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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12084#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1663 fasta sequence
[ACTTTTCTAAGGGAAAGTAGCCGGTGGTAACGGTGAACAAGTTTTAAGCAGAGATGTGTACCGCTCTGGGGCAGCTGTTTGACTTCTTTAGGATGCTTACTTTCTTTTTCACCACAGTTGGTTATTATGTCTGCACAATGATGACCGTTTCTAACTGTGTATATCTTTTTGTATGGAAGGGTTTATCTGGCACTCTCTGGGCTCGACTATGAAATATCTCGTCAATTTAGGTTTCTGGGAAACACTGCACTCGACGCTGCTTTGAACGCTCAATTTTTGGTCCAGATTGGTATTTTTACTGCAGTACCGATGATAATGGGTTTCATTTTGGAACTGGGGCTACTGAAGGCTATTTTCAGATTTATTACAATGCAACTGCATTTCTGCTCAGTGTTTTTCACATTCTCTCTTGGAACTATAACACATTATTTTGGGAGAACAATACTTCATGGTGGTGCAAAGTATCATGCTACTGGTAGAGGTTTTGTTGTTCGTCACATAAAATTTGCCGAAAATTATCGGCTCTATTCTCGAAGCCACTTTGTGAAAGCGCTTGAAGTTGCTCTCCTCCTCATTATCTACATTGCATATGGTTATACAAGGGGCGGTTCATCTTCCTTTATTCTATTAACTATCAGTAGTTGGTTCCTCGTCGTGTCCTGGCTCTTCGCACCATACATTTTCAACCCTTCTGGTTTCGAGTGGCAAAAGACTGTTGAGGACTTTGATGACTGGACAAATTGGTTACTTTATAAAGGTGGAGTTGGTGTAAAGGGGGAAAACAGCTGGGAATCTTGGTGGGATGAGGAGCAAGCCCACATCCAGACATTAAGAGGACGTATCCTAGAGACTATCCTAAGCCTCAGATTTCTTATTTTCCAATATGGCATTGTTTATAAGCTCAAAATTGCTTCACACAATACATCTCTTGCGGTTTATGGCTTCTCATGGATTGTACTTCTCGTTTTGGTGCTCCTATTTAAGCTTTTTACTGCAACTCCGAAGAAGTCAACCGCCTTGCCAACTTTTGTTCGGTTTCTACAGGGCCTCCTTGCGATTGGAATGATTGCAGGAATTGCTCTACTTATTGCATTGACAAAGTTTACAATTGCTGATCTATTTGCAAGTGCGCTTGCTTTTGTAGCAACTGGATGGTGTGTTCTATGTCTGGCTGTCACATGGAAGCGCCTCGTGAAATTCGTTGGGCTCTGGGACTCAGTCCGTGAGATTGCTCGGATGTATGATGCCGGAATGGGTGCTCTCATCTTTGTGCCCATTGTGTTCTTTTC-ATGGTTC-CCCTTCGTA-TCCACCTTC-CAGTCACGTTTCCTGTTTAAT-CAAGCTTTCAGCCGTGGTCTGGAGATCTCCCTCATCTTGGCAGGAAACAAGGCAAATCAGGAGGCATGAAAAGCCTAACCACCTAACCGCCTGGATATTTTTGTTGTATATTCTTGGAA-TTGATT-AG-TGGTACTTGATTTGAACAACACCTTTGTACATAACTG-CCTG-CCA-TTTTAGGAGCAAATTATGTATCCAAACTAA-CAGTG-CCATGCCAGTTTAGATGTGAGTATTCATCTCTTGTTTGTAGCCGTAACGACCTGTAATTTGAACATTCCGGT-AATTTGGATGCGACAATTCAGATAGCCTGATTGCTGTATTTGAGCAAAAA]
[+] EMBL CB684140 [ACTTTTCTAAGGGAAAGTAGCCGGTGGTAACGGTGAACAAGTTTTAAGCAGAGATGTGTACCGCTCTGGGGCAGCTGTTTGACTTCTTTAGGATGCTTACTTTCTTTTTCACCACAGTTGGTTATTATGTCTGCACAATGATGACCGTTTCTAACTGTGTATATCTTTTTGTATGGAAGGGTTTATCTGGCACTCTCTGGGCTCGACTATGAAATATCTCGTCAATTTAGGTTTCTGGGAAACACTGCACTCGACGCTGCTTTGAACGCTCAATTTTTGGTCCAGATTGGTATTTTTACTGCAGTACCGATGATAATGGGTTTCATTTTGGAACTGGGGCTACTGAAGGCTATTTTCAGATTTATTACAATGCAACTGCATTTCTGCTCAGTGTTTTTCACATTCTCTCTTGGAACTATAACACATTATTTTGGGAGAACAATACTTCATGGTGGTGCAAAGTATCATGCTACTGGTACAGGTTTTGTTGTTCGTCACATAAAATTTGCCGAAAATTATCGGCTCTATTCTCGAAGCCACTTTGTGAAAGCGCTTGAAGTTGCTCTCCTCCTCATTATCTACATTGCATATGGTTATACAAGGGGCGGGTCATCTTCCTTTATTCTATTAACTATCAGTATTTGGTTCCTCATCGTGTCCTGTCTCTTCACACCATACATTTTCAACCCTT ]
[+] EMBL AK071856 [ CTGCACTCGACGCTGCTTTGAACGCTCAATTTTTGGTCCAGATTGGTATTTTTACTGCAGTACCGATGATAATGGGTTTCATTTTGGAACTGGGGCTACTGAAGGCTATTTTCAGTTTTATTACAATGCAACTGCAGTTCTGCTCAGTGTTTTTCACATTCTCTCTTGGAACTAGAACACATTATTTTGGGAGAACAATACTTCATGGTGGTGCAAAGTATCATGCTACTGGTAGAGGTTTTGTTGTTCGTCACATAAAATTTGCCGAAAATTATCGGCTCTATTCTCGAACCCACTTTGTGAAAGCGCTTGAAGTTGCTCTCCTCCTCATTATCTACATTGCATATGGTTATACAAGGGGCGGTTCATCTTCCTTTATTCTATTAACTATCAGTAGTTGGTTCCTCGTCGTGTCCTGGCTCTTCGCACCATACATTTTCAACCCTTCTGGTTTCGAGTGGCAAAAGACTGTTGAGGACTTTGATGACTGGACAAATTGGTTACTTTATAAAGGTGGAGTTGGTGTAAAGGGGGAAAACAGCTGGGAATCTTGGTGGGATGAGGAGCAAGCCCACATCCAGACATTAAGAGGACGTATCCTAGAGACTATCCTAAGCCTCAGATTTCTTATTTTCCAATATGGCATTGTTTATAAGCTCAAAATTGCTTCACACAATACATCTCTTGCGGTTTATGGCTTCTCATGGATTGTACTTCTCGTTTTGGTGCTCCTATTTAAGCTTTTTACTGCAACTCCGAAGAAGTCAACCGCCTTGCCAACTTTTGTTCGGTTTCTACAGGGCCTCCTTGCGATTGGAATGATTGCAGGAATTGCTCTACTTATTGCATTGACAAAGTTTACAATTGCTGATCTATTTGCAAGTGCGCTTGCTTTTGTAGCAACTGGATGGTGTGTTCTATGTCTGGCTGTCACATGGAAGCGCCTCGTGAAATTCGTTGGGCTCTGGGACTCAGTCCGTGAGATTGCTCGGATGTATGATGCCGGAATGGGTGCTCTCATCTTTGTGCCCATTGTGTTCTTTTC ATGGTTC CCCTTCGTA TCCACCTTC CAGTCACGTTTCCTGTTTAAT CAAGCTTTCAGCCGTGGTCTGGAGATCTCCCTCATCTTGGCAGGAAACAAGGCAAATCAGGAGGCATGAAAAGCCTAACCACCTAACCGCCTGGATATTTTTGTTGTATATTCTTGGAA TTGATT AG TGGTACTTGATTTGAACAACACCTTTGTACATAACTG CCTG CCA TTTTAGGAGCAAATTATGTATCCAAACTAA CAGTG CCATGCCAGTTTAGATGTGAGTATTCATCTCTTGTTTGTAGCCGTAACGACCTGTAATTTGAACATTCCGGT AATTTGGATGC ]
[+] EMBL AK059569 [ TTTGGGAGAACAATACTTCATGGTGGTGCAAAGTATCATGCTACTGGTAGAGGTTTTGTTGTTCGTCACATAAAATTTGCCGAAAATTATCGGCTCTATTCTCGAAGCCACTTTGTGAAAGCGCTTGAAGTTGCTCTCCTCCTCATTATCTACATTGCATATGGTTATACAAGGGGCGGTTCATCTTCCTTTATTCTATTAACTATCAGTAGTTGGTTCCTCGTCGTGTCCTGGCTCTTCGCACCATACATTTTCAACCCTTCTGGTTTCGAGTGGCAAAAGACTGTTGAGGACTTTGATGACTGGACAAATTGGTTACTTTATAAAGGTGGAGTTGGTGTAAAGGGGGAAAACAGCTGGGAATCTTGGTGGGATGAGGAGCAAGCCCACATCCAGACATTAAGAGGACGTATCCTAGAGACTATCCTAAGCCTCAGATTTCTTATTTTCCAATATGGCATTGTTTATAAGCTCAAAATTGCTTCACACAATACATCTCTTGCGGTTTATGGCTTCTCATGGATTGTACTTCTCGTTTTGGTGCTCCTATTTAAGCTTTTTACTGCAACTCCGAAGAAGTCAACCGCCTTGCCAACTTTTGTTCGGTTTCTACAGGGCCTCCTTGCGATTGGAATGATTGCAGGAATTGCTCTACTTATTGCATTGACAAAGTTTACAATTGCTGATCTATTTGCAAGTGCGCTTGCTTTTGTAGCAACTGGATGGTGTGTTCTATGTCTGGCTGTCACATGGAAGCGCCTCGTGAAATTCGTTGGGCTCTGGGACTCAGTCCGTGAGATTGCTCGGATGTATGATGCCGGAATGGGTGCTCTCATCTTTGTGCCCATTGTGTTCTTTTC ATGGTTC CCCTTCGTA TCCACCTTC CAGTCACGTTTCCTGTTTAAT CAAGCTTTCAGCCGTGGTCTGGAGATCTCCCTCATCTTGGCAGGAAACAAGGCAAATCAGGAGGCATGAAAAGCCTAACCACCTAACCGCCTGGATATTTTTGTTGTATATTCTTGGAA TTGATT AG TGGTACTTGATTTGAACAACACCTTTGTACATAACTG CCTG CCA TTTTAGGAGCAAATTATGTATCCAAACTAA CAGTG CCATGCCAGTTTAGATGTGAGTATTCATCTCTTGTTTGTAGCCGTAACGACCTGTAATTTGAACATTCCGGT AATTTGGATGCGACAATTCAGATAGCCTGATT ]
[+] EMBL BE230772 [ GCGGTTCATCTTCCTTTATTCTATTAACTATCAGTAGTTGGTTCCTCGTCGTGTCCTGGCTCTTCGCACCATACATTTTCAACCCTTCTGGTTTCGAGTGGCAAAAGACTGTTGAGGACTTTGATGACTGGACAAATTGGTTACTTTATAAAGGTGGAGTTGGTGTAAAGGGGGAAAACAGCTGGGAATCTTGGTGGGATGAGGAGCAAGCCCACATCCAGACATTAAGRGGACGTATCCTAGAGACTATCCTAAGCCTCAGATTTCTNATTTTCCAATATGGCATTGTTat ]
[-] EMBL CB684141 [ GGTGGAGTTGGTGTAAAGGGGGAAAACAGCTGGGAATCTTGGTGGGATGAGGAGCAAGCCCACATCCAGACATTAAGAGGACGTATCCTAGAGACTATCCTAAGCCTCAGATTTCTTATTTTCCAATATGGCATTGTTTATAAGCTCAAAATTGCTTCACACAATACATCTCTTGCGGTTTATGGCTTCTCATGGATTGTACTTCTCGTTTTGGTGCTCCTATTTAAGCTTTTTACTGCAACTCCGAAGAAGTCAACCGCCTTGCCAACTTTTGTTCGGTTTCTACAGGGCCTCCTTGCGATTGAAATGATTGCAGGAATTGCTCTACTTATTGCATTGACAAAGTTTACAATTGCTGATCTATTTGCAAGTGCGCTTGCTTTTGTAGCAACTGGATGGTGTGTTCTATGTCTGGCTGTCACATGGAAGCGCCTCGTGAAATTCGTTGGGCTCTGGGACTCAGTCCGTGAGATTGCTCGGATGTATGATGCCGGAATGGGTGCTCTCATCTTTGTGCCCATTGTGTTCTTTTC ATGGTTC CCCTTCGTA TCCACCTTC CAGTCACGTTTCCTGTTTAAT CAAGCTTTCAGCCGTGGTCTGGAGATCTCCCTCATCTTGGCAGGAAACAAGGCAAATCAGGAGGCATGAAAAGCCTAACCACCTAACCGCCTGGATATTTTTGTTGTATATTCTTGGAA TTGATT AG TGGTACTTGATTTGAACAACACCTTTGTACATAACTG CCTG CCA TTTTAGGAGCAAATGATGTATCCAAACTAA CAGTG CCAT ]
[+] EMBL AU174199 [ CCGTGAGATTGCTCGGATGTATGATGCCGGAATGGGTGCTCTCATCTTTGTGCCCATTGTGTTCTTTTC ATGGTTC CCCTTCGTA TCCACCTTC CAGTCACGTTTCCTGTTTAAT CAAGCTTTCAGCCGTGGTCTGGAGATCTCCCTCATCTTGGCAGGAAACAAGGCAAATCAGGAGGCATGAAAAGCCTAACCACCTAACCGCCTGGATATTTTTGTTGTATATTCTTGGAA TTGATT AG TGGTACTTGATTTGAACAACACCTTTGTACATAACTG CCTG CCA TTTTAGGAGCAAATTATGTATCCAAACTAA CAGTG CCATGCCAGTTTAGATGTGAGTATTCATCTCTTGTTTGTAGCCGTAACGACCTGTAATTTGAACATTCCGGT AATTTGGATGCGACAATTCAGATAGCCTGATTGCTGTATTTGAGCAAAAA]
[+] EMBL AU033035 [ tcntcTGTGCCTNTTGTGTTTTTNTCAATGGTTCNCCCTTCGTATTCCACCTTCACAGTCACGTTTCCTGTTTANTCCAAGCTTTCAGCCGTGGTCTGGAGATCTCCCTCATCTTGGCAGGANACAAGGCAAATCAGGAGGCNTGAAAAGCCTAACCACCTAACCGCCTGGATATTTTTGTTGNATATTCTTGGAA CTGATT AG TGGTACTTGATTTGAACAANACCTTTGTNCATNNCTG CCTG CCA TTTTAGGAGCAAATTATGTATCCAAACTAA CAGTG CNATGCCAGTTTAGATGTGAGTATTCATCTCTTGTTTGTAGCCGTAACGACCTGTAATTTGAACATTCCGGT AATTTGGATGCGACAATTCAGATAGCCTGATTGCTGTATTTGAGCAAAAA]
[+] EMBL BI807066 [ ATCTTGGCAGGAAACAAGGCAAATCAGGAGGCATGAAAAGCCTAACCACCTAACCGCCTGGATATTTTTGTTGTATATTCTTGGAATTTGATTAAGTTGGTAC TGATTTGAACCACACCTTTGTACATAACTGCCCTGCCCATTTTTAGGAGCAAATTATGTATCCAAACTAACCAGTGCCCATCCCAGTTTAGATGTGAGTATTCATCTCTTGTTTGTA CCGTAACGACCTGTAATTTGAACATTCCGGTAAATTTGGATGCG C ATTCAGATAGCCaaaaaaaaa ]
consensusID : consensus_12084#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 737 fasta sequence
[CAGTATATAAACCCTATATGGCTTATTGAGAACTAAACATTAGTTACGTCACTTGTGCATGCTTAGTAGTGTATCTCTTTCAAACTTGCTTGTATGTGTTATCTAATCTGCAGGATTCAATTCGACTCTGCGCCAGGGAAATATCACACACCATGAATATATCCAGGCTATCTGTTTAATATTTTTGCACTGCGAATGTGTATAACATGAATAATGTGCACTCATTATGATTTGTGTATGAGATTGGTCCTGAGGATTTTAAATATGCATGGTTTTGGAATATGGCATGTGCACTTGCATTTTTTTTGTTAGCATGTCTGGTACAGAGAATTAAGCGGCTTGGACGCGTATTACACATACATCAATATGGTCTTCCCTTTTCTTGGGCATGCAAATTAGCAAATGCACTTGAACAGATGAACTAAACTTTCTTACACTTTTGATTTATTTTTTTTTGGAAGTGCAGGTTAACATATTTGCGTAATGGGTGCATATGTCATCTTGTGTACACTTGCATTTTAAAATCAGTATATCTTTGTTATCATTTCCCAAAATAATAATCTAACAATCTATTTCACTTCTTTTAAGGNTGGGAAAGGACGAGATGTTGGTCTGAACCAAATAGCACTTTTCGAAGGGAAAGTAGCCCGGTGGTAACGGNGAACAAGTTTTAAGCAGAGATGTGTACCGTCTGGGGCAGCTGGTTGACTTCCTTTAGGATGCCTTACTTTTCTTTT]
[+] EMBL CA764969 [CAGTATATAAACCCTATATGGCTTATTGAGAACTAAACATTAGTTACGTCACTTGTGCATGCTTAGTAGTGTATCTCTTTCAAACTTGCTTGTATGTGTTATCTAATCTGCAGGATTCAATTCGACTCTGCGCCAGGGAAATATCACACACCATGAATATATCCAGGCTATCTGTTTAATATTTTTGCACTGCGAATGTGTATAACATGAATAATGTGCACTCATTATGATTTGTGTATGAGATTGGTCCTGAGGATTTTAAATATGCATGGTTTTGGAATATGGCATGTGCACTTGCATTTTTTTTGTTAGCATGTCTGGTACAGAGAATTAAGCGGCTTGGACGCGTATTACACATACATCAATATGGTCTTCCCTTTTCTTGGGCATGCAAATTAGCAAATGCACTTGAACAGATGAACTAAACTTTCTTACACTTTTGATTTATTTTTTTTTGGAAGTGCAGGTTAACATATTTGCGTAATGGGTGCATATGTCATCTTGTGTACACTTGCATTTTAAAATCAGTATATCTTTGTTATCATTTCCCAAAATAATAATCTAACAATCTATTTCACTTCTTTTAAGGNTGGGAAAGGACGAGATGTTGGTCTGAACCAAATAGCACTTTTCGAAGGGAAAGTAGCCCGGTGGTAACGGNGAACAAGTTTTAAGCAGAGATGTGTACCGTCTGGGGCAGCTGGTTGACTTCCTTTAGGATGCCTTACTTTTCTTTT]
consensusID : consensus_12084#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 588 fasta sequence
[ATTANCCNCTGCNAATTNGTNGGTTAANAGGCTCCTGGATGGAGANGCGGATGTTAATTATGGNATGACAAAGTTAACATTGNNGATNATTGGCAGGGGGGTGGTTTTGTANCAATGGGAGGNGTGTTNAATGTTGGCNGTCACATGGAGCGCTTGNGAAATTGGTTGGGTTTTGGGATCAGTCCGTGAGAAGTTCGGATGTATGATGCCGGAATGGTGCTCTCATCTTAGTGCCCATTGTGTTCTTTTCATGGTTCCCCTTCGTATCCACCTTCCAGTCACGTTTCCTGTTTAATCAAGCTTTCAGCCGTGGTCTGGAGATCTCCCTCATCTTGGCAGGAAACAAGGCAAATCAGGAGGCATGAAAAGCCTAACCACCTAACCGCCTGGATATTTTTGTTGTATATTCTTGGAATTGATTAGTGGTACTTGATTTGAACAACACCTTTGTACATAACTGCCTGCCATTTTAGGAGCAAATTATGTATCCAAACTAACAGTGCCATGCCAGTTTAGATGTGAGTATTCATCTCTTGTTTGTAGCCGTAACGACCTGTAATTTGAACATTCCGGTAATTTGGATGCGAC]
[-] EMBL BE229051 [ATTANCCNCTGCNAATTNGTNGGTTAANAGGCTCCTGGATGGAGANGCGGATGTTAATTATGGNATGACAAAGTTAACATTGNNGATNATTGGCAGGGGGGTGGTTTTGTANCAATGGGAGGNGTGTTNAATGTTGGCNGTCACATGGAGCGCTTGNGAAATTGGTTGGGTTTTGGGATCAGTCCGTGAGAAGTTCGGATGTATGATGCCGGAATGGTGCTCTCATCTTAGTGCCCATTGTGTTCTTTTCATGGTTCCCCTTCGTATCCACCTTCCAGTCACGTTTCCTGTTTAATCAAGCTTTCAGCCGTGGTCTGGAGATCTCCCTCATCTTGGCAGGAAACAAGGCAAATCAGGAGGCATGAAAAGCCTAACCACCTAACCGCCTGGATATTTTTGTTGTATATTCTTGGAATTGATTAGTGGTACTTGATTTGAACAACACCTTTGTACATAACTGCCTGCCATTTTAGGAGCAAATTATGTATCCAAACTAACAGTGCCATGCCAGTTTAGATGTGAGTATTCATCTCTTGTTTGTAGCCGTAACGACCTGTAATTTGAACATTCCGGTAATTTGGATGCGAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12084#0 ACTTTTCTAAGGGAAAGTAGCCGGTGGTAACGGTGAACAAGTTTTAAGCAGAGATGTGTA 60
consensus_12084#2 ------------------------------------------------------------
consensus_12084#1 ------------------------------------------------------------
consensus_12084#0 CCGCTCTGGGGCAGCTGTTTGACTTCTTTAGGATGCTTACTTTCTTTTTCACCACAGTTG 120
consensus_12084#2 ------------------------------------------------------------
consensus_12084#1 ------------------------------------------------------------
consensus_12084#0 GTTATTATGTCTGCACAATGATGACCGTTTCTAACTGTGTATATCTTTTTGTATGGAAGG 180
consensus_12084#2 ------------------------------------------------------------
consensus_12084#1 ------------------------------------------------------------
consensus_12084#0 GTTTATCTGGCACTCTCTGGGCTCGACTATGAAATATCTCGTCAATTTAGGTTTCTGGGA 240
consensus_12084#2 ------------------------------------------------------------
consensus_12084#1 ------------------------------------------------------------
consensus_12084#0 AACACTGCACTCGACGCTGCTTTGAACGCTCAATTTTTGGTCCAGATTGGTATTTTTACT 300
consensus_12084#2 ------------------------------------------------------------
consensus_12084#1 ------------------------------------------------------------
consensus_12084#0 GCAGTACCGATGATAATGGGTTTCATTTTGGAACTGGGGCTACTGAAGGCTATTTTCAGA 360
consensus_12084#2 ------------------------------------------------------------
consensus_12084#1 ------------------------------------------------------------
consensus_12084#0 TTTATTACAATGCAACTGCATTTCTGCTCAGTGTTTTTCACATTCTCTCTTGGAACTATA 420
consensus_12084#2 ------------------------------------------------------------
consensus_12084#1 ------------------------------------------------------------
consensus_12084#0 ACACATTATTTTGGGAGAACAATACTTCATGGTGGTGCAAAGTATCATGCTACTGGTAGA 480
consensus_12084#2 ------------------------------------------------------------
consensus_12084#1 ------------------------------------------------------------
consensus_12084#0 GGTTTTGTTGTTCGTCACATAAAATTTGCCGAAAATTATCGGCTCTATTCTCGAAGCCAC 540
consensus_12084#2 ------------------------------------------------------------
consensus_12084#1 ------------------------------------------------------------
consensus_12084#0 TTTGTGAAAGCGCTTGAAGTTGCTCTCCTCCTCATTATCTACATTGCATATGGTTATACA 600
consensus_12084#2 ------------------------------------------------------------
consensus_12084#1 ------------------------------------------------------------
consensus_12084#0 AGGGGCGGTTCATCTTCCTTTATTCTATTAACTATCAGTAGTTGGTTCCTCGTCGTGTCC 660
consensus_12084#2 ------------------------------------------------------------
consensus_12084#1 ------------------------------------------------------------
consensus_12084#0 TGGCTCTTCGCACCATACATTTTCAACCCTTCTGGTTTCGAGTGGCAAAAGACTGTTGAG 720
consensus_12084#2 ------------------------------------------------------------
consensus_12084#1 ------------------------------------------------------------
consensus_12084#0 GACTTTGATGACTGGACAAATTGGTTACTTTATAAAGGTGGAGTTGGTGTAAAGGGGGAA 780
consensus_12084#2 ------------------------------------------------------------
consensus_12084#1 ------------------------------------------------------------
consensus_12084#0 AACAGCTGGGAATCTTGGTGGGATGAGGAGCAAGCCCACATCCAGACATTAAGAGGACGT 840
consensus_12084#2 ------------------------------------------------------------
consensus_12084#1 ------------------------------------------------------------
consensus_12084#0 ATCCTAGAGACTATCCTAAGCCTCAGATTTCTTATTTTCCAATATGGCATTGTTTATAAG 900
consensus_12084#2 ------------------------------------------------------------
consensus_12084#1 ------------------------------------------------------------
consensus_12084#0 CTCAAAATTGCTTCACACAATACATCTCTTGCGGTTTATGGCTTCTCATGGATTGTACTT 960
consensus_12084#2 ------------------------------------------------------------
consensus_12084#1 -------------CAGTATATAAACCCTATATGGCTTATTGAGAACTAAACATTAGTTAC 47
consensus_12084#0 CTCGTTTTGGTGCTCCTATTTAAGCTTTTTACTGCAACTC---CGAAGAAGTCAACCGCC 1017
consensus_12084#2 -----------------------------------------------------------A 1
consensus_12084#1 GTCACTTGTGCATGCTTAGTAGTGTATCTCTTTCAAACTTGCTTGTATGTGTTATCTAAT 107
consensus_12084#0 TTGCCAACTTTTGTTCGGTTT----CTACAGGGCCTCCTTGCGATTGGAATGATTGCAGG 1073
consensus_12084#2 TTANCCNCTGCNAATTNGTNG----GTTAANAGGCTCCT--------GGATGGAGANGCG 49
consensus_12084#1 CTGCAGGATTCAATTCGACTCTGCGCCAGGGAAATATCACACACCATGAATATATCCAGG 167
* * * * * ** *
consensus_12084#0 A-ATTGCTCTACT--TATTGCATTGACAAAGTTTACAATTGCTGATCTATTTGCAAGTGC 1130
consensus_12084#2 G-ATG---TTAAT--TATGGNAT-GACAAAGTTAACA-TTGNNGATN-ATTGGCAGGGGG 100
consensus_12084#1 CTATCTGTTTAATATTTTTGCACTGCGAATGTGTATAAC--ATGAATAATGTGCACTCAT 225
** ** * * * * * * ** ** * * ** ** ***
consensus_12084#0 GCTTGCTTTTGTAGCAACTGGATGGTGTG--TTCTATGTCTGGCTGTCACATGGAAGCGC 1188
consensus_12084#2 G--TGGTTTTGTANCAA-TGGGAGGNGTG--TTNAATGT-TGGCNGTCACATGGA-GCGC 153
consensus_12084#1 TATGATTTGTGTATGAGATTGGTCCTGAGGATTTTAAATATGCATGGTTTTGGAATATGG 285
** **** * * * * * ** * * ** * * * *
consensus_12084#0 CTCGTGAAATTCGTTGGGCTCTGGGACTCAGTCCGTGAGATTGCTCGGATGTATGATGCC 1248
consensus_12084#2 -TTGNGAAATTGGTTGGGTTTTGGGA-TCAGTCCGTGAGAA-GTTCGGATGTATGATGCC 210
consensus_12084#1 CATGTGCACTTGCATTTTTTTTG----TTAGCATGTCTGGT-ACAGAGAATTAAGCGGCT 340
* * * ** * * ** * ** ** * ** ** * **
consensus_12084#0 GGAATGGGTGCTCTCATCTTTGTGCCCATTGTGTTCTTTTCATGGTTCCCCTTCGTATCC 1308
consensus_12084#2 GGAATGG-TGCTCTCATCTTAGTGCCCATTGTGTTCTTTTCATGGTTCCCCTTCGTATCC 269
consensus_12084#1 TGGACGCGTA-TTACACATACAT---CAATATGGTCTTCCCTT--TTCTTGGGCATGCAA 394
* * * * * ** * * ** * ** **** * * *** * *
consensus_12084#0 ACCTTCCAGT-CACGTTTCCTGTTTAATCAAGCTTTCAGCCGTGGTCTGGAGATCTCCCT 1367
consensus_12084#2 ACCTTCCAGT-CACGTTTCCTGTTTAATCAAGCTTTCAGCCGTGGTCTGGAGATCTCCCT 328
consensus_12084#1 ATTAGCAAATGCACTTGAACAGATGAACTAAACTTTCT----TACACTTTTGATTTATTT 450
* * * * *** * * * * ** ** ***** * ** *** * *
consensus_12084#0 CATCTTGGCAGGAAACAAGGCAAATCAGGAGGCATGAAAAGCCTAACCACCTAACCGCCT 1427
consensus_12084#2 CATCTTGGCAGGAAACAAGGCAAATCAGGAGGCATGAAAAGCCTAACCACCTAACCGCCT 388
consensus_12084#1 TTTTTTGGAAGT-------GCAGGTTAACATATTTGCGTAATGGGTGCATATGTCATCTT 503
* **** ** *** * * * ** * ** * * * *
consensus_12084#0 GGATATTTTTGTTGTATATTCTTGGAATTGATTAGTGGTACTTGATTTGAACAACACCTT 1487
consensus_12084#2 GGATATTTTTGTTGTATATTCTTGGAATTGATTAGTGGTACTTGATTTGAACAACACCTT 448
consensus_12084#1 GTGTACACTTGCATTTTAAAATCAGTATATCTTTGTTATCATTTCCCAAAATAATAATCT 563
* ** *** * ** * * ** ** ** * ** ** ** * *
consensus_12084#0 -----TGTACATAACTGCCTGCCATTTTAGGAGCAAATTATGTATCCAAACTAACAGTGC 1542
consensus_12084#2 -----TGTACATAACTGCCTGCCATTTTAGGAGCAAATTATGTATCCAAACTAACAGTGC 503
consensus_12084#1 AACAATCTATTTCACTTCTTTTAAGGNTGGGAAAGGACGAGATGTTGGTCTGAACCAAAT 623
* ** * *** * * * * *** * * * * ***
consensus_12084#0 CATGCCAGTTTAGATGTGAGTATTCATCTCTTGTTTGTAGCC--GTAACGACCTGTAATT 1600
consensus_12084#2 CATGCCAGTTTAGATGTGAGTATTCATCTCTTGTTTGTAGCC--GTAACGACCTGTAATT 561
consensus_12084#1 AGCACTTTTCGAAGGGAAAGTAGCCCGGTGGTAACGGNGAACAAGTTTTAAGCAGAGATG 683
* * * * **** * * * * * ** * * * **
consensus_12084#0 TGAACATTCCGGTA-ATTTGGATGCGACAATTCAGATAGCCTGATTGCTGTATTTGAGCA 1659
consensus_12084#2 TGAACATTCCGGTA-ATTTGGATGCGAC-------------------------------- 588
consensus_12084#1 TGTACCGTCTGGGGCAGCTGGTTGACTTCCTTTAGGATGCCTTACTTTTCTTTT------ 737
** ** ** ** * *** **
consensus_12084#0 AAAA 1663
consensus_12084#2 ----
consensus_12084#1 ----
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||