cluster # 12107

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Oryza sativa
cluster # 12107 cluster # 12107 Sequences # 10 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12107#0 length = 996 sequences # 7
consensus_12107#1 length = 650 sequences # 1

consensus_12107#2 length = 263 sequences # 1
consensus_12107#3 length = 253 sequences # 1

consensusID : consensus_12107#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 996
fasta sequence

                              [ATGAGTTTGTCGCTTCTGCAAGGCTACTCCTCCGCCGAGGAAGACGACCCAGCCGCCGCCGGCGCCGGCGCTGGCGAGCTGAGCGACTCCGGCGACTCCTCCGCTGAGGACGCCGGATCAGACGGCGAGGAGGCTTCCGCTGCTCCGAGGCCAGCCGCGAAGCCCCGCCCCCGCCCAAACCCTAGCCGCGGGGATGCTGGCGGCGGCGGCGGGGACGGCTCATTGCTGCCCTCAGCACTGGATGCCTTCGCGGAGATATCGGGCCCGCCGGAGTTCCTGAACAATAGAGTCGCCGAGCCCGAGGAGGCCGTGGAGGCGCTCGGAGTGCTCGACCGCCGCGGCAAGGGCGGGAGGGGAAGTGACAGCAAGCAGCCGCCTCCTGGTGCCGTTGTGGTCGCAAAACCTCAATTGGTTGCAATTCGTGAACGAGTTAGCAGTGGAACAAATGGTGCCAACCCTCC-AGTTTCTACTGAAGGAAAGAGAATAATAGGTGCGGCAAATCCTGGTCCAGAAGATGCTGCTGATCTTCTAAGAATGTGCCTCCAATGTGGTATACCAAAGACCTATTCACACGCACGAGGTATGGTGTGTCCTGTTTGCAACGATAGACCAGAGCAGGCAAGAGAGCCAGAAAAGAAGAAAGGATCGACCGTCAAAGACAAGGAGAAGATCAAAAGGATGAGGGGGCAATCATCACACGCTTCGTGGAAGAGTGAAACTGAGATGGCCCTGCGGCAACAATTTGACTGATTACTAACTAGTGCCACCTCCTATACTTGGTGTCATGTGTTATGTACACTGCGAATACTTATGTAATCCTATCTTCATCAAAATCCCGTAGAACTGCCTCCAAGAGTCATAGTCGGTTCCCGATTGTGTTTGCTGTATTTTCAGTTTTCCACCATGAATATGGATTTGCTCGATAAGCTGAGAAATGGTTCCTTGCAAAATTCCGTCGAAGCCAAAGTTTGAGCCAATTGTATGATCANTTAAAAA]

[+] EMBL AK067176             [ATGAGTTTGTCGCTTCTGCAAGGCTACTCCTCCGCCGAGGAAGACGACCCAGCCGCCGCCGGCGCCGGCGCTGGCGAGCTGAGCGACTCCGGCGACTCCTCCGCTGAGGACGCCGGATCAGACGGCGAGGAGGCTTCCGCTGCTCCGAGGCCAGCCGCGAAGCCCCGCCCCCGCCCAAACCCTAGCCGCGGGGATGCTGGCGGCGGCGGCGGGGACGGCTCATTGCTGCCCTCAGCACTGGATGCCTTCGCGGAGATATCGGGCCCGCCGGAGTTCCTGAACAATAGAGTCGCCGAGCCCGAGGAGGCCGTGGAGGCGCTCGGAGTGCTCGACCGCCGCGGCAAGGGCGGGAGGGGAAGTGACAGCAAGCAGCCGCCTCCTGGTGCCGTTGTGGTCGCAAAACCTCAATTGGTTGCAATTCGTGAACGAGTTAGCAGTGGAACAAATGGTGCCAACCCTCC AGTTTCTACTGAAGGAAAGAGAATAATAGGTGCGGCAAATCCTGGTCCAGAAGATGCTGCTGATCTTCTAAGAATGTGCCTCCAATGTAGTATACCAAAGACCTATTCACACGCACGAGGTATGGTGTGTCCTGTTTGCAACGATAGACCAGAGCAGGCAAGAGAGCCAGAAAAGAAGAAAGGATCGACCGTCAAAGACAAGGAGAAGATCAAAAGGATGAGGGGGCAATCATCACACGCTTCGTGGAAGAGTGAAACTGAGATGGCCCTGCGGCAACAATTTGACTGATTACTAACTAGTGCCACCTCCTATACTTGGTGTCATGTGTTATGTACACTGCGAATACTTATGTAATCCTATCTTCATCAAAATCCCGTAGAACTGCCTCCAAGAGTCATAGTCGGTTCCCGATTGTGTTTGCTGTATTTTCAGTTTTCCACCATGAATATGGATTTGCT                                                                            ]
[+] EMBL OS07242A             [ TGAGTTTGTCGCTTCTGCAAGGCTACTCCTCCGCCGAGGAAGACGACCCAGCCGCCGCCGG GCCGGCGCTGGCGAGCTGAGCGACTCCGGCGACTCCTCCGCTGAGGACGCCGGATCAGACGGCGAGGAGGCTTCCGCTGCTCCGAGGCCAGCCGCGAAG CCCGCCCCCGCCCAAACCCTAGCCGCGGGGATGCTGGCGGCGGCGGCGGGGACGGCTCATTGCTGCCCTCAGCACTGGATGCCTTCGCGGAGATATCGGGCCCGTCGGAGTTCCTGAACAATAGAGTCGCCGAGCCCGAGGAGGCCGTGGAGGCGCTCGGAGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU081540             [    GTTTGTCGCTTCTGCAAGGCTACTCCTCCGCCGAGGAAGACGACCCAGCCGCCGCCGGCGCCGGCGCTGGCGAGCTGAGCGACTCCGGCGACTCCTCCGCTGAGGACGCCGGATCAGACGGCGAGGAGGCTTCCGCTGCTCCGAGGCCAGCCGNGAAGCCCCGCCCTCGACCAAACCCTAGCCGCGGGGATGCTGGCGGCGGCGGCGGAGACGGCTCATTGCTGCCCTCAGCACTGGATGCCTTNGCGGAGATATCGGGCCCGCCGGAGTTCCTGAACAATAGAGTCGCCGAGCCCGAGGAGGCCGTGGAGGCGCTCGGAGTGCTCGACCGTCGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU081538             [    GTTTGTCGCTTCTGCAAGGCTACTCCTCCGCCGAGGAAGACGACCCAGCCGCCGCCGGCGCCGGCGCTGGCGAGCTGAGCGACTCCGGCGACTCCTCCGCTGAGGACGCCGGATCAGACGGCGAGGAGGCTTCCGCTGCTCCGAGGCCAGCCGCGAAGCCCCGCCCCCGCCCAAACCCTAGCCGCGGGGATGCTGGCGGCGGCGGCGGGGACGGCTCATTGCTG CCTCAGCACTGGATGCCTTCGCGGAGATATCGGGCCCGCCGGAGTTCCTGAACAATAGAGTCGCCGAGCCCGAGGAGGCCGTGGAGGCGCTCGGAGTGCTCGACCGCCGCGGCAAGGGCGGGAGGGGAAGTGACAGCAAGCAGCCG CTTCTGGTGCCGTTGTGGTCGCAAAACCTCAATTGGTTGCAATTCGTGAACGAGTTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BI795353             [                                                                                                                                                                                                                                                                             cGAGTT CTG ACAATAGATTC CCGAGCCCGAGGA GCCGTGGAGGCGCTCGGAGTGCTCGACC CC C GCAA GGCGGGAGGGGAAGTGACAGCAAGCA CCGCCTCCT GTGCCGTTGTGGTC CAAAACCTCAATTGGTTGCAATTCGTGAACGAGTTAGCAGTGGAACAAATGGTGCCAACCCTCCAAGTTTCTACTGAAGGAAAGAGAATAATAGGTGCGGCAAATCCTGGTCCAGAAGATGCTGCTGATCTTCTAAGAATGTGCCTCCAATGTGGTATACCAAAGACCTATTCACACGCACGAGGTATGGTGTGTCCTGTTTGCAACGATAGACCAGAGCAGGCAAGAGAGCCAGAAAAGAAGAAAGGATCGACCGTCAAAGACAAGGAGAAGATCAAAAGGATGAGGGGGCAATCATCACACGCTTCGTGGAAGAGTGAAACTGAGATGGCCCTGCGGCAAC ATTTGACTGATTACTAACTAGTGCCACCTCCTATACTTGGTGTCATGTGTTATGTACACTGCGAGTAATTATGTAATCCTATCTTCATCAAAAa                                                                                                                                                                  ]
[+] EMBL AU081539             [                                                                                                                                                                                                                                                                                                                            CGCTCGAAGTGCTCGCCCGCCGCGGCAAGGCCGGAAGGGGAAGTGNCAGCAAGCAGCCGCNTCCTGGTGCCGTTGTGGTCGCAAAACCTCAATTGGTTGCAATTCGTGAACGAGTTAGCAGTGGACCAAATGGTGCCAACCCTCC AGTTTCTACTGAAGGAAAGAGAATAATAGGTGCGGCAAATCCTGGTCCAGAAGATGCTGCTGATCTTCTAAGAATGTGCCTCCAATGTGGTATACCAAAGACCTATTCACACGCACGAGGTATGGTGTGTCCTGTTTGCAACGATAGACCAGAGCAGGCAAGAGAGCCAGAAAAGAAGAAAGGATCGACCGTCAAAGACAAGGAGAAGATCAAAAGGATGAGGGGGCAATCATCACACGCTTCGTGGAAGAGTGAAACTGAGATGGCCCTGCGGCAACAATTTGACTGATTACTAACTAGTGCCACCTCCTATACTTGGTGTCATGTGTTATGTACACTGCGAATACTTATGTAATCCTATCTTCATCAAAATCCCGTAGAACTGCCTCCAAGAGTCATAGTCGGTTCCCGATTGTGTTTGCTGTATTTTCAGTTTTCCACCATGAATATGGATTTGCTCGATAAGCTGAGAAATGGTTCCTTGCAAAATTCCGTCGAAGCCAAAGTTTGAGCCAATTGTATGATCANTTAAAAA]
[+] EMBL AU081541             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAAGACCTATTCACACGCACGAGGTATGGTGTGTCCTGTTTGCAACGATAGACCAGAGCAGGCAAGAGAGCCAGAAAAGAAGAAAGGATCGACCGTCAAAGACAAGGAGAAGATCAAAAGGATGAGGGGGCAATCATCACACGCTTCGTGGAAGAGTGAAACTGAGATGGCCCTGCGGCAACAATTTGACTGATTACTAACTAGTGCCACCTCCTATACTTGGTGTCATGTGTTATGTACACTGCGAATACTTATGTAATCCTATCTTCATCAAAATCCCGTAGAACTGCCTCCAAGAGTCATAGTCGGTTCCCGATTGTGTTTGCTGTATTTTCAGTTTTCCACCATGAATATGGATTTGCTCGATAAGCTGAGAAATGGTTCCTTGCAAAATTCCGTCGAAGCCAAAGTTTGAGCCAATTGTATGATCATTTAAAAA]




>consensus_12107#0
ATGAGTTTGTCGCTTCTGCAAGGCTACTCCTCCGCCGAGGAAGACGACCCAGCCGCCGCC
GGCGCCGGCGCTGGCGAGCTGAGCGACTCCGGCGACTCCTCCGCTGAGGACGCCGGATCA
GACGGCGAGGAGGCTTCCGCTGCTCCGAGGCCAGCCGCGAAGCCCCGCCCCCGCCCAAAC
CCTAGCCGCGGGGATGCTGGCGGCGGCGGCGGGGACGGCTCATTGCTGCCCTCAGCACTG
GATGCCTTCGCGGAGATATCGGGCCCGCCGGAGTTCCTGAACAATAGAGTCGCCGAGCCC
GAGGAGGCCGTGGAGGCGCTCGGAGTGCTCGACCGCCGCGGCAAGGGCGGGAGGGGAAGT
GACAGCAAGCAGCCGCCTCCTGGTGCCGTTGTGGTCGCAAAACCTCAATTGGTTGCAATT
CGTGAACGAGTTAGCAGTGGAACAAATGGTGCCAACCCTCCAGTTTCTACTGAAGGAAAG
AGAATAATAGGTGCGGCAAATCCTGGTCCAGAAGATGCTGCTGATCTTCTAAGAATGTGC
CTCCAATGTGGTATACCAAAGACCTATTCACACGCACGAGGTATGGTGTGTCCTGTTTGC
AACGATAGACCAGAGCAGGCAAGAGAGCCAGAAAAGAAGAAAGGATCGACCGTCAAAGAC
AAGGAGAAGATCAAAAGGATGAGGGGGCAATCATCACACGCTTCGTGGAAGAGTGAAACT
GAGATGGCCCTGCGGCAACAATTTGACTGATTACTAACTAGTGCCACCTCCTATACTTGG
TGTCATGTGTTATGTACACTGCGAATACTTATGTAATCCTATCTTCATCAAAATCCCGTA
GAACTGCCTCCAAGAGTCATAGTCGGTTCCCGATTGTGTTTGCTGTATTTTCAGTTTTCC
ACCATGAATATGGATTTGCTCGATAAGCTGAGAAATGGTTCCTTGCAAAATTCCGTCGAA
GCCAAAGTTTGAGCCAATTGTATGATCANTTAAAAA

consensusID : consensus_12107#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 650
fasta sequence

                              [GAGTNCTCGACCCCCCGCNCCAAGGCCGGAAGGGGAATNACAGCAAGCAGCCGCCTCCTGGTGCCCGTTNTGGTCGCAAACCTCAATTGGTTGCAATTCGTGAACGAGTTAGCAGTGGAACAAATGGTGCCAACCCTCCAGTTTCTACTGAAGGAAAGAGAATAATAGGTGCGGCAAATCCTGGTCCAGAAGATGCTGCTGATCTTCTAAGAAATGTGCCTCCAATGTGGTATACCAAAGACCTATTCACACGCACGAGGTATGGTGTGTCCTGTTTGCAACGATAGACCAGAGCAGGCAAGAGAGCCAGAAAAGAAGAAAGGATCGACCGTCAAAGACAAGGAGAAGATCAAAAGGATGAGGGGGCAATCATCACACGCTTCGTGGAAGAGTGAAACTGAGATGGCCTGCGGCAACAATTTGACTGATTACTAACTAGTGCCACCTCCTATACTTGGTGTCATGTGTTATGTACACTGCGAATACTTATGTAATCCTATCTTCATCAAAATCCCGTAGAACTGCCTCCAAGAGTCATAGTCGGTTCCCGATTGTGTTTGCTGTATTTTCAGTTTTCCACCATGAATATGGATTTGCTCGATAAGCTGAGAAATGGTTCCTTGCAAAAAAANAAANNAAAAAAAAAAAAA]

[+] EMBL C98112               [GAGTNCTCGACCCCCCGCNCCAAGGCCGGAAGGGGAATNACAGCAAGCAGCCGCCTCCTGGTGCCCGTTNTGGTCGCAAACCTCAATTGGTTGCAATTCGTGAACGAGTTAGCAGTGGAACAAATGGTGCCAACCCTCCAGTTTCTACTGAAGGAAAGAGAATAATAGGTGCGGCAAATCCTGGTCCAGAAGATGCTGCTGATCTTCTAAGAAATGTGCCTCCAATGTGGTATACCAAAGACCTATTCACACGCACGAGGTATGGTGTGTCCTGTTTGCAACGATAGACCAGAGCAGGCAAGAGAGCCAGAAAAGAAGAAAGGATCGACCGTCAAAGACAAGGAGAAGATCAAAAGGATGAGGGGGCAATCATCACACGCTTCGTGGAAGAGTGAAACTGAGATGGCCTGCGGCAACAATTTGACTGATTACTAACTAGTGCCACCTCCTATACTTGGTGTCATGTGTTATGTACACTGCGAATACTTATGTAATCCTATCTTCATCAAAATCCCGTAGAACTGCCTCCAAGAGTCATAGTCGGTTCCCGATTGTGTTTGCTGTATTTTCAGTTTTCCACCATGAATATGGATTTGCTCGATAAGCTGAGAAATGGTTCCTTGCAAAAAAANAAANNAAAAAAAAAAAAA]




>consensus_12107#1
GAGTNCTCGACCCCCCGCNCCAAGGCCGGAAGGGGAATNACAGCAAGCAGCCGCCTCCTG
GTGCCCGTTNTGGTCGCAAACCTCAATTGGTTGCAATTCGTGAACGAGTTAGCAGTGGAA
CAAATGGTGCCAACCCTCCAGTTTCTACTGAAGGAAAGAGAATAATAGGTGCGGCAAATC
CTGGTCCAGAAGATGCTGCTGATCTTCTAAGAAATGTGCCTCCAATGTGGTATACCAAAG
ACCTATTCACACGCACGAGGTATGGTGTGTCCTGTTTGCAACGATAGACCAGAGCAGGCA
AGAGAGCCAGAAAAGAAGAAAGGATCGACCGTCAAAGACAAGGAGAAGATCAAAAGGATG
AGGGGGCAATCATCACACGCTTCGTGGAAGAGTGAAACTGAGATGGCCTGCGGCAACAAT
TTGACTGATTACTAACTAGTGCCACCTCCTATACTTGGTGTCATGTGTTATGTACACTGC
GAATACTTATGTAATCCTATCTTCATCAAAATCCCGTAGAACTGCCTCCAAGAGTCATAG
TCGGTTCCCGATTGTGTTTGCTGTATTTTCAGTTTTCCACCATGAATATGGATTTGCTCG
ATAAGCTGAGAAATGGTTCCTTGCAAAAAAANAAANNAAAAAAAAAAAAA

consensusID : consensus_12107#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 263
fasta sequence

                              [ATNTNTGATNGCTTCTNCAAGGCTACTCCTGCANCGAGGAAGACGACCCANCCGCCGCCGGGCCCGGCNCTGGCNAGCTGAGCNACTCCGGCNACTCCTCCGCTGAGGACGCCGGATCAAACGGCGAGGAGGCTTCCNCTGCTCCNAGGCCAGCCGCNAAGCCCGNCCCCGNCCAAACCCTAGCCGCGGGGATGCTGGCGGCGGCGGCGGGGACGGCTCATTGCTGCCCTCAGCACTGGATGCCTTCGCGGAGATATCGGGCC]

[+] EMBL AU069111             [ATNTNTGATNGCTTCTNCAAGGCTACTCCTGCANCGAGGAAGACGACCCANCCGCCGCCGGGCCCGGCNCTGGCNAGCTGAGCNACTCCGGCNACTCCTCCGCTGAGGACGCCGGATCAAACGGCGAGGAGGCTTCCNCTGCTCCNAGGCCAGCCGCNAAGCCCGNCCCCGNCCAAACCCTAGCCGCGGGGATGCTGGCGGCGGCGGCGGGGACGGCTCATTGCTGCCCTCAGCACTGGATGCCTTCGCGGAGATATCGGGCC]




>consensus_12107#2
ATNTNTGATNGCTTCTNCAAGGCTACTCCTGCANCGAGGAAGACGACCCANCCGCCGCCG
GGCCCGGCNCTGGCNAGCTGAGCNACTCCGGCNACTCCTCCGCTGAGGACGCCGGATCAA
ACGGCGAGGAGGCTTCCNCTGCTCCNAGGCCAGCCGCNAAGCCCGNCCCCGNCCAAACCC
TAGCCGCGGGGATGCTGGCGGCGGCGGCGGGGACGGCTCATTGCTGCCCTCAGCACTGGA
TGCCTTCGCGGAGATATCGGGCC

consensusID : consensus_12107#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 253
fasta sequence

                              [CGGCAACAATTTGACTGATTACTAACTAGNGCCCCCNCCTAAACTTGGNGTCATGTGTTATGTACCCTGCGAAAACTTATGTAATCCTATTTTCATCAAAATCCCGTANAACTGCCNCCAAAAGTNANANTCGGTTCCCGATTGTGTTTGCTGTATTTTCAGTTTTCCCCCATGAANATGGATTTGCTCGATAANCTGANAAATGGTTCCTTNCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU166903             [CGGCAACAATTTGACTGATTACTAACTAGNGCCCCCNCCTAAACTTGGNGTCATGTGTTATGTACCCTGCGAAAACTTATGTAATCCTATTTTCATCAAAATCCCGTANAACTGCCNCCAAAAGTNANANTCGGTTCCCGATTGTGTTTGCTGTATTTTCAGTTTTCCCCCATGAANATGGATTTGCTCGATAANCTGANAAATGGTTCCTTNCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_12107#3
CGGCAACAATTTGACTGATTACTAACTAGNGCCCCCNCCTAAACTTGGNGTCATGTGTTA
TGTACCCTGCGAAAACTTATGTAATCCTATTTTCATCAAAATCCCGTANAACTGCCNCCA
AAAGTNANANTCGGTTCCCGATTGTGTTTGCTGTATTTTCAGTTTTCCCCCATGAANATG
GATTTGCTCGATAANCTGANAAATGGTTCCTTNCAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12107#1      ------------------------------------------------------------
consensus_12107#3      ------------------------------------------------------------
consensus_12107#0      ATGAGTTTGTCGCTTCTGCAAGGCTACTCCTCCGCCGAGGAAGACGACCCAGCCGCCGCC 60
consensus_12107#2      ------------------------------------------------------------
                                                                                   

consensus_12107#1      ------------------------------------------------------------
consensus_12107#3      ------------------------------------------------------------
consensus_12107#0      GGCGCCGGCGCTGGCGAGCTGAGCGACTCCGGCGACTCCTCCGCTGAGGACGCCGGATCA 120
consensus_12107#2      ------------------------------------------------------------
                                                                                   

consensus_12107#1      ------------------------------------------------------------
consensus_12107#3      ------------------------------------------------------------
consensus_12107#0      GACGGCGAGGAGGCTTCCGCTGCTCCGAGGCCAGCCGCGAAGCCCCGCCCCCGCCCAAAC 180
consensus_12107#2      ------------------------------------------------------------
                                                                                   

consensus_12107#1      ------------------------------------------------------------
consensus_12107#3      ------------------------------------------------------------
consensus_12107#0      CCTAGCCGCGGGGATGCTGGCGGCGGCGGCGGGGACGGCTCATTGCTGCCCTCAGCACTG 240
consensus_12107#2      ------------------------------------------------------------
                                                                                   

consensus_12107#1      ------------------------------------------------------------
consensus_12107#3      ------------------------------------------------------------
consensus_12107#0      GATGCCTTCGCGGAGATATCGGGCCCGCCGGAGTTCCTGAACAATAGAGTCGCCGAGCCC 300
consensus_12107#2      ------------------------------------------------------------
                                                                                   

consensus_12107#1      ----------------------GAGTNCTCGACCCCCCGCNCCAAGGCCGGAAGGGGAAT 38
consensus_12107#3      ------------------------------------------------------------
consensus_12107#0      GAGGAGGCCGTGGAGGCGCTCGGAGTGCTCGACCGCCGCGGCAAGGGCGGGAGGGGAAGT 360
consensus_12107#2      ------------------------------------------------------------
                                                                                   

consensus_12107#1      NACAGCAAGCAGCCGCCTCCTGGTGCCCGTTNTGGTCGCAAACCTCAATTGGTTGCAATT 98
consensus_12107#3      ------------------------------------------------------------
consensus_12107#0      GACAGCAAGCAGCCGCCTCCTGGTGCCGTTGTGGTCGCAAAACCTCAATTGGTTGCAATT 420
consensus_12107#2      ------------------------------------------------------------
                                                                                   

consensus_12107#1      CGTGAACGAGTTAGCAGTGGAACAAATGGTGCCAACCCTCCAGTTTCTACTGAAGGAAAG 158
consensus_12107#3      ------------------------------------------------------------
consensus_12107#0      CGTGAACGAGTTAGCAGTGGAACAAATGGTGCCAACCCTCCAGTTTCTACTGAAGGAAAG 480
consensus_12107#2      ------------------------------------------------------------
                                                                                   

consensus_12107#1      AGAATAATAGGTGCGGCAAATCCTGGTCCAGAAGATGCTGCTGATCTTCTAAGAAATGTG 218
consensus_12107#3      ------------------------------------------------------------
consensus_12107#0      AGAATAATAGGTGCGGCAAATCCTGGTCCAGAAGATGCTGCTGATCTTCTAAGAA-TGTG 539
consensus_12107#2      ------------------------------------------------------------
                                                                                   

consensus_12107#1      CCTCCAATGTGGTATACCAAAGACCTATTCACACGCACGAGGTATGGTGTGTCCTGTTTG 278
consensus_12107#3      ------------------------------------------------------------
consensus_12107#0      CCTCCAATGTGGTATACCAAAGACCTATTCACACGCACGAGGTATGGTGTGTCCTGTTTG 599
consensus_12107#2      ------------------------------------------------------------
                                                                                   

consensus_12107#1      CAACGATAGACCAGAGCAGGCAAGAGAGCCAGAAAAGAAGAAAGGATCGACCGTCAAAGA 338
consensus_12107#3      ------------------------------------------------------------
consensus_12107#0      CAACGATAGACCAGAGCAGGCAAGAGAGCCAGAAAAGAAGAAAGGATCGACCGTCAAAGA 659
consensus_12107#2      ------------------------------------------------------------
                                                                                   

consensus_12107#1      CAAGGAGAAGATCAAAAGGATGAGGGGGCAATCATCACACGCTTCGTGGAAGAGTGAAAC 398
consensus_12107#3      ------------------------------------------------------------
consensus_12107#0      CAAGGAGAAGATCAAAAGGATGAGGGGGCAATCATCACACGCTTCGTGGAAGAGTGAAAC 719
consensus_12107#2      ------------------------------------------ATNTNTGATNGCTTCTNC 18
                                                                                   

consensus_12107#1      TGAGATGGCC-TGCGGCAAC-AATTTGACTGATTACTAACTAGTGCCACCTCC--TATAC 454
consensus_12107#3      -------------CGGCAAC-AATTTGACTGATTACTAACTAGNGCCCCCNCC--TAAAC 44
consensus_12107#0      TGAGATGGCCCTGCGGCAAC-AATTTGACTGATTACTAACTAGTGCCACCTCC--TATAC 776
consensus_12107#2      AAGGCTACTCCTGCANCGAGGAAGACGACCCANCCGCCGCCGGGCCCGGCNCTGGCNAGC 78
                                    *  * *  **   ***  *       *  *  **  * *       *

consensus_12107#1      TTGGTGTCATGTGTTATGTACACTGCGAATACTTATGTAATCCTATCTTCATCAAAATCC 514
consensus_12107#3      TTGGNGTCATGTGTTATGTACCCTGCGAAAACTTATGTAATCCTATTTTCATCAAAATCC 104
consensus_12107#0      TTGGTGTCATGTGTTATGTACACTGCGAATACTTATGTAATCCTATCTTCATCAAAATCC 836
consensus_12107#2      TGAGCNACTCCGGCNACTCCTCCGCTGAGGAC--GCCGGATCAAACGGCGAGGAGGCTTC 136
                       *  *   *    *  *      *   **  **       ***  *     *  *   * *

consensus_12107#1      CGTAGAACTGCCTCCAAGAGTCATAGTCGGTTCCCG----ATTGTGTTTGCTGTATTTTC 570
consensus_12107#3      CGTANAACTGCCNCCAAAAGTNANANTCGGTTCCCG----ATTGTGTTTGCTGTATTTTC 160
consensus_12107#0      CGTAGAACTGCCTCCAAGAGTCATAGTCGGTTCCCG----ATTGTGTTTGCTGTATTTTC 892
consensus_12107#2      CNCTGCTCCNAGGCCAGCCGCNAAGCCCGNCCCCGNCCAAACCCTAGCCGCGGGGATGCT 196
                       *      *     ***   *  *    **   **      *   *    ** *   *   

consensus_12107#1      AGTTTTCCACCATGAATATGGATTTGCTCGATAAGCTGAGAAATGGTTCCTTGCAAAAAA 630
consensus_12107#3      AGTTTTCCCCCATGAANATGGATTTGCTCGATAANCTGANAAATGGTTCCTTNCAAAAAA 220
consensus_12107#0      AGTTTTCCACCATGAATATGGATTTGCTCGATAAGCTGAGAAATGGTTCCTTGCAAAATT 952
consensus_12107#2      GGCGG-CGGCGGCGGGGACGGCTCA--TTGCTGCCCTCAGCACTGGATGCCTTCGCGGAG 253
                        *    *  *   *   * ** *    * * *   ** *  * *** * * * *      

consensus_12107#1      ANAAANNAAAAAAAAAAAAA------------------------ 650
consensus_12107#3      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----------- 253
consensus_12107#0      CCGTCGAAGCCAAAGTTTGAGCCAATTGTATGATCANTTAAAAA 996
consensus_12107#2      ATATCGGGCC---------------------------------- 263