cluster # 12080

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Oryza sativa
cluster # 12080 cluster # 12080 Sequences # 10 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12080#0 length = 2674 sequences # 3
consensus_12080#1 length = 1234 sequences # 4

consensus_12080#2 length = 375 sequences # 1
consensus_12080#3 length = 347 sequences # 2

consensusID : consensus_12080#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2674
fasta sequence

                              [TTCCTCCTCTCCTCTCTCCCTGCTTCTGATGCTGCTGTCCCAACTGTAGCAGTAGCCACCACCTTCTCCATCTCGTCGGCTCTGATTAGATTTCTTGATGTCGTGTTAGCCTTTCCCTGTTCCTTTAGCTAAAGAATTTAACGGCAGTGGGGCAGAGACGGATTGATGCCATTGTTCGATTCTTTCTCCTCCTTTTGCTTCCTTTTAAGCATTGCTTTTCCTGGCCATCCTTTTCCATTCCCATTTGTTTTGTAGGCTAGCTGCCATAGCCTTTTTCTCGTCTTCCAGGGCTAGTATCTCAGTATCTCCACTTGCTTCTCATTCTTATAATCGTCGTCGTCGTCTTCCTCTGTGATCTGTGGTTGCCTTCTCTGCTTCGCCTCCATTTCTGTTCTTGGCTGCTTGTTCTTCTTCTTGGGCGTTGTTAGCCAAGAAAGCGAATTCGTTTCTTTTTTTCTTGAGCGATTTGAGCTCGGTTCTTTCTGCTTTGGACAGCGATTGAGTGAATGAGTGAGTGAGTGAGTGAACTCATGGCCTTTCCTGCTTTCTTCATGGACAGCTCACTCTGCACAGCTCAAGGTTCTTGCTGAGTGAAGCAGAGAACTTTAGCTGCTGCCGCCATGGATAGGGCGTCAAGATCAGGTGTTCTTTCAGAGACGGCTTCTTTCGCCGACACTCCGAGGTCCATCTATTCGTCCTGCAATCTCCAGCATCTTCAGTCACAGAGTATCCGGAAGATACATGAAGGTGCCTTGGATATATCGCCACGATTCTCCTACT-GCAACCCTAATGCTAGTCAGGACAAGATACTGCACAGAAGATTCTCACTTAACTTGCCAGAGCATATGCCAGGCCATTACTCCAGGACAGTAACTGAAAGAAATCAAAAGGCTGCTTCAAAGTCCATCACAGATCTAGTCGTGGAGATTGCGGCCCTTGAGCAGGAAGTCGTCCGAAAGGAATTGCATCTGCTATCCCTCTATAGAAAAGCATTTGATCAGTATTTATCGGAGTCTGGCAGTGTTACGAGTGAGGTGGATCAAGAATTGCTGAAAAACATTGACGAGGGTGCCCTTCGTTTGAAAGACATCAAGCAATCTGCAGCCTTCAACTTACCAATAGTCTCAGATACTAAAAGTGAGGTATCAAGATCACCTTCAAGGCATTCCAGCCTTGTTAACTTCTTGAGTGCATCTATTTCTGAATATGTACCCAAGATCTCTTGCAAACTATCAGAAGACATTCTGAGCTGCATAGCTGCTGTCTACTGTAAACTCGGAAGCGTGCCACTGCAAGATAGCGAATACATAACCTCCCCCAGTCCTTCTGTTTCATCTTCAAGTACTTTTTCTCCGAGGAACCGCAATGATAGCTGGAGCCCTCGGTACAACTTCGATATCACCCCGAGCCCTCGCCAATATGGATACGAGAAAGAGAATAATGAACAAAAGAACATAGGCATGATAATTGTCCCAAGGATACGAATAGATGCTGACAAGTTTGATTACGCCTCAAAAATGCTTGAGACTATCAGGTCCCTGATTCAACGGCTTGAAAAAATTGACCCAACAAAGATGACACACGAGGAGCAACTCTGCTTTTGGATTAACATCCACAATGCTTTAGTCATGCATGCATTTTTGGCCTACGGGCTGCACGATAAACGCATGAAAAGCACGGACATGATTCTGAAGGCTGCGTATAATGTTGGTGGGCAGTCAGTAAACGCTCAAATAATCCAGAACTCAATTCTTGGATGCCAATCCCATCGTCCTTCGCTGTGGGTTCGGGCGCTGTTCGCACCAACGAAGAGATCCATGGCAGGGACAGCCAGGCATCCATATGCCCTTCAGCATCCAGAGCCAGTTGCTCATTTTGCCCTCTCCACTGGAGCATTTTCAGATCCACCTGTGAGGCTGTACAGTGCGAAGAAGATACACCAGCAGCTGGAGGTGGCGAGGACGGAGTTCATCCAGGCGAACGTGGTGGCGAGGAGGCAGGCGCTGATGCTGCCCAAGGTGCTGCACTACTACGCCAAGGACGCGGCGCTGGAGCTGCGGCATGTGGTGGAGCTGGTGTGCGAGAGCATCTCGGAGGCGCAGCAGCGGGAGATCCAGCTCTGCCTCAGGAGGAGGATCGACAAGTGCGTCGAGTGGCTGCCCTACAAGTCCTCCTTCAGATACGTTGTACATAGGGACCTGGCCGAGTAGGCATGCAGCAAAAAAGGATTTGGGTTCGTTTTATTCTTCTTCTTCTTCTTTTCTTTGTTTTCTTTTCTTTTTTGTTTGAAATTCAAATTTCAAATTGCGGTTTGGATGTGCAGTGCTGTCTCGTTGTGGTGTAAGTAAAAGAACGGATTTCTGGTGAGGGCAATGGCGTGGGTTGGGTTTGTAATGGATTTTGCGTTGTGTGTGTATGTGTGTGTAAATATAGGTGATTTGTGAGTTGTGATGCTAATAGTATGGCAGTGTCGACAACTCGACAATAAAGGGGAGAAATATTGGTAACTTTGTCACAGTTCGATTTTGTCACGAGTGCCAAAACTTTCGCCACAAAGTGAGAGTATGACATGTTGAACATGTATTCTTAGCTTAACTTCCAGAACAGTATGGCATGTTGAATCATGTGCTTAGTAAAGTGTAGCTTGTCTTAGCTTAAAAAAAAAAAAAAAAGG]

[+] EMBL CB634057             [TTCCTCCTCTCCTCTCTCCCTGCTTCTGATGCTGCTGTCCCAACTGTAGCAGTAGCCACCACCTTCTCCATCTCGTCGGCTCTGATTAGATTTCTTGATGTCGTGTTAGCCTTTCCCTGTTCCTTTAGCTAAAGAATTTAACGGCAGTGGGGCAGAGACGGATTGATGCCATTGTTCGATTCTTTCTCCTCCTTTTGCTTCCTTTTAAGCATTGCTTTTCCTGGCCATCCTTTTCCATTCCCATTTGTTTTGTAGGCTAGCTGCCATAGCCTTTTTCTCGTCTTCCAGGGCTAGTATCTCAGTATCTCCACTTGCTTCTCATTCTTATAATCGTCGTCGTCGTCTTCCTCTGTGATCTGTGGTTGCCTTCTCTGCTTCGCCTCCATTTCTGTTCTTGGCTGCTTGTTCTTCTTCTTGGGCGTTGTTAGCCAAGAAAGCGAATTCGTTTCTTTTTTTCTTGAGCGATTTGAGCTCGGTTCTTTCTGCTTTGGACAGCGATTGAGTGAATGAGTGAGTGAGTGAGTGAACTCATGGCCTTTCCTGCTTTCTTCATGGACAGCTCACTCTGCACAGCTCAAGGTTCTTGCTGAGTGAAGCAGAGAACTTTAGCTGCTGCCGCCATGGATAGGGCGTCAAGATCAGGTGTTCTTTCAGAGACGGCTTCTTTCGCCGACACTCCGAGGTCCATCTATTCGTCCTGCAATCTCCAGCATCTTCAGTCACAGAGTATCCGGAAGATACATGAAGGTGCCTTGGATATATCGCCACGATTCTCCTACTGGCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK102021             [                                      CCCAACTGTAGCAGTAGCCACCACCTTCTCCATCTCGTCGGCTCTGATTAGATTTCTTGATGTCGTGTTAGCCTTTCCCTGTTCCTTTAGCTAAAGAATTTAACGGCAGTGGGGCAGAGACGGATTGATGCCATTGTTCGATTCTTTCTCCTCCTTTTGCTTCCTTTTAAGCATTGCTTTTCCTGGCCATCCTTTTCCATTCCCATTTGTTTTGTAGGCTAGCTGCCATAGCCTTTTTCTCGTCTTCCAGGGCTAGTATCTCAGTATCTCCACTTGCTTCTCATTCTTATAATCGTCGTCGTCGTCTTCCTCTGTGATCTGTGGTTGCCTTCTCTGCTTCGCCTCCATTTCTGTTCTTGGCTGCTTGTTCTTCTTCTTGGGCGTTGTTAGCCAAGAAAGCGAATTCGTTTCTTTTTTTCTTGAGCGATTTGAGCTCGGTTCTTTCTGCTTTGGACAGCGATTGAGTGAATGAGTGAGTGAGTGAGTGAACTCAGGGCCTTTCCTGCTTTCTTCATGGACAGCTCACTCTGCACAGCTCAAGGTTCTTGCTGAGTGAAGCAGAGAACTTTAGCTGCTGCCGCCATGGATAGGGCGTCAAGATCAGGTGTTCTTTCAGAGACGGCTTCTTTCGCCGACACTCCGAGGTCCATCTATTCGTCCTGCAATCTCCAGCATCTTCAGTCACAGAGTATCCGGAAGATACATGAAGGTGCCTTGGATATATCGCCACGATTCTCCTACT GCAAACCTAATGCTAGTCAGGACAAGATACTGCACAGAAGATTCTCACTTAACTTGCCAGAGCATATGCCAGGCCATTACTCCAGGACAGTAACTGAAAGAAATCAAAAGGCTGCTTCAAAGTCCATCACAGATCTAGTCGTGGAGATTGCGGCCCTTGAGCAGGAAGTCGTCCGAAAGGAATTGCATCTGCTATCCCTCTATAGAAAAGCATTTGATCAGTATTTATCGGAGTCTGGCAGTGTTACGAGTGAGGTGGATCAAGAATTGCTGAAAAACATTGACGAGGGTGCCCTTCGTTTGAAAGACATCAAGCAATCTGCAGCCTTCAACTTACCAATAGTCTCAGATACTAAAAGTGAGGTATCAAGATCACCTTCAAGGCATTCCAGCCTTGTTAACTTCTTGAGTGCATCTATTTCTGAATATGTACCCAAGATCTCTTGCAAACTATCAGAAGACATTCTGAGCTGCATAGCTGCTGTCTACTGTAAACTCGGAAGCGTGCCACTGCAAGATAGCGAATACATAACCTCCCCCAGTCCTTCTGTTTCATCTTCAAGTACTTTTTCTCCGAGGAACCGCAATGATAGCTGGAGCCCTCGGTACAACTTCGATATCACCCCGAGCCCTCGCCAATATGGATACGAGAAAGAGAATAATGAACAAAAGAACATAGGCATGATAATTGTCCCAAGGATACGAATAGATGCTGACAAGTTTGATTACGCCTCAAAAATGCTTGAGACTATCAGGTCCCTGATTCAACGGCTTGAAAAAATTGACCCAACAAAGATGACACACGAGGAGCAACTCTGCTTTTGGATTAACATCCACAATGCTTTAGTCATGCATGCATTTTTGGCCTACGGGCTGCACGATAAACGCATGAAAAGCACGGACATGATTCTGAAGGCTGCGTATAATGTTGGTGGGCAGTCAGTAAACGCTCAAATAATCCAGAACTCAATTCTTGGATGCCAATCCCATCGTCCTTCGCTGTGGGTTCGGGCGCTGTTCGCACCAACGAAGAGATCCATGGCAGGGACAGCCAGGCATCCATATGCCCTTCAGCATCCAGAGCCAGTTGCTCATTTTGCCCTCTCCACTGGAGCATTTTCAGATCCACCTGTGAGGCTGTACAGTGCGAAGAAGATACACCAGCAGCTGGAGGTGGCGAGGACGGAGTTCATCCAGGCGAACGTGGTGGCGAGGAGGCAGGCGCTGATGCTGCCCAAGGTGCTGCACTACTACGCCAAGGACGCGGCGCTGGAGCTGCGGCATGTGGTGGAGCTGGTGTGCGAGAGCATCTCGGAGGCGCAGCAGCGGGAGATCCAGCTCTGCCTCAGGAGGAGGATCGACAAGTGCGTCGAGTGGCTGCCCTACAAGTCCTCCTTCAGATACGTTGTACATAGGGACCTGGCCGAGTAGGCATGCAGCAAAAAAGGATTTGGGTTCGTTTTATTCTTCTTCTTCTTCTTTTCTTTGTTTTCTTTTCTTTTTTGTTTGAAATTCAAATTTCAAATTGCGGTTTGGATGTGCAGTGCTGTCTCGTTGTGGTGTAAGTAAAAGAACGGATTTCTGGTGAGGGCAATGGCGTGGGTTGGGTTTGTAATGGATTTTGCGTTGTGTGTGTATGTGTGTGTAAATATAGGTGATTTGTGAG                                                                                                                                                                                                                                     ]
[-] EMBL CB634058             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCATTTTGCCCTCTCCACTGGAGCATTTTCAGATCCACCTGTGAGGCTGTACAGTGCGAAGAAGATACACCAGCAGCTGGAGGTGGCGAGGACGGAGTTCATCCAGGCGAACGTGGTGGCGAGGAGGCAGGCGCTGATGCTGCCCAAGGTGCTGCACTACTACGCCAAGGACGCGGCGCTGGAGCTGCGGCATGTGGTGGAGCTGGTGTGCGAGAGCATCTCGGAGGCGCAGCAGCGGGAGATCCAGCTCTGCCTCAGGAGGAGGATCGACAAGTGCGTCGAGTGGCTGCCCTACAAGTCCTCCTTCAGATACGTTGTACATAGGGACCTGGCCGAGTAGGCATGCAGCAAAAAAGGATTTGGGTTCGTTTTATTCTTCTTCTTCTTCTTTTCTTTGTTTTCTTTTCTTTTTTGTTTGAAATTCAAATTTCAAATTGCGGTTTGGATGTGCAGTGCTGTCTCGTTGTGGTGTAAGTAAAAGAACAGATTTCTGGTGAGGGCAATGGCGTGGGTTGGGTTTGTAATGGATTTTGCGTTGTGTGTGTATGTGTGTGTAAATATAGGTGATTTGTGAGTTGTGATGCTAATAGTATGGCAGTGTCGACAACTCGACAATAAAGGGGAGAAATATTGGTAACTTTGTCACAGTTCGATTTTGTCACGAGTGCCAAAACTTTCGCCACAAAGTGAGAGTATGACATGTTGAACATGTATTCTTAGCTTAACTTCCAGAACAGTATGGCATGTTGAATCATGTGCTTAGTAAAGTGTAGCTTGTCTTAGCTTAAAAAAAAAAAAAAAAGG]




>consensus_12080#0
TTCCTCCTCTCCTCTCTCCCTGCTTCTGATGCTGCTGTCCCAACTGTAGCAGTAGCCACC
ACCTTCTCCATCTCGTCGGCTCTGATTAGATTTCTTGATGTCGTGTTAGCCTTTCCCTGT
TCCTTTAGCTAAAGAATTTAACGGCAGTGGGGCAGAGACGGATTGATGCCATTGTTCGAT
TCTTTCTCCTCCTTTTGCTTCCTTTTAAGCATTGCTTTTCCTGGCCATCCTTTTCCATTC
CCATTTGTTTTGTAGGCTAGCTGCCATAGCCTTTTTCTCGTCTTCCAGGGCTAGTATCTC
AGTATCTCCACTTGCTTCTCATTCTTATAATCGTCGTCGTCGTCTTCCTCTGTGATCTGT
GGTTGCCTTCTCTGCTTCGCCTCCATTTCTGTTCTTGGCTGCTTGTTCTTCTTCTTGGGC
GTTGTTAGCCAAGAAAGCGAATTCGTTTCTTTTTTTCTTGAGCGATTTGAGCTCGGTTCT
TTCTGCTTTGGACAGCGATTGAGTGAATGAGTGAGTGAGTGAGTGAACTCATGGCCTTTC
CTGCTTTCTTCATGGACAGCTCACTCTGCACAGCTCAAGGTTCTTGCTGAGTGAAGCAGA
GAACTTTAGCTGCTGCCGCCATGGATAGGGCGTCAAGATCAGGTGTTCTTTCAGAGACGG
CTTCTTTCGCCGACACTCCGAGGTCCATCTATTCGTCCTGCAATCTCCAGCATCTTCAGT
CACAGAGTATCCGGAAGATACATGAAGGTGCCTTGGATATATCGCCACGATTCTCCTACT
GCAACCCTAATGCTAGTCAGGACAAGATACTGCACAGAAGATTCTCACTTAACTTGCCAG
AGCATATGCCAGGCCATTACTCCAGGACAGTAACTGAAAGAAATCAAAAGGCTGCTTCAA
AGTCCATCACAGATCTAGTCGTGGAGATTGCGGCCCTTGAGCAGGAAGTCGTCCGAAAGG
AATTGCATCTGCTATCCCTCTATAGAAAAGCATTTGATCAGTATTTATCGGAGTCTGGCA
GTGTTACGAGTGAGGTGGATCAAGAATTGCTGAAAAACATTGACGAGGGTGCCCTTCGTT
TGAAAGACATCAAGCAATCTGCAGCCTTCAACTTACCAATAGTCTCAGATACTAAAAGTG
AGGTATCAAGATCACCTTCAAGGCATTCCAGCCTTGTTAACTTCTTGAGTGCATCTATTT
CTGAATATGTACCCAAGATCTCTTGCAAACTATCAGAAGACATTCTGAGCTGCATAGCTG
CTGTCTACTGTAAACTCGGAAGCGTGCCACTGCAAGATAGCGAATACATAACCTCCCCCA
GTCCTTCTGTTTCATCTTCAAGTACTTTTTCTCCGAGGAACCGCAATGATAGCTGGAGCC
CTCGGTACAACTTCGATATCACCCCGAGCCCTCGCCAATATGGATACGAGAAAGAGAATA
ATGAACAAAAGAACATAGGCATGATAATTGTCCCAAGGATACGAATAGATGCTGACAAGT
TTGATTACGCCTCAAAAATGCTTGAGACTATCAGGTCCCTGATTCAACGGCTTGAAAAAA
TTGACCCAACAAAGATGACACACGAGGAGCAACTCTGCTTTTGGATTAACATCCACAATG
CTTTAGTCATGCATGCATTTTTGGCCTACGGGCTGCACGATAAACGCATGAAAAGCACGG
ACATGATTCTGAAGGCTGCGTATAATGTTGGTGGGCAGTCAGTAAACGCTCAAATAATCC
AGAACTCAATTCTTGGATGCCAATCCCATCGTCCTTCGCTGTGGGTTCGGGCGCTGTTCG
CACCAACGAAGAGATCCATGGCAGGGACAGCCAGGCATCCATATGCCCTTCAGCATCCAG
AGCCAGTTGCTCATTTTGCCCTCTCCACTGGAGCATTTTCAGATCCACCTGTGAGGCTGT
ACAGTGCGAAGAAGATACACCAGCAGCTGGAGGTGGCGAGGACGGAGTTCATCCAGGCGA
ACGTGGTGGCGAGGAGGCAGGCGCTGATGCTGCCCAAGGTGCTGCACTACTACGCCAAGG
ACGCGGCGCTGGAGCTGCGGCATGTGGTGGAGCTGGTGTGCGAGAGCATCTCGGAGGCGC
AGCAGCGGGAGATCCAGCTCTGCCTCAGGAGGAGGATCGACAAGTGCGTCGAGTGGCTGC
CCTACAAGTCCTCCTTCAGATACGTTGTACATAGGGACCTGGCCGAGTAGGCATGCAGCA
AAAAAGGATTTGGGTTCGTTTTATTCTTCTTCTTCTTCTTTTCTTTGTTTTCTTTTCTTT
TTTGTTTGAAATTCAAATTTCAAATTGCGGTTTGGATGTGCAGTGCTGTCTCGTTGTGGT
GTAAGTAAAAGAACGGATTTCTGGTGAGGGCAATGGCGTGGGTTGGGTTTGTAATGGATT
TTGCGTTGTGTGTGTATGTGTGTGTAAATATAGGTGATTTGTGAGTTGTGATGCTAATAG
TATGGCAGTGTCGACAACTCGACAATAAAGGGGAGAAATATTGGTAACTTTGTCACAGTT
CGATTTTGTCACGAGTGCCAAAACTTTCGCCACAAAGTGAGAGTATGACATGTTGAACAT
GTATTCTTAGCTTAACTTCCAGAACAGTATGGCATGTTGAATCATGTGCTTAGTAAAGTG
TAGCTTGTCTTAGCTTAAAAAAAAAAAAAAAAGG

consensusID : consensus_12080#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1234
fasta sequence

                              [GGACACGATTCTGAAGGCTGCGTATAATGTTGGTGGGCAGTCAGTAAACGCTCAAATAATCCAGAACTCAATTCTTGGATGCCAATCCCATCGTCCTTCGCTGTGGGTTCGGGCGCTGTTCGCACCAACGAAGAGATCCATGGCAGGGACAGCCAGGCATCCATATGCCCTTCAGCATCCAGAGCCAGTTGCTCATTTTGCCCTCTCCACTGGAGCATTTTCAGATCCACCTGTAAGCCACCACTTCCAGCCATACTTCAATCAAGAAATTTTTACGGTCTTCGAGTAGGTACCATATTTTTCTATCGCAAAATTTGGTACTACCCAAGGTACTACTACAAGTACAAGGTAGTACCAGATTCAACGCTAGAAAAAGCTGTACTTCCTGTACCTCTCAAGGACGGTAAAAAATGACTCCAAACATCCATGTAAAAAAAAAAGGAAATATCAAAGCTGTAAGTTGGATCTTGTGTTTGTAGGTGAGGCTGTACAGTGCGAAGAAGATACACCAGCAGCTGGAGGTGGCGAGGACGGAGTTCATCCAGGCGAACGTGGTGGCGAGGAGGCAGGCGCTGATGCTGCCCAAGGTGCTGCACTACTACGCCAAGGACGCGGCGCTGGAGCTGCGGCATGTGGTGGAGCTGGTGTGCGAGAGCATCTCGGAGGCGCAGCAGCGGGAGATCCAGCTCTGCCTCAGGAGGAGGATCGACAAGTGCGTCGAGTGGCTGCCCTACAAGTCCTCCTTCAGATACGTTGTACATAGGGACCTGGCCGAGTAGGCATGCAGCAAAAAAGGATTTGGGTTCGTTTTATTCTTCTTCTTCTTCTTTTCTTTGTTTTCTTTTCTTTTTTGTTTGAAATTCAAATTTCAAATTGCGGTTTGGATGTGCAGTGCTGTCTCGTTGTGGTGTAAGTAAAAGAACAGATTTTTGGTGAGGGCAATGGCGTGGGTTGGGTTTGTAATGGATTTTGCGTTGTGTGTGTATGTGTGTGTAAATATAGGTGATTTGTGAGTTGTGATGCTAATAGTATGGCAGTGTCGACAACTCGACAATAAAGGGGAGAAATATTGGTAACTTTGTCACAGTTCGATTTTGTCACGAGTGCCAAAACTTTCGCCACAAAGTGAGAGTATGACATGTTGAACATGTATTCTTAGCTTAACTTCCAGAACAGTATGGCATGTTGAATCATGTGCTTAATAAAGTGTAGCTTGTCTTAAAAAAAAAAAGGA]

[+] EMBL CB634133             [GGACACGATTCTGAAGGCTGCGTATAATGTTGGTGGGCAGTCAGTAAACGCTCAAATAATCCAGAACTCAATTCTTGGATGCCAATCCCATCGTCCTTCGCTGTGGGTTCGGGCGCTGTTCGCACCAACGAAGAGATCCATGGCAGGGACAGCCAGGCATCCATATGCCCTTCAGCATCCAGAGCCAGTTGCTCATTTTGCCCTCTCCACTGGAGCATTTTCAGATCCACCTGTAAGCCACCACTTCCAGCCATACTTCAATCAAGAAATTTTTACGGTCTTCGAGTAGGTACCATATTTTTCTATCGCAAAATTTGGTACTACCCAAGGTACTACTACAAGTACAAGGTAGTACCAGATTCAACGCTAGAAAAAGCTGTACTTCCTGTACCTCTCAAGGACGGTAAAAAATGACTCCAAACATCCATGTAAAAAAAAAAGGAAATATCAAAGCTGTAAGTTGGATCTTGTGTTTGTAGGTGAGGCTGTACAGTGCGAAGAAGATACACCAGCAGCTGGAGGTGGCGAGGACGGAGTTCATCCAGGCGAACGTGGTGGCGAGGAGGCAGGCGCTGATGCTGCCCAAGGTGCTGCACTACTACGCCAAGGACGCGGCGCTGGAGCTGCGGCATGTGGTGGAGCTGGTGTGCGAGAGCATCTCGGAGGCGCAGCAGCGGGAGATCCAGCTCTGCCTCAGGAGGAGGATCGACAAGTGCGTCGAGTGGCTGCCCTACAAGTCCTCCTTCAGATACGTTGTACATAGGGACCTGGCCGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB635107             [GGACATCATTCTGAAGGCTGCGTATAATGTTGGTGGGCAGTCAGTAAACGCTCAAATAATCCAGAACTCAATTCTTGGATGCCAATCCCATCGTCCTTCGCTGTGGGTTCGGGCGCTGTTCGCACCAACGAAGAGATCCATGGCAGGGACAGCCAGGCATCCATATGCCCTTCAGCATCCAGAGCCAGTTGCTCATTTTGCCCTCTCCACTGGAGCATTTTCAGATCCACCTGTAAGCCACCACTTCCAGCCATACTTCAATCAAGAAATTTTTACGGTCTTCGAGTAGGTACCATATTTTTCTATCGCAAAATTTGGTACTACCCAAGGTACTACTACAAGTACAAGGTAGTACCAGATTCAACGCTAGAAAAAGCTGTACTTCCTGTACCTCTCAAGGACGGTAAAAAATGACTCCAAACATCCATGTAAAAAAAAAAGGAAATATCAAAGCTGTAAGTTGGATCTTGTGTTTGTAGGTGAGGCTGTACAGTGCGAAGAAGATACACCAGCAGCTGGAGGTGGCGAGGACGGAGTTCATCCAGGCGAACGTGGTGGCGAGGAGGCAGGCGCTGATGCTGCCCAAGGTGCTGCACTACTACGCCAAGGACGCGGCGCTGGAGCTGCGGCATGTGGTGGAGCTGGTGTGCGAGAGCATCTCGGAGGCGCAGCAGCGGGAGATCCAGCTCTGCCTCAGGAGGAGGATCGACAAGTGCGTCGAGTGGCTGCCCTACAAGTCCTCCTTCAGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB634134             [                                                                                                                                                                                                                                                                                                                                                                                                                              CTCCAAACATCCATGTAAAAAAAAAAGGAAATATCAAAGCTGTAAGTTGGATCTTGTGTTTGTAGGTGAGGCTGTACAGTGCGAAGAAGATACACCAGCAGCTGGAGGTGGCGAGGACGGAGTTCATCCAGGCGAACGTGGTGGCGAGGAGGCAGGCGCTGATGCTGCCCAAGGTGCTGCACTACTACGCCAAGGACGCGGCGCTGGAGCTGCGGCATGTGGTGGAGCTGGTGTGCGAGAGCATCTCGGAGGCGCAGCAGCGGGAGATCCAGCTCTGCCTCAGGAGGAGGATCGACAAGTGCGTCGAGTGGCTGCCCTACAAGTCCTCCTTCAGATACGTTGTACATAGGGACCTGGCCGAGTAGGCATGCAGCAAAAAAGGATTTGGGTTCGTTTTATTCTTCTTCTTCTTCTTTTCTTTGTTTTCTTTTCTTTTTTGTTTGAAATTCAAATTTCAAATTGCGGTTTGGATGTGCAGTGCTGTCTCGTTGTGGTGTAAGTAAAAGAACAGATTTTTGGTGAGGGCAATGGCGTGGGTTGGGTTTGTAATGGATTTTGCGTTGTGTGTGTATGTGTGTGTAAATATAGGTGATTTGTGAGTTGTGATGCTAATAGTATGGCAGTGTCGACAACTCGACAATAAAGGGGAGAAATATTGGTAACTTTGTCACAGTTCGATTTTGTCACGAGTGCCAAAACTTTCGCCACAAAGTGAGAGTATGACATGTTGAACATGTATTCTTAGCTTAACTTCCAGAACAGTATGGCATGTTGAATCATGTGCTTAATAAAGTGTAGCTTGTCTTAAAAAAAAAAAGGA]
[-] EMBL CB635108             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGTTGGATCTTGTGTTTGTAGGTGAGGCTGTACAGTGCGAAGAAGATACACCAGCAGCTGGAGGTGGCGAGGACGGAGTTCATCCAGGCGAACGTGGTGGCGAGGAGGCAGGCGCTGATGCTGCCCAAGGTGCTGCACTACTACGCCAAGGACGCGGCGCTGGAGCTGCGGCATGTGGTGGAGCTGGTGTGCGAGAGCATCTCGGAGGCGCAGCAGCGGGAGATCCAGCTCTGCCTCAGGAGGAGGATCGACAAGTGCGTCGAGTGGCTGCCCTACAAGTCCTCCTTCAGATACGTTGTACATAGGGACCTGGCCGAGTAGGCATGCAGCAAAAAAGGATTTGGGTTCGTTTTATTCTTCTTCTTCTTCTTTTCTTTGTTTTCTTTTCTTTTTTGTTTGAAATTCAAATTTCAAATTGCGGTTTGGATGTGCAGTGCTGTCTCGTTGTGGTGTAAGTAAAAGAACAGATTTCTGGTGAGGGCAATGGCGTGGGTTGGGTTTGTAATGGATTTTGCGTTGTGTGTGTATGTGTGTGTAAATATAGGTGATTTGTGAGTTGTGATGCTAATAGTATGGCAGTGTCGACAACTCGACAATAAAGGGGAGAAATATTGGTAACTTTGTCACAGTTCGATTTTGTCACGAGTGCCAAAACTTTCGCCACAAAGTGAGAGTATGACATGTTGAACATGTATTCTTAGCTTAACTTCCAGAACAGTATGGCATGTTGAATCAGGTGCTTAATAAAGTGTA                       ]




>consensus_12080#1
GGACACGATTCTGAAGGCTGCGTATAATGTTGGTGGGCAGTCAGTAAACGCTCAAATAAT
CCAGAACTCAATTCTTGGATGCCAATCCCATCGTCCTTCGCTGTGGGTTCGGGCGCTGTT
CGCACCAACGAAGAGATCCATGGCAGGGACAGCCAGGCATCCATATGCCCTTCAGCATCC
AGAGCCAGTTGCTCATTTTGCCCTCTCCACTGGAGCATTTTCAGATCCACCTGTAAGCCA
CCACTTCCAGCCATACTTCAATCAAGAAATTTTTACGGTCTTCGAGTAGGTACCATATTT
TTCTATCGCAAAATTTGGTACTACCCAAGGTACTACTACAAGTACAAGGTAGTACCAGAT
TCAACGCTAGAAAAAGCTGTACTTCCTGTACCTCTCAAGGACGGTAAAAAATGACTCCAA
ACATCCATGTAAAAAAAAAAGGAAATATCAAAGCTGTAAGTTGGATCTTGTGTTTGTAGG
TGAGGCTGTACAGTGCGAAGAAGATACACCAGCAGCTGGAGGTGGCGAGGACGGAGTTCA
TCCAGGCGAACGTGGTGGCGAGGAGGCAGGCGCTGATGCTGCCCAAGGTGCTGCACTACT
ACGCCAAGGACGCGGCGCTGGAGCTGCGGCATGTGGTGGAGCTGGTGTGCGAGAGCATCT
CGGAGGCGCAGCAGCGGGAGATCCAGCTCTGCCTCAGGAGGAGGATCGACAAGTGCGTCG
AGTGGCTGCCCTACAAGTCCTCCTTCAGATACGTTGTACATAGGGACCTGGCCGAGTAGG
CATGCAGCAAAAAAGGATTTGGGTTCGTTTTATTCTTCTTCTTCTTCTTTTCTTTGTTTT
CTTTTCTTTTTTGTTTGAAATTCAAATTTCAAATTGCGGTTTGGATGTGCAGTGCTGTCT
CGTTGTGGTGTAAGTAAAAGAACAGATTTTTGGTGAGGGCAATGGCGTGGGTTGGGTTTG
TAATGGATTTTGCGTTGTGTGTGTATGTGTGTGTAAATATAGGTGATTTGTGAGTTGTGA
TGCTAATAGTATGGCAGTGTCGACAACTCGACAATAAAGGGGAGAAATATTGGTAACTTT
GTCACAGTTCGATTTTGTCACGAGTGCCAAAACTTTCGCCACAAAGTGAGAGTATGACAT
GTTGAACATGTATTCTTAGCTTAACTTCCAGAACAGTATGGCATGTTGAATCATGTGCTT
AATAAAGTGTAGCTTGTCTTAAAAAAAAAAAGGA

consensusID : consensus_12080#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 375
fasta sequence

                              [CTCCTCGCCACCACGTTCGCCTGGATGAACTCCGTCCTCGCCACCTCCAGCTGCTGGTGTATCTTCTTCGCACTGTACAGCCTCACCTACAAACACAAGATCCAACTTACAGCTTTGATATTTCCTTTTTTTTTTACATGGATGTTTGGAGTCATTTTTTACCGTCCTTGAGAGGTACAGGAAGTACAGCTTTTTCCTTGAGAGGTACAGGAAGTACAGCTTTTTCTAGCGTTGAATCTGGTACTACCTTGTACTTGTAGTAGTACCTTGGGTAGTACCAAATTTTGCGATAGAAAAATATGGTACCTACTCGAAGACCGTAAAAATTTCTTGATTGAAGTATGGCTGGAAGTGGTGGCTTACAGGTGGATCTGA]

[+] EMBL CA752974             [CTCCTCGCCACCACGTTCGCCTGGATGAACTCCGTCCTCGCCACCTCCAGCTGCTGGTGTATCTTCTTCGCACTGTACAGCCTCACCTACAAACACAAGATCCAACTTACAGCTTTGATATTTCCTTTTTTTTTTACATGGATGTTTGGAGTCATTTTTTACCGTCCTTGAGAGGTACAGGAAGTACAGCTTTTTCCTTGAGAGGTACAGGAAGTACAGCTTTTTCTAGCGTTGAATCTGGTACTACCTTGTACTTGTAGTAGTACCTTGGGTAGTACCAAATTTTGCGATAGAAAAATATGGTACCTACTCGAAGACCGTAAAAATTTCTTGATTGAAGTATGGCTGGAAGTGGTGGCTTACAGGTGGATCTGA]




>consensus_12080#2
CTCCTCGCCACCACGTTCGCCTGGATGAACTCCGTCCTCGCCACCTCCAGCTGCTGGTGT
ATCTTCTTCGCACTGTACAGCCTCACCTACAAACACAAGATCCAACTTACAGCTTTGATA
TTTCCTTTTTTTTTTACATGGATGTTTGGAGTCATTTTTTACCGTCCTTGAGAGGTACAG
GAAGTACAGCTTTTTCCTTGAGAGGTACAGGAAGTACAGCTTTTTCTAGCGTTGAATCTG
GTACTACCTTGTACTTGTAGTAGTACCTTGGGTAGTACCAAATTTTGCGATAGAAAAATA
TGGTACCTACTCGAAGACCGTAAAAATTTCTTGATTGAAGTATGGCTGGAAGTGGTGGCT
TACAGGTGGATCTGA

consensusID : consensus_12080#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 347
fasta sequence

                              [ACAACGCAATCTTGTGCACCGTTTTCGCAGTGGGTTCGGGCGCTGTTCGCACCAACGAAGAGATCCATGGCAGGGACAGCCAGGCATCCATATGCCCTTCAGCATCCAGAGCCAGTTGCTCATTTTGCCCTCTCCACTGGAGCATTTTCAGATCCACCTGTAAGCCACCACTTCCAGCCATACTTCAATCAAGAAATTTTTACGGTCTTCGAGTAGGTACCATATTTTTCTATCGCAAAATTTGGTACTACCCAAGGTACTACTACAAGTACAAGGTAGTACCAGATTCAACGCTAGAAAAAGCTGTACTTCCTGTACCTCTCAAGGACGGTAAAAAATGACTCCAA]

[+] EMBL CB632638             [ACAACGCAATCTTGTGCACCGTTTTCGCAGTGGGTTCGGGCGCTGTTCGCACCAACGAAGAGATCCATGGCAGGGACAGCCAGGCATCCATATGCCCTTCAGCATCCAGAGCCAGTTGCTCATTTTGCCCTCTCCACTGGAGCATTTTCAGATCCACCTGTAAGCCACCACTTCCAGCCATACTTCAATCAAGAAATTTTTACGGTCTTCGAGTAGGTACCATATTTTTCTATCGCAAAATTTGGTACTACCCAAGGTACTACTACAAGTACAAGGTAGTACCAGATTCAACGCTAGAAAAAGCTGTACTTCCTGTACCTCTCAAGGACGGTAAAAAATGACTCCAA]
[+] EMBL CB634285             [ACAACGGAATCTTGTGCACCGTTTTCGCAGTGGGTTCGGGCGCTGTTCGCACCAACGAAGAGATCCATGGCAGGGACAGCCAGGCATCCATATGCCCTTCAGCATCCAGAGCCAGTTGCTCATTTTGCCCTCTCCACTGGAGCATTTTCAGATCCACCTGTAAGCCACCACTTCCAGCCATACTTCAATCAAGAAATTTTTACGGTCTTCGAGTAGGTACCATATTTTTCTATCGCAAAATTTGGTACTACCCAAGGTACTACTACAAGTACAAGGTAGTACCAGATTCAACGCTAGAAAAAGCTGTACTTCCTGTACCTCTCAAGGACGGTAAAAAATGACTCCAA]




>consensus_12080#3
ACAACGCAATCTTGTGCACCGTTTTCGCAGTGGGTTCGGGCGCTGTTCGCACCAACGAAG
AGATCCATGGCAGGGACAGCCAGGCATCCATATGCCCTTCAGCATCCAGAGCCAGTTGCT
CATTTTGCCCTCTCCACTGGAGCATTTTCAGATCCACCTGTAAGCCACCACTTCCAGCCA
TACTTCAATCAAGAAATTTTTACGGTCTTCGAGTAGGTACCATATTTTTCTATCGCAAAA
TTTGGTACTACCCAAGGTACTACTACAAGTACAAGGTAGTACCAGATTCAACGCTAGAAA
AAGCTGTACTTCCTGTACCTCTCAAGGACGGTAAAAAATGACTCCAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12080#0      TTCCTCCTCTCCTCTCTCCCTGCTTCTGATGCTGCTGTCCCAACTGTAGCAGTAGCCACC 60
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      ACCTTCTCCATCTCGTCGGCTCTGATTAGATTTCTTGATGTCGTGTTAGCCTTTCCCTGT 120
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      TCCTTTAGCTAAAGAATTTAACGGCAGTGGGGCAGAGACGGATTGATGCCATTGTTCGAT 180
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      TCTTTCTCCTCCTTTTGCTTCCTTTTAAGCATTGCTTTTCCTGGCCATCCTTTTCCATTC 240
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      CCATTTGTTTTGTAGGCTAGCTGCCATAGCCTTTTTCTCGTCTTCCAGGGCTAGTATCTC 300
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      AGTATCTCCACTTGCTTCTCATTCTTATAATCGTCGTCGTCGTCTTCCTCTGTGATCTGT 360
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      GGTTGCCTTCTCTGCTTCGCCTCCATTTCTGTTCTTGGCTGCTTGTTCTTCTTCTTGGGC 420
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      GTTGTTAGCCAAGAAAGCGAATTCGTTTCTTTTTTTCTTGAGCGATTTGAGCTCGGTTCT 480
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      TTCTGCTTTGGACAGCGATTGAGTGAATGAGTGAGTGAGTGAGTGAACTCATGGCCTTTC 540
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      CTGCTTTCTTCATGGACAGCTCACTCTGCACAGCTCAAGGTTCTTGCTGAGTGAAGCAGA 600
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      GAACTTTAGCTGCTGCCGCCATGGATAGGGCGTCAAGATCAGGTGTTCTTTCAGAGACGG 660
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      CTTCTTTCGCCGACACTCCGAGGTCCATCTATTCGTCCTGCAATCTCCAGCATCTTCAGT 720
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      CACAGAGTATCCGGAAGATACATGAAGGTGCCTTGGATATATCGCCACGATTCTCCTACT 780
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      GCAACCCTAATGCTAGTCAGGACAAGATACTGCACAGAAGATTCTCACTTAACTTGCCAG 840
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      AGCATATGCCAGGCCATTACTCCAGGACAGTAACTGAAAGAAATCAAAAGGCTGCTTCAA 900
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      AGTCCATCACAGATCTAGTCGTGGAGATTGCGGCCCTTGAGCAGGAAGTCGTCCGAAAGG 960
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      AATTGCATCTGCTATCCCTCTATAGAAAAGCATTTGATCAGTATTTATCGGAGTCTGGCA 1020
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      GTGTTACGAGTGAGGTGGATCAAGAATTGCTGAAAAACATTGACGAGGGTGCCCTTCGTT 1080
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      TGAAAGACATCAAGCAATCTGCAGCCTTCAACTTACCAATAGTCTCAGATACTAAAAGTG 1140
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      AGGTATCAAGATCACCTTCAAGGCATTCCAGCCTTGTTAACTTCTTGAGTGCATCTATTT 1200
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      CTGAATATGTACCCAAGATCTCTTGCAAACTATCAGAAGACATTCTGAGCTGCATAGCTG 1260
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      CTGTCTACTGTAAACTCGGAAGCGTGCCACTGCAAGATAGCGAATACATAACCTCCCCCA 1320
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      GTCCTTCTGTTTCATCTTCAAGTACTTTTTCTCCGAGGAACCGCAATGATAGCTGGAGCC 1380
consensus_12080#1      ------------------------------------------------------------
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      CTCGGTACAACTTCGATATCACCCCGAGCCCTCGCCAATATGGATACGAGAAAGAGAATA 1440
consensus_12080#1      -----------------------------------------GGACACGATTCTGAAGGCT 19
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      ATGAACAAAAGAACATAGGCA--TGATAATTGTCCCAAGGATACGAATAGATGCTGACAA 1498
consensus_12080#1      GCGTATAAT-GTTGGTGGGCAGTCAGTAAACGCTCAAATAATCCAGA-----ACTCAATT 73
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      GTTTGATTACGCCTCAAAAATGCTTGAGACTATCAGGTCCCTGATTCAACGGCTTGAAAA 1558
consensus_12080#1      CTTGGATGCCAATCCCATCGTCCTTC--GCTGT-GGGTTCGGGCGCTGTTCGCACCAACG 130
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      AATTGACCCAACAAAGATGACACACGAGGAGCAACTCTGCTTTTGGATTAACATCCACAA 1618
consensus_12080#1      AAGAGATCCATGGCAGG-GACAGCCAGGCATCCA-TATGCCCTT----CAGCATCCAGAG 184
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      TGCTTTAGTCATGCATGCATTTTTGGCCTACGGGCTGCACGATAAACGCATGAAAAGCAC 1678
consensus_12080#1      CCAGTTGCTCAT-TTTGCCCTCTCCACTGGAGCATTTTCAGATC--CACCTGTAAGCCAC 241
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      GGACATGATTCTGAAGGCTG-CGTATAATGTTGGTGGGCAGTCAGTAAACGCTCAAATAA 1737
consensus_12080#1      CACTTCCAGCCATACTTCAATCAAGAAATTTTTACGGTCTTCGAGTAGGTACCATATTTT 301
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      TCCAGAACTCAATTCTTGGATGCCAATCCCATCGTCCTTCGCTGTGGGTTCGGGCGCTGT 1797
consensus_12080#1      TCTATCGCAAAATTTGGTACTACCCAAGGTACTA-CTACAAGTACAAGGTAGTACCAGAT 360
consensus_12080#3      ---ACAACGCAATCTTGTG----------CACCG-TTTTCGCAGTGGGTTCGGGCGCTGT 46
consensus_12080#2      ------------CTCCTCG---------CCACCA-CGTTCGCC-TGGAT--GAACTCCGT 35
                                                     *                    *  *    *

consensus_12080#0      TCGCACCAACGAAGAGATCCATGGCAGGGACAGCCAGGCATCCATA-----TGCCCTTCA 1852
consensus_12080#1      TCAACGCTAGAAAAAGCTGTACTTCCTGTACCTCTCAAGGACGGTAAAAAATGACTCCAA 420
consensus_12080#3      TCGCACCAACGAAGAGATCCATGGCAGGGACAGCCAGGCATCCATA-----TGCCCTTCA 101
consensus_12080#2      CCTCGCCACCTCCAG---CTGCTGGTGTATCTTCTTCGCA-CTGTACAGCCTCACCTACA 91
                        *    *                       *  *       *  **     *  *    *

consensus_12080#0      GCATCCA-GAGCCAGTTGCTCATTTTGCCCTCTCCACTGGAGCATTTTCAGATCCACCT- 1910
consensus_12080#1      ACATCCATGTAAAAAAAAAAGGAAATATCAAAGCTGTAAGTTGGATCTTGTGTTTGTAG- 479
consensus_12080#3      GCATCCA-GAGCCAGTTGCTCATTTTGCCCTCTCCACTGGAGCATTTTCAGATCCACCT- 159
consensus_12080#2      A-ACACAAGATCCAACTTACAGCTTTGATATTTCCTTTTTTTTTTACATGGATGTTTGGA 150
                         *  ** *    *           *       *                  *       

consensus_12080#0      GTGAGGCTGTACAGTGCGAAGAAGATACACCAGCAGCTGGAGGTGGCGAGGACGGAGTTC 1970
consensus_12080#1      GTGAGGCTGTACAGTGCGAAGAAGATACACCAGCAGCTGGAGGTGGCGAGGACGGAGTTC 539
consensus_12080#3      GTAAGCCACCACTTCC------AGCCATACTTCAATCAAGAAATTTTT---ACGGTCTTC 210
consensus_12080#2      GTCATTTTTTACCGTCCTTGAGAGGTACA---GGAAGTACAGCTTTTTCCTTGAGAG--- 204
                       ** *      **          **  * *     *     *  *          *     

consensus_12080#0      ATCCAGGCGAACGTGGTGGCGAGGAGGCAGGCGCTGATGCTGCCCAAGGTGCTGCACTAC 2030
consensus_12080#1      ATCCAGGCGAACGTGGTGGCGAGGAGGCAGGCGCTGATGCTGCCCAAGGTGCTGCACTAC 599
consensus_12080#3      GAGTAGGT--ACCATATTTTTCTATCGCAAAATTTGGTACTACCCAAGGT-----ACTAC 263
consensus_12080#2      GTACAGGAAGTACAGCTTTTTCTAGCGTTGAATCTGGTACTACCTTGTAC-TTGTAGTAG 263
                           ***         *         *       ** * ** **           * ** 

consensus_12080#0      TACGCCAAGGACGCGGCGCTGGAGCTGCGGCATGTGGTGGAGCTGGTGTGCGAGAGCATC 2090
consensus_12080#1      TACGCCAAGGACGCGGCGCTGGAGCTGCGGCATGTGGTGGAGCTGGTGTGCGAGAGCATC 659
consensus_12080#3      TACAAGTACAAGGTAGTACCAGA--TTCAACGCTAGAAAAAGCTGTACTTCCTGTACCTC 321
consensus_12080#2      TACCTTGG----GTAGTACCAAA--TTTTGCGATAGAAAAATATGGTAC-------CTAC 310
                       ***         *  *  *   *  *    *    *    *  **           *  *

consensus_12080#0      TCGGAGGCGCAGCAGCGGGA--GATCCAGCTCTGCCTCAGGAGGAGGATCGACAAGTGCG 2148
consensus_12080#1      TCGGAGGCGCAGCAGCGGGA--GATCCAGCTCTGCCTCAGGAGGAGGATCGACAAGTGCG 717
consensus_12080#3      TCAAGGACGGTAAAAAATGA--C-TCCAA------------------------------- 347
consensus_12080#2      TCGAAGACCGTAAAAATTTCTTGATTGAAGTATGGCTGGAAGTGGTGGCTTACAGGTGGA 370
                       **   * *     *          *  *                                

consensus_12080#0      TCGAGTGGCTGCCCTACAAGTCCTCCTTCAGATACGTTGTACATAGGGACCTGGCCGAGT 2208
consensus_12080#1      TCGAGTGGCTGCCCTACAAGTCCTCCTTCAGATACGTTGTACATAGGGACCTGGCCGAGT 777
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      TCTGA------------------------------------------------------- 375
                                                                                   

consensus_12080#0      AGGCATGCAGCAAAAAAGGATTTGGGTTCGTTTTATTCTTCTTCTTCTTCTTTTCTTTGT 2268
consensus_12080#1      AGGCATGCAGCAAAAAAGGATTTGGGTTCGTTTTATTCTTCTTCTTCTTCTTTTCTTTGT 837
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      TTTCTTTTCTTTTTTGTTTGAAATTCAAATTTCAAATTGCGGTTTGGATGTGCAGTGCTG 2328
consensus_12080#1      TTTCTTTTCTTTTTTGTTTGAAATTCAAATTTCAAATTGCGGTTTGGATGTGCAGTGCTG 897
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      TCTCGTTGTGGTGTAAGTAAAAGAACGGATTTCTGGTGAGGGCAATGGCGTGGGTTGGGT 2388
consensus_12080#1      TCTCGTTGTGGTGTAAGTAAAAGAACAGATTTTTGGTGAGGGCAATGGCGTGGGTTGGGT 957
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      TTGTAATGGATTTTGCGTTGTGTGTGTATGTGTGTGTAAATATAGGTGATTTGTGAGTTG 2448
consensus_12080#1      TTGTAATGGATTTTGCGTTGTGTGTGTATGTGTGTGTAAATATAGGTGATTTGTGAGTTG 1017
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      TGATGCTAATAGTATGGCAGTGTCGACAACTCGACAATAAAGGGGAGAAATATTGGTAAC 2508
consensus_12080#1      TGATGCTAATAGTATGGCAGTGTCGACAACTCGACAATAAAGGGGAGAAATATTGGTAAC 1077
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      TTTGTCACAGTTCGATTTTGTCACGAGTGCCAAAACTTTCGCCACAAAGTGAGAGTATGA 2568
consensus_12080#1      TTTGTCACAGTTCGATTTTGTCACGAGTGCCAAAACTTTCGCCACAAAGTGAGAGTATGA 1137
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      CATGTTGAACATGTATTCTTAGCTTAACTTCCAGAACAGTATGGCATGTTGAATCATGTG 2628
consensus_12080#1      CATGTTGAACATGTATTCTTAGCTTAACTTCCAGAACAGTATGGCATGTTGAATCATGTG 1197
consensus_12080#3      ------------------------------------------------------------
consensus_12080#2      ------------------------------------------------------------
                                                                                   

consensus_12080#0      CTTAGTAAAGTGTAGCTTGTCTTAGCTTAAAAAAAAAAAAAAAAGG 2674
consensus_12080#1      CTTAATAAAGTGTAGCTTGTCTTA----AAAAAAAAAAGGA----- 1234
consensus_12080#3      ----------------------------------------------
consensus_12080#2      ----------------------------------------------