These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12086#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 3578 fasta sequence [TAGCTACTCTTGCAGAGATCGACACGCACGCATGGCGAGATCACTCGCGTTGCTCATGCTCCTGTTCAATTCCTCGCTGCTGCTCCCTCCGGCGAGCAGCGACGACGACGCCGCTGCTGCCGCCGTTCCCACGGGCGGCGCCGCCGCCGACGAGCTCGCGCTGCTCTCCTTCAGGTCGTCTCTTGTGTCCCAGGGGGGCTCGTCGCTGGCATCATGGAACACTACGTCCGGCCACGGCCAGCACTGCACATGGGCGGGTGTCGCGTGCGGCGGCCGGCGGGACAGGGTGGTCGAGCTGCGGCTGCGATCGTTCAACCTGTCCGGGACCATCTCGCCGTCGCTGGGCAACCTCTCCTTCCTCGCTAAGCTGCACCTCGGCGGCAACCACCTCTCCGGCGAGATACCGCCGGAGCTCGGCCGCCTAAGCAGGCTCCGGCGGTTGAACATGAGTGGCAACTCCCTCCAAGGGAGCATCCCCGCCGCCATTGGAGGCTGCTTTCGTCTCATCGAGATGGACCTCACCATCAACCAGCTCGAAGGTAAAATTCCCCTCCAGATTGGCGCCTCCATGAAAAATCTTGCCTACCTGTATCTCGAAGGAAATCGCCTGTCGGGACAGATCCCTCGATCGTTGGCAGAGCTGCCATCGATCCAAGAACTGTCACTAGGTAGCAACGGGCTATCAGGTGAGATTCCACCTGCTCTGGGCAATCTCACTGGCCTCTCGTTTCTTTCACTGTCAGAAAATTCACTCTCTGGAGGTATCCCTTCGTCTCTGTGCAATCTCACCAGCCTCTCCTCTCTCTATCTGAACAAGAATACACTGTCTGGAACAATCCCTTCGTGCTTGGGCAATCTCAACAGCCTCTTGGAGCTTGCTCTGTCTGACAACACGCTGTCTGGAGCAATCCCTTCATCTCTGGGTCGATTGTCTAGATTGTCTTCCCTTCACTTAAGCTCTAACAATTTAAGTGGACTGATCCCGGATCCTATTTGGAACATCTCCTCTCTCACCGTGTTCGGTGTCCAGTACAACATGCTGAGTGGTATGCTTCCTGCAAATGCATTCAGTACACTTCCCCATCTCCAAGAGGTATACATGGATAACAACCAGTTTCATGGGCATATCCCTGCATCAGTAGCTAATGCTTCCAACATCTCCATGCTTACCTTTGGTGTTAATTCTTTTAGCGGTGTTGTTCCTGAGGAAATCGGGAGGCTGAGAAATCTCGGCACGCTGGTTCTTGCGGAAACCCTTCTGGAAGCTGAAGGACCAAACGATTGGAAATTCATGACGGCATTGACGAATTGCTCCAATCTCCAACACGTAGAAATGGGTGCCTGCAAGTTTGGTGGTGTTCTTCCTGACTCTGTTTCCAATCTTTCCTCATCACTAGTATATCTCTCTATTGGAGCCAATAAAATTTCAGGAAGCTTGCCTAGAGATATTGGTAATCTCATTAATCTAGAATCCCTTGTTCTCTTTAACAACTCCTTGACAGGATCTCTTCCATCTTCCTTCAGCAAGCTTAAAAATTTGCATCGTCTCATTCTATTCAACAACAAATTAAGTGGTTATCTGCAATTGACCATCGGTAATCTTACACAAATAACTAACTTGGAGCTCTATGGTAATGCCTTCAGTGGCACAATACCAAGCACACTTGGAAACATGACCAGATTGTTTGAACTAAATCTTGCCCACAATAACTTTATAGGAGCAATTCCCACTGAAATATTTAGCATTCCCACACTCTCTGAAACTTTGGATGTGTCCCATAATAAATTGGAGGGATCAATACCAAAAGAAATAGGAGAACTTAAAAATATTGTTGAATTCCATGCGGATTCGAACAAATTATCGGGTGAAATCCCCAGCACCATTAGTGGATGCCAACTTCTACAGCATCTCTCCCT-GCAAAACAATTTCTTAAATGGCAACATCCCAATTGCTCTGACTCAGTTGGCAGGTCTTGACACACTTGATCTCTCAGGGAACAATTTGTCAGGTCAGATACCCAAGTCCTTAGGGGACATGCCTCTGCTCCACTCGCTGAACCTTTCATTCAACAGCTTTCAAGGAGAAGTGCCAACCAATGGTGTTTTTGCAAATGCTTCTGAAATTTATATCCAAGGCAATGCCAATATTTGCGGTGGCATACCTGAACTACGTCTTCCGCAGTGTTCCTTAAAATCAACAAAGAAAAAGAAACATCAAATTCTACTGATAGCTCTTACTGTCTGTCTCGTTTCGACACTTGCGATCTTTTCATTACTCTACATGCTTCTAACCTGTCATAAGAGAAGAAAGAAAGAAGTCCCTGCTATGACATCCATCCAAGGCCACCCAATGATCACTTACAAGCAGCTGGTAAAAGCAACAGATGGTTTTTCACCAGCCAATTTGTTGGGTTCTGGATCCTTTGGCTCTGTTTACAAAGGAGAACTTGATAGCCAACATGGTGAAAGTACAAGTTCTGTTGCAGTCAAGGTACTAAAGCTTGAAACTCCTAAGGCAGTCAAGAGTTTCACTGCCGAATGTGAAGCACTACGAAATATGCGTCATCGGAATCTTGTCAAGATAGTTACTATTTGCTCAAGCATTGATAACAAAGGGAATGATTTCAAAGCAATTGTGTATGACTTCATGCCCAACGGCAGTCTAGAAGATTGGCTACACCCTGAAACAAATTGTGATCAAGCAGAGCAGAGGCACTTAAATTTGCATCAAAGAGTGAACATACTACTTGATGTCGCCTGTGCATTGGACTATCTTCACTGCCTTGGACCTGAATCTGTTGTACATTGTGATATTAAATCAAGTAATGTGTTGTTAGATGCTGACATGGTAGCCCATGTTGGAGACTTTGGACTTGCAAGAATTCTAGTTAAGGAAAGCTCATTGATGCAACAGTCAACAAGCTCGATGGGATTCAGAGGGACAATTGGTTACGCAGCACCAGAGTATGGTGTCGGGAACATTGCGTCCACACATGGAGATATTTATAGTTACGGAATTCTAGTGTTGGAAACAGTAAGCGGAAAGCGACCAACCGATACTACATTCGGACCTGGATTGAGCCTCCGTCAGTATGTTGAACCGGGTCTACATGGTAGACTGATGGATGTTGTTGACAGGAAGCTCGTTTTGGATTCTAAGAGTTGGGTTCAGACTCCAGATATTTCTCCATGCAAAGAAATCAATGAGTGCCTTGTTTCACTGCTTAGACTTGGGTTGTCTTGCTCTCAGGAATTGCCATCGAGTAGAATGCAAACCGGAGATGTCATCAGTGAACTGCATGACATCAAAGAGTCTCTCTCGATGGCATCCATCATGTGAAATCATGTTAGAAATGTTCTTTAGAACAGATTTCTGCAGTGTTATTTACAACAGAGGAGTTATCTGAAGGGTGATTAATTTCTTGGTAATAGCTGTTTCCTGATCTGCACATCAGAACATTTCTCTATACTTGTATTTCTGAGAATTGCCGCACCTAATTAAGTACGATAGTAAATATTAATGCATACTCGTACTGCGTGGTATGTACTGATAACATGTCATTCTTTTCCAAGTATGC] [+] EMBL AK111589 [TAGCTACTCTTGCAGAGATCGACACGCACGCATGGCGAGATCACTCGCGTTGCTCATGCTCCTGTTCAATTCCTCGCTGCTGCTCCCTCCGGCGAGCAGCGACGACGACGCCGCTGCTGCCGCCGTTCCCACGGGCGGCGCCGCCGCCGACGAGCTCGCGCTGCTCTCCTTCAGGTCGTCTCTTGTGTCCCAGGGGGGCTCGTCGCTGGCATCATGGAACACTACGTCCGGCCACGGCCAGCACTGCACATGGGCGGGTGTCGCGTGCGGCGGCCGGCGGGACAGGGTGGTCGAGCTGCGGCTGCGATCGTTCAACCTGTCCGGGACCATCTCGCCGTCGCTGGGCAACCTCTCCTTCCTCGCTAAGCTGCACCTCGGCGGCAACCACCTCTCCGGCGAGATACCGCCGGAGCTCGGCCGCCTAAGCAGGCTCCGGCGGTTGAACATGAGTGGCAACTCCCTCCAAGGGAGCATCCCCGCCGCCATTGGAGGCTGCTTTCGTCTCATCGAGATGGACCTCACCATCAACCAGCTCGAAGGTAAAATTCCCCTCCAGATTGGCGCCTCCATGAAAAATCTTGCCTACCTGTATCTCGAAGGAAATCGCCTGTCGGGACAGATCCCTCGATCGTTGGCAGAGCTGCCATCGATCCAAGAACTGTCACTAGGTAGCAACGGGCTATCAGGTGAGATTCCACCTGCTCTGGGCAATCTCACTGGCCTCTCGTTTCTTTCACTGTCAGAAAATTCACTCTCTGGAGGTATCCCTTCGTCTCTGTGCAATCTCACCAGCCTCTCCTCTCTCTATCTGAACAAGAATACACTGTCTGGAACAATCCCTTCGTGCTTGGGCAATCTCAACAGCCTCTTGGAGCTTGCTCTGTCTGACAACACGCTGTCTGGAGCAATCCCTTCATCTCTGGGTCGATTGTCTAGATTGTCTTCCCTTCACTTAAGCTCTAACAATTTAAGTGGACTGATCCCGGATCCTATTTGGAACATCTCCTCTCTCACCGTGTTCGGTGTCCAGTACAACATGCTGAGTGGTATGCTTCCTGCAAATGCATTCAGTACACTTCCCCATCTCCAAGAGGTATACATGGATAACAACCAGTTTCATGGGCATATCCCTGCATCAGTAGCTAATGCTTCCAACATCTCCATGCTTACCTTTGGTGTTAATTCTTTTAGCGGTGTTGTTCCTGAGGAAATCGGGAGGCTGAGAAATCTCGGCACGCTGGTTCTTGCGGAAACCCTTCTGGAAGCTGAAGGACCAAACGATTGGAAATTCATGACGGCATTGACGAATTGCTCCAATCTCCAACACGTAGAAATGGGTGCCTGCAAGTTTGGTGGTGTTCTTCCTGACTCTGTTTCCAATCTTTCCTCATCACTAGTATATCTCTCTATTGGAGCCAATAAAATTTCAGGAAGCTTGCCTAGAGATATTGGTAATCTCATTAATCTAGAATCCCTTGTTCTCTTTAACAACTCCTTGACAGGATCTCTTCCATCTTCCTTCAGCAAGCTTAAAAATTTGCATCGTCTCATTCTATTCAACAACAAATTAAGTGGTTATCTGCAATTGACCATCGGTAATCTTACACAAATAACTAACTTGGAGCTCTATGGTAATGCCTTCAGTGGCACAATACCAAGCACACTTGGAAACATGACCAGATTGTTTGAACTAAATCTTGCCCACAATAACTTTATAGGAGCAATTCCCACTGAAATATTTAGCATTCCCACACTCTCTGAAACTTTGGATGTGTCCCATAATAAATTGGAGGGATCAATACCAAAAGAAATAGGAGAACTTAAAAATATTGTTGAATTCCATGCGGATTCGAACAAATTATCGGGTGAAATCCCCAGCACCATTAGTGGATGCCAACTTCTACAGCATCTCTCCCT GCAAAACAATTTCTTAAATGGCAACATCCCAATTGCTCTGACTCAGTTGGCAGGTCTTGACACACTTGATCTCTCAGGGAACAATTTGTCAGGTCAGATACCCAAGTCCTTAGGGGACATGCCTCTGCTCCACTCGCTGAACCTTTCATTCAACAGCTTTCAAGGAGAAGTGCCAACCAATGGTGTTTTTGCAAATGCTTCTGAAATTTATATCCAAGGCAATGCCAATATTTGCGGTGGCATACCTGAACTACGTCTTCCGCAGTGTTCCTTAAAATCAACAAAGAAAAAGAAACATCAAATTCTACTGATAGCTCTTACTGTCTGTCTCGTTTCGACACTTGCGATCTTTTCATTACTCTACATGCTTCTAACCTGTCATAAGAGAAGAAAGAAAGAAGTCCCTGCTATGACATCCATCCAAGGCCACCCAATGATCACTTACAAGCAGCTGGTAAAAGCAACAGATGGTTTTTCACCAGCCAATTTGTTGGGTTCTGGATCCTTTGGCTCTGTTTACAAAGGAGAACTTGATAGCCAACATGGTGAAAGTACAAGTTCTGTTGCAGTCAAGGTACTAAAGCTTGAAACTCCTAAGGCAGTCAAGAGTTTCACTGCCGAATGTGAAGCACTACGAAATATGCGTCATCGGAATCTTGTCAAGATAGTTACTATTTGCTCAAGCATTGATAACAAAGGGAATGATTTCAAAGCAATTGTGTATGACTTCATGCCCAACGGCAGTCTAGAAGATTGGCTACACCCTGAAACAAATTGTGATCAAGCAGAGCAGAGGCACTTAAATTTGCATCAAAGAGTGAACATACTACTTGATGTCGCCTGTGCATTGGACTATCTTCACTGCCTTGGACCTGAATCTGTTGTACATTGTGATATTAAATCAAGTAATGTGTTGTTAGATGCTGACATGGTAGCCCATGTTGGAGACTTTGGACTTGCAAGAATTCTAGTTAAGGAAAGCTCATTGATGCAACAGTCAACAAGCTCGATGGGATTCAGAGGGACAATTGGTTACGCAGCACCAGAGTATGGTGTCGGGAACATTGCGTCCACACATGGAGATATTTATAGTTACGGAATTCTAGTGTTGGAAACAGTAAGCGGAAAGCGACCAACCGATACTACATTCGGACCTGGATTGAGCCTCCGTCAGTATGTTGAACCGGGTCTACATGGTAGACTGATGGATGTTGTTGACAGGAAGCTCGTTTTGGATTCTAAGAGTTGGGTTCAGACTCCAGATATTTCTCCATGCAAAGAAATCAATGAGTGCCTTGTTTCACTGCTTAGACTTGGGTTGTCTTGCTCTCAGGAATTGCCATCGAGTAGAATGCAAACCGGAGATGTCATCAGTGAACTGCATGACATCAAAGAGTCTCTCTCGATGGCATCCATCATGTGAAATCATGTTAGAAATGTTCTTTAGAACAGATTTCTGCAGTGTTATTTACAACAGAGGAGTTATCTGAAGGGTGATTAATTTCTTGGTAATAGCTGTTTCCTGATCTGCACATCAGAACATTTCTCTATACTTGTATTTCTGAGAATTGCCGCACCTAATTAAGTACGATAGTAAATATTAATGCATACTCGTACTGCGTGGTATGTACTGATAACATGTCA ] [+] EMBL CB658494 [ TGCTGCTCCCTCCGGCGAGCAGCGACGACGACGCCGCTGCTGCCGCCGTTCCCACGGGCGGCGCCGCCGCCGACGAGCTCGCGCTGCTCTCCTTCAGGTCGTCTCTTGTGTCCCAGGGGGGCTCGTCGCTGGCATCATGGAACACTACGTCCGGCCACGGCCAGCACTGCACATGGGCGGGTGTCGCGTGCGGCGGCCGGCGGGACAGGGTGGTCGAGCTGCGGCTGCGATCGTTCAACCTGTCCGGGACCATCTCGCCGTCGCTGGGCAACCTCTCCTTCCTCGCTAAGCTGCACCTCGGCGGCAACCACCTCTCCGGCGAGATACCGCCGGAGCTCGGCCGCCTAAGCAGGCTCCGGCGGTTGAACATGAGTGGCAACTCCCTCCAAGGGAGCATCCCCGCCGCCATTGGAGGCTGCTTTCGTCTCATCGAGATGGACCTCACCATCAACCAGCTCGAAGGTAAAATTCCCCTCCAGATTGGCGCCTCCATGAAAAATCTTGCCTACCTGTATCTCGAAGGAAATCGCCTGTCGGGACAGATCCCTCGATCGTTGGCAGAGCTGCCATCGATCCAAGAACTGTCACTAGGTAGCAACGGGCTATCAGGTGAGATTCCACCTGCTCTGGGCAATCTCACTGGCCTCTCGTTTCTTTCACTGTCAGAAAATTCACTCTCTGGAGGTATCCCTTCGTCTCTGTGCAATCTCACCAGCCTCTCCTCTCTCTATCTGAACAAGAATACACTGTCTGGAACAATCCCCTCGTG ] [+] EMBL CB669627 [ ATCATCGAACACTACGTCCGGCCACGGCCAGCACTGCACATGGGCGGGTGTCGCGTGCGGCGGCCGGCGGGACAGGGTGGTCGAGCTGCGGCTGCGATCGTTCAACCTGTCCGGGACCATCTCGCCGTCGCTGGGCAACCTCTCCTTCCTCGCTAAGCTGCACCTCGGCGGCAACCACCTCTCCGGCGAGATACCGCCGGAGCTCGGCCGCCTAAGCAGGCTCCGGCGGTTGAACATGAGTGGCAACTCCCTCCAAGGGAGCATCCCCGCCGCCATTGGAGGCTGCTTTCGTCTCATCGAGATGGACCTCACCATCAACCAGCTCGAAGGTAAAATTCCCCTCCAGATTGGCGCCTCCATGAAAAATCTTGCCTACCTGTATCTCGAAGGAAATCGCCTGTCGGGACAGATCCCTCGATCGTTGGCAGAGCTGCCATCGATCCAAGAACTGTCACTAGGTAGCAACGGGCTATCAGGTGAGATTCCACCTGCTCTGGGCAATCTCACTGGCCTCTCGTTTCTTTCACTGTCAGAAAATTCACTCTCTGGAGGTATCCCTTCGTCTCTGTGCAATCTCACCAGCCTCTCCTCTCTCTATCTGAACAAGAATACACTGTCTGGAACAATCCCTTCGTGCTTGGGCAATCTCAACAGCCTCTTGGAGCTTGCTCTGTCTGACAACACGCTGTCTGGAGCAATCCCTTCATCTCTGGGTCGATTGTCTAGATTGTCTT ] [+] EMBL CB650910 [ CTGTGCAATCTCACCAGCCTCTCCTCTCTCTATCTGAACAAGAATACACTGTCTGGAACAATCCCTTCGTGCTTGGGCAATCTCAACAGCCTCTTGGAGCTTGCTCTGTCTGACAACACGCTGTCTGGAGCAATCCCTTCATCTCTGGGTCGATTGTCTAGATTGTCTTCCCTTCACTTAAGCTCTAACAATTTAAGTGGACTGATCCCGGATCCTATTTGGAACATCTCCTCTCTCACCGTGTTCGGTGTCCAGTACAACATGCTGAGTGGTATGCTTCCTGCAAATGCATTCAGTACACTTCCCCATCTCCAAGAGGTATACATGGATAACAACCAGTTTCATGGGCATATCCCTGCATCAGTAGCTAATGCTTCCAACATCTCCATGCTTACCTTTGGTGTTAATTCTTTTAGCGGTGTTGTTCCTGAGGAAATCGGGAGGCTGAGAAATCTCGGCACGCTGGTTCTTGCGGAAACCCTTCTGGAAGCTGAAGGACCAAACGATTGGAAATTCATGACGGCATTGACGAATTGCTCCAATCTCCAACACGTAGAAATGGGTGCCTGCAAGTTTGGTGGTGTTCTTCCTGACTCTGTTTCCAATCTTTCCTCATCACTAGTATATCTCTCTATTGGAGCCAATAAAATTTCAGGAAGCTTGCCTAGAGATATTGGTAATCTCATTAATCTAGAATCCCTTGTTCTCTTTAACAACTCCTTGACAGGATCTCTTCCATCTTCCTTCAGCAAGCTTAAAAATTTGCATCGTCTCATTCTATTCAACAACAAATTAAGTGGTTATCTGCAATTGACCATCGGTAATCTTACACAAATAACTAACTTGGAGCTCTAT ] [+] EMBL CB661773 [ GCATCAGTAGCTAATGCTTCCAACATCTCCATGCTTACCTTTGGTGTTAATTCTTTTAGCGGTGTTGTTCCTGAGGAAATCGGGAGGCTGAGAAATCTCGGCACGCTGGTTCTTGCGGAAACCCTTCTGGAAGCTGAAGGACCAAACGATTGGAAATTCATGACGGCATTGACGAATTGCTCCAATCTCCAACACGTAGAAATGGGTGCCTGCAAGTTTGGTGGTGTTCTTCCTGACTCTGTTTCCAATCTTTCCTCATCACTAGTATATCTCTCTATTGGAGCCAATAAAATTTCAGGAAGCTTGCCTAGAGATATTGGTAATCTCATTAATCTAGAATCCCTTGTTCTCTTTAACAACTCCTTGACAGGATCTCTTCCATCTTCCTTCAGCAAGCTTAAAAATTTGCATCGTCTCATTCTATTCAACAACAAATTAAGTGGTTATCTGCAATTGACCATCGGTAATCTTACACAAATAACTAACTTGGAGCTCTATGGTAATGCCTTCAGTGGCACAATACCAAGCACACTTGGAAACATGACCAGATTGTTTGAACTAAATCTTGCCCACAATAACTTTATAGGAGCAATTCCCACTGAAATATTTAGCATTCCCACACTCTCTGAAACTTTGGATGTGTCCCATAATAAATTGGAGGGATCAATACCAAAAGAAATAGGAGAACTTAAAAATATTGTTGAATTCCATGCGGATTCGAACAAATTATCGGGTGAAATCCCCAGCACCATTAGTGGATGCCAACTTCTACAGCATCTCTCCCTNGC AAACAATTTCTTAAATGGCAACATCCCAAT ] [+] EMBL CF304532 [ AAATTTATATCCAAGGCAATGCCAATATTTGCGGTGGCATACCTGAACTACGTCTTCCGCAGTGTTCCTTAAAATCAACAAAGAAAAAGAAACATCAAATTCTACTGATAGCTCTTACTGTCTGTCTCGTTTCGACACTTGCGATCTTTTCATTACTCTACATGCTTCTAACCTGTCATAAGAGAAGAAAGAAAGAAGTCCCTGCTATGACATCCATCCAAGGCCACCCAATGATCACTTACAAGCAGCTGGTAAAAGCAACAGATGGTTTTTCACCAGCCAATTTGTTGGGTTCTGGATCCTTTGGCTCTGTTTACAAAGGAGAACTTGATAGCCAACATGGTGAAAGTACAAGTTCTGTTGCAGTCAAGGTACTAAAGCTTGAAACTCCTAAGGCAGTCAAGAGTTTCACTGCCGAATGTGAAGCACTACGAAATATGCGTCATCGGAATCTTGTCAAGATAGTTACTATTTGCTCAAG ] [-] EMBL CB669626 [ TGATATTAAATCAAGTAAGGTGTTGTTAGATGCTGACATGGTAGCCCATGTTGGAGACTTTGGACTTGCAAGAATTCTAGTTAAGGAAAGCTCATTGATGCAACAGTCAACAAGCTCGATGGGATTCAGAGGGACAATTGGTTACGCAGCACCAGAGTATGGTGTCGGGAACATTGCGTCCACACATGGAGATATTTATAGTTACGGAATTCTAGTGTTGGAAACAGTAAGCGGAAAGCGACCAACCGATACTACATTCGGACCTGGATTGAGCCTCCGTCAGTATGTTGAACCGGGTCTCCATGGTAGACTGATGGATGTTGTTGACAGGAAGCTCGTTTTGGATTCTAAGAGTTGGGTTCAGACTCCAGATATTTCTCCATGCAAAGAAATCAATGAGTGCCTTGTTTCACTGCTTAGACTTGGGTTGTCTTGCTCTCAGGAATTGCCATCGAGTAGAATGCAAACCGGAGATGTCATCAGTGAACTGCATGACATCAAAGAGTCTCTCTCGATGGCATCCATCATGTGAAATCATGTTAGAAATGTTCTTTAGAACAGATTTCTGCAGTGTTATTTACAACAGAGGAGTTATCTGAAGGGTGATTAATTTCTTGGTAATAGCTGTTTCCTGATCTGCACATCAGAACATTTCTCTATACTTGTATTTCTGAGAATTGCCGCACCTAATTAAGTACGATAGTAAA ] [-] EMBL CB661774 [ AAGTAATGTGTTGTTAGATGCTGACATGGTAGCCCATGTTGGAGACTTTGGACTTGCAAGAATTCTAGTTAAGGAAAGCTCATTGATGCAACAGTCAACAAGCTCGATGGGATTCAGAGGGACAATTGGTTACGCAGCACCAGAGTATGGTGTCGGGAACATTGCGTCCACACATGGAGATATTTATAGTTACGGAATTCTAGTGTTGGAAACAGTAAGCGGAAAGCGACCAACCGATACTACATTCGGACCTGGATTGAGCCTCCGTCAGTATGTTGAACCGGGTCTACATGGTAGACTGATGGATGTTGTTGACAGGAAGCTCGTTTTGGATTCTAAGAGTTGGGTTCAGACTCCAGATATTTCTCCATGCAAAGAAATCAATGAGTGCCTTGTTTCACTGCTTAGACTTGGGTTGTCTTGCTCTCAGGAATTGCCATCGAGTAGAATGCAAACCGGAGATGTCATCAGTGAACTGCATGACATCAAAGAGTCTCTCTCGATGGCATCCATCATGTGAAATCATGTTAGAAATGTTCTTTAGAACAGATTTCTGCAGTGTTATTTACAACAGAGGAGTTATCTGAAGGGTGATTAATTTCTTGGTAATAGCTGTTTCCTGATCTGCACATCAGAACATTTCTCTATACTTGTATTTCTGAGAATTGCCGCCCCTAATTAAGTACGATAGTAAATATTAATGCATACTCGTACTGCGTGGTATGTACTGATAACATGT ] [-] EMBL CB658495 [ AGGGACAATTGGTTACGCAGCACCAGAGTATGGTGTGGGGAACATTGCGTCCACCCATGGAGATATTTATAGTTACGGAATTTTAGTGTTGGAAACAGTAAGCGGAAAGCGACCACCCGATACTACATTTGGCCCTGGATTGACCCTCCGTCAGTATGTTGAACCGGGTCTCCATGGTAGACTGATGGATGTTGTTGACAGGAAGCTCGTTTTGGATTCTAAGAGTTGGGTTCAGACTCCAGATATTTCTCCATGCAAAGAAATCAATGAGTGCCTTGTTTCACTGCTTAGACTTGGGTGGTCTTGCTCTCAGGAATTGCCATCGAGTAGAATGCAAACCGGAGATGTCATCAGTGAACTGCATGCCATCAAAGAGTCTCTCTGGATGGCATCCATCATGTGAAATCATGTTAGAAATGTTCTTTAGAACAGATTTCTGCAGTGTTATTTACACCAGAGGAGTTATCTGAAGGGTGATTAATTTTTTGGTAATAGCTGTTTCCTGATCTGCACATCAGAACATTTTTCTATACTCGTATTTGTGAGAATTGCCGCCCCTAATTAAGTAGGATAGTAAATATTAATGCATACTCGTACTGCGTGGTATGTACTGATAACATGTCATTCTTTTCCAAGTATGC] consensusID : consensus_12086#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 732 fasta sequence [CGAGACAAGGGGGGCTCGTCGCTGGCATATGGAACACTACGTCCGGCCACGGCCGCACTGCACATGGGCGGGTGTCGCGTGCGGCGGCCGGCGGGACAGGGTGGTCGAGCTGCGGCTGCGATCGTTCAACCTGTCCGGGACCATCTCGCCGTCGCTGGGCAACCTCTCCTTCCTCGCTAAGCTGCACCTCGGCGGCAACCACCTCTCCGGCGAGATACCGCCGGAGCTCGGCCGCCTAGGCAGGCTCCGGCGGTTGAACCTGAGTGGCAACTCCCTCCAAGGGAGCATCCCCGCCGCCATTGGAGGCTGCTTTCGTCTCATCGAGATGGACCTCACCATCAACCAGCTCGAAGAGTATGGTGTCGGGAACATTGCGTCGACACATGGAGATATTTATAGTTACGGAATTCTAGTGTTGGAAACAGTAAGCGGAAAGCGACCAACCGATACTACATTCGGACCTGGATTGAGCCTCCGTCAGTATGTTGAACCGGGTCTACATGGTAGACTGATGGATGTTGTTGACAGGAAGCTCGNTTTGGATTCTAAGAGNTGGGTTCAGACCCCAGATATTTCTCCATGCAAAGAAATCAATGAGTGCCCTTGNTTCACTGCTTANANCTTGGGGTTGTCTTGCTCTCANGAATTGCCNTCGAGTAGAATGCAAACCGGAGATGTCATTAAGTGGANCTGCNATGACATNAAAAGGGTCTCTCCTCCGATGGCATCCAT] [+] EMBL CB096544 [CGAGACAAGGGGGGCTCGTCGCTGGCATATGGAACACTACGTCCGGCCACGGCCGCACTGCACATGGGCGGGTGTCGCGTGCGGCGGCCGGCGGGACAGGGTGGTCGAGCTGCGGCTGCGATCGTTCAACCTGTCCGGGACCATCTCGCCGTCGCTGGGCAACCTCTCCTTCCTCGCTAAGCTGCACCTCGGCGGCAACCACCTCTCCGGCGAGATACCGCCGGAGCTCGGCCGCCTAGGCAGGCTCCGGCGGTTGAACCTGAGTGGCAACTCCCTCCAAGGGAGCATCCCCGCCGCCATTGGAGGCTGCTTTCGTCTCATCGAGATGGACCTCACCATCAACCAGCTCGAAGAGTATGGTGTCGGGAACATTGCGTCGACACATGGAGATATTTATAGTTACGGAATTCTAGTGTTGGAAACAGTAAGCGGAAAGCGACCAACCGATACTACATTCGGACCTGGATTGAGCCTCCGTCAGTATGTTGAACCGGGTCTACATGGTAGACTGATGGATGTTGTTGACAGGAAGCTCGNTTTGGATTCTAAGAGNTGGGTTCAGACCCCAGATATTTCTCCATGCAAAGAAATCAATGAGTGCCCTTGNTTCACTGCTTANANCTTGGGGTTGTCTTGCTCTCANGAATTGCCNTCGAGTAGAATGCAAACCGGAGATGTCATTAAGTGGANCTGCNATGACATNAAAAGGGTCTCTCCTCCGATGGCATCCAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12086#0 TAGCTACTCTTGCAGAGATCGACACGCACGCATGGCGAGATCACTCGCGTTGCTCATGCT 60 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 CCTGTTCAATTCCTCGCTGCTGCTCCCTCCGGCGAGCAGCGACGACGACGCCGCTGCTGC 120 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 CGCCGTTCCCACGGGCGGCGCCGCCGCCGACGAGCTCGCGCTGCTCTCCTTCAGGTCGTC 180 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 TCTTGTGTCCCAGGGGGGCTCGTCGCTGGCATCATGGAACACTACGTCCGGCCACGGCCA 240 consensus_12086#1 ---CGAGACA-AGGGGGGCTCGTCGCTGGCAT-ATGGAACACTACGTCCGGCCACGGCC- 54 * * * ********************* ************************** consensus_12086#0 GCACTGCACATGGGCGGGTGTCGCGTGCGGCGGCCGGCGGGACAGGGTGGTCGAGCTGCG 300 consensus_12086#1 GCACTGCACATGGGCGGGTGTCGCGTGCGGCGGCCGGCGGGACAGGGTGGTCGAGCTGCG 114 ************************************************************ consensus_12086#0 GCTGCGATCGTTCAACCTGTCCGGGACCATCTCGCCGTCGCTGGGCAACCTCTCCTTCCT 360 consensus_12086#1 GCTGCGATCGTTCAACCTGTCCGGGACCATCTCGCCGTCGCTGGGCAACCTCTCCTTCCT 174 ************************************************************ consensus_12086#0 CGCTAAGCTGCACCTCGGCGGCAACCACCTCTCCGGCGAGATACCGCCGGAGCTCGGCCG 420 consensus_12086#1 CGCTAAGCTGCACCTCGGCGGCAACCACCTCTCCGGCGAGATACCGCCGGAGCTCGGCCG 234 ************************************************************ consensus_12086#0 CCTAAGCAGGCTCCGGCGGTTGAACATGAGTGGCAACTCCCTCCAAGGGAGCATCCCCGC 480 consensus_12086#1 CCTAGGCAGGCTCCGGCGGTTGAACCTGAGTGGCAACTCCCTCCAAGGGAGCATCCCCGC 294 **** ******************** ********************************** consensus_12086#0 CGCCATTGGAGGCTGCTTTCGTCTCATCGAGATGGACCTCACCATCAACCAGCTCGAAGG 540 consensus_12086#1 CGCCATTGGAGGCTGCTTTCGTCTCATCGAGATGGACCTCACCATCAACCAGCTCGAAGA 354 *********************************************************** consensus_12086#0 TAAAATTCCCCTCCAGATTGGCGCCTCCATGAAAAATCTTGCCTACCTGTATCTCGAAGG 600 consensus_12086#1 GTATGGTGTCGGGAACATTG-CGTCGACACATGGAGA------TATTTATAGTT--ACGG 405 * * * * **** ** * ** * ** * ** * * ** consensus_12086#0 AAATCGCCTGTCGGGACAGATCCCTCGATCGTTGGCAGAGCTGCCA-TCGATCCAAGAAC 659 consensus_12086#1 AATTCTAGTGTTGGAAA--------CAGTAAGCGG-AAAGCGACCAACCGATACTACATT 456 ** ** *** ** * * * ** * *** *** **** * * * consensus_12086#0 TGTCACTAGGTAGCAACGGGCTATCAGGTGAGATTCCACCTGCTCTGGGCAATCTCACTG 719 consensus_12086#1 CGGACCTGGATTGAGCCT--CCGTCAGT--ATGTTGAACCGGGTCTA--------CATGG 504 * ** * * * * * **** * ** *** * *** ** * consensus_12086#0 GCCTCTCGTTTCTTTCACTGTCAGAAAATTCACTCTCTGGAGGTATCCCTTCGTCTCTGT 779 consensus_12086#1 TAGACTGATGGATGTTGTTGACAGGAAGCTCGNTTT------GGATTCTAAGAGNTGGGT 558 ** * * * ** *** ** ** * * * ** * * ** consensus_12086#0 GCAATCTCACCAGCCTCTCCTCTCTCTATCTGAACAAGAATACACTGTCTGGAACAATCC 839 consensus_12086#1 TCAGACCC--CAGATATTTCTCCATGCAAAGAAATCAATGAGTGCCCT-TGNTTCACTGC 615 ** * * *** * *** * * ** * * * ** ** * * consensus_12086#0 CTTCGTGCTTGGGCAATCTCAACAGCCTCTTGGAGCTTGCTCTGTCTGACAACACGCTGT 899 consensus_12086#1 TTANANCTTGGGGTTGTCTTG-----CTCTCANGAATTGCCN--TCGAGTAGAATGCAAA 668 * * *** *** **** **** ** * * ** consensus_12086#0 CTGGAGCAATCCCTTCATC--TCTGGGTCGATTGTCTAGATTGTCTTCCCTTCACTTAAG 957 consensus_12086#1 CCGGAGATGTCATTAAGTGGANCTGCNATGAC-ATNAAAAGGGTCTCTCCTCCGATGGCA 727 * **** ** * * *** ** * * * **** *** * * consensus_12086#0 CTCTAACAATTTAAGTGGACTGATCCCGGATCCTATTTGGAACATCTCCTCTCTCACCGT 1017 consensus_12086#1 TCCAT------------------------------------------------------- 732 * consensus_12086#0 GTTCGGTGTCCAGTACAACATGCTGAGTGGTATGCTTCCTGCAAATGCATTCAGTACACT 1077 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 TCCCCATCTCCAAGAGGTATACATGGATAACAACCAGTTTCATGGGCATATCCCTGCATC 1137 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 AGTAGCTAATGCTTCCAACATCTCCATGCTTACCTTTGGTGTTAATTCTTTTAGCGGTGT 1197 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 TGTTCCTGAGGAAATCGGGAGGCTGAGAAATCTCGGCACGCTGGTTCTTGCGGAAACCCT 1257 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 TCTGGAAGCTGAAGGACCAAACGATTGGAAATTCATGACGGCATTGACGAATTGCTCCAA 1317 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 TCTCCAACACGTAGAAATGGGTGCCTGCAAGTTTGGTGGTGTTCTTCCTGACTCTGTTTC 1377 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 CAATCTTTCCTCATCACTAGTATATCTCTCTATTGGAGCCAATAAAATTTCAGGAAGCTT 1437 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 GCCTAGAGATATTGGTAATCTCATTAATCTAGAATCCCTTGTTCTCTTTAACAACTCCTT 1497 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 GACAGGATCTCTTCCATCTTCCTTCAGCAAGCTTAAAAATTTGCATCGTCTCATTCTATT 1557 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 CAACAACAAATTAAGTGGTTATCTGCAATTGACCATCGGTAATCTTACACAAATAACTAA 1617 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 CTTGGAGCTCTATGGTAATGCCTTCAGTGGCACAATACCAAGCACACTTGGAAACATGAC 1677 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 CAGATTGTTTGAACTAAATCTTGCCCACAATAACTTTATAGGAGCAATTCCCACTGAAAT 1737 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 ATTTAGCATTCCCACACTCTCTGAAACTTTGGATGTGTCCCATAATAAATTGGAGGGATC 1797 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 AATACCAAAAGAAATAGGAGAACTTAAAAATATTGTTGAATTCCATGCGGATTCGAACAA 1857 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 ATTATCGGGTGAAATCCCCAGCACCATTAGTGGATGCCAACTTCTACAGCATCTCTCCCT 1917 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 GCAAAACAATTTCTTAAATGGCAACATCCCAATTGCTCTGACTCAGTTGGCAGGTCTTGA 1977 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 CACACTTGATCTCTCAGGGAACAATTTGTCAGGTCAGATACCCAAGTCCTTAGGGGACAT 2037 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 GCCTCTGCTCCACTCGCTGAACCTTTCATTCAACAGCTTTCAAGGAGAAGTGCCAACCAA 2097 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 TGGTGTTTTTGCAAATGCTTCTGAAATTTATATCCAAGGCAATGCCAATATTTGCGGTGG 2157 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 CATACCTGAACTACGTCTTCCGCAGTGTTCCTTAAAATCAACAAAGAAAAAGAAACATCA 2217 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 AATTCTACTGATAGCTCTTACTGTCTGTCTCGTTTCGACACTTGCGATCTTTTCATTACT 2277 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 CTACATGCTTCTAACCTGTCATAAGAGAAGAAAGAAAGAAGTCCCTGCTATGACATCCAT 2337 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 CCAAGGCCACCCAATGATCACTTACAAGCAGCTGGTAAAAGCAACAGATGGTTTTTCACC 2397 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 AGCCAATTTGTTGGGTTCTGGATCCTTTGGCTCTGTTTACAAAGGAGAACTTGATAGCCA 2457 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 ACATGGTGAAAGTACAAGTTCTGTTGCAGTCAAGGTACTAAAGCTTGAAACTCCTAAGGC 2517 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 AGTCAAGAGTTTCACTGCCGAATGTGAAGCACTACGAAATATGCGTCATCGGAATCTTGT 2577 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 CAAGATAGTTACTATTTGCTCAAGCATTGATAACAAAGGGAATGATTTCAAAGCAATTGT 2637 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 GTATGACTTCATGCCCAACGGCAGTCTAGAAGATTGGCTACACCCTGAAACAAATTGTGA 2697 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 TCAAGCAGAGCAGAGGCACTTAAATTTGCATCAAAGAGTGAACATACTACTTGATGTCGC 2757 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 CTGTGCATTGGACTATCTTCACTGCCTTGGACCTGAATCTGTTGTACATTGTGATATTAA 2817 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 ATCAAGTAATGTGTTGTTAGATGCTGACATGGTAGCCCATGTTGGAGACTTTGGACTTGC 2877 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 AAGAATTCTAGTTAAGGAAAGCTCATTGATGCAACAGTCAACAAGCTCGATGGGATTCAG 2937 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 AGGGACAATTGGTTACGCAGCACCAGAGTATGGTGTCGGGAACATTGCGTCCACACATGG 2997 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 AGATATTTATAGTTACGGAATTCTAGTGTTGGAAACAGTAAGCGGAAAGCGACCAACCGA 3057 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 TACTACATTCGGACCTGGATTGAGCCTCCGTCAGTATGTTGAACCGGGTCTACATGGTAG 3117 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 ACTGATGGATGTTGTTGACAGGAAGCTCGTTTTGGATTCTAAGAGTTGGGTTCAGACTCC 3177 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 AGATATTTCTCCATGCAAAGAAATCAATGAGTGCCTTGTTTCACTGCTTAGACTTGGGTT 3237 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 GTCTTGCTCTCAGGAATTGCCATCGAGTAGAATGCAAACCGGAGATGTCATCAGTGAACT 3297 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 GCATGACATCAAAGAGTCTCTCTCGATGGCATCCATCATGTGAAATCATGTTAGAAATGT 3357 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 TCTTTAGAACAGATTTCTGCAGTGTTATTTACAACAGAGGAGTTATCTGAAGGGTGATTA 3417 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 ATTTCTTGGTAATAGCTGTTTCCTGATCTGCACATCAGAACATTTCTCTATACTTGTATT 3477 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 TCTGAGAATTGCCGCACCTAATTAAGTACGATAGTAAATATTAATGCATACTCGTACTGC 3537 consensus_12086#1 ------------------------------------------------------------ consensus_12086#0 GTGGTATGTACTGATAACATGTCATTCTTTTCCAAGTATGC 3578 consensus_12086#1 ----------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||