These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12067#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1086 fasta sequence [CCTTTCTTCCGATCCAAGCTACTCTCTCTCTCCTCTCCTCCCCTCCCCTCACCAAGCGAGCCTTCTAGAGAGAGAGAGCTTCCCCCGGGGGGATCGAGCTCGCCGGAGGACTCCACCCGCCGCGCCTCGGCTGCCGGGAGATCCCCCCGCCCGCCCGCCGGTCCGTCCAACGGAATTGAAAGGAGGTAGCCTTCTTGTCAGCTAGTATGTATTTCGAAGGCTATGGCTACCGTGGAAGTACCTTCGAGCAGACATATCGCTGCTACCCTGCGTCTTTCATTGACAAGCCTCAGCTTGAAACTGGTGACAAAATTATTATGCCACCTTCTGCTCTGGATCGTCT-AGCATCTCTGCATATTGAATATCCT-AT-GCTATTTGAAGTCCACAACGCGGCAGCAGAACGGACTTCACACTGTGGTGTCCTGGAGTTCATTGCAGAAGAAGGCATGATCTACATGCCATATTGGATGATGCAAAATCTTCTTCTAACAGAGGGGGATATGGTGTTCATAAAAAATGCCAATCTCCCTAAAGGAACATATGTGAAGCTGCAGCCTCACACAACAGACTTCTTAGACATTTCAAACCCAAAAGCAATCTTGGAGAAAACATTGCGGAATTACTCTTGTCTAACCACTGGTGACAGCATTATGGTAGCATATAATAACAAGAAATACTACATTGATATAGTGGAAACAAAGCCTTCCAATGCTATCAGTATTATTGAGACCGACTGTGAAGTCGACTTTGCTCCACCACTTGACTATAAAGAACCTGAGCGACAAAAAGCTGCTGTTCCTCCAAGTACAGCGCCTACTGCTGAAGAGGCAGCTGAAGAAGAACCAAAGTTCATCCCCTTTACTGGACCTGGGAGGCGTCTGGAT-GGGAAGGCTCCTAAAGATAAGGATGTATCAGCTTCATCCCCTGCAAAACGGCAAGCTAATGCAACAAACAGCGTGCAGCCCTCAACAGCGTCCACATCACAGAGCAGTTCATCTCGTAAAACCACGGAAAAGCTTGTTTTTGGCCCTGGTGGGAACCGCACATCTAAGGAAACAGAAAAGGTGCCTGAAAAGGAACCGAAGG] [+] EMBL CB659750 [CCTTTCTTCCGATCCAAGCTACTCTCTCTCTCCTCTCCTCCCCTCCCCTCACCAAGCGAGCCTTCTAGAGAGAGAGAGCTTCCCCCGGGGGGATCGAGCTCGCCGGAGGACTCCACCCGCCGCGCCTCGGGTGCCGGGAGATCCCCCCGCCCGCCCGCCGGTCCGTCCGACGGAATTGAAAGGAGGTAGCCTTCTTGTCAGCTAGTATGGATTTCGAAGGCTATGGCTACCGTGGAAGTACCTTCGAGCAGACATATCGCTGCTACCCTGCGTCTTTCATTGACAAGCCTCAGCTTGAAACTGGCGACAAAATTATTATGCCACCTTCTGCTCTGGATCGGCT AGCATCTCTGCATATTGAATATCCT AT GCTATTTGAAGTCCACAACGCGGCAGCAGAACGGACTTCACACTGTGGTGTCCTGGAGTTCATTGCAGAAGAAGGCATGATCTACATGCCATATTGGATGATGCAAAATCTTCTTCTAACAGAGGGGGATATGGTGTTCATAAAAAATGCCAATCTCCCTAAAGGAACATATGTGAAGCTGCAGCCTCACACAACAGACTTCTTAGACATTTCATACCCAAAAGCAATCTTGGAGAAAACATTGCGGgaa ] [+] EMBL AK121784 [ TTTCTTCCGATCCAAGCTACTCTCTCTCTCCTCTCCTCCCCTCCCCTCACCAAGCGAGCCTTCTAGAGAGAGAGAGCTTCCCCCGGGGGGATCGAGCTCGCCGGAGGACTCCACCCGCCGCGCCTCGGCTGCCGGGAGATCCCCCCGCCCGCCCGCCGGTCCGTCCAACGGAATTGAAAGGAGGTAGCCTTCTTGTCAGCTAGTATGTATTTCGAAGGCTATGGCTACCGTGGAAGTACCTTCGAGCAGACATATCGCTGCTACACTGCGTCTTTCATTGACAAGCCTCAGCTTGAAACTGGTGACAAAATTATTATGCCACCTTCTGCTCTGGATCGTCT AGCATCTCTGCATATTGAATATCCT AT GCTATTTGAAGTCCACAACGCGGCAGCAGAACGGACTTCACACTGTGGTGTCCTGGAGTTCATTGCAGAAGAAGGCATGATCTACATGCCATATTGGATGATGCAAAATCTTCTTCTAACAGAGGGGGATATGGTGTTCATAAAAAATGCCAATCTCCCTAAAGGAACATATGTGAAGCTGCAGCCTCACACAACAGACTTCTTAGACATTTCAAACCCAAAAGCAATCTTGGAGAAAACATTGCGGAATTACTCTTGTCTAACCACTGGTGACAGCATTATGGTAGCATATAATAACAAGAAATACTACATTGATATAGTGGAAACAAAGCCTTCCAATGCTATCAGTATTATTGAGACCGACTGTGAAGTCGACTTTGCTCCACCACTTGACTATAAAGAACCTGAGCGACAAAAAGCTGCTGCTCCTCCAAGTACAGCGCCTACTGCTGAAGAGGCAGCTGAAGAAGAACCAAAGTTCATCCCCTTTACTGGACCTGGGAGGCGTCTGGAT GGGAAGGCTCCTAAAGATAAGGATGTATCAGCTTCATCCCCTGCAAAACGGCAAGCTAATGCAACAAACAGCGTGCAGCCCTCAACAGCGTCCACATCACAGAGCAGTTCATCTCGTAAAACCACGGAAAAGCTTGTTTTTGGCCCTGGTGGGAACCGCACATCTAAGGAAACAGAAAAGGTGCCTGAAAAGGAACCGAAG ] [+] EMBL AU032268 [ TCCAAGCTACTCTCTCTCTCCTCTCCTCCCCTCCCCTCACCAAGCGAGCCTTCTAGAGAGAGAGAGCTTCCCCCGGGGGGATCGAGCTCGCCGGAGGACTCCACCCGCCGCGCCTCGGCTGCCGGGAGATCCCCCCGCCCGCNCGCNGGTCCGTCCAACGGAATTGAAAGGAGGTAGCCTTCTTGTCAGCTAGTATGTATTTCGAAGGCTATGGCTACCGTGGAAGTACCTTCGAGCAGACATATCGNAGCTACCCTGCGTCTTTCATTGACAAGCCTCAGCTTGAAACTGGTGACAAAATTATTATGCNACCTTCTGCTCTGGATCGTCTAAGCATCTCTGCATATTGAATATCCTAATGGCAATTTGAAGTCCACAACGCGGCAncg ] [+] EMBL C74448 [ AGCTACTCTCTCTCTCCTCTCCTCCCCTCCCCTCACCAAGCGAGCNTTCTAGAGAGAGAGAGCTTCCCCCGGGGGGATCGAGCTCGCCGGAGGACTCCACCCGCCGCGCCTCGGCTGCCGGGAGATCCCCCCGCCCGCNCGCCGGTCCGTCCAACGGAATTGAAAGGAGGTAGCCTTCTTGTCAGCTAGTATGTATTTCGAAGGCTATGGCTACCGTGGAAGTACCTTCGAGCAGACATATCGTNGCTACCCTGCGTCTTTCATTGACAAGCCTNAGCTTGAAACTGGTGACAAAATTATTATGCCACCTTCTGCTCTGGATCGTCT AGCATCTCTGCATAATGGATATCCA AT GCAATTTGAAGT CANAA GCGGCA CCGAA ] [+] EMBL C26839 [ CTCTCTCCTCTCCTCCCCTCCCCTCACCAAGCGAGCCTTCTAGAGAGAGAGAGCTTCCCCCGGGGGGATCGAGCTCGCCGGAGGACTCCACCCGCCGCGCCTCGGCTGCCGGGAGATCCCCCCGCCCGCCCGCCGGTCCGTCCAACGGAATTGAAAGGGGGTAGCCTTCTTGTCAGCTAGTATGTATTTCGAAGGCTATGGCTACCGTGGAAGTACCTTCGAGCAGACATATCGCTGCTACCCTGCGTCTTTCATTGACAAGCCTCAGCTTGAAACTGGTGACAAAATTATTATGCCACCTTCTGCTCTGGATCGTCT AGCATNTCTGCATATTGNATATCCT AT GCTATTTG ] [+] EMBL CF322545 [ CATATTGAATATCCT AT GCTATTTGAAGTCCACAACGCGGCAGCAGAACGGACTTCACACTGTGGTGTCCTGGAGTTCATTGCAGAAGAAGGCATGATCTACATGCCATATTGGATGATGCAAAATCTTCTTCTAACAGAGGGGGATATGGTGTTCATAAAAAATGCCAATCTCCCTAAAGGAACATATGTGAAGCTGCAGCCTCACACAACAGACTTCTTAGACATTTCAAACCCAAAAGCAATCTTGGAGAAAACATTGCGGAATTACTCTTGTCTAACCACTGGTGACAGCATTATGGTAGCATATAATAACAAGAAATACTACATTGATATAGTGGAAACAAAGCCTTCCAATGCTATCAGTATTATTGAGACCGACTGTGAAGTCGACTTTGCTCCACCACTTGACTATAAAGAACCTGAGCGACAAAAAGCTGCTGTTCCTCCAAGTACAGCGCCTACTGCTGAAGAGGCAGCTGAAGAAGAACCAAAGTTCATCCCCTTTACTGGACCTGGGAGGCGTCTGGATGGGGAAGGCTCCTAAAGATAAGGATGTATCAGCTTCATCCCCTGCAAAACGGCAAGCTAATGCAACAAACAGCGTGCAGCCCTCAAC ] [+] EMBL CB646794 [ AAAACATTGCGGAATTACTCTTGTCTAACCACTGGTGACAGCATTATGGTAGCATATAATAACAAGAAATACTACATTGATATAGTGGAAACAAAGCCTTCCAATGCTATCAGTATTATTGAGACCGACTGTGAAGTCGACTTTGCTCCACCACTTGACTATAAAGAACCTGAGCGACAAAAAGCTGCTGTTCCTCCAAGTACAGCGCCTACTGCTGAAGAGGCAGCTGAAGAAGAACCAAAGTTCATCCCCTTTACTGGACCTGGGAGGCGTCTGGAT GGGAAGGCTCCTAAAGATAAGGATGTATCAGCTTCATCCCCTGCAAAACGGCAAGCTAATGCAACAAACAGCGTGCAGCCCTCAACAGCGTCCACATCACAGAGCAGTTCATCTCGTAAAACCACGGAAAAGCTTGTTTTTGGCCCTGGTGGGAACCGCACATCTAAGGAAACAGAAAAGGTGCCTGAAAAGGAACCGAAG ] [+] EMBL CB096911 [ GTGACAGCATTATGGTAGCATATAATAACAAGAAATACTACATTGATATAGTGGAAACAAAGCCTTCCAATGCTATCAGTATTATTGAGACCGACTGTGAAGTCGACTTTGCTCCACCACTTGACTATAAAGAACCTGAGCGACAAAAAGCTGCCGTTCCTCCAAGTACAGCGCCTACTGCTGAAGAGGCAGCTGAAGAAGAACCAAAGTTCATCCCCTTTACTGGACCTGGGAGGCGTCTGGAT GGGAAGGCTCCTAAAGATAAGGATGTATCAGCTTCATCCCCTGCAAAACGGCAAGCTAATGCAACAAACAGCGTGCAGCCCTCAACAGCCTCCACATCACAGAGCAGTTCATCTCGTAAAACCACGGGAAAGCTTGTTTTTGGCCCTGGTGGGAACCGCACATCTAAGGAAACAGAAAAGGTGCCTGAAAAGGAACCGAAG ] [-] EMBL CB646795 [ TAGCATATAATAACAAGAAATACTACATTGATATAGTGGAAACAAAGCCTTCCAATGCTATCAGTATTATTGAGACCGACTGTGAAGTCGACTTTGCTCCACCACTTGACTATAAAGAACCTGAGCGACAAAAAGCTGCTGTTCCTCCAAGTACAGCGCCTACTGCTGAAGAGGCAGCTGAAGAAGAACCAAAGTTCATCCCCTTTACTGGACCTGGGAGGCGTCTGGAT GGGAAGGCTCCTAAAGATAAGGATGTATCAGCTTCATCCCCTGCAAAACGGCAAGCTAATGCAACAAACAGCGTGCAGCCCTCAACAGCGTCCACATCACAGAGCAGTTCATCTCGTAAAACCACGGAAAAGCTTGTTTTTGGCCCTGGTGGGAACCGCACATCTAAGGAAACAGAAAAGGTGCCTGAAAAGGAACCGAAGG] [-] EMBL CB659751 [ TTGAGACCGCCTGGGAAGTCGACTTTGCTCCACCACTTGACTATAAAGAACCTGAGCGACAAAAAGCTGCTGTTCCTCCAAGTACAGCGCCTACTGCTGAAGAGGCAGCTGAAGAAGAACCAAAGTTCATCCCCTTTACTGGACCTGGGAGGCGTCTGGAT GGGAAGGCTCCTAAAGATAAGGATGTATCAGCTTCATCCCCTGCAAAACGGCAAGCTAATGCAACAAACAGCGTGCAGCCCTCAACAGCGTCCACATCACAGAGCAGTTCATCTCGTAAAACCACGGAAAAGCTTGTTTTTGGCCCTGGTGGGAACCGCACATCTAAGGAAACAGAAAAGGTGCCTGAAAAGGAACCGAAGG] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||