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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12059#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2370 fasta sequence
[CTCGCCTCGGCCCAGCGCGCGCCGGTTTCGGACTCGTGCTCCAAACGCATATCCCCTCCTTCCCCTCCTCACTCTTCCGCCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTTTTTCCCTTCCTAGGGCTTTGTGTAGCGGAGCAGCAGCGGGGCGGCCTCCTCCGCCCTAGCCCTCGCCCTGGTCCGTCCGGCGTGGCGCGCGCTCTCGCCACCTGGTGTTTTCTTGGGGGCGGTTCGCCGGTTGCCTCCGCCTGGGGACAGCGGCGCGGCGAGGCGAGGCTGAGGGGGTGGCGCCGCCGCGATGAACGTCCCTATAGTCGATCCTTTGCAGGGGGATTTCCCTGAGACGATTGAGGAGTTCTTGCAGTATGGGAGTATGAAATGCATAGCATTCAACCGCAGAGGAACTCTCCTTGCTGCTGGATGTGCAAATGGTACCTGTGTTATCTGGGACTTTGAAACAAGGGGGATTGCAAGAGAACTGCATGATAAAGATTGTACTGCACCTATAACAAGTGTGGCCTGGTCTAAATATGGTCACCATTTGCTCGCCTCTGCTACTGACAAGTCATTGACACTTTGGCATGTGGTAAATGAGAAAAAAATTGCCCGCATTACTCTTCAGCAGACTCCGTTAAGTGTCCGTCTTCATCCTGGTGGTCCATCTACCCCATCTATTTGTTTGGCATGCCCTCTCTCGTCTGCACCTATTCTTGTTGATTTAAACACTGGAAGTACTACAGTTCTCCCAGCTTTTCTGTCTGATAATGGTAACCTCCCTGCTCCTAATACTCGCAATAAATTTTCTGATGGTTCTCCACCTTTTACACCAACTGCTGCAACATTTGACAAGTATGGGGATCTGATATATGTGGGCAATTCCAAGGGAGAGATATTAATTATAGATTCAAAAAGCATCAAGGTACATGCTGTGATTCCCATCCCAGGTGGAACAGTAGTTAAGGATATTGTTTTCAGCAGGGATGGCCGATATCTACTCACAAACTCTAATGATCGGGTGATTAGAGTCTATGATAATCTTCTGCCTGTTAAAGGTTCTGGAGAGGAGATAGAAAAAATAAGCAGTAACAACATTAGCTATGAGAGTCACTACGAGAAGCTAAAAGCAAATGGTGCAAGCTGCCTAGCTATTTCTTGTGAACTTTTGGATGCTATCGCGAAGATACCGTGGAAGGCACCATGCTTTAGTGGTGATAGTGAGTGGATTGTTGGTGCTTCAGCAAGCAAAGGAGAGCACAGATTGTGCATATGGAACCGATCAGGACGTCTTGTAAAAATCCTTGAAGGTCCAAAGGAAGCTCTTATTGATATTGCCTGGCATCCAGTAGATCCTACAATTGTTTCAGTGTCTGTAGCAGGCTTAGCATACATTTGGGCCAAGGAACATGTAGAGAATTGGAGTGCATTTGCTCCTGATTTTGTAGAATTAGAAGAAAACGAAGAGTATGTTGAACGAGAGGATGAGTTTGACTTAAGTGCATATGTAGAAAAGGCTGAAGAACAACTGGTAAACGAGGATGAGTATGTCGATATTGAGACATATGATAAAAACTCAACGTTCAGTGATTTGGATGATAGCAGTAGCACAACGATGGAGCTCATCTACTTGGCAGCTATTCCTATCCCAGACACTCCCGATGAGCAGCCCGACAAATGCCTTGGAAGTTCATCGAAGTTGGAGGACAGCAATCATTCTGATTCCCCATCCTCATTGGATGCTGTACAGAATGGACAAGCGATTCCTCCAGCATCTAGTCCAATGGAAGTGGATAATTCTACTGCTGAAGAACCAGCTGAAGCCGTGAACTCAAAGAGGAGGCGGAGGCTGTCGGCTAAGGGCCTCGAGCTGCAGCAAGCCGAGAAGGGCAAAAAACCAACAACAAAGAATAAGTCCAACGGCAAGTCCCCAGGGTCCAATGGCAAGCAATTGGAGCCTGCTAACGGGAACAGCTCTGCTGTTGATGATGAAGCCACCGAAGACGATGAGATCTGACCTGTCCATCATTGATAACTTTAACTACTTTAGTTCGTGGAGCCCCTGTTGAGAACAGAGGGAATATCTCTGTGTAGTATGCATTAGAAACGATTGAGGAACTATGTGGTGCGCTGAGGCAAAATGAAATCGTTAAATGGAAGTGGGTGGATCTATGTTGAGATTAATCATCTGTGTTGCATTTAATATTTAGGCCTGTTTATTTCTTCACTTTCCTTTCACCCTTTAGATTGTTCTGATCGATAAGGTTTCAGATAACAGTAGATCGTTGTTACAGTGAAGTTTCAAGATCACTGCGCACATGCGTCTTGTGGTTATGTACATGACTTTACAGA-TATTTTATTTTTT]
[+] EMBL AK111713 [CTCGCCTCGGCCCAGCGCGCGCCGGTTTCGGACTCGTGCTCCAAACGCATATCCCCTCCTTCCCCTCCTCACTCTTCCGCCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTTTTTCCCTTCCTAGGGCTTTGTGTAGCGGAGCAGCAGCGGGGCGGCCTCCTCCGCCCTAGCCCTCGCCCTGGTCCGTCCGGCGTGGCGCGCGCTCTCGCCACCTGGTGTTTTCTTGGGGGCGGTTCGCCGGTTGCCTCCGCCTGGGGACAGCGGCGCGGCGAGGCGAGGCTGAGGGGGTGGCGCCGCCGCGATGAACGTCCCTATAGTCGATCCTTTGCAGGGGGATTTCCCTGAGACGATTGAGGAGTTCTTGCAGTATGGGAGTATGAAATGCATAGCATTCAACCGCAGAGGAACTCTCCTTGCTGCTGGATGTGCAAATGGTACCTGTGTTATCTGGGACTTTGAAACAAGGGGGATTGCAAGAGAACTGCATGATAAAGATTGTACTGCACCTATAACAAGTGTGGCCTGGTCTAAATATGGTCACCATTTGCTCGCCTCTGCTACTGACAAGTCATTGACACTTTGGCATGTGGTAAATGAGAAAAAAATTGCCCGCATTACTCTTCAGCAGACTCCGTTAAGTGTCCGTCTTCATCCTGGTGGTCCATCTACCCCATCTATTTGTTTGGCATGCCCTCTCTCGTCTGCACCTATTCTTGTTGATTTAAACACTGGAAGTACTACAGTTCTCCCAGCTTTTCTGTCTGATAATGGTAACCTCCCTGCTCCTAATACTCGCAATAAATTTTCTGATGGTTCTCCACCTTTTACACCAACTGCTGCAACATTTGACAAGTATGGGGATCTGATATATGTGGGCAATTCCAAGGGAGAGATATTAATTATAGATTCAAAAAGCATCAAGGTACATGCTGTGATTCCCATCCCAGGTGGAACAGTAGTTAAGGATATTGTTTTCAGCAGGGATGGCCGATATCTACTCACAAACTCTAATGATCGGGTGATTAGAGTCTATGATAATCTTCTGCCTGTTAAAGGTTCTGGAGAGGAGATAGAAAAAATAAGCAGTAACAACATTAGCTATGAGAGTCACTACGAGAAGCTAAAAGCAAATGGTGCAAGCTGCCTAGCTATTTCTTGTGAACTTTTGGATGCTATCGCGAAGATACCGTGGAAGGCACCATGCTTTAGTGGTGATAGTGAGTGGATTGTTGGTGCTTCAGCAAGCAAAGGAGAGCACAGATTGTGCATATGGAACCGATCAGGACGTCTTGTAAAAATCCTTGAAGGTCCAAAGGAAGCTCTTATTGATATTGCCTGGCATCCAGTAGATCCTACAATTGTTTCAGTGTCTGTAGCAGGCTTAGCATACATTTGGGCCAAGGAACATGTAGAGAATTGGAGTGCATTTGCTCCTGATTTTGTAGAATTAGAAGAAAACGAAGAGTATGTTGAACGAGAGGATGAGTTTGACTTAAGTGCATATGTAGAAAAGGCTGAAGAACAACTGGTAAACGAGGATGAGTATGTCGATATTGAGACATATGATAAAAACTCAACGTTCAGTGATTTGGATGATAGCAGTAGCACAACGATGGAGCTCATCTACTTGGCAGCTATTCCTATCCCAGACACTCCCGATGAGCAGCCCGACAAATGCCTTGGAAGTTCATCGAAGTTGGAGGACAGCAATCATTCTGATTCCCCATCCTCATTGGATGCTGTACAGAATGGACAAGCGATTCCTCCAGCATCTAGTCCAATGGAAGTGGATAATTCTACTGCTGAAGAACCAGCTGAAGCCGTGAACTCAAAGAGGAGGCGGAGGCTGTCGGCTAAGGGCCTCGAGCTGCAGCAAGCCGAGAAGGGCAAAAAACCAACAACAAAGAATAAGTCCAACGGCAAGTCCCCAGGGTCCAATGGCAAGCAATTGGAGCCTGCTAACGGGAACAGCTCTGCTGTTGATGATGAAGCCACCGAAGACGATGAGATCTGACCTGTCCATCATTGATAACTTTAACTACTTTAGTTCGTGGAGCCCCTGTTGAGAACAGAGGGAATATCTCTGTGTAGTATGCATTAGAAACGATTGAGGAACTATGTGGTGCGCTGAGGCAAAATGAAATCGTTAAATGGAAGTGGGTGGATCTA ]
[+] EMBL AU077417 [ AGAGAGAGAGAGAGAGAGAGGTTTTTCCCTTCCTAGGGCTTTGTGTAGCGGA NAGCAGCGGGGCGGCCTCCTCCGCCCTAGCCCTCGCCCTGGTCCGTCCGGCGTGGCGCGCGCTCTCGCCACCTGGTGTTTTCTTGGGGGCGGTTCGCCGGTTGCCTCCGCCTGGGGACAGCGGCGCGGCGAGGCGAGGCTGAGGGGGTGGCGCCGCCGCGATGAACGTCCCTATAGTCGATCCTTTGCAGGGGGATTTCCCTGAGACGATTGAGGAGTTCTTGCAGTATGGGAGTATGAAATGCATAGCATTCAACCGCAGAGGAACTCTCCTTGCTGCTGGATGTGCAAATGGTACCTGTGTTATCTGGGACTTTGAAACAAG ]
[+] EMBL AK111888 [ TTTTCCCTTCCTAGGGCTTTGTGTAGCGGAGCAGCAGCGGGGCGGCCTCCTCCGCCCTAGCCCTCGCCCTGGTCCGTCCGGCGTGGCGCGCGCTCTCGCCACCTGGTGTTTTCTTGGGGGCGGTTCGCCGGTTGCCTCCGCCTGGGGACAGCGGCGCGGCGAGGCGAGGCTGAGGGGGTGGCGCCGCCGCGATGAACGTCCCTATAGTCGATCCTTTGCAGGGGGATTTCCCTGAGACGATTGAGGAGTTCTTGCAGTATGGGAGTATGAAATGCATAGCATTCAACCGCAGAGGAACTCTCCTTGCTGCTGGATGTGCAAATGGTACCTGTGTTATCTGGGACTTTGAAACAAGGGGGATTGCAAGAGAACTGCATGATAAAGATTGTACTGCACCTATAACAAGTGTGGCCTGGTCTAAATATGGTCACCATTTGCTCGCCTCTGCTACTGACAAGTCATTGACACTTTGGCATGTGGTAAATGAGAAAAAAATTGCCCGCATTACTCTTCAGCAGACTCCGTTAAGTGTCCGTCTTCATCCTGGTGGTCCATCTACCCCATCTATTTGTTTGGCATGCCCTCTCTCGTCTGCACCTATTCTTGTTGATTTAAACACTGGAAGTACTACAGTTCTCCCAGCTTTTCTGTCTGATAATGGTAACCTCCCTGCTCCTAATACTCGCAATAAATTTTCTGATGGTTCTCCACCTTTTACACCAACTGCTGCAACATTTGACAAGTATGGGGATCTGATATATGTGGGCAATTCCAAGGGAGAGATATTAATTATAGATTCAAAAAGCATCAAGGTACATGCTGTGATTCCCATCCCAGGTGGAACAGTAGTTAAGGATATTGTTTTCAGCAGGGATGGCCGATATCTACTCACAAACTCTAATGATCGGGTGATTAGAGTCTATGATAATCTTCTGCCTGTTAAAGGTTCTGGAGAGGAGATAGAAAAAATAAGCAGTAACAACATTAGCTATGAGAGTCACTACGAGAAGCTAAAAGCAAATGGTGCAAGCTGCCTAGCTATTTCTTGTGAACTTTTGGATGCTATCGCAAAGATACCGTGGAAGGCACCATGCTTTAGTGGTGATAGTGAGTGGATTGTTGGTGCTTCAGCAAGCAAAGGAGAGCACAGATTGTGCATATGGAACCGATCAGGACGTCTTGTAAAAATCCTTGAAGGTCCAAAGGAAGCTCTTATTGATATTGCCTGGCATCCAGTAGATCCTACAATTGTTTCAGTGTCTGTAGCAGGCTTAGCATACATTTGGGCCAAGGAACATGTAGAGAATTGGAGTGCATTTGCTCCTGATTTTGTAGAATTAGAAGAAAACGAAGAGTATGTTGAACGAGAGGATGAGTTTGACTTAAATGCATATGTAGAAAAGGCTGAAGAACAACTGGTAAACGAGGATGAGTATGTCGATATTGAGACATATGATAAAAACTCAACGTTCAGTGATTTGGATGATAGCAGTAGCACAACGATGGAGCTCATCTACTTGGCAGCTATTCCTATCCCAGACACTCCCGATGAGCAGCCCGACAAATGCCTTGGAAGTTCATCGAAGTTGGAGGACAGCAATCATTCTGATTCCCCATCCTCATTG ]
[+] EMBL C28541 [ CCCTTCCTAGGGCTTTGTGTAGCGGA NAGCAGCGGGGCGGCCTCCTCCGCCCTAGCCCTCGCCCTGGTCCGTCCGGCGTGGCGCGCGCTCTCGCCACCTGGTGTTTTCTNGGGGGCGGTTCGCCGGTTGCCTCCGCCTGGGGACAGCGGCGCGGCGAGGCGAGGCTGAGGGGGTGGCGCCGCCGCNATGAACGTCCCTATAGTCGATCCTTTGCAGGGGGATTTCCCTGAAACGATTGAGGAGTTCTTG ]
[-] EMBL CB635209 [ CCGAGAAGGGCAAAAAACCAACAACAAAGAATAAGTCCAACGGCAAGTCCCCAGGGTCCAATGGCAAGCAATTGGAGCCTGCTAACGGGAACAGCTCTGCTGTTGATGATGAAGCCACCGAAGACGATGAGATCTGACCTGTCCATCATTGATAACTTTAACTACTTTAGTTCGTGGAGCCCCTGTTGAGAACAGAGGGAATATCTCTGTGTAGTATGCATTAGAAACGATTGAGGAACTATGTGGTGCGCTGAGGCAAAATGAAATCGTTAAATGGAAGTGGGTGGATCTATGTTGAGATTAATCATCTGTGTTGCATTTAATATTTAGGCCTGTTTATTTCTTCACTTTCCTTTCACCCTTTAGATTGTTCTGATCGATAAGGTTTCAGATAACAGTAGATCGTTGTTACAGTGAAGTTTCAAGATCACTGCGCACATGCGTCTTGTGGTTATGTACATGACTTTACAGAGTATTT ]
[-] EMBL CB635242 [ CCGAGAAGGGCAAAAAACCAACAACAAAGAATAAGTCCAACGGCAAGTCCCCAGGGTCCAATGGCAAGCAATTGGAGCCTGCTAACGGGAACAGCTCTGCTGTTGATGATGAAGCCACCGAAGACGATGAGATCTGACCTGTCCATCATTGATAACTTTAACTACTTTAGTTCGTGGAGCCCCTGTTGAGAACAGAGGGAATATCTCTGTGTAGTATGCATTAGAAACGATTGAGGAACTATGTGGTGCGCTGAGGCAAAATGAAATCGTTAAATGGAAGTGGGTGGATCTATGTTGAGATTAATCATCTGTGTTGCATTTAATATTTAGGCCTGTTTATTTCTTCACTTTCCTTTCACCCTTTAGATTGTTCTGATCGATAAGGTTTCAGATAACAGTAGATCGTTGTTACAGTGAAGTTTCAAGATCACTGCGCACATGCGTCTTGTGGTTATGTACATGACTTTACAGA TATTT ]
[+] EMBL CB635243 [ GAAGCCCCCGAAGACGATGAGATCTGAGCTGTCCATCATTGATAACTTTAACTACTTTAGTTCGTGGAGCCCCTGTTGAGAACAGAGGGAATATCTCTGTGTAGTATGCATTAGAAACGATTGAGGAACTATGTGGTGCGCTGAGGTAAAATGAAATCGTTAAATGGAAGTGGGTGGATCTATGTTGAGATTAATCATCTGTGTTGCATTTAATATTTAGGTCTGTTTATTTCTTCAATTTCCTTTCACCCTTTAGATTGTTCTGATCGATAAGGTTTCAGATAACAGTAGATTGTTGTTACAGTGAAGTTTCAAGATCATTGAGGACATGCGTGTTGTGGTTATGTACATGACTTTACAGA TATTTTATTTTTT]
consensusID : consensus_12059#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 693 fasta sequence
[GTAGAAAAGGCTGAAGAACAACTGGTAAACGAGGATGAGTATGTCTATATTGAGACATATGATAAAAACTCAACGTTCAGTGATTTGGATGATAGCAGTAGCCCAACGATGGAGCTCATCTACTTGGCAGCTATTCCTATCCCAGACACTCCCGATGAGCAGCCCGACAAATGCCTTGGAAGTTCATCGAAGTTGGAGGACAGCAATCATTTTGATTCCCCATCCTCATTGGATGCTGTACAGAATGGACAAGCGATTCCTCCAGCATCTAGTCCAATGGAAGTGGATAATTCTACTGCTGAAGAACCAGCTGAAGCCGTGAACTCAAAGAGGAGGCGGAGGCTGTCGGCTAAGGGCCTCGAGCTGCAGCAAGCCGAGAAGGGCAAAAAACCAACAACGAAGAATAAGTCCAACGGCAAGTCCCCAGGGTCCAATGGCAAGCAATTGGAGCCTGCTAACGGGAACAGCTTTGCTGTTGATGATGAAGCCCCCGAAGACGATGAGATTTGACCTGTCCATCATTGATAACTTTAACTACTTTAGTTCGTGGAGCCCCTGTTGAGAACAGAGGGAATATCTCTGTGTAGTATGCATTAGAAACGATTGAGGGACTATGTGGTGCGCTGAGGCAAAATGAAATCGTTAAATGGAAGTGGGTGGATCTATGTTGAGATTAAAAAAAAAAAAAAAAAA]
[-] EMBL CA763161 [GTAGAAAAGGCTGAAGAACAACTGGTAAACGAGGATGAGTATGTCTATATTGAGACATATGATAAAAACTCAACGTTCAGTGATTTGGATGATAGCAGTAGCCCAACGATGGAGCTCATCTACTTGGCAGCTATTCCTATCCCAGACACTCCCGATGAGCAGCCCGACAAATGCCTTGGAAGTTCATCGAAGTTGGAGGACAGCAATCATTTTGATTCCCCATCCTCATTGGATGCTGTACAGAATGGACAAGCGATTCCTCCAGCATCTAGTCCAATGGAAGTGGATAATTCTACTGCTGAAGAACCAGCTGAAGCCGTGAACTCAAAGAGGAGGCGGAGGCTGTCGGCTAAGGGCCTCGAGCTGCAGCAAGCCGAGAAGGGCAAAAAACCAACAACGAAGAATAAGTCCAACGGCAAGTCCCCAGGGTCCAATGGCAAGCAATTGGAGCCTGCTAACGGGAACAGCTTTGCTGTTGATGATGAAGCCCCCGAAGACGATGAGATTTGACCTGTCCATCATTGATAACTTTAACTACTTTAGTTCGTGGAGCCCCTGTTGAGAACAGAGGGAATATCTCTGTGTAGTATGCATTAGAAACGATTGAGGGACTATGTGGTGCGCTGAGGCAAAATGAAATCGTTAAATGGAAGTGGGTGGATCTATGTTGAGATTAAAAAAAAAAAAAAAAAA]
[+] EMBL AU077418 [ AGAATGGACAAGCGATTCCTCCAGCATCTAGTCCAATGGAAGTGGATAATTCTACTGCTGAAGAACCAGCTGAAGCCGTGAACTCAAAGAGGAGGCGGAGGCTGTCGGCTAAGGGCCTCGAGCTGCAGCAAGCCGAGAAGGGCAAAAAACCAACAACAAAGAATAAGTCCAACGGCAAGTCCCCAGGGTCCAATGGCAAGCAATTGGAGCCTGCTAACGGGAACAGCTCTGCTGTTGATGATGAAGCCACCGAAGACGATGAGATCTGACCTGTCCATCATTGATAACTTTAACTACTTTAGTTCGTGGAGCCCCTGTTGAGAACAGAGGGAATATCTCTGTGTAGTATGCATTAGAAACGATTGAGGAACTATGTGGTGCGCTGAGGCAAAATGAAATCGTTAAATGGAAGTGGGTGGATCTATGTTGAGATTAAAAAAAAAAAAAAAA ]
consensusID : consensus_12059#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 688 fasta sequence
[GGCTGAAGAACAACTTGGTAAACGAGGATGAGTATGTCGATATTGAGACCATATGATAAAAACTCAACGTTCAGTGATTTGGATGATTNGCAGTAGCACAACGATGGAGCTCATCTACTTGGCAGCTATTCCTTTCCCAGACACTCCCGATGAGCAGCCCGACAAATGCCTTGGAAGTTCATCGAAGTTGGAGGACAGCAATCATTNTGATTCCCCATCCTCATTGGATGCTGTACAGAATGGACAAGCGATTCCTCCAGCATCTAGTCCAATGGAAGTGGATAATTCTACTGCTGAAGAACCAGCTGAAGCCGTGAACTCAAAGAGGAGGCGGAGGCTNTCGGCTAAGGGCCTCGAGCTGCAGCAAGCCGAGAAGGGCAAAAAAAACCAACAACAAAGAATAAGTCCAACGGCAAGTCCCCAGGGTCCAATGGCAAGCAATTGGAGCCTGCTAACGGGAACAGCTCTGCTGTTGATGATGAAGCCNCCGAAGACGATGAGATCTGACCTGTCCATCATTGATAACTTTAACTACTTTAGTTCGTGGAGCCCCTGTTGAGAACAGAGGGAATATCTCTGTGTAGTATGCATTAGAAACGATTGAGGAACTATGTGGTGCGCTGAGGCAAAATGAAATCGTTAAATGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU093016 [GGCTGAAGAACAACTTGGTAAACGAGGATGAGTATGTCGATATTGAGACCATATGATAAAAACTCAACGTTCAGTGATTTGGATGATTNGCAGTAGCACAACGATGGAGCTCATCTACTTGGCAGCTATTCCTTTCCCAGACACTCCCGATGAGCAGCCCGACAAATGCCTTGGAAGTTCATCGAAGTTGGAGGACAGCAATCATTNTGATTCCCCATCCTCATTGGATGCTGTACAGAATGGACAAGCGATTCCTCCAGCATCTAGTCCAATGGAAGTGGATAATTCTACTGCTGAAGAACCAGCTGAAGCCGTGAACTCAAAGAGGAGGCGGAGGCTNTCGGCTAAGGGCCTCGAGCTGCAGCAAGCCGAGAAGGGCAAAAAAAACCAACAACAAAGAATAAGTCCAACGGCAAGTCCCCAGGGTCCAATGGCAAGCAATTGGAGCCTGCTAACGGGAACAGCTCTGCTGTTGATGATGAAGCCNCCGAAGACGATGAGATCTGACCTGTCCATCATTGATAACTTTAACTACTTTAGTTCGTGGAGCCCCTGTTGAGAACAGAGGGAATATCTCTGTGTAGTATGCATTAGAAACGATTGAGGAACTATGTGGTGCGCTGAGGCAAAATGAAATCGTTAAATGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12059#0 CTCGCCTCGGCCCAGCGCGCGCCGGTTTCGGACTCGTGCTCCAAACGCATATCCCCTCCT 60
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 TCCCCTCCTCACTCTTCCGCCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTTT 120
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 TTCCCTTCCTAGGGCTTTGTGTAGCGGAGCAGCAGCGGGGCGGCCTCCTCCGCCCTAGCC 180
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 CTCGCCCTGGTCCGTCCGGCGTGGCGCGCGCTCTCGCCACCTGGTGTTTTCTTGGGGGCG 240
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 GTTCGCCGGTTGCCTCCGCCTGGGGACAGCGGCGCGGCGAGGCGAGGCTGAGGGGGTGGC 300
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 GCCGCCGCGATGAACGTCCCTATAGTCGATCCTTTGCAGGGGGATTTCCCTGAGACGATT 360
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 GAGGAGTTCTTGCAGTATGGGAGTATGAAATGCATAGCATTCAACCGCAGAGGAACTCTC 420
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 CTTGCTGCTGGATGTGCAAATGGTACCTGTGTTATCTGGGACTTTGAAACAAGGGGGATT 480
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 GCAAGAGAACTGCATGATAAAGATTGTACTGCACCTATAACAAGTGTGGCCTGGTCTAAA 540
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 TATGGTCACCATTTGCTCGCCTCTGCTACTGACAAGTCATTGACACTTTGGCATGTGGTA 600
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 AATGAGAAAAAAATTGCCCGCATTACTCTTCAGCAGACTCCGTTAAGTGTCCGTCTTCAT 660
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 CCTGGTGGTCCATCTACCCCATCTATTTGTTTGGCATGCCCTCTCTCGTCTGCACCTATT 720
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 CTTGTTGATTTAAACACTGGAAGTACTACAGTTCTCCCAGCTTTTCTGTCTGATAATGGT 780
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 AACCTCCCTGCTCCTAATACTCGCAATAAATTTTCTGATGGTTCTCCACCTTTTACACCA 840
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 ACTGCTGCAACATTTGACAAGTATGGGGATCTGATATATGTGGGCAATTCCAAGGGAGAG 900
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 ATATTAATTATAGATTCAAAAAGCATCAAGGTACATGCTGTGATTCCCATCCCAGGTGGA 960
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 ACAGTAGTTAAGGATATTGTTTTCAGCAGGGATGGCCGATATCTACTCACAAACTCTAAT 1020
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 GATCGGGTGATTAGAGTCTATGATAATCTTCTGCCTGTTAAAGGTTCTGGAGAGGAGATA 1080
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 GAAAAAATAAGCAGTAACAACATTAGCTATGAGAGTCACTACGAGAAGCTAAAAGCAAAT 1140
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 GGTGCAAGCTGCCTAGCTATTTCTTGTGAACTTTTGGATGCTATCGCGAAGATACCGTGG 1200
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 AAGGCACCATGCTTTAGTGGTGATAGTGAGTGGATTGTTGGTGCTTCAGCAAGCAAAGGA 1260
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 GAGCACAGATTGTGCATATGGAACCGATCAGGACGTCTTGTAAAAATCCTTGAAGGTCCA 1320
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 AAGGAAGCTCTTATTGATATTGCCTGGCATCCAGTAGATCCTACAATTGTTTCAGTGTCT 1380
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 GTAGCAGGCTTAGCATACATTTGGGCCAAGGAACATGTAGAGAATTGGAGTGCATTTGCT 1440
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 CCTGATTTTGTAGAATTAGAAGAAAACGAAGAGTATGTTGAACGAGAGGATGAGTTTGAC 1500
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 TTAAGTGCATATGTAGAAAAGGCTGAAGAACAACT-GGTAAACGAGGATGAGTATGTCGA 1559
consensus_12059#1 ------------GTAGAAAAGGCTGAAGAACAACT-GGTAAACGAGGATGAGTATGTCTA 47
consensus_12059#2 --------------------GGCTGAAGAACAACTTGGTAAACGAGGATGAGTATGTCGA 40
*************** ********************** *
consensus_12059#0 TATTGAGAC-ATATGATAAAAACTCAACGTTCAGTGATTTGGATGAT-AGCAGTAGCACA 1617
consensus_12059#1 TATTGAGAC-ATATGATAAAAACTCAACGTTCAGTGATTTGGATGAT-AGCAGTAGCCCA 105
consensus_12059#2 TATTGAGACCATATGATAAAAACTCAACGTTCAGTGATTTGGATGATTNGCAGTAGCACA 100
********* ************************************* ******** **
consensus_12059#0 ACGATGGAGCTCATCTACTTGGCAGCTATTCCTATCCCAGACACTCCCGATGAGCAGCCC 1677
consensus_12059#1 ACGATGGAGCTCATCTACTTGGCAGCTATTCCTATCCCAGACACTCCCGATGAGCAGCCC 165
consensus_12059#2 ACGATGGAGCTCATCTACTTGGCAGCTATTCCTTTCCCAGACACTCCCGATGAGCAGCCC 160
********************************* **************************
consensus_12059#0 GACAAATGCCTTGGAAGTTCATCGAAGTTGGAGGACAGCAATCATTCTGATTCCCCATCC 1737
consensus_12059#1 GACAAATGCCTTGGAAGTTCATCGAAGTTGGAGGACAGCAATCATTTTGATTCCCCATCC 225
consensus_12059#2 GACAAATGCCTTGGAAGTTCATCGAAGTTGGAGGACAGCAATCATTNTGATTCCCCATCC 220
********************************************** *************
consensus_12059#0 TCATTGGATGCTGTACAGAATGGACAAGCGATTCCTCCAGCATCTAGTCCAATGGAAGTG 1797
consensus_12059#1 TCATTGGATGCTGTACAGAATGGACAAGCGATTCCTCCAGCATCTAGTCCAATGGAAGTG 285
consensus_12059#2 TCATTGGATGCTGTACAGAATGGACAAGCGATTCCTCCAGCATCTAGTCCAATGGAAGTG 280
************************************************************
consensus_12059#0 GATAATTCTACTGCTGAAGAACCAGCTGAAGCCGTGAACTCAAAGAGGAGGCGGAGGCTG 1857
consensus_12059#1 GATAATTCTACTGCTGAAGAACCAGCTGAAGCCGTGAACTCAAAGAGGAGGCGGAGGCTG 345
consensus_12059#2 GATAATTCTACTGCTGAAGAACCAGCTGAAGCCGTGAACTCAAAGAGGAGGCGGAGGCTN 340
***********************************************************
consensus_12059#0 TCGGCTAAGGGCCTCGAGCTGCAGCAAGCCGAGAAGGGCAAAAAA--CCAACAACAAAGA 1915
consensus_12059#1 TCGGCTAAGGGCCTCGAGCTGCAGCAAGCCGAGAAGGGCAAAAAA--CCAACAACGAAGA 403
consensus_12059#2 TCGGCTAAGGGCCTCGAGCTGCAGCAAGCCGAGAAGGGCAAAAAAAACCAACAACAAAGA 400
********************************************* ******** ****
consensus_12059#0 ATAAGTCCAACGGCAAGTCCCCAGGGTCCAATGGCAAGCAATTGGAGCCTGCTAACGGGA 1975
consensus_12059#1 ATAAGTCCAACGGCAAGTCCCCAGGGTCCAATGGCAAGCAATTGGAGCCTGCTAACGGGA 463
consensus_12059#2 ATAAGTCCAACGGCAAGTCCCCAGGGTCCAATGGCAAGCAATTGGAGCCTGCTAACGGGA 460
************************************************************
consensus_12059#0 ACAGCTCTGCTGTTGATGATGAAGCCACCGAAGACGATGAGATCTGACCTGTCCATCATT 2035
consensus_12059#1 ACAGCTTTGCTGTTGATGATGAAGCCCCCGAAGACGATGAGATTTGACCTGTCCATCATT 523
consensus_12059#2 ACAGCTCTGCTGTTGATGATGAAGCCNCCGAAGACGATGAGATCTGACCTGTCCATCATT 520
****** ******************* **************** ****************
consensus_12059#0 GATAACTTTAACTACTTTAGTTCGTGGAGCCCCTGTTGAGAACAGAGGGAATATCTCTGT 2095
consensus_12059#1 GATAACTTTAACTACTTTAGTTCGTGGAGCCCCTGTTGAGAACAGAGGGAATATCTCTGT 583
consensus_12059#2 GATAACTTTAACTACTTTAGTTCGTGGAGCCCCTGTTGAGAACAGAGGGAATATCTCTGT 580
************************************************************
consensus_12059#0 GTAGTATGCATTAGAAACGATTGAGGAACTATGTGGTGCGCTGAGGCAAAATGAAATCGT 2155
consensus_12059#1 GTAGTATGCATTAGAAACGATTGAGGGACTATGTGGTGCGCTGAGGCAAAATGAAATCGT 643
consensus_12059#2 GTAGTATGCATTAGAAACGATTGAGGAACTATGTGGTGCGCTGAGGCAAAATGAAATCGT 640
************************** *********************************
consensus_12059#0 TAAATGGAAGTGGGTGGATCTATGTTGAGATTAATCATCTGTGTTGCATTTAATATTTAG 2215
consensus_12059#1 TAAATGGAAGTGGGTGGATCTATGTTGAGATTAAAAAAAAAAAAAAAAAA---------- 693
consensus_12059#2 TAAATGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------ 688
********* * * * * ** * *
consensus_12059#0 GCCTGTTTATTTCTTCACTTTCCTTTCACCCTTTAGATTGTTCTGATCGATAAGGTTTCA 2275
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 GATAACAGTAGATCGTTGTTACAGTGAAGTTTCAAGATCACTGCGCACATGCGTCTTGTG 2335
consensus_12059#1 ------------------------------------------------------------
consensus_12059#2 ------------------------------------------------------------
consensus_12059#0 GTTATGTACATGACTTTACAGATATTTTATTTTTT 2370
consensus_12059#1 -----------------------------------
consensus_12059#2 -----------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||