCCTGGCTGCTATCGCATTATCTCGGTTGGGGCACATGTCATATGATGTTGTGGG
TACACAGATTCTCCAAACAGGTGTTCCTGCATCAAAAGCAAATCTTATTGGTGGAATGGA
GGTCTCAATATCAAGCCTTGCAGAACTAGTCATGCTTGGTATGGCCATCATCGCAAACGA
CGTTTCTCATTTCGGTTTCTTGGCAATCCTATCCGTGTCATCGGTTGCTGGTGCGGCATG
GATGTTCTGCCAGTGGTTGGGAAATCCTACAGATGAGCAGAGGGAACTGTTCATGTTTGA
TCCCCATTTCCAAGTTGAACCAATGTAAGTAAAAAAAAAAACACCATTCATGCCATCACC
TTGTTAAGAAAGATACTAGAGTTCAGAGTATTTGACTTCCATACTGGACGTAGCAAGAAC
TTTGTGCCACTTCTTTTTCCCAATTTACCATATGATCTTGAATATTGAAATTACAAATAT
CAAACG

consensusID : consensus_12058#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 512
fasta sequence 
                              [ATATGATGTTGTGGGTACACAGATTCTCCCAACAGGTGGTCCTGCATCCAAAGCCAATCTTATTGGTGGAATGGAGGTCTCAATATCAAGCCTTGCAGAACTAGTCATGCTTGTGGTTGGGAAATCCTACAGATGAGCAGAGGGAACTGTTCATGTTTGATCCCCATTTCCAAGTTGAACCAATATAATGAACAAGGCATGTTTCTAAAGTAGCTGGGAAAGTTACATCACATGCTGCGTGTGCTTGGCGTCAGAAGAGGGCTCTGCAATGCCCTGAAGATGCTGTGACATTTTGATTCAATACAATATACACTTAGGATACAGTCATTTGTTACTATTAGCCCACAGCCATGCGTAGAATTCAACTTGTACACCCTTTTTTTTCACCTCACATGCTGTACAGTTCATCTACCACTGGGCTTAGTTGTTTGTTGTAGGCTTGTAGCTGATGTAGAGCACCATAACCATCAGTTGCAATAACCAAATCATAGCATTCTCTCTCAAAAAAAAAA]

[+] EMBL BI797602             [ATATGATGTTGTGGGTACACAGATTCTCCCAACAGGTGGTCCTGCATCCAAAGCCAATCTTATTGGTGGAATGGAGGTCTCAATATCAAGCCTTGCAGAACTAGTCATGCTTGTGGTTGGGAAATCCTACAGATGAGCAGAGGGAACTGTTCATGTTTGATCCCCATTTCCAAGTTGAACCAATATAATGAACAAGGCATGTTTCTAAAGTAGCTGGGAAAGTTACATCACATGCTGCGTGTGCTTGGCGTCAGAAGAGGGCTCTGCAATGCCCTGAAGATGCTGTGACATTTTGATTCAATACAATATACACTTAGGATACAGTCATTTGTTACTATTAGCCCACAGCCATGCGTAGAATTCAACTTGTACACCCTTTTTTTTCACCTCACATGCTGTACAGTTCATCTACCACTGGGCTTAGTTGTTTGTTGTAGGCTTGTAGCTGATGTAGAGCACCATAACCATCAGTTGCAATAACCAAATCATAGCATTCTCTCTCAAAAAAAAAA]




>consensus_12058#2
ATATGATGTTGTGGGTACACAGATTCTCCCAACAGGTGGTCCTGCATCCAAAGCCAATCT
TATTGGTGGAATGGAGGTCTCAATATCAAGCCTTGCAGAACTAGTCATGCTTGTGGTTGG
GAAATCCTACAGATGAGCAGAGGGAACTGTTCATGTTTGATCCCCATTTCCAAGTTGAAC
CAATATAATGAACAAGGCATGTTTCTAAAGTAGCTGGGAAAGTTACATCACATGCTGCGT
GTGCTTGGCGTCAGAAGAGGGCTCTGCAATGCCCTGAAGATGCTGTGACATTTTGATTCA
ATACAATATACACTTAGGATACAGTCATTTGTTACTATTAGCCCACAGCCATGCGTAGAA
TTCAACTTGTACACCCTTTTTTTTCACCTCACATGCTGTACAGTTCATCTACCACTGGGC
TTAGTTGTTTGTTGTAGGCTTGTAGCTGATGTAGAGCACCATAACCATCAGTTGCAATAA
CCAAATCATAGCATTCTCTCTCAAAAAAAAAA

consensusID : consensus_12058#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 432
fasta sequence 
                              [TANNNNNNNCATCGGNNNNNNNNNNNGCATGNATNNNNNGNCAGTGGNNNGGAANNNNNNNNGATGAGCANANNNAANTGTTNNNNNNNGATCCCCATTTCCAAGNNNNACCAATATANTGAACAAGGCATGTNNNAAAGTANNNGGGAAAGTTACATCACATGCTNNNTGTGCTTGNNNTCAGAAGAGGNCTTTGCAATGCCCTGAAGACGNNGTGACATTTTGATTCAATACAATATACACTTAGGATACAGTCATTTGTTACNATTAGCCCAAGCCATNNNTAGAATTCAACTTGTACACCCTTTTTTTTCACCTCACATGNNGTACAGTTCATTTACCATGGGCTTAGTTGTTTTTTGTAGGCTTGTANCTGATGTAGAGCACCATAACAATCAGTTGCAATAACAAAATCAATAGCATNNNNNCAAA]

[-] EMBL CF196712             [TANNNNNNNCATCGGNNNNNNNNNNNGCATGNATNNNNNGNCAGTGGNNNGGAANNNNNNNNGATGAGCANANNNAANTGTTNNNNNNNGATCCCCATTTCCAAGNNNNACCAATATANTGAACAAGGCATGTNNNAAAGTANNNGGGAAAGTTACATCACATGCTNNNTGTGCTTGNNNTCAGAAGAGGNCTTTGCAATGCCCTGAAGACGNNGTGACATTTTGATTCAATACAATATACACTTAGGATACAGTCATTTGTTACNATTAGCCCAAGCCATNNNTAGAATTCAACTTGTACACCCTTTTTTTTCACCTCACATGNNGTACAGTTCATTTACCATGGGCTTAGTTGTTTTTTGTAGGCTTGTANCTGATGTAGAGCACCATAACAATCAGTTGCAATAACAAAATCAATAGCATNNNNNCAAA]




>consensus_12058#3
TANNNNNNNCATCGGNNNNNNNNNNNGCATGNATNNNNNGNCAGTGGNNNGGAANNNNNN
NNGATGAGCANANNNAANTGTTNNNNNNNGATCCCCATTTCCAAGNNNNACCAATATANT
GAACAAGGCATGTNNNAAAGTANNNGGGAAAGTTACATCACATGCTNNNTGTGCTTGNNN
TCAGAAGAGGNCTTTGCAATGCCCTGAAGACGNNGTGACATTTTGATTCAATACAATATA
CACTTAGGATACAGTCATTTGTTACNATTAGCCCAAGCCATNNNTAGAATTCAACTTGTA
CACCCTTTTTTTTCACCTCACATGNNGTACAGTTCATTTACCATGGGCTTAGTTGTTTTT
TGTAGGCTTGTANCTGATGTAGAGCACCATAACAATCAGTTGCAATAACAAAATCAATAG
CATNNNNNCAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      AACTTGACGCCGCCCTCGCTCACACGCTCGCCGCCCGCTTCCCCTCCTCATCAAGATAAG 60
consensus_12058#1      ------------------------------------------------------------
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      GCGGGAAACCCAGCTGCGGCTGCGGATTCCAGAAGGTTCTGGAAGCTTCTGGGGCACCCC 120
consensus_12058#1      ------------------------------------------------------------
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      ACGCACAGCCGCCGGCGCCCGGCCCGGTGCCGGAAGAGGCTGCATGCATGAGTAGTCGCG 180
consensus_12058#1      ------------------------------------------------------------
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      CCGCCGCCGTAGAGGAGCAGCATGGGGATGGTCACCGCCACCGCCGCCGCCGCCCTCCTC 240
consensus_12058#1      ------------------------------------------------------------
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      GCCTCGCCGCCGCAGGGTCATCTTGGAAGGCGGTGTCACCTCGTGGTGCCCGGGCTACGG 300
consensus_12058#1      ------------------------------------------------------------
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      CTGAGGCCTCCGGCCAGCTCATCTCCTCCCCACGCCGCCCCGCCGCTCAGGTTAAGCAAT 360
consensus_12058#1      ------------------------------------------------------------
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      TTTGTCCCAAGGTGTTACATCACAAATGTTGAGGTTGATGTTAGTCATACGAGTGAACAA 420
consensus_12058#1      ------------------------------------------------------------
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      GAGGCTCTAGATGATCACCCACCATTGTTGCCAGCCTGCGCCATTCCAGTTGTACACCTA 480
consensus_12058#1      ------------------------------------------------------------
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      CGAGATGTTCCGGATGCTAGTCCTTTTCCCCTGCATGAGAGTGCTTCCCATTCTACTGAT 540
consensus_12058#1      ------------------------------------------------------------
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      TTTGAAGAGCTACCCGTCTTGTCTGAGGGTGAGCTACATACTATAGCGGCCACCCCTGCC 600
consensus_12058#1      ------------------------------------------------------------
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      CACCCTGCTGGATTATATGCTCTATACGCTAGCTACTTATTTGGTAACTTGGTGGAACAA 660
consensus_12058#1      ------------------------------------------------------------
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      CTTTGGAATTTTGCTTGGCCTGCTGCACTGGCAATTCTCCATCCAAGCCTATTGCCTGTG 720
consensus_12058#1      ------------------------------------------------------------
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      GCTATTGTCGGTTTCTTCACAAAGCTTTCAGTCTTTATTGGGGCACCAATAGTAGGGAAA 780
consensus_12058#1      ------------------------------------------------------------
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      CTTATGGATCATTTCCCTCGAATACCTATGTACACAGGGTTGAATGCTGTCCAGGTAGCC 840
consensus_12058#1      ------------------------------------------------------------
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      ACTCAGTTGATATCAGCTGCAATGGTCATCTATGCTATGAAGAATGTGACCCATGCATCT 900
consensus_12058#1      ------------------------------------------------------------
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      ACGTCCGCCGTAGTTCTCAAACCTTGGTTTATCGCACTAGTGGCAGCTGGAGCTATTGAA 960
consensus_12058#1      ------------------------------------------------------------
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      AGGCTTGCAGGATTGGCACTAGGAGTTGCTATGGAGCGGGACTGGGTTGTGTTGTTAGCA 1020
consensus_12058#1      ------------------------------------------------------------
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      GGAACTAACAGGCCAGTTGCATTAGCTCAAGCTAACGCTGTGCTTAATCGACTTGATCTT 1080
consensus_12058#1      ---------------------CAGAAGGTTCTGGAAGCTTCTGGGGCACCCCACGCACAG 39
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      GTTTGTGAGACTGTTGGTGCTTCAGTTTTTGGCCTTCTGCTGTCCAAATATCATCCAGTA 1140
consensus_12058#1      CCGCCGGCGCCCGGCCCGGTGCCGGAAGAGGCTGCATGCATGAGTAGTCGCGCCGCCGCC 99
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      ACCTGTTTGAAGATTGCTTGTGGTCTAATGATATGCAGTTTCCCTGTCCTGGTTGTGTTG 1200
consensus_12058#1      GTAGAGGAGCAGCATGGGGATGGTCACCGCCACCGCCGCCGCCGCCCTCCTCGCCTCGCC 159
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      GGTCAACTGATTAACAGATTCTCCTGCCATGCTCTTGATTCCTCTAGAACCCCGAGTGAA 1260
consensus_12058#1      GCCGCAGGGTCATCTTGGAAGGCGGTGTCACCTCGTGGTGCCCGGGCTACGGCTGAGGCC 219
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      GAATCTATCTGTGCCAATCTATTGGATGTTCGTAAGATTGTTCAAAATGGCTTGAGTGCT 1320
consensus_12058#1      GCCGGCCAGCTCATCTCCTCCCCACGCCGCCCCGCCGCTCAGGTTAAGCAATTTTGTCCC 279
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      ATCAGAAATGGCTGGAATGAGTATAAGCAGCAAACAGTTCTACCTGCAAGTGTAGCTACC 1380
consensus_12058#1      AAGGTGTTACATCACAAATGTTGAGGTTGATGTTAGTCATACGAGTGAACAAGAGGCTCT 339
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      GTGTTTCTAAATTTCAATGTAGCACTTGCTCCTGGTGCTATAATGACTGCGCTATTGATG 1440
consensus_12058#1      AGATGATCACCCACCATTGTTGCCAGCCTGCGCCATTCCAGTTGTACACCTACGAGATGT 399
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      CATCGTGGTATTAGTCCGTCGATTGTTGGTGCTTTTAGTGGATTGTGTTCTATCATGGGC 1500
consensus_12058#1      TCCGGATGCTAGTCCTTTTCCCCTGCATGAGAGTGCTTCCCATTCTACTGATTTTGAAGA 459
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      CTTGTTGCGACATTCATCTCCTCAAGCTTGGTGGAAAGAGTTGGAATTCTAAAGGCAGGA 1560
consensus_12058#1      GCTACCCGTCTTGTCTGAGGGTGAGCTACATACTATAGCGGCCACCCCTGCCCACCCTGC 519
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      GCAGCTGGATTGATAGTTCAAGCTTCACTCTTGTCGGTCGCTCTCGTAGTGTATTGGACT 1620
consensus_12058#1      TGGATTATATGCTCTATACGCTAGCTACTTATTTGGTAACTTGGTGGAACAACTTTGGAA 579
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      GGTTCTATTTCACAGAGGACACCTCTACTTATCTTCCTGGCTGCTATCGCATTATCTCGG 1680
consensus_12058#1      TTTTGCTTGGCCTGCTGCACTGGCAATTCTCCATCCAAGCCTATTGCCTGTGGCTATTGT 639
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      TTGGGGCACATGTCATATGATGTTGTGGGTACACAGATTCTCCAAACAGGTGTTCCTGCA 1740
consensus_12058#1      CGGTTTCTTCACAAAGCTTTCAGTCTTTATTGGGGCACCAATAGTAGGGAAACTTATGGA 699
                                                                                   

consensus_12058#2      --------------------------------------------------ATATGATGTT 10
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      TCAAAAGCAAATCTTATTGGTGGAATGGAGGTCTCAATATCAAGCCTTGCAGAACTAGTC 1800
consensus_12058#1      TCATTTCCCTCGAATACCTATGTACACAGGGTTGAATGCTGTCCAGGTAGCCACTCAGTT 759
                                                                                   

consensus_12058#2      GTGGGTACACAGATTCTCCCAACAGGTGGTCCTGCATCCAAAGCCAATCTTATTGGTGGA 70
consensus_12058#3      ----------------------------------------------------------TA 2
consensus_12058#0      ATGCTTGGTATGGCCATCATCGCAAACGACGTTTCTCATTTCGGTTTCTTGGCAATCCTA 1860
consensus_12058#1      GATATCAGCTGCAATGGTCATCTATGCTATGAAGAATGTGAC-CCATGCATCTACGTCCG 818
                                                                                   

consensus_12058#2      ATGGAGGTCTCAATATCAAGCCT--TGCAGAACTAGTCATGCTTGTGGTTGGGAAATCCT 128
consensus_12058#3      NNNNNNNCATCGGNNNNNNNNNN--NGCATGNATNNNNN-GNCAGTGGNNNGGAANNNNN 59
consensus_12058#0      TCCGTGTCATCGGTTGCTGGTGC--GGCATGGATGTTCT-GCCAGTGGTTGGGAAATCCT 1917
consensus_12058#1      CCGTAGTTCTCAAACCTTGGTTTATCGCACTAGTGGCAGCTGGAGCTATTGAAAGGCTTG 878
                                **               ***    *          *        *      

consensus_12058#2      ACAGATGAGCAGAGGGAACTGTTCATGTTTGATCCCCATTTCCAAGTTGAACCAATA-TA 187
consensus_12058#3      NNNGATGAGCANANNNAANTGTTNNNNNNNGATCCCCATTTCCAAGNNNNACCAATA-TA 118
consensus_12058#0      ACAGATGAGCAGAGGGAACTGTTCATGTTTGATCCCCATTTCCAAGTTGAACCAATA-TA 1976
consensus_12058#1      CAGGATTGGCACTAGGAGTTGCTATGGAGCGGGACTGGGTTGTGTTGTTAGCAGGAACTA 938
                          ***  ***     *  ** *       *   *    **          *    * **

consensus_12058#2      ATGAACAAG--GCATGTTTCTAAAGTAGC----TGGGAAAGTTACATCACATGCTGCGTG 241
consensus_12058#3      NTGAACAAG--GCATGTNNN-AAAGTANN----NGGGAAAGTTACATCACATGCTNNNTG 171
consensus_12058#0      ATGAACAAG--GCATGTTCT-AAAGTAGC----TGGGAAAGTTACATCACATGCTGCGTG 2029
consensus_12058#1      ACAGGCCAGTTGCATTAGCTCAAGCTAACGCTGTGCTTAATCGACTTGATCTTGTTTGTG 998
                            * **  ****      **  **       *   **   ** * *  *  *   **

consensus_12058#2      TGCTTG-----GCGTCAGAAGAGGGCTCTGCAATGCCCTGAAGATGCTGTGACATTTTGA 296
consensus_12058#3      TGCTTG-----NNNTCAGAAGAGGNCTTTGCAATGCCCTGAAGACGNNGTGACATTTTGA 226
consensus_12058#0      TGCTTG-----GCGTCAGAAGAGGGCTCTGCAATGCCCTGAAGACGCTGTGACATTTTGA 2084
consensus_12058#1      AGACTGTTGGTGCTTCAGTTTTTGGCCTTCTGCTGTCC-AAATATCATCCAGTAACCTGT 1057
                        *  **        ****     * *  *    ** **  ** *         *   ** 

consensus_12058#2      TTCAATACAATATACACT----TAGGATACAGTCATTTGTTACTATTAGCCCACAGCCA- 351
consensus_12058#3      TTCAATACAATATACACT----TAGGATACAGTCATTTGTTACNATTAGCCCA-AGCCA- 280
consensus_12058#0      TTCAATACAATATACACT----TAGGATACAGTCATTTGTTACTATTAGCCCA-AGCCA- 2138
consensus_12058#1      TTGAAGATTGCTTGTGGTCTAATGATATGCAGTTTCCCTGTCCTGGTTGTGTTGGGTCAA 1117
                       ** ** *     *    *    *   ** ****       * *   * *      * ** 

consensus_12058#2      -TGCGTAG-AATTCAACTTGTACACCCTTTTTTTTCACCTCACATGCTGTACAGTTCATC 409
consensus_12058#3      -TNNNTAG-AATTCAACTTGTACACCCTTTTTTTTCACCTCACATGNNGTACAGTTCATT 338
consensus_12058#0      -TGCGTAG-AATTCAACTTGTACACCCTTTTTTTTCACCTCACATGCTGTACAGTTCATC 2196
consensus_12058#1      CTGATTAACAGATTCTCCTGC-CATGCTCTTGATTCCTCTAGAACCCCGAGTGAAGAATC 1176
                        *   **  *  *   * **  **  ** **  ***  **   *    *        ** 

consensus_12058#2      TACCACTG--GGCTTAGTTGTTTGTTGTAGGCTTGTAGCTGATG--TAGAGCACCATAAC 465
consensus_12058#3      TACCA-TG--GGCTTAGTTGTTTTTTGTAGGCTTGTANCTGATG--TAGAGCACCATAAC 393
consensus_12058#0      TACCA-TG--GGCTTAGTTGTTTTTTGTAGGCTTGTAGCTGATG--TAGAGCACCATAAC 2251
consensus_12058#1      TATCTGTGCCAATCTATTGGATGTTCGTAAGATTGTTCAAAATGGCTTGAGTGCTATCAG 1236
                       ** *  **      ** * * *  * *** * ****     ***  * ***  * ** * 

consensus_12058#2      CATCAGTTGCAATAACCA-AATCA-TAG-CATTCTCTCTCAAAAAAAAAA---------- 512
consensus_12058#3      AATCAGTTGCAATAACAA-AATCAATAG-CATNNNNNCAAA------------------- 432
consensus_12058#0      AATCAGTTGCAATAACAA-AATCAATAG-CATTCTCTCTAAAAAAAAAAA---------- 2299
consensus_12058#1      AAATGGCTGGAATGAGTATAAGCAGCAAACAGTTCTACCTGCAAGTGTAGCTACCGTGTT 1296
                        *   * ** *** *  * ** **  *  **      *                      

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      ------------------------------------------------------------
consensus_12058#1      TCTAAATTTCAATGTAGCACTTGCTCCTGGTGCTATAATGACTGCGCTATTGATGCATCG 1356
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      ------------------------------------------------------------
consensus_12058#1      TGGTATTAGTCCGTCGATTGTTGGTGCTTTTAGTGGATTGTGTTCTATCATGGGCCTTGT 1416
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      ------------------------------------------------------------
consensus_12058#1      TGCGACATTCATCTCCTCAAGCTTGGTGGAAAGAGTTGGAATTCTAAAGGCAGGAGCAGC 1476
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      ------------------------------------------------------------
consensus_12058#1      TGGATTGATAGTTCAAGCTTCACTCTTGTCGGTCGCTCTCGTAGTGTATTGGACTGGTTC 1536
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      ------------------------------------------------------------
consensus_12058#1      TATTTCACAGAGGACACCTCTACTTATCTTCCTGGCTGCTATCGCATTATCTCGGTTGGG 1596
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      ------------------------------------------------------------
consensus_12058#1      GCACATGTCATATGATGTTGTGGGTACACAGATTCTCCAAACAGGTGTTCCTGCATCAAA 1656
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      ------------------------------------------------------------
consensus_12058#1      AGCAAATCTTATTGGTGGAATGGAGGTCTCAATATCAAGCCTTGCAGAACTAGTCATGCT 1716
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      ------------------------------------------------------------
consensus_12058#1      TGGTATGGCCATCATCGCAAACGACGTTTCTCATTTCGGTTTCTTGGCAATCCTATCCGT 1776
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      ------------------------------------------------------------
consensus_12058#1      GTCATCGGTTGCTGGTGCGGCATGGATGTTCTGCCAGTGGTTGGGAAATCCTACAGATGA 1836
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      ------------------------------------------------------------
consensus_12058#1      GCAGAGGGAACTGTTCATGTTTGATCCCCATTTCCAAGTTGAACCAATGTAAGTAAAAAA 1896
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      ------------------------------------------------------------
consensus_12058#1      AAAAACACCATTCATGCCATCACCTTGTTAAGAAAGATACTAGAGTTCAGAGTATTTGAC 1956
                                                                                   

consensus_12058#2      ------------------------------------------------------------
consensus_12058#3      ------------------------------------------------------------
consensus_12058#0      ------------------------------------------------------------
consensus_12058#1      TTCCATACTGGACGTAGCAAGAACTTTGTGCCACTTCTTTTTCCCAATTTACCATATGAT 2016
                                                                                   

consensus_12058#2      ------------------------------
consensus_12058#3      ------------------------------
consensus_12058#0      ------------------------------
consensus_12058#1      CTTGAATATTGAAATTACAAATATCAAACG 2046


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)