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Oryza sativa
cluster # 12062 cluster # 12062       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12062#0 length = 1986 sequences # 7  
consensus_12062#1 length = 566 sequences # 3  

consensusID : consensus_12062#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1986
fasta sequence
                              [CTCTCCCTCCTCCGTTTCCTTCCCCTCGAAGCAGCGAGCAGCGAGCAGCAGCAAAGCCGCGGCATCGGCGGCGATCCCCCAACCGAATCACCCCCACCTCCGGCGATCGCCGGCCTCCGCCGCAGGCATCCATCCATCCATCCATCTCCGCGTCCGGTCCACCCAG-CCCCCCCCTGGCCGATGGGGAGCGACGCGGAGCCGGCCAAGGGGCTGCTGCCCTACCTGCAGCGCGCCGACGAGCTGCAGAAGCACGAGCCGCTCGTCGCCTACTACTGTCGGCTCTACGCGATGGAGAAGGGGATGAGAATTCCGCAGAAGGAGCGCACCAAGACCACAAACTCCCTCCTCATCTCTCTCATGAACCAGCTGGAGAAGGATAAGAAGTCATTGAC-TTTGGGGTCTGATGACCATCTTC-ATGTAGA-GGGGTTTGC-ATTGAATGTCTTTGCTAAAGCAGACAAACAGGATCGTGCTGGACGAGCGGACATAAACACTGCAAAAACCTTCTATGCTGCCAGCATCTTCTTTGAGATCCTCAACCAATTTGGTGAGCTTCAGACTGATGTTGAGCAGAAACAGAAATATGCCATCTGGAAGGCTGCTGAAATAAGAAAAGCTCTCAAAGAAGGACGGAGGCCTGAAGCTGGTCCTCCTGGTGGGGACAAAGATGAAGCACCTGACAGCACCACCACAAATTCCCATCTAACGGATATGGGGCGCAGCCAATCCTTTGGCAGTGGGCAGCATGGGAACGAAGCATCATCTCAGCATGTAGATCAGGATTTTAGCAGGAGGGATAGCTTCTCTGCGGTCCAACCAGGAAATAATGCACTCCGGCACAGTACAGAGAAGTTCAATGACCATGTCTCTGCCCAGTCACCTTATTCACCACCACCCCCACAATCCCAGACGCCCCCACAATCCCAGTTTTCATCTCCTGCACAGTCATCTTATTCCTCTCCGTCATATCAAGGAACAGATTACCCTTCTTCTGATGTTCACAAACCACCCCACGGTTATTCATCCGCCCCATATACAAGCACAGACTACCCTACCAATGAGGTCCACAAACCACCATCCAATTATTCCTCACCACCGTACACAAGAACAGACTACCCTTCCAGTGATAGCTACAATCCCCAGAGCAATGATAAACCAGATATCCCTACTTATCCTCACACATACCACCAGCCACCCTACACAATTGAACCGCAGCACACATCTCAAAACTACTACTCTACAGAAACCCCAGCTGCTCCGTATAACTACTCTAATTTTCAGTCCTATCCAAGCTTTCAGGACAGCTCGGTACCTTCTGTCCCAACTCATCAGTCTTCGTTCTATCCTGCTAGTGATGGTACAAGCGCTGTATCATACTCTCCTTCTGGATCGAACCATCCTGCACCAACACAATACCACCCGAGTGCTGATACTACTACGCATCAAGTTACTCCCCCTGCTATCGCACCACCGGCTAGCCAATACAAGTATGATAGCAGTTACCAGCCAGAAGTTGAAAAGATTGCCGAGGCTCACAAGGCAGCAAGATTTGCAGTTGGTGCCCTCGCATTTGACGACGTGTCGGTCGCTGTTGATCACCTGAAGCGCGCGCTGGATCTTCTGACGAACCCTTCCGCCGAAACTCATTAGTTCTCTCAGGCTTTCTTATGGTCTTCGCAGAAAACATCTTCTGTACATATGCTACACTGGTAATTACTACGACAT-GGAGATGTTGCCTGGTTGCATACAAACAAAGATAGCAAAGATACT-GGGTTGGCTACACAAATCTAGGAGATCTCGAGGGGCACCTTTTCTCCTGTACCTACAACCATTGAACGGCTTCTTGTGTGAAGTTGAATTATTTGTCACAGAGTTTTGCAAGAAAAGGATATACTGTACATTACA-TTTGTTTGAATAAATCTTGAGAGGTGATCTGGTACTTCTTGTATATTGACTGCTTTGGTTTAAGGTCTCATTTGTCATTATTGC]

[+] EMBL AK066935             [CTCTCCCTCCTCCGTTTCCTTCCCCTCGAAGCAGCGAGCAGCGAGCAGCAGCAAAGCCGCGGCATCGGCGGCGATCCCCCAACCGAATCACCCCCACCTCCGGCGATCGCCGGCCTCCGCCGCAGGCATCCATCCATCCATCCATCTCCGCGTCCGGTCCACCCAG CCCCCCCCTGGCCGATGGGGAGCGACGCGGAGCCGGCCAAGGGGCTGCTGCCCTACCTGCAGCGCGCCGACGAGCTGCAGAAGCACGAGCCGCTCGTCGCCTACTACTGTCGGCTCTACGCGATGGAGAAGGGGATGAGAATTCCGCAGAAGGAGCGCACCAAGACCACAAACTCCCTCCTCATCTCTCTCATGAACCAGCTGGAGAAGGATAAGAAGTCATTGAC TTTGGGGTCTGATGACCATCTTC ATGTAGA GGGGTTTGC ATTGAATGTCTTTGCTAAAGCAGACAAACAGGATCGTGCTGGACGAGCGGACATAAACACTGCAAAAACCTTCTATGCTGCCAGCATCTTCTTTGAGATCCTCAACCAATTTGGTGAGCTTCAGACTGATGTTGAGCAGAAACAGAAATATGCCATCTGGAAGGCTGCTGAAATAAGAAAAGCTCTCAAAGAAGGACGGAGGCCTGAAGCTGGTCCTCCTGGTGGGGACAAAGATGAAGCACCTGACAGCACCACCACAAATTCCCATCTAACGGATATGGGGCGCAGCCAATCCTTTGGCAGTGGGCAGCATGGGAACGAAGCATCATCTCAGCATGTAGATCAGGATTTTAGCAGGAGGGATAGCTTCTCTGCGGTCCAACCAGGAAATAATGCACTCCGGCACAGTACAGAGAAGTTCAATGACCATGTCTCTGCCCAGTCACCTTATTCACCACCACCCCCACAATCCCAGACGCCCCCACAATCCCAGTTTTCATCTCCTGCACAGTCATCTTATTCCTCTCCGTCATATCAAGGAACAGATTACCCTTCTTCTGATGTTCACAAACCACCCCACGGTTATTCATCCGCCCCATATACAAGCACAGACTACCCTACCAATGAGGTCCACAAACCACCATCCAATTATTCCTCACCACCGTACACAAGAACAGACTACCCTTCCAGTGATAGCTACAATCCCCAGAGCAATGATAAACCAGATATCCCTACTTATCCTCACACATACCACCAGCCACCCTACACAATTGAACCGCAGCACACATCTCAAAACTACTACTCTACAGAAACCCCAGCTGCTCCGTATAACTACTCTAATTTTCAGTCCTATCCAAGCTTTCAGGACAGCTCGGTACCTTCTGTCCCAACTCATCAGTCTTCGTTCTATCCTGCTAGTGATGGTACAAGCGCTGTATCATACTCTCCTTCTGGATCGAACCATCCTGCACCAACACAATACCACCCGAGTGCTGATACTACTACGCATCAAGTTACTCCCCCTGCTATCGCACCACCGGCTAGCCAATACAAGTATGATAGCAGTTACCAGCCAGAAGTTGAAAAGATTGCCGAGGCTCACAAGGCAGCAAGATTTGCAGTTGGTGCCCTCGCATTTGACGACGTGTCGGTCGCTGTTGATCACCTGAAGCGCGCGCTGGATCTTCTGACGAACCCTTCCGCCGAAACTCATTAGTTCTCTCAGGCTTTCTTATGGTCTTCGCAGAAAACATCTTCTGTACATATGCTACACTGGTAATTACTACGACAT GGAGATGTTGCCTGGTTGCATACAAACAAAGATAGCAAAGATACT GGGTTGGCTACACAAATCTAGGAGATCTCGAGGGGCACCTTTTCTCCTGTACCTACAACCATTGAACGGCTTCTTGTGTGAAGTTGAATTATTTGTCACAGAGTTTTGCAAGAAAAGGATATACTGTACATTACA TTTGTTTGAATAAATCTTGAGAGGTGATCTGGTACTTCTTGTATATTGACTGCTTTGGTTTAAGGTCTCATTTGTCATTATTGC]
[+] EMBL BE040659             [              ggggCTTCCCCTCGAAGCAGCGAGCAGCGAGCAGCAGCAAAGCCGCGGCATCGGCGGCGATCCCCCAACCGAATCACCCCCACCTCCGGCGATCGCCGGCCTCCGCCGCAGGCATCCATCCATCCATCCATCTCCGCGTCCGGTCCACCCAGCCCCCCCCCTGGCCGATGGGGAGCGACGCGGAGCCGGCCAAGGGGCTGCTGCCCTACCTGCAGCGCGCCGACGAGCTGCAGAAGCACGAGCCGCTCGTCGCCTACTACTGTCGGCTCTACGCGATGGAGAAGGGGATGAGAATTCCGCAGAAGGAGCGCACCAAGACCACAAACTCCCTCCTCATCTCTCTCATGAACCAGCTGGAGAAGGATAAGAAGTCGTTGAC TTTGGGGTCTGATGACCATCTTC ATGTAGA GGGGTTTGC ATTGAATGTCTTTGCTAAAGCAGACAAACAGGATCGTGCTGGACGAGCGGACATAAACACTGCAAAAACCTTCTATGCTGCCAGCATCTTCTTTGAGATCCTCAACCAATTTGGTGAGCTTCAGACTGATGTTGAGCAGAAACAGAAATATGCCATCTGGAAGGCTGCTGAAATAAGAAAAGCTCTCAAAGAAGGACGGAGGCCTGAAGCTGGTCCTCCTGGTGGGGACAAAGATGAAGCACCTGGCAGCACCACCACAAATTCCCATCTAACGGATATGGGGCGGAGGNCATCCTTTGGGAGTGGGCAGCATGGGAACGAA CATCATCTCAGCATGTAGATCAGGATTTAGGCA GAGGGA AGCTTTTCTGCGGTC  ACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL C72441               [                      CCCTCGAAGCAGCGAGCAGCGAGCAGCAGCAAAGCCGCGGCATCGGCGGCGATCCCCCAACCGAATCACCCCCACCTCCGGCGATCGNC GCCTCCGCCGCAG  ATCCATCCATCCATCCATCTCCGCGTCCGGTCCACCCAG CCCCCCCCTGGCCGATGGGGAGCGACGCGNAG CGGCCAAGGGGCTGCTGCCCTACCTGCAGCGCGCCGACGAGCTGCAGAAGCACGAGCCGCTCGTCGCCTACTACTGTCGGCTCTACGCGATGGAGAAGGGGATGAGAATTCCGCAGAAGGAGCGCACCAAGACCACAAACTNCCTCCTCATCTCTCTCATGAACCAGCTTGAGAAGGATAAGAAGTCATTGACTTTTNGGGTCTGATGACCATCTTCAATGTAGAGGGGGTTTTCAATTGAATGT TTTTNTAAAGCAGACAAACAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB676651             [                                AGCCACCTGCGAGCAGCAGCAAAGCCGCGGCATCGGCGGCGATCCCCCAACCGAATCACCCCCACCTCCGGCGATCGCCCGCCTCCGCCGCAGGCATCCATCCATCCATCCATCTCCGCGTCCGGTCCACCCAG CCCCCCCCTGGCCGATGGGGAGCGACGCGGAGCCGGCCAAGGGGCTGCTGCCCTACCTGCAGCGCGCCGACGAGCTGCAGAAGCACGAGCCGCTCGTCGCCTACTACTGTCGGCTCTACGCGATGGAGAAGGGGATGAGAATTCCGCAGAAGGAGCGCACCAAGACCACAAACTCCCTCCTCATCTCTCTCATGAACCAGCTGGAGAAGGATAAGAAGTCATTGAC TTTGGGGTCTGATGACCATCTTC ATGTAGA GGGGTTTGC ATTGAATGTCTTTGCTAAAGCAGACAAACAGGATCGTGCTGGACGAGCGGACATAAACACTGCAAAAACCTTCTATGCTGCCAGCATCTTCTTTGAGATCCTCAACCAATTTGGTGAGCTTCAGACTGATGTTGAGCAGAAACAGAAATATGCCATCTGGAAGGCTGCTGAAATAAGAAAAGCTCTCAAAGAAGGACGGAGGCCTGAAGCTGGTCCTCCTGGTGGGGACAAAGATGAAGCACCTGACAGCACCACCACAAATTCCCATCTAACGGATATGGGGCGCAGCCAATCCTTTGGCAGTGGGCAGCATGGGAACGAAGCATCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF325939             [                                                                                                                                                                                                                      CTGCCCTACCTGCAGCGCGCCGACGAGCTGCAGAAGCACGAGCCGCTCGTCGCCTACTACTGTCGGCTCTACGCGATGGAGAAGGGGATGAGAATTCCGCAGAAGGAGCGCACCAAGACCACAAACTCCCTCCTCATCTCTCTCATGAACCAGCTGGAGAAGGATAAGAAGTCATTGAC TTTGGGGTCTGATGACCATCTTC ATGTAGA GGGGTTTGC ATTGAATGTCTTTGCTAAAGCAGACAAACAGGATCGTGCTGGACGAGCGGACATAAACACTGCAAAAACCTTCTATGCTGCCAGCATCTTCTTTGAGATCCTCAACCAATTTGGTGAGCTTCAGACTGATGTTGAGCAGAAACAGAAATATGCCATCTGGAAGGCTGCTGAAATAAGAAAAGCTCTCAAAGAAGGACGGAGGCCTGAAGCTGGTCCTCCTGGTGGGGACAAAGATGAAGCACCTGACAGCACCACCACAAATTCCCATCTAACGGATATGGGGCGCAGCCAATCCTTTGGCAGTGGGCAGCATGGGAACGAAGCATCATCTCAGCATGTAGATCAGGATTTTAGCAGGAGGGATAGCTTCTCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF321719             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACAATCCCCAGAGCAATGATAAACCAGATATCCCTACTTATCCTCACACATACCACCAGCCACCCTACACAATTGAACCGCAGCACACATCTCAAAACTACTACTCTACAGAAACCCCAGCTGCTCCGTATAACTACTCTAATTTTCAGTCCTATCCAAGCTTTCAGGACAGCTCGGTACCTTCTGTCCCAACTCATCAGTCTTCGTTCTATCCTGCTAGTGATGGTACAAGCGCTGTATCATACTCTCCTTCTGGATCGAACCATCCTGCACCAACACAATACCACCCGAGTGCTGATACTACTACGCATCAAGTTACTCCCCCTGCTATCGCACCACCGGCTAGCCAATACAAGTATGATAGCAGTTACCAGCCAGAAGTTGAAAAGATTGCCGAGGCTCACAAGGCAGCAAGATTTGCAGTTGGTGCCCTCGCATTTGACGACGTGTCGGTCGCTGTTGATCACCTGAAGCGCGCGCTGGATCTTCTGACGAACCCTTCCGCCGAAACTCAT                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF336175             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGTCCCAACTCATCAGTCTTCGTTCTATCCTGCTAGTGATGGTACAAGCGCTGTATCATACTCTCCTTCTGGATCGAACCATCCTGCACCAACACAATACCACCCGAGTGCTGATACTACTACGCATCAAGTTACTCCCCCTGCTATCGCACCACCGGCTAGCCAATACAAGTATGATAGCAGTTACCAGCCAGAAGTTGAAAAGATTGCCGAGGCTCACAAGGCAGCAAGATTTGCAGTTGGTGCCCTCGCATTTGACGACGTGTCGGTCGCTGTTGATCACCTGAAGCGCGCGCTGGATCTTCTGACGAACCCTTCCGCCGAAACTCATTAGTTCTCTCAGGCTTTCTTATGGTCTTCGCAGAAAACATCTTCTGTACATATGCTACACTGGTAATTACTACGACATGGGAGATGTTGCCTGGTTGCATACAAACAAAGATAGCAAAGATACTGGGGTTGGCTACACAAATCTAGGAGATCTCGAGGGGCACCTTTTCTCCTGTACCTACAACCATTGAACGGCTTCTTGTGTGAAGTTGAATTATTTGTCACAGAGTTTTGCAAGAAAAGGATATACTGTACATTACATTTTGTTTGA                                                                           ]


>consensus_12062#0 CTCTCCCTCCTCCGTTTCCTTCCCCTCGAAGCAGCGAGCAGCGAGCAGCAGCAAAGCCGC GGCATCGGCGGCGATCCCCCAACCGAATCACCCCCACCTCCGGCGATCGCCGGCCTCCGC CGCAGGCATCCATCCATCCATCCATCTCCGCGTCCGGTCCACCCAGCCCCCCCCTGGCCG ATGGGGAGCGACGCGGAGCCGGCCAAGGGGCTGCTGCCCTACCTGCAGCGCGCCGACGAG CTGCAGAAGCACGAGCCGCTCGTCGCCTACTACTGTCGGCTCTACGCGATGGAGAAGGGG ATGAGAATTCCGCAGAAGGAGCGCACCAAGACCACAAACTCCCTCCTCATCTCTCTCATG AACCAGCTGGAGAAGGATAAGAAGTCATTGACTTTGGGGTCTGATGACCATCTTCATGTA GAGGGGTTTGCATTGAATGTCTTTGCTAAAGCAGACAAACAGGATCGTGCTGGACGAGCG GACATAAACACTGCAAAAACCTTCTATGCTGCCAGCATCTTCTTTGAGATCCTCAACCAA TTTGGTGAGCTTCAGACTGATGTTGAGCAGAAACAGAAATATGCCATCTGGAAGGCTGCT GAAATAAGAAAAGCTCTCAAAGAAGGACGGAGGCCTGAAGCTGGTCCTCCTGGTGGGGAC AAAGATGAAGCACCTGACAGCACCACCACAAATTCCCATCTAACGGATATGGGGCGCAGC CAATCCTTTGGCAGTGGGCAGCATGGGAACGAAGCATCATCTCAGCATGTAGATCAGGAT TTTAGCAGGAGGGATAGCTTCTCTGCGGTCCAACCAGGAAATAATGCACTCCGGCACAGT ACAGAGAAGTTCAATGACCATGTCTCTGCCCAGTCACCTTATTCACCACCACCCCCACAA TCCCAGACGCCCCCACAATCCCAGTTTTCATCTCCTGCACAGTCATCTTATTCCTCTCCG TCATATCAAGGAACAGATTACCCTTCTTCTGATGTTCACAAACCACCCCACGGTTATTCA TCCGCCCCATATACAAGCACAGACTACCCTACCAATGAGGTCCACAAACCACCATCCAAT TATTCCTCACCACCGTACACAAGAACAGACTACCCTTCCAGTGATAGCTACAATCCCCAG AGCAATGATAAACCAGATATCCCTACTTATCCTCACACATACCACCAGCCACCCTACACA ATTGAACCGCAGCACACATCTCAAAACTACTACTCTACAGAAACCCCAGCTGCTCCGTAT AACTACTCTAATTTTCAGTCCTATCCAAGCTTTCAGGACAGCTCGGTACCTTCTGTCCCA ACTCATCAGTCTTCGTTCTATCCTGCTAGTGATGGTACAAGCGCTGTATCATACTCTCCT TCTGGATCGAACCATCCTGCACCAACACAATACCACCCGAGTGCTGATACTACTACGCAT CAAGTTACTCCCCCTGCTATCGCACCACCGGCTAGCCAATACAAGTATGATAGCAGTTAC CAGCCAGAAGTTGAAAAGATTGCCGAGGCTCACAAGGCAGCAAGATTTGCAGTTGGTGCC CTCGCATTTGACGACGTGTCGGTCGCTGTTGATCACCTGAAGCGCGCGCTGGATCTTCTG ACGAACCCTTCCGCCGAAACTCATTAGTTCTCTCAGGCTTTCTTATGGTCTTCGCAGAAA ACATCTTCTGTACATATGCTACACTGGTAATTACTACGACATGGAGATGTTGCCTGGTTG CATACAAACAAAGATAGCAAAGATACTGGGTTGGCTACACAAATCTAGGAGATCTCGAGG GGCACCTTTTCTCCTGTACCTACAACCATTGAACGGCTTCTTGTGTGAAGTTGAATTATT TGTCACAGAGTTTTGCAAGAAAAGGATATACTGTACATTACATTTGTTTGAATAAATCTT GAGAGGTGATCTGGTACTTCTTGTATATTGACTGCTTTGGTTTAAGGTCTCATTTGTCAT TATTGC



consensusID : consensus_12062#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 566
fasta sequence
                              [CCACCCGAGTGCTGATACTACTACGCATCAAGTTACTCCCCCTGCTATCGCACCACCGGCTAGCCAATACAAGTATGATAGCAGTTACCAGCCAGAAGTTGAAAAGATTGCCGAGGCTCACAAGGCAGCAAGATTTGCAGTTGGTGCCCTCGCATTTGACGACGTGTCGGTCGCTGTTGATCACCTGAAGCGCGCGCTGGATCTTCTGACGAACCCTTCCGCCGAAACTCATTAGTTCTCTCAGGCTTTCTTATGGTCTTCGCAGAAAACATCTTCTGTACATATGCTACACTGGTAATTACTACGACATGGAGATGTTGCCTGGTTGCATACAAACAAAGATAGCAAAGATACTGGGTTGGCTACACAAATCTAGGAGATCTCGAGGGGCACCTTTTCTCCTGTACCTACAACCATTGAACGGCTTCTTGTGTGAAGTTGAATTATTTGTCACAGAGTTTTGCAAGAAAAGGATATACTGTACATTACATTTGTTTGAATAAATCTTGAGAGGTGATCTGGTAAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTAAGTAGC]

[-] EMBL CF321718             [CCACCCGAGTGCTGATACTACTACGCATCAAGTTACTCCCCCTGCTATCGCACCACCGGCTAGCCAATACAAGTATGATAGCAGTTACCAGCCAGAAGTTGAAAAGATTGCCGAGGCTCACAAGGCAGCAAGATTTGCAGTTGGTGCCCTCGCATTTGACGACGTGTCGGTCGCTGTTGATCACCTGAAGCGCGCGCTGGATCTTCTGACGAACCCTTCCGCCGAAACTCATTAGTTCTCTCAGGCTTTCTTATGGTCTTCGCAGAAAACATCTTCTGTACATATGCTACACTGGTAATTACTACGACATGGAGATGTTGCCTGGTTGCATACAAACAAAGATAGCAAAGATACTGGGTTGGCTACACAAATCTAGGAGATCTCGAGGGGCACCTTTTCTCCTGTACCTACAACCATTGAACGGCTTCTTGTGTGAAGTTGAATTATTTGTCACAGAGTTTTGCAAGAAAAGGATATACTGTACATTACATTTGTTTGAATAAATCTTGAGAGGTGATCTGGTAAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTAAGTAGC]
[+] EMBL AU172505             [                                                                                                        AGATTGCCGAGGCTCACAAGGCAGCAAGATTTGCAGTTGGTGCCCTCGCATTTGACGACGTGTCGGTCGCTGTTGATCACCTGAAGCGCGCGCTGGATCTTCTGACGAACCCTTCCGCCGAAACTCATTAGTTCTCTCAGGCTTTCTTATGGTCTTCGCAGAAAACATCTTCTGTACATATGCTACACTGGTAATTACTACGACATGGAGATGTTGCCTGGTTGCATACAAACAAAGATAGCAAAGATACTGGGTTGGCTACACAAATCTAGGAGATCTCGAGGGGCACCTTTTCTCCTGTACCTACAACCATTGAACGGCTTCTTGTGTGAAGTTGAATTATTTGTCACAGAGTTTTGCAAGAAAAGGATATACTGTACATTACATTTGTTTGAATAAATCTTGAGAGGTGATCTGGTACTTCTTGTAAAAAAAAAAAA                      ]
[-] EMBL CB676652             [                                                                                                                                                                                                                           gGCGGAAACTCATTAGTTGTCTCAGGCTTTCTTATGGTTTTCGCAGAAAACATCTTCTGTACATATGCTACACTGGTAATTACTACGACATGGAGATGTTGCCTGGTTGCATACAAACAAAGATAGCAAAGATACTGGGTTGGGTACACAAATCTAGGAGATCTGGAGGGGCACCTTTTCTCCTGTACCTACAACCATTGAACGGCTTCTTGTGTGAAGTTGAAGGATTTGTCACAGAGTTTTGCAAGAAAAGGATATACTGTACATTACATTTGT                                                                       ]


>consensus_12062#1 CCACCCGAGTGCTGATACTACTACGCATCAAGTTACTCCCCCTGCTATCGCACCACCGGC TAGCCAATACAAGTATGATAGCAGTTACCAGCCAGAAGTTGAAAAGATTGCCGAGGCTCA CAAGGCAGCAAGATTTGCAGTTGGTGCCCTCGCATTTGACGACGTGTCGGTCGCTGTTGA TCACCTGAAGCGCGCGCTGGATCTTCTGACGAACCCTTCCGCCGAAACTCATTAGTTCTC TCAGGCTTTCTTATGGTCTTCGCAGAAAACATCTTCTGTACATATGCTACACTGGTAATT ACTACGACATGGAGATGTTGCCTGGTTGCATACAAACAAAGATAGCAAAGATACTGGGTT GGCTACACAAATCTAGGAGATCTCGAGGGGCACCTTTTCTCCTGTACCTACAACCATTGA ACGGCTTCTTGTGTGAAGTTGAATTATTTGTCACAGAGTTTTGCAAGAAAAGGATATACT GTACATTACATTTGTTTGAATAAATCTTGAGAGGTGATCTGGTAAAAAAAAAAAAAAAAA AAAACACTGTCATGCCGTTAAGTAGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12062#0      CTCTCCCTCCTCCGTTTCCTTCCCCTCGAAGCAGCGAGCAGCGAGCAGCAGCAAAGCCGC 60
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      GGCATCGGCGGCGATCCCCCAACCGAATCACCCCCACCTCCGGCGATCGCCGGCCTCCGC 120
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      CGCAGGCATCCATCCATCCATCCATCTCCGCGTCCGGTCCACCCAGCCCCCCCCTGGCCG 180
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      ATGGGGAGCGACGCGGAGCCGGCCAAGGGGCTGCTGCCCTACCTGCAGCGCGCCGACGAG 240
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      CTGCAGAAGCACGAGCCGCTCGTCGCCTACTACTGTCGGCTCTACGCGATGGAGAAGGGG 300
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      ATGAGAATTCCGCAGAAGGAGCGCACCAAGACCACAAACTCCCTCCTCATCTCTCTCATG 360
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      AACCAGCTGGAGAAGGATAAGAAGTCATTGACTTTGGGGTCTGATGACCATCTTCATGTA 420
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      GAGGGGTTTGCATTGAATGTCTTTGCTAAAGCAGACAAACAGGATCGTGCTGGACGAGCG 480
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      GACATAAACACTGCAAAAACCTTCTATGCTGCCAGCATCTTCTTTGAGATCCTCAACCAA 540
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      TTTGGTGAGCTTCAGACTGATGTTGAGCAGAAACAGAAATATGCCATCTGGAAGGCTGCT 600
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      GAAATAAGAAAAGCTCTCAAAGAAGGACGGAGGCCTGAAGCTGGTCCTCCTGGTGGGGAC 660
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      AAAGATGAAGCACCTGACAGCACCACCACAAATTCCCATCTAACGGATATGGGGCGCAGC 720
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      CAATCCTTTGGCAGTGGGCAGCATGGGAACGAAGCATCATCTCAGCATGTAGATCAGGAT 780
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      TTTAGCAGGAGGGATAGCTTCTCTGCGGTCCAACCAGGAAATAATGCACTCCGGCACAGT 840
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      ACAGAGAAGTTCAATGACCATGTCTCTGCCCAGTCACCTTATTCACCACCACCCCCACAA 900
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      TCCCAGACGCCCCCACAATCCCAGTTTTCATCTCCTGCACAGTCATCTTATTCCTCTCCG 960
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      TCATATCAAGGAACAGATTACCCTTCTTCTGATGTTCACAAACCACCCCACGGTTATTCA 1020
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      TCCGCCCCATATACAAGCACAGACTACCCTACCAATGAGGTCCACAAACCACCATCCAAT 1080
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      TATTCCTCACCACCGTACACAAGAACAGACTACCCTTCCAGTGATAGCTACAATCCCCAG 1140
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      AGCAATGATAAACCAGATATCCCTACTTATCCTCACACATACCACCAGCCACCCTACACA 1200
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      ATTGAACCGCAGCACACATCTCAAAACTACTACTCTACAGAAACCCCAGCTGCTCCGTAT 1260
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      AACTACTCTAATTTTCAGTCCTATCCAAGCTTTCAGGACAGCTCGGTACCTTCTGTCCCA 1320
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      ACTCATCAGTCTTCGTTCTATCCTGCTAGTGATGGTACAAGCGCTGTATCATACTCTCCT 1380
consensus_12062#1      ------------------------------------------------------------
                                                                                   

consensus_12062#0      TCTGGATCGAACCATCCTGCACCAACACAATACCACCCGAGTGCTGATACTACTACGCAT 1440
consensus_12062#1      --------------------------------CCACCCGAGTGCTGATACTACTACGCAT 28
                                                       ****************************

consensus_12062#0      CAAGTTACTCCCCCTGCTATCGCACCACCGGCTAGCCAATACAAGTATGATAGCAGTTAC 1500
consensus_12062#1      CAAGTTACTCCCCCTGCTATCGCACCACCGGCTAGCCAATACAAGTATGATAGCAGTTAC 88
                       ************************************************************

consensus_12062#0      CAGCCAGAAGTTGAAAAGATTGCCGAGGCTCACAAGGCAGCAAGATTTGCAGTTGGTGCC 1560
consensus_12062#1      CAGCCAGAAGTTGAAAAGATTGCCGAGGCTCACAAGGCAGCAAGATTTGCAGTTGGTGCC 148
                       ************************************************************

consensus_12062#0      CTCGCATTTGACGACGTGTCGGTCGCTGTTGATCACCTGAAGCGCGCGCTGGATCTTCTG 1620
consensus_12062#1      CTCGCATTTGACGACGTGTCGGTCGCTGTTGATCACCTGAAGCGCGCGCTGGATCTTCTG 208
                       ************************************************************

consensus_12062#0      ACGAACCCTTCCGCCGAAACTCATTAGTTCTCTCAGGCTTTCTTATGGTCTTCGCAGAAA 1680
consensus_12062#1      ACGAACCCTTCCGCCGAAACTCATTAGTTCTCTCAGGCTTTCTTATGGTCTTCGCAGAAA 268
                       ************************************************************

consensus_12062#0      ACATCTTCTGTACATATGCTACACTGGTAATTACTACGACATGGAGATGTTGCCTGGTTG 1740
consensus_12062#1      ACATCTTCTGTACATATGCTACACTGGTAATTACTACGACATGGAGATGTTGCCTGGTTG 328
                       ************************************************************

consensus_12062#0      CATACAAACAAAGATAGCAAAGATACTGGGTTGGCTACACAAATCTAGGAGATCTCGAGG 1800
consensus_12062#1      CATACAAACAAAGATAGCAAAGATACTGGGTTGGCTACACAAATCTAGGAGATCTCGAGG 388
                       ************************************************************

consensus_12062#0      GGCACCTTTTCTCCTGTACCTACAACCATTGAACGGCTTCTTGTGTGAAGTTGAATTATT 1860
consensus_12062#1      GGCACCTTTTCTCCTGTACCTACAACCATTGAACGGCTTCTTGTGTGAAGTTGAATTATT 448
                       ************************************************************

consensus_12062#0      TGTCACAGAGTTTTGCAAGAAAAGGATATACTGTACATTACATTTGTTTGAATAAATCTT 1920
consensus_12062#1      TGTCACAGAGTTTTGCAAGAAAAGGATATACTGTACATTACATTTGTTTGAATAAATCTT 508
                       ************************************************************

consensus_12062#0      GAGAGGTGATCTGGTACTTCTTGTATATTGACTGCTTTGGTTTAAGGTCTCATTTGTCAT 1980
consensus_12062#1      GAGAGGTGATCTGGTAAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTAAGTAGC-- 566
                       ****************        * *   *          * * *   * *  *  *  

consensus_12062#0      TATTGC 1986
consensus_12062#1      ------
                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)