These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12078#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2683 fasta sequence [CCGTCCCCAAAAGCAAAGAGGCCTCTCTCTCTCTCTCTCGCCGATCCCTCTCCTCCTCCTCTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAGCTAGCTTGTAGCAGCTAAGGTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGGGCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACAAGATCAACAGGCAGGTGACGTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGAGGTCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCACTGACTCCAGGATGGACAAAATCCTTGAACGTTATGAGCGCTATTCATATGCTGAAAAGGCTCTTATTTCAGCTGAATCCGAGAGTGAGGTAAAACACAGTAGGTTGTATGATATATAACTTTTACATGAAGGGAATATTATTGTTCCTTTTCTATTGCATTAGCATTTCAATCATATCATTTCCTTGTGGCCTTTTAAATCACATGTTAACAAAGCAGTTTTTCTGAATTCTATCGTTCTACTTGCCAAAACTAGATGTTGGTAACCTTCTGTTTTATACTTTTTAACTTCAAACCTCGTGTCTTTTGCACTCTGGCATATTTCTTAAAATTTCTACTTATTGGGATATCATGCAGGAGAGTCCTCATTCCCTTCATTTAATCCCCTCAAATTTTATTTATTATGGTCATACAATTAATGGGCCACATGCATGGAAGTCGATCGCCAGCTTGCGATCAGCATCCTATCATTAATGTTATGATCTATACTAATTCTTCTGTAAATAAATTAAAATTGCACTAGTTTTTAACTAAATGCTACTATTCTATTTTTTTATCCATACTCCGTTTGAGTGGTTTCTTTTGTGTTTCATGAAGCCATATAATATGCTTAAGAAAACATAGAAACATGCACAATACAATAATAGCGCTGGTAGGATCCGGTTGGAGACCAAATGTTTCGATATTCTAAGTGCATATTTATATATACTAAGTAAAACTGTAATCATAAACATGCATATGGACTGTGATCGATGAAATGTTTCTTCATTTTTTTTTTCAAGATAACTCTTCCCCAGTTGACAACATGCACTGCATCCAGAAGTACTCATGGTATTTGTTTTCAGTACTGTTTGATGAGTAAAACTTTGGTAAGTGTTAAAAAATGATGATAAGTGCAAATATTTGTTCCTTTACCACTTCCACCTTCTTGGAGTAAAGAAAAAAATGTGTGTGGTTTGGCAAAGTTGTTGCATATATCACGGCATTAGTGTGCGGATAATGCGAATAAATGCATCAATAAGCACTAGGAGTAAGTTAATTAGTTCTCTACCTTAATTGAAAAGTTCATGTACATTTAAAAAAATTAAACATGCCTCTTTTTATCATTTGTTGAATTTCTACATTTATCAAGACAGCAAAGGAGTTCTCATCTACTAATAAATTAATTTAAGGAGCTATAACTCCCTTAATTTTATCAAATATTCACATACACGGTTGCATTTGAGGATTTTCTATATACTCCACTAAATGAGGATGCATTTAGGTTCTTTATAATATTTTATTTCCATCGTTTCATCATCTGTTTATGTTTACAGTAATTTAGTAATAGTTCTCTAATTTTGACAGTAATGGTTGGCTCACAGAAAACATCAACCAACCATATATATTGGTTTATACTGACAAAGAGTTTTTTTTTGTACAGGGAAATTGGTGCCATGAATACAGGAAACTTAAGGCAAAGATTGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAGGATCTAGAATCCCTGAATCTCAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCATTGAAGCACATAATATCAAGAAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAGAAAAAGGAGAGGTCACTGCAGGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGGCAGAAGAATGTGAGGGGCCAGCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCCCAGGCCCAAGCCCAACCCCAAGCCCAGACAAGCTCCTCCTCCTCCTCC-ATGCTGAGGGATCAGCAGGCACTTCTTCCACCA-CAAAATATCT---GCTACCCGCCGGTGATGATGGGCGAGAGAAATGATGCGGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAACTCCGCATCGGAGGTCTTCCGCCATGGATGCTGAGCCACCTCAATGCTTAAGATGATCATCGTCGTCGTCGTCGGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGTCATTGGTATCGATCCTAGCGATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAAAAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCTACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGTGTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCATATAAATATATTTGCATGCCATGCTCCCGTGATGGTTAATTAAAAAAAAAAA] [+] EMBL AK072683 [CCGTCCCCAAAAGCAAAGAGGCCTCTCTCTCTCTCTCTCGCCGATCCCTCTCCTCCTCCTCTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAGCTAGCTTGTAGCAGCTAAGGTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGGGCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACAAGATCAACAGGCAGGTGACGTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGAGGTCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCACTGACTCCAGGATGGACAAAATCCTTGAACGTTATGAGCGCTATTCATATGCTGAAAAGGCTCTTATTTCAGCTGAATCCGAGAGTGAGGTAAAACACAGTAGGTTGTATGATATATAACTTTTACATGAAGGGAATATTATTGTTCCTTTTCTATTGCATTAGCATTTCAATCATATCATTTCCTTGTGGCCTTTTAAATCACATGTTAACAAAGCAGTTTTTCTGAATTCTATCGTTCTACTTGCCAAAACTAGATGTTGGTAACCTTCTGTTTTATACTTTTTAACTTCAAACCTCGTGTCTTTTGCACTCTGGCATATTTCTTAAAATTTCTACTTATTGGGATATCATGCAGGAGAGTCCTCATTCCCTTCATTTAATCCCCTCAAATTTTATTTATTATGGTCATACAATTAATGGGCCACATGCATGGAAGTCGATCGCCAGCTTGCGATCAGCATCCTATCATTAATGTTATGATCTATACTAATTCTTCTGTAAATAAATTAAAATTGCACTAGTTTTTAACTAAATGCTACTATTCTATTTTTTTATCCATACTCCGTTTGAGTGGTTTCTTTTGTGTTTCATGAAGCCATATAATATGCTTAAGAAAACATAGAAACATGCACAATACAATAATAGCGCTGGTAGGATCCGGTTGGAGACCAAATGTTTCGATATTCTAAGTGCATATTTATATATACTAAGTAAAACTGTAATCATAAACATGCATATGGACTGTGATCGATGAAATGTTTCTTCATTTTTTTTTTCAAGATAACTCTTCCCCAGTTGACAACATGCACTGCATCCAGAAGTACTCATGGTATTTGTTTTCAGTACTGTTTGATGAGTAAAACTTTGGTAAGTGTTAAAAAATGATGATAAGTGCAAATATTTGTTCCTTTACCACTTCCACCTTCTTGGAGTAAAGAAAAAAATGTGTGTGGTTTGGCAAAGTTGTTGCATATATCACGGCATTAGTGTGCGGATAATGCGAATAAATGCATCAATAAGCACTAGGAGTAAGTTAATTAGTTCTCTACCTTAATTGAAAAGTTCATGTACATTTAAAAAAATTAAACATGCCTCTTTTTATCATTTGTTGAATTTCTACATTTATCAAGACAGCAAAGGAGTTCTCATCTACTAATAAATTAATTTAAGGAGCTATAACTCCCTTAATTTTATCAAATATTCACATACACGGTTGCATTTGAGGATTTTCTATATACTCCACTAAATGAGGATGCATTTAGGTTCTTTATAATATTTTATTTCCATCGTTTCATCATCTGTTTATGTTTACAGTAATTTAGTAATAGTTCTCTAATTTTGACAGTAATGGTTGGCTCACAGAAAACATCAACCAACCATATATATTGGTTTATACTGACAAAGAGTTTTTTTTTGTACAGGGAAATTGGTGCCATGAATACAGGAAACTTAAGGCAAAGATTGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAGGATCTAGAATCCCTGAATCTCAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCATTGAAGCACATAATATCAAGAAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAGAAAAAGGAGAGGTCACTGCAGGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGGCAGAAGAATGTGAGGGGCCAGCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCCCAGGCCCAAGCCCAACCCCAAGCCCAGACAAGCTCCTCCTCCTCCTCC ATGCTGAGGGATCAGCAGGCACTTCTTCCACCA CAAAATATCT GCTACCCGCCGGTGATGATGGGCGAGAGAAATGATGCGGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAACTCCGCATCGGAGGTCTTCCGCCATGGATGCTGAGCCACCTCAATGCTTAAGATGATCATCGTCGTCGTCGTCGGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGTCATTGGTATCGATCCTAGCGATGATATATATGATTCTCCTAAAATGAAATTTATCTCAAAAAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCTACAGGCTACATATGATTTGCAAGAAATTAATT ] [+] EMBL AU101197 [ CTCCTCNTCCAATGCTGAGGGATCAGCAGGCACTTCTTCCACCACCAAAATATCTGTAGCTACCCGCCGGTGATGATGGGCGAGAGAAATGATGCGGCGGCGGCGGCGGCGNTGGCGGCNCAGGGCCAGGTGCAA TCCGCATCGGAGGTCTTCCGCCATGGATGCTGAGCCACCTCAATGCTTAAGATGATCATCGTCNTCGTCGTCGGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGTCATTGGTATCGATCCTAGCGATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAAAAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCTACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGTGTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCATATAAATATATTTGCATGCCATGCTCCCGTGATGGTTAATTAAAAAAAAAAA] [+] EMBL AU108285 [ ATGATGCGGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAACTCCGCATCGGAGGTCTTCCGCCATGGATGCTGAGCCACCTCAATGCTTAAGATGATCATCGTCGTCGTCGTCGGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGTCATTGGTATCGATCCTAGCGATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAAAAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCTACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGTGTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCATATAAATATATTTGCATGCCATGCTCCCGTGATGGTTAATTAAAAAAA ] [+] EMBL AU108288 [ CTCCGCATCGGAGGTCTTCCGCCATGGATGCTGAGCCACCTCAATGCTTAAGATGATCATCGTCGTCGTCGTCGGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGTCATTGGTATCGATCCTAGCGATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAAAAAACAANCCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCTACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGTGTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCATATAAATATATTTGCATGCCATGCTCCCGTGATGGTTAATTAAAAA ] consensusID : consensus_12078#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1330 fasta sequence [CTCTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAGCTAGCTTGTAGCAGCTAAGGTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGGGCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACTCGATGAACCGGCAGGTGACGTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGAGGTCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCACTGACTCCAGGATGGACAAAATCCTTGAACGTTATGAGCGCTATTCATATGCTGAAAAGGCTCTTATTTCAGCTGAATCTGAGAGTGAGGGAAATTGGTGCCATGAATACAGGAAGCTTAAGGCAAAGATTGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAGGATCTAGAATCCCTGAATCTCAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCATTGAAGCACATAAGATCAAGAAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAGAAAAAGGAGAGGTCACTGCAGGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGGCAGAAGAATGTGAGGGGCCAGCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCCCAGGCCCAAGCCCAACCCCAAGCCCAGACAAGCTTCTTCTTCTTCTTCATGCTGAGGGATCAGCAGGCACTTCTTTCACCACAAAATATCTGCTACCCGCCGGTGATGATGGGCCAGAGAAATGATGCGGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAAC-TCCGCATCGGAGGTCTTCCGCCATGGATGCTGAGCCACC-TCAATGCTTAAGATGATCATCGTCGTCGTCGTC-GGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATG-AATTGAAGTCATTGGTATCGATCCTAGC-GATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAAAAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCTACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGTGTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCATATAAATATATTTGCATGCCATGCTCCCGTGATGGTTAATTAATTTATGATTGTGTTTATACGCTAATTAACTGCAGATGCAAACTAATCA] [+] EMBL AF345911 [CTCTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAGCTAGCTTGTAGCAGCTAAGGTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGGGCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACTCGATGAACCGGCAGGTGACGTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGAGGTCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCACTGACTCCAGGATGGACAAAATCCTTGAACGTTATGAGCGCTATTCATATGCTGAAAAGGCTCTTATTTCAGCTGAATCTGAGAGTGAGGGAAATTGGTGCCATGAATACAGGAAGCTTAAGGCAAAGATTGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAGGATCTAGAATCCCTGAATCTCAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCATTGAAGCACATAAGATCAAGAAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAGAAAAAGGAGAGGTCACTGCAGGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGGCAGAAGAATGTGAGGGGCCAGCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCCCAGGCCCAAGCCCAACCCCAAGCCCAGACAAGCTTCTTCTTCTTCTTCATGCTGAGGGATCAGCAGGCACTTCTTTCACCACAAAATATCTGCTACCCGCCGGTGATGATGGGCCAGAGAAATGATGCGGCGGC GCGGCGGCGGTGGCGGCCCAAGGCCAGGTGCAACTTCCGCATTGGAGGCTTTCCGCCATGGATGCTGAG CACCTTCAAGGCTTAAGATGATCATCGGCGTCGTCGTCGGGCCAACAAGTTGCCGATTGCACCGGGAATCATGGGAGCAACCTTGAATGAAATGGAAG CATTGGGAT TGGAAGCGGATAATATATATGAATCTCCTAAAAGGAAATGGA CTCAAAAAAAAAAACCTAGCGATTAAGCTATTCTTATATATGCGTTTGCCTGCTGCTCCCTACCCTACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGTGTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCATATAAATATATTTGCATGCCATGCTCCCGTGATGGTTAATTAATTTATGATTGTGTTTATACGCTAATTAACTGCAGATGCAAACTAATCA] [+] EMBL AB003325 [CTCTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAGCTAGCTTGTAGCAGCTAAGGTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGGGCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACAAGATCAACAGGCAGGTGACGTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGAGGTCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCACTGACTCCAGGATGGACAAAATCCTTGAACGTTATGAGCGCTATTCATATGCTGAAAAGGCTCTTATTTCAGCTGAATCCGAGAGTGAGGGAAATTGGTGCCATGAATACAGGAAACTTAAGGCAAAGATTGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAGGATCTAGAATCCCTGAATCTCAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCATTGAAGCACATAATATCAAGAAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAGAAAAAGGAGAGGTCACTGCAGGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGGCAGAAGAATGTGAGGGGCCAGCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCCCAGGCCCAAGCCCAACCCCAAGCCCAGACAAGCTCCTCCTCCTCCTCCATGCTGAGGGATCAGCAGGCACTTCTTCCACCACAAAATATCTGCTACCCGCCGGTGATGATGGGCGAGAGAAATGATGCGGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAAC TCCGCATCGGAGGTCTTCCGCCATGGATGCTGAGCCACC TCAATGCTTAAGATGATCATCGTCGTCGTCGTC GGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATG AATTGAAGTCATTGGTATCGATCCTAGC GATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAAAAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCTACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGTGTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCATATAAATATATTTGCATGCCATGCTCCCGTG ] [+] EMBL AU070008 [ AATGATGCGGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAAC TCCGCATCGGAGGTCTTCCGCCATGGATGCTGAGCCACC TCAATGCTTAAGATGATCATCGTCGTCGTCGTC GGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATG AATTGAAGTCATTGGTATCGATCCTAGC GATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAAAAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTA ] consensusID : consensus_12078#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1274 fasta sequence [CTCTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAGCTAGCTTGTAGCAGCTAAGGTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGGGCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACAAGATCAACAGGCAGGTGACGTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGAGGTCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCACTGACTCCAGGATGGACAAAATCCTTTGAACGTT-ATGAAGCGCTATTCATATGCTGAAAAGGCTCTTA-TTTCAGCTGAATCCGAAAGTGAGGG--AATTTGGTGCCATGAATACAGGGAACTTTANGGAAAGATTGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAGGATCATGAATCCCTGAATCTCAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCATTGAAGCACATAATATCAAGAAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAGAAAAAGGAGAGGTCACTGCAGGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGGCAGAAGAATGTGAGGGGCCAGCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCCCAGGCCCAAGCCCAACCCCAAGCCCAGACAAGCTCCTCCTCCTCCTCCATGCTGAGGGATCAGCAGGCACTTCTTCCACCACAAAATATCTGCTACCCGCCGGTGATGATGGGCGAGAGAAATGATGCGGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAACTCCGCATCGGAGGTCTTCCGCCATGGATGCTGAGCCACCTCAATGCTTAAGATGATCATCGTCGTCGTCGTCGGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGTCATTGGTATCGATCCTAGCGATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAAAAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCTACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGTGTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCATATAAATATATTTGCATGCCAAAAAAAAAAAAA] [+] EMBL C74564 [CTCTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAGCTAGCTTGTAGCAGCTAAGGTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGGGCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACAAGATCAACAGGCAGGTGACGTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGAGGTCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCACTGACTCCAGGATGGACAAAATCCTTTGAACGTT ATGAAGCGCTATTCATATGCTGAAAAGGCTCTTATTTTCAGCTGAATCNGAAAGTTAGGGGNAATTTGGTGNCATGAATACAGGGAACTTTANGG ] [+] EMBL AF058698 [ TTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAGCTAGCTTGTAGCAGCTAAGGTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGGGCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACAAGATCAACAGGCAGGTGACGTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGAGGTCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCACTGACTCCAGGATGGACAAAATCC TTGAACGTT ATG AGCGCTATTCATATGCTGAAAAGGCTCTTA TTTCAGCTGAATCCGAGAGTGAGGG AAATTGGTGCCATGAATACAGGAAACTTAAGGCAAAGATTGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAGGATCATGAATCCCTGAATCTCAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCATTGAAGCACATAATATCAAGAAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAGAAAAAGGAGAGGTCACTGCAGGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGGCAGAAGAATGTGAGGGGCCAGCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCCCAGGCCCAAGCCCAACCCCAAGCCCAGACAAGCTCCTCCTCCTCCTCCATGCTGAGGGATCAGCAGGCACTTCTTCCACCACAAAATATCTGCTACCCGCCGGTGATGATGGGCGAGAGAAATGATGCGGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAACTCCGCATCGGAGGTCTTCCGCCATGGATGCTGAGCCACCTCAATGCTTAAGATGATCATCGTCGTCGTCGTCGGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGTCATTGGTATCGATCCTAGCGATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAAAAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCTACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGTGTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCATATAAATATATTTGCATGCCAAAAAAAAAAAAA] [+] EMBL C72923 [ TCGTCTTCCTCCTTCAGCNAGCTTGTAGCAGCNAAGGTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGGGCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACAAGATCAACAGGCAGGTGACGTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGAGGTCGCCGCAATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCANTGACTCCAGGATGGACAAAATCCTTTGAACGTTAATGAAGCGCNATTCATATGCTGAAAAGGCTCTAA TTTAAGCTGAATCCGAAANTAAGGG AATTTGGTGCCATGAATANAGGG ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 CCGTCCCCAAAAGCAAAGAGGCCTCTCTCTCTCTCTCTCGCCGATCCCTCTCCTCCTCCT 60 consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 CTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAGCTAGCTTGTAGCAGCTAAG 120 consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 GTTAGGTCGGATCGAGATCGGGATCGGCCGCCGGCGAGCGGCGAGCGGCGAGGATGGGGC 180 consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 GGGGGAAGGTGCAGCTGAAGCGGATAGAGAACAAGATCAACAGGCAGGTGACGTTCTCCA 240 consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 AGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGCGACGCCGAGG 300 consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 TCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACGCCACTGACTCCAGGA 360 consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 TGGACAAAATCCTTGAACGTTATGAGCGCTATTCATATGCTGAAAAGGCTCTTATTTCAG 420 consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 CTGAATCCGAGAGTGAGGTAAAACACAGTAGGTTGTATGATATATAACTTTTACATGAAG 480 consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 GGAATATTATTGTTCCTTTTCTATTGCATTAGCATTTCAATCATATCATTTCCTTGTGGC 540 consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 CTTTTAAATCACATGTTAACAAAGCAGTTTTTCTGAATTCTATCGTTCTACTTGCCAAAA 600 consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 CTAGATGTTGGTAACCTTCTGTTTTATACTTTTTAACTTCAAACCTCGTGTCTTTTGCAC 660 consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 TCTGGCATATTTCTTAAAATTTCTACTTATTGGGATATCATGCAGGAGAGTCCTCATTCC 720 consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 CTTCATTTAATCCCCTCAAATTTTATTTATTATGGTCATACAATTAATGGGCCACATGCA 780 consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 TGGAAGTCGATCGCCAGCTTGCGATCAGCATCCTATCATTAATGTTATGATCTATACTAA 840 consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 TTCTTCTGTAAATAAATTAAAATTGCACTAGTTTTTAACTAAATGCTACTATTCTATTTT 900 consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 TTTATCCATACTCCGTTTGAGTGGTTTCTTTTGTGTTTCATGAAGCCATATAATATGCTT 960 consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 AAGAAAACATAGAAACATGCACAATACAATAATAGCGCTGGTAGGATCCGGTTGGAGACC 1020 consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 AAATGTTTCGATATTCTAAGTGCATATTTATATATACTAAGTAAAACTGTAATCATAAAC 1080 consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 ATGCATATGGACTGTGATCGATGAAATGTTTCTTCATTTTTTTTTTCAAGATAACTCTTC 1140 consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 CCCAGTTGACAACATGCACTGCATCCAGAAGTACTCATGGTATTTGTTTTCAGTACTGTT 1200 consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 TGATGAGTAAAACTTTGGTAAGTGTTAAAAAATGATGATAAGTGCAAATATTTGTTCCTT 1260 consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 TACCACTTCCACCTTCTTGGAGTAAAGAAAAAAATGTGTGTGGTTTGGCAAAGTTGTTGC 1320 consensus_12078#1 ------------------------------------------------------------ consensus_12078#2 ------------------------------------------------------------ consensus_12078#0 ATATATCACGGCATTAGTGTGCGGATAATGCGAATAAATGCATCAATAAGCACTAGGAGT 1380 consensus_12078#1 -------CTCTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAG---CTAGCTT 50 consensus_12078#2 -------CTCTTCTTCTTCTTCCACTAGCTAGTTCGTCTTCCTCCTTCAG---CTAGCTT 50 consensus_12078#0 AAGTTAATTAGTTCTCTACCTTAATTGAAAAGTTCATGTACATTTAAAAAAATTAAACAT 1440 * * *** * * * * ***** * * * * * * * * consensus_12078#1 GTAGCAGCTAAGGTTAGGTCGGATCGAGATCGGGATC--GGCCGCCGGCGAGCGGCGAGC 108 consensus_12078#2 GTAGCAGCTAAGGTTAGGTCGGATCGAGATCGGGATC--GGCCGCCGGCGAGCGGCGAGC 108 consensus_12078#0 GCCTCTTTTTATCATTTGTTGAATTTCTACATTTATCAAGACAGCAAAGGAGTTCTCATC 1500 * * * * * ** * ** * *** * * ** *** * * consensus_12078#1 GGCGAGGATGG-GGCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACTCGATGAACCGGC 167 consensus_12078#2 GGCGAGGATGG-GGCGGGGGAAGGTGCAGCTGAAGCGGATAGAGAACAAGATCAACAGGC 167 consensus_12078#0 TACTAATAAATTAATTTAAGGAGCTATAACTCCCTTAATTTTATCAAATATTCACATACA 1560 * * * * ** * * ** * * * * * consensus_12078#1 AGGTGACGTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCC 227 consensus_12078#2 AGGTGACGTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAGGCGCACGAGATCTCCGTCC 227 consensus_12078#0 CGGTTGCATTTGAGGATTTTCTATATACTCCACTAAATGAGG---ATGC-ATTTAGGTTC 1616 *** * ** * ** ** ** *** * * ** * ** * consensus_12078#1 TCTGCGACGCCGAGGTCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACG 287 consensus_12078#2 TCTGCGACGCCGAGGTCGCCGCCATCGTCTTCTCCCCCAAGGGCAAGCTCTACGAGTACG 287 consensus_12078#0 TTTATAATATT----TTATTTCCATCGTTTCATCATCTGTTTATGTTTACAGTAATTTAG 1672 * * * * ******* * ** * * * * * consensus_12078#1 CCACTGA-CTCCAGGATGGACAAAATCCTT-GAACGTTATGA-GCGCTATTCATATGC-T 343 consensus_12078#2 CCACTGA-CTCCAGGATGGACAAAATCCTTTGAACGTTATGAAGCGCTATTCATATGC-T 345 consensus_12078#0 TAATAGTTCTCTAATTTTGACAGTAATGGTTGGCTCACAGAAAACATCAACCAACCATAT 1732 * * *** * * **** * * * * * * * ** * consensus_12078#1 GAAAAGGCTCTTATTTCAGCTGAATCTGAGAGTG---AGGGAAATTGGTGCCATGAATAC 400 consensus_12078#2 GAAAAGGCTCTTATTTCAGCTGAATCCGAAAGTG---AGGGAATTTGGTGCCATGAATAC 402 consensus_12078#0 ATATTGGTTTATACTGACAAAGAGTTTTTTTTTGTACAGGGAAATTGGTGCCATGAATAC 1792 * ** * ** * ** * ** ****** **************** consensus_12078#1 AGGAAGCTTAAGGCAAAGATTGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAG 460 consensus_12078#2 AGGGAACTTTANGGAAAGATTGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAG 462 consensus_12078#0 AGGAAACTTAAGGCAAAGATTGAGACCATACAAAAATGTCACAAACACCTCATGGGAGAG 1852 *** * *** * * ********************************************** consensus_12078#1 GATCTAGAATCCCTGAATCTCAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCA 520 consensus_12078#2 GATCATGAATCCCTGAATCTCAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCA 522 consensus_12078#0 GATCTAGAATCCCTGAATCTCAAAGAACTCCAACAGCTAGAGCAGCAGCTGGAGAGTTCA 1912 **** ****************************************************** consensus_12078#1 TTGAAGCACATAAGATCAAGAAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAG 580 consensus_12078#2 TTGAAGCACATAATATCAAGAAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAG 582 consensus_12078#0 TTGAAGCACATAATATCAAGAAAGAGCCACCTTATGCTTGAGTCCATTTCCGAGCTGCAG 1972 ************* ********************************************** consensus_12078#1 AAAAAGGAGAGGTCACTGCAGGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGG 640 consensus_12078#2 AAAAAGGAGAGGTCACTGCAGGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGG 642 consensus_12078#0 AAAAAGGAGAGGTCACTGCAGGAGGAGAACAAGGCTCTGCAGAAGGAACTGGTGGAGAGG 2032 ************************************************************ consensus_12078#1 CAGAAGAATGTGAGGGGCCAGCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCC 700 consensus_12078#2 CAGAAGAATGTGAGGGGCCAGCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCC 702 consensus_12078#0 CAGAAGAATGTGAGGGGCCAGCAGCAAGTAGGGCAGTGGGACCAAACCCAGGTCCAGGCC 2092 ************************************************************ consensus_12078#1 CAGGCCCAAGCCCAACCCCAAGCCCAGACAAGCTTCTTCTTCTTCTTCATGCTGAGGGAT 760 consensus_12078#2 CAGGCCCAAGCCCAACCCCAAGCCCAGACAAGCTCCTCCTCCTCCTCCATGCTGAGGGAT 762 consensus_12078#0 CAGGCCCAAGCCCAACCCCAAGCCCAGACAAGCTCCTCCTCCTCCTCCATGCTGAGGGAT 2152 ********************************** ** ** ** ** ************* consensus_12078#1 CAGCAGGCACTTCTTTCACCACAAAATATCTGCTACCCGCCGGTGATGATGGGCCAGAGA 820 consensus_12078#2 CAGCAGGCACTTCTTCCACCACAAAATATCTGCTACCCGCCGGTGATGATGGGCGAGAGA 822 consensus_12078#0 CAGCAGGCACTTCTTCCACCACAAAATATCTGCTACCCGCCGGTGATGATGGGCGAGAGA 2212 *************** ************************************** ***** consensus_12078#1 AATGATGCGGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAACTCCGCATCGGA 880 consensus_12078#2 AATGATGCGGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAACTCCGCATCGGA 882 consensus_12078#0 AATGATGCGGCGGCGGCGGCGGCGGTGGCGGCGCAGGGCCAGGTGCAACTCCGCATCGGA 2272 ************************************************************ consensus_12078#1 GGTCTTCCGCCATGGATGCTGAGCCACCTCAATGCTTAAGATGATCATCGTCGTCGTCGT 940 consensus_12078#2 GGTCTTCCGCCATGGATGCTGAGCCACCTCAATGCTTAAGATGATCATCGTCGTCGTCGT 942 consensus_12078#0 GGTCTTCCGCCATGGATGCTGAGCCACCTCAATGCTTAAGATGATCATCGTCGTCGTCGT 2332 ************************************************************ consensus_12078#1 CGGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGT 1000 consensus_12078#2 CGGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGT 1002 consensus_12078#0 CGGCCAAACAGCTGCCGTATGCACCGTGAATCATGGGAGCAACCTTGAATGAATTGAAGT 2392 ************************************************************ consensus_12078#1 CATTGGTATCGATCCTAGCGATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAA 1060 consensus_12078#2 CATTGGTATCGATCCTAGCGATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAA 1062 consensus_12078#0 CATTGGTATCGATCCTAGCGATAATATATATGATTCTCCTAAAATGAAATTGATCTCAAA 2452 ************************************************************ consensus_12078#1 AAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCT 1120 consensus_12078#2 AAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCT 1122 consensus_12078#0 AAAACAAACCTAGCGATTAAGCTATTCTTATATATGTGTTTGCCTGCTGCCCCCTACCCT 2512 ************************************************************ consensus_12078#1 ACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGT 1180 consensus_12078#2 ACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGT 1182 consensus_12078#0 ACAGGCTACATATGATTTGCAAGAAATTAATTATGAGCAAGGATCAGGATGTGTCTTTGT 2572 ************************************************************ consensus_12078#1 GTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCAT 1240 consensus_12078#2 GTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCAT 1242 consensus_12078#0 GTAATCATCAGCACGTACCTAGTGCTTCCTACTGATATATATGCATGCAATTGTGTGCAT 2632 ************************************************************ consensus_12078#1 ATAAATATATTTGCATGCCATGCTCCCGTGATGGTTAATTAATTTATGATTGTGTTTATA 1300 consensus_12078#2 ATAAATATATTTGCATGCCAAAAAAAAAAAAA---------------------------- 1274 consensus_12078#0 ATAAATATATTTGCATGCCATGCTCCCGTGATGGTTAATTAAAAAAAAAAA--------- 2683 ******************** * consensus_12078#1 CGCTAATTAACTGCAGATGCAAACTAATCA 1330 consensus_12078#2 ------------------------------ consensus_12078#0 ------------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||