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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12108#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1356 fasta sequence
[CCGCAACTCCGCCGAGTTCGCCGCCTCCGCCTCCGCCTCCCGACGGCGGCAAGGCAACCGCTCGCGCCGCCGCCGCCTCGGCCCAACCAGCGCCTCCGTTCGCGCGTGTCCGGCCCTGCCGCGACGGCGGTGAGACTGCCATGGCCTCCTCCAAGCTCTACTCCGATGACGTCAGCCTCGCCGTCGTCGTCGTCGACACCAACCCCTTGTTCTGGGCCACCGCCGCCCTCCCCTTCGCCGACTTCTTCGCCCATCTGATCCACTACGTGAACTCGCTCTTGCTTCTGAACCACCTCAACCATGTGGTCGTCATCGCCGCGGGGCTTAGCTCTTGCACCTACATCTTCGACTCGAGCGATGCTAGTGCCTCTGGTGCTGCAGACGTCGCGGCCACCTTCGCAAAGGCGAGCCGCAAGATGGATGAGTTCATTGCAGAAGACGCCCGTGCCACTAGCAGCAATGGTTCCGTTGCTGATGGCAATGCAGCCTCTCTTCTCTCAGGCGCACTGTCCCTTGCTCTGTGCTATATACAGAGGGTTTTTCGGTCTGGTACTCGACATCCACAACCTCGGATTTTATGCCTGCAGGGTTCTCCAGATGGACCTGAACAATATGTAGCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCCCAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATAT-AACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACTGATTTACACTCAAGAACCTTTCTGCGCCTCCCCAAGACTCTGGGAGTGGATTTCCGTGCTTCATGTTTCTGCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTCTGCAAGTATCATAAGAAGTGTTCGACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTCTGTACCTGATCAAAGGCAGTAGTCTACACTACAGATGGCGAAATATCAGACTGCAGACTTCTCTTTATGTTCTCCACAGGTTCAACTGATACAGAATGGGCATTGTGTGCATACTTGAAGCAGCGTCAGTTTAGCAAAAACTAGGCAACTGGGCGTAGCAATTTTGTCAACTGATGAGGGAACTCACG-CCCGACTTTTGGAATTAGTTTGCCTGCAATTTGTAAAGTTGGCACATGAA-CTTGTGATGCACCATTTGCAAATGCTCTTTTTTTGCTTACCGAAAACAGGACAACAGGTCAAGCTAGTAGATGGCAAATCATTTTTCTTGTCATGGTGACACAGGTTGCGCTAATGTCTTGATATATTAC]
[+] EMBL AK121932 [CCGCAACTCCGCCGAGTTCGCCGCCTCCGCCTCCGCCTCCCGACGGCGGCAAGGCAACCGCTCGCGCCGCCGCCGCCTCGGCCCAACCAGCGCCTCCGTTCGCGCGTGTCCGGCCCTGCCGCGACGGCGGTGAGACTGCCATGGCCTCCTCCAAGCTCTACTCCGATGACGTCAGCCTCGCCGTCGTCGTCGTCGACACCAACCCCTTGTTCTGGGCCACCGCCGCCCTCCCCTTCGCCGACTTCTTCGCCCATCTGATCCACTACGTGAACTCGCTCTTGCTTCTGAACCACCTCAACCATGTGGTCGTCATCGCCGCGGGGCTTAGCTCTTGCACCTACATCTTCGACTCGAGCGATGCTAGTGCCTCTGGTGCTGCAGACGTCGCGGCCACCTTCGCAAAGGCGAGCCGCAAGATGGATGAGTTCATTGCAGAAGACGCCCGTGCCACTAGCAGCAATGGTTCCGTTGCTGATGGCAATGCAGCCTCTCTTCTCTCAGGCGCACTGTCCCTTGCTCTGTGCTATATACAGAGGGTTTTTCGGTCTGGTACTCGACATCCACAACCTCGGATTTTATGCCTGCAGGGTTCTCCAGATGGACCTGAACAATATGTAGCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCCCAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATAT AACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACTGATTTACACTCAAGAACATTTCTGCGCCTCCCCAAGACTCTGGGAGTGGATTTCCGTGCTTCATGTTTCTGCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTCTGCAAGTATCATAAGAAGTGTTCGACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTCTGTACCTGATCAAAGGCAGTAGTCTACACTACAGATGGCGAAATATCAGACTGCAGACTTCTCTTTATGTTCTCCACAGGTTCAACTGATACAGAATGGGCATTGTGTGCATACTTGAAGCAGCGTCAGTTTAGCAAAAACTAGGCAACTGGGCGTAGCAATTTTGTCAACTGATGAGGGAACTCACG CCCGACTTTTGGAATTAGTTTGCCTGCAATTTGTAAAGTTGGCACATGAA CTTGTGATGCACCATTTGCAAATGCTCTTTTTTTGCTTACCGAAAACAGGACAACAGGTCAAGCTAGTAGATGGCAAATCATTTTTCTTGTCATGGTGACACAGGTTGCGCTAATGTCTTGATATATTAC]
[+] EMBL CB655627 [ CCGAGTTCGCCGCCTCCGCCTCCGCCTCCCGACGGCGGCAAGGCAACCGCTCGCGCCGCTGCCGCCTCGGCCCAACCAGCGCCTCCGTTCGCGCGTGTCCGGCCCTGCCGCGACGGCGGTGAGACTGCCATGGCCTCCTCCAAGCTCTACTCCGATGACGTCAGCCTCGCCGTCGTCGTCGTCGACACCAACCCCTTGTTCTGGGCCACCGCCGCCCTCCCCTTCGCCGACTTCTTCGCCCATCTGATCCACTACGTGAACTCGCTCTTGCTTCTGAACCACCTCAACCATGTGGTCGTCATCGCCGCGGGGCTTAGCTCTTGCACCTACATCTTCGACTCGAGCGATGCTAGTGCCTCTGGTGCTGCAGACGTCGCGGCCACCTTCGCAAAGGCGAGCCGCAAGATGGATGAGTTCATTGCAGAAGACGCCCGTGCCACTAGCAGCAATGGTTCCGTTGCTGATGGCAATGCAGCCTCTCTTCTCTCAGGCGCACTGTCCCTTGCTCTGTGCTATATACAGAGGGTTTTTCGGTCTGGTACTCGACATCCACAACCTCGGATTTTATGCCTGCAGGGTTCTCCAGATGGACCTGAACAATATGTAGCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCCCAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATAT AACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACTGATTTACACTCAAGA ]
[+] EMBL CB647216 [ CGAGTTCGCCGCCTCCGCCTCCGCCTCCCGACGGCGGCAAGGCAACCGCTCGCGCCGCCGCCGCCTCGGCCCAACCAGCGCCTCCGTTCGCGCGTGTCCGGCCCTGCCGCGACGGCGGTGAGACTGCCATGGCCTCCTCCAAGCTCTACTCCGATGACGTCAGCCTCGCCGTCGTCGTCGTCGACACCAACCCCTTGTTCTGGGCCACCGCCGCCCTCCCCTTCGCCGACTTCTTCGCCCATCTGATCCACTACGTGAACTCGCTCTTGCTTCTGAACCACCTCAACCATGTGGTCGTCATCGCCGCGGGGCTTAGCTCTTGCACCTACATCTTCGACTCGAGCGATGCTAGTGCCTCTGGTGCTGCAGACGTCGCGGCCACCTTCGCAAAGGCGAGCCGCAAGATGGATGAGTTCATTGCAGAAGACGCCCGTGCCACTAGCAGCAATGGTTCCGTTGCTGATGGCAATGCAGCCTCTCTTCTCTCAGGCGCACTGTCCCTTGCTCTGTGCTATATACAGAGGGTTTTTCGGTCTGGTACTCGACATCCACAACCTCGGATTTTATGCCTGCAGGGTTCTCCAGATGGACCTGAACAATATGTAGCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCCCAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATATAAACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACT ]
[+] EMBL CB685787 [ GCCCCTTCCGCCTCCGCCTCCCGACGGCGGCAAGGCAACCGCTCGCGCCGCCGCCGCCTCGGCCCAACCAGCGCCTCCGTTCGCGCGTGTCCGGCCCTGCCGCGACGGCGGTGAGACTGCCATGGCCTCCTCCAAGCTCTACTCCGATGACGTCAGCCTCGCCGTCGTCGTCGTCGACACCAACCCCTTGTTCTGGGCCACCGCCGCCCTCCCCTTCGCCGACTTCTTCGCCCATCTGATCCACTACGTGAACTCGCTCTTGCTTCTGAACCACCTCAACCATGTGGTCGTCATCGCCGCGGGGCTTAGCTCTTGCACCTACATCTTCGACTCGAGCGATGCTAGTGCCTCTGGTGCTGCAGACGTCGCGGCCACCTTCGCAAAGGCGAGCCGCAAGATGGATGAGTTCATTGCAGAAGACGCCCGTGCCACTAGCAGCAATGGTTCCGTTGCTGATGGCAATGCAGCCTCTCTTCTCTCAGGCGCACTGTCCCTTGCTCTGTGCTATATACAGAGGGTTTTTCGGTCTGGTACTCGACATCCACAACCTCGGATTTTATGCCTGCAGGGTTCTCCAGATGGACCTGAACAATATGTAGCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCCCAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATAT AACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACT ]
[+] EMBL CF309404 [ GCCTCTGGTGCTGCAGACGTCGCGGCCACCTTCGCAAAGGCGAGCCGCAAGATGGATGAGTTCATTGCAGAAGACGCCCGTGCCACTAGCAGCAATGGTTCCGTTGCTGATGGCAATGCAGCCTCTCTTCTCTCAGGCGCACTGTCCCTTGCTCTGTGCTATATACAGAGGGTTTTTCGGTCTGGTACTCGACATCCACAACCTCGGATTTTATGCCTGCAGGGTTCTCCAGATGGACCTGAACAATATGTAGCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCCCAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATAT AACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACTGATTTACACTCAAGAACCTTTCTGCGCCTCC ]
[+] EMBL CA763913 [ TGCTGATGGCAATGCAGCCTCTCTCCTCTCAGGCGCACTGTCCCTTGCTCTGTGCTATATACAGAGGGTTTTTCGGTCTGGTACTCGACATCCACAACCTCGGATTTTATGCCTGCAGGGTTCTCCTGATGGACCTGAACAATATGTAGCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCCCAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATAT AACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACTGATTTACACTCAAGAACCTTTCTGCGCCTCCCCAAGACTCTGGGAGTGGATTTCCGTGCTTCATGTTTCTGCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTCTGCAAGTATCATAAGAAGTGTTCGACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTCTGTACCTGATCAAAGGCAGTAGTCTACACTACAGATGGCGAAATATCAGACTGCAGACTTCTCTTTATGNTCTCCACAGGNTCAACTGATACAGAATGGGCATTGTGTGCATACTTGAAGCAGCGTCAGNTTAGCAAAAACTANGCAACTGGGCGTAGCAATTTTGTCAACTGATGANGGAACTCACGCCCCGACTTTGGGAA TAGTTTGNCTGCAA TTGGAAAGNTGGCACATGAACCTTGNGATGCACCATTTGCAAATGCTC TTTTTTGCTTAC ]
consensusID : consensus_12108#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 758 fasta sequence
[GCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCCCAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATATAACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACTGATTTACACTCAAGAACCTTTCTGCGCCTCCCCAAGACTCTGGGAGTGGATTTCCGTGCTTCATGTTTCTGCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTCTGCAAGTATCATAAGAAGTGTTCGACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTCTGTACCTGATCAAAGGCAGTAGTCTACACTACAGATGGCGAAATATCAGACTGCAGACTTCTCTTTATGTTCTCCACAGAATGGGCATTGTGTGCATACTTGAAGCAGCGTCAGTTTAGCAAAAACTAGGCAACTGGGCGTAGCAATTTTGTCAACTGATGAGGGAACTCACGCCCGACTTTTGGAATTAGTTTGCCTGCAATTTGTAAAGTTGGCACATGAACTTGTGATGCACCATTTGCAAATGCTCTTTTTTGCTTACCGAAAACAGGACAACAGGTCAAGCTAGTAGATGGCAAATCATTTTTCTTGTCATGGTGACACAGGTTGCGCTAATGTCTTGATATATTACTTGGAGCTCCAAGAACAATTTTGATTTTTAGTTTC]
[-] EMBL CB647217 [GCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCCCAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATATAACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACTGATTTACACTCAAGAACCTTTCTGCGCCTCCCCAAGACTCTGGGAGTGGATTTCCGTGCTTCATGTTTCTGCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTCTGCAAGTATCATAAGAAGTGTTCGACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTCTGTACCTGATCAAAGGCAGTAGTCTACACTACAGATGGCGAAATATCAGACTGCAGACTTCTCTTTATGTTCTCCACAGAATGGGCATTGTGTGCATACTTGAAGCAGCGTCAGTTTAGCAAAAACTAGGCAACTGGGCGTAGCAATTTTGTCAACTGATGAGGGAACTCACGCCCGACTTTTGGAATTAGTTTGCCTGCAATTTGTAAAGTTGGCACATGAACTTGTGATGCACCATTTGCAAATGCTCTTTTTTGCTTACCGAAAACAGGACAACAGGTCAAGCTAGTAGATGGCAAATCATTTTTCTTGTCATGGTGACACAGGTTGCGCTAATGTCTTGATATATTACTTGGAGCTCCAAGAACAATTTTGATTTTTAGTTTC]
consensusID : consensus_12108#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 748 fasta sequence
[TCTGGGAGTGGATTTCCGTGCTTCGTATGTGTCACTCAGTTTCCTCTATTAAGTTCTCTAGGCATTAGGCATATCTCTGTTTCTTCATCTTCTTGAATGCCTTGTGACATAGCTATGAGATGCTTGTTATAGATCTGAAAACATAGCATAATACCAATGACAATTTCAGAAAAATGTGAGAAACATACAGCTAATTTTTTTTGTGAAGTTCTATCTTACCAAAGGCCTTAGGTCAGGATTAGCAGCTCAGTTTATTTTTGTTTTTAAGTTTCCATTCAGTTTGTCTGATACTGGTGGCCTTTCAACTGCATCTAATTTGCTATATTTCTTTTCAGATGTTTCTGCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTCTGCAAGTATCATAAGAAGTGTTGGACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTTTGTCCCTGATCAAAGGCAGTAGTCTCCACTACAGATGGCGAAATATCAGACTGCAGACTTCTCTTTATGTTCTCCACAGAATGGGCATTGTGTGCATACTTGAAGCAGCGTCAGTTTAGCAAAAACTAGGCAACTGGGCGTAGCAATTTTGTCAACTGATGAGGGAACTCACGCCCGACTTTTGGAATTAGTTTGCCTGCAATTTGTAAAGTTGGCACATGAACTTGTGATGCCCCATTTGCAAATGCTCTTTTTTGCTTACGGAAAACAGGACAACAGGT]
[-] EMBL CB661058 [TCTGGGAGTGGATTTCCGTGCTTCGTATGTGTCACTCAGTTTCCTCTATTAAGTTCTCTAGGCATTAGGCATATCTCTGTTTCTTCATCTTCTTGAATGCCTTGTGACATAGCTATGAGATGCTTGTTATAGATCTGAAAACATAGCATAATACCAATGACAATTTCAGAAAAATGTGAGAAACATACAGCTAATTTTTTTTGTGAAGTTCTATCTTACCAAAGGCCTTAGGTCAGGATTAGCAGCTCAGTTTATTTTTGTTTTTAAGTTTCCATTCAGTTTGTCTGATACTGGTGGCCTTTCAACTGCATCTAATTTGCTATATTTCTTTTCAGATGTTTCTGCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTCTGCAAGTATCATAAGAAGTGTTGGACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTTTGTCCCTGATCAAAGGCAGTAGTCTCCACTACAGATGGCGAAATATCAGACTGCAGACTTCTCTTTATGTTCTCCACAGAATGGGCATTGTGTGCATACTTGAAGCAGCGTCAGTTTAGCAAAAACTAGGCAACTGGGCGTAGCAATTTTGTCAACTGATGAGGGAACTCACGCCCGACTTTTGGAATTAGTTTGCCTGCAATTTGTAAAGTTGGCACATGAACTTGTGATGCCCCATTTGCAAATGCTCTTTTTTGCTTACGGAAAACAGGACAACAGGT]
consensusID : consensus_12108#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 726 fasta sequence
[CATATATAACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACTGATTTACACTCAAGAACCTTTTTGCGCCTCCCCAAGACTTTGGGAGTGGATTTCCGTGCTTCATGTTTTTGCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTTTGCAAGTATCATAAGAAGTGTTTGACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTTTGTACCTGATCAAAGGCAGTAGTTTACACTACAGATGGGGAAATATCAGACTGCAGACTTTTTTTTATGTTTTCCACAGGAACATTTATCCTAGCATTTTAGCCTCAATGACATGCACATTTATTTTTTAGATACGATACATGATGCTGGATCAGCCTGTCCCTGATTTTGACAGGTTCAACTGATACAGAATGGGCATTGTGTGCATACTTGAAGCAGGGTCAGTTTAGCAAAAACTAGGCAACTGGGGGTAGCAATTTTGTCAACTGATGAGGGAACTCACGCCCGACTTTTGGAATTAGTTTGCCTGCAATTTGTAAAGTTGGCACATGAACTTGTGATGCACCATTTGCAAATGCTTTTTTTTGCTTACCGAAAACAGGACAACAGGTCAAGCTAGTAGATGGCAAATCATTTTTCTTGTCATGGTGACACAGGTTGCGCTAATGTCT]
[-] EMBL CB655628 [CATATATAACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACTGATTTACACTCAAGAACCTTTTTGCGCCTCCCCAAGACTTTGGGAGTGGATTTCCGTGCTTCATGTTTTTGCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTTTGCAAGTATCATAAGAAGTGTTTGACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTTTGTACCTGATCAAAGGCAGTAGTTTACACTACAGATGGGGAAATATCAGACTGCAGACTTTTTTTTATGTTTTCCACAGGAACATTTATCCTAGCATTTTAGCCTCAATGACATGCACATTTATTTTTTAGATACGATACATGATGCTGGATCAGCCTGTCCCTGATTTTGACAGGTTCAACTGATACAGAATGGGCATTGTGTGCATACTTGAAGCAGGGTCAGTTTAGCAAAAACTAGGCAACTGGGGGTAGCAATTTTGTCAACTGATGAGGGAACTCACGCCCGACTTTTGGAATTAGTTTGCCTGCAATTTGTAAAGTTGGCACATGAACTTGTGATGCACCATTTGCAAATGCTTTTTTTTGCTTACCGAAAACAGGACAACAGGTCAAGCTAGTAGATGGCAAATCATTTTTCTTGTCATGGTGACACAGGTTGCGCTAATGTCT]
consensusID : consensus_12108#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 336 fasta sequence
[AGAACCTTTTTGCGCCTCCCCAAGACTCTGGGAGTGGATTTCCGTGCTTCATGTTTCTCCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTATCCAAGTATCATAAGAAGTGTTTGGCCTGTGGGTCAGAATTCAACGGTGTCATCCCCGCGTTAAATTCTGTCCCTGATCAAAGGCAGTAGTGTACCCTGCAGATGGTGAAATATCAGATCGCAGGCTTGTCTTTATGTTCTCCGCAGGTTCAGCTGATGCAGAATGGCCATGGTGTGCATTCTTGAAGCAGGGTCAGTTTAGCAAAATCTTGGCAGTTGGGC]
[-] EMBL CB685788 [AGAACCTTTTTGCGCCTCCCCAAGACTCTGGGAGTGGATTTCCGTGCTTCATGTTTCTCCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTATCCAAGTATCATAAGAAGTGTTTGGCCTGTGGGTCAGAATTCAACGGTGTCATCCCCGCGTTAAATTCTGTCCCTGATCAAAGGCAGTAGTGTACCCTGCAGATGGTGAAATATCAGATCGCAGGCTTGTCTTTATGTTCTCCGCAGGTTCAGCTGATGCAGAATGGCCATGGTGTGCATTCTTGAAGCAGGGTCAGTTTAGCAAAATCTTGGCAGTTGGGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12108#0 CCGCAACTCCGCCGAGTTCGCCGCCTCCGCCTCCGCCTCCCGACGGCGGCAAGGCAACCG 60
consensus_12108#1 ------------------------------------------------------------
consensus_12108#3 ------------------------------------------------------------
consensus_12108#4 ------------------------------------------------------------
consensus_12108#2 ------------------------------------------------------------
consensus_12108#0 CTCGCGCCGCCGCCGCCTCGGCCCAACCAGCGCCTCCGTTCGCGCGTGTCCGGCCCTGCC 120
consensus_12108#1 ------------------------------------------------------------
consensus_12108#3 ------------------------------------------------------------
consensus_12108#4 ------------------------------------------------------------
consensus_12108#2 ------------------------------------------------------------
consensus_12108#0 GCGACGGCGGTGAGACTGCCATGGCCTCCTCCAAGCTCTACTCCGATGACGTCAGCCTCG 180
consensus_12108#1 ------------------------------------------------------------
consensus_12108#3 ------------------------------------------------------------
consensus_12108#4 ------------------------------------------------------------
consensus_12108#2 ------------------------------------------------------------
consensus_12108#0 CCGTCGTCGTCGTCGACACCAACCCCTTGTTCTGGGCCACCGCCGCCCTCCCCTTCGCCG 240
consensus_12108#1 ------------------------------------------------------------
consensus_12108#3 ------------------------------------------------------------
consensus_12108#4 ------------------------------------------------------------
consensus_12108#2 ------------------------------------------------------------
consensus_12108#0 ACTTCTTCGCCCATCTGATCCACTACGTGAACTCGCTCTTGCTTCTGAACCACCTCAACC 300
consensus_12108#1 ------------------------------------------------------------
consensus_12108#3 ------------------------------------------------------------
consensus_12108#4 ------------------------------------------------------------
consensus_12108#2 ------------------------------------------------------------
consensus_12108#0 ATGTGGTCGTCATCGCCGCGGGGCTTAGCTCTTGCACCTACATCTTCGACTCGAGCGATG 360
consensus_12108#1 ------------------------------------------------------------
consensus_12108#3 ------------------------------------------------------------
consensus_12108#4 ------------------------------------------------------------
consensus_12108#2 ------------------------------------------------------------
consensus_12108#0 CTAGTGCCTCTGGTGCTGCAGACGTCGCGGCCACCTTCGCAAAGGCGAGCCGCAAGATGG 420
consensus_12108#1 ------------------------------------------------------------
consensus_12108#3 ------------------------------------------------------------
consensus_12108#4 ------------------------------------------------------------
consensus_12108#2 ------------------------------------------------------------
consensus_12108#0 ATGAGTTCATTGCAGAAGACGCCCGTGCCACTAGCAGCAATGGTTCCGTTGCTGATGGCA 480
consensus_12108#1 ------------------------------------------------------------
consensus_12108#3 ------------------------------------------------------------
consensus_12108#4 ------------------------------------------------------------
consensus_12108#2 ------------------------------------------------------------
consensus_12108#0 ATGCAGCCTCTCTTCTCTCAGGCGCACTGTCCCTTGCTCTGTGCTATATACAGAGGGTTT 540
consensus_12108#1 ------------------------------------------------------------
consensus_12108#3 ------------------------------------------------------------
consensus_12108#4 ------------------------------------------------------------
consensus_12108#2 ---------------------------------------------------------TCT 3
consensus_12108#0 TTCGGTCTGGTACTCGACATCCACAACCTCGGATTTTATGCCTGCAGGGTTCTCCAGATG 600
consensus_12108#1 ------------------------------------------------------------
consensus_12108#3 ------------------------------------------------------------
consensus_12108#4 ------------------------------------------------------------
consensus_12108#2 GGGAGTGGATTTCCGTGCTTCGTATGTGTCACTCAGTTTCCTCTATTAAGTTCTCTAGGC 63
consensus_12108#0 GACCTGAACAATATGTAGCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCC 660
consensus_12108#1 -----------------GCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCC 43
consensus_12108#3 ------------------------------------------------------------
consensus_12108#4 ------------------------------------------------------------
consensus_12108#2 ATTAGGCATATCTCTGTTTCTTCATCTTCTTGAATGCCTTGTGACATAGCTATGAGATGC 123
consensus_12108#0 CAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATA 720
consensus_12108#1 CAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATA 103
consensus_12108#3 ------------------------------------------------------CATATA 6
consensus_12108#4 ------------------------------------------------------------
consensus_12108#2 TTGTTATAGATCTGAAAACATAGCATAATACCAATGACAATTTCAGAAAAATGTGAGAAA 183
consensus_12108#0 TA-ACAGGTGGAGTTTATT-TGAAACCCCAAGA-ACTAAATGGTCTATTTCAATACCTTG 777
consensus_12108#1 TA-ACAGGTGGAGTTTATT-TGAAACCCCAAGA-ACTAAATGGTCTATTTCAATACCTTG 160
consensus_12108#3 TA-ACAGGTGGAGTTTATT-TGAAACCCCAAGA-ACTAAATGGTCTATTTCAATACCTTG 63
consensus_12108#4 ------------------------------------------------------------
consensus_12108#2 CATACAGCTAATTTTTTTTGTGAAGTTCTATCTTACCAAAGGCCTTAGGTCAGGAT-TAG 242
consensus_12108#0 CTGCTGTATTTGCAACTGATTTACACTCAAGAACCTTTCTGCGCCTCCCCAA-GACTCTG 836
consensus_12108#1 CTGCTGTATTTGCAACTGATTTACACTCAAGAACCTTTCTGCGCCTCCCCAA-GACTCTG 219
consensus_12108#3 CTGCTGTATTTGCAACTGATTTACACTCAAGAACCTTTTTGCGCCTCCCCAA-GACTTTG 122
consensus_12108#4 -----------------------------AGAACCTTTTTGCGCCTCCCCAA-GACTCTG 30
consensus_12108#2 CAGCTCAGTTTATTTTTGTTTTTAAGTTTCCATTCAGTTTGTCTGATACTGGTGGCCTTT 302
* * * ** * * * *
consensus_12108#0 GGAGTGGATTT------CCGTGCTTC-------ATGTTTCTGCCATAAGAAGACTATTGA 883
consensus_12108#1 GGAGTGGATTT------CCGTGCTTC-------ATGTTTCTGCCATAAGAAGACTATTGA 266
consensus_12108#3 GGAGTGGATTT------CCGTGCTTC-------ATGTTTTTGCCATAAGAAGACTATTGA 169
consensus_12108#4 GGAGTGGATTT------CCGTGCTTC-------ATGTTTCTCCCATAAGAAGACTATTGA 77
consensus_12108#2 CAACTGCATCTAATTTGCTATATTTCTTTTCAGATGTTTCTGCCATAAGAAGACTATTGA 362
* ** ** * * * *** ****** * ******************
consensus_12108#0 CATGGGATATGTTTGTTCAGTTTGTTTATCGATATTCTGCAAGTATCATAAGAAGTGTTC 943
consensus_12108#1 CATGGGATATGTTTGTTCAGTTTGTTTATCGATATTCTGCAAGTATCATAAGAAGTGTTC 326
consensus_12108#3 CATGGGATATGTTTGTTCAGTTTGTTTATCGATATTTTGCAAGTATCATAAGAAGTGTTT 229
consensus_12108#4 CATGGGATATGTTTGTTCAGTTTGTTTATCGATATTATCCAAGTATCATAAGAAGTGTTT 137
consensus_12108#2 CATGGGATATGTTTGTTCAGTTTGTTTATCGATATTCTGCAAGTATCATAAGAAGTGTTG 422
************************************ * ********************
consensus_12108#0 GACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTCTGTACCTGATCAAAG 1003
consensus_12108#1 GACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTCTGTACCTGATCAAAG 386
consensus_12108#3 GACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTTTGTACCTGATCAAAG 289
consensus_12108#4 GGCCTGTGGGTCAGAATTCAACGGTGTCATCCCCGCGTTAAATTCTGTCCCTGATCAAAG 197
consensus_12108#2 GACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGACTTAAATTTTGTCCCTGATCAAAG 482
* ******************** ******* **** ******* *** ***********
consensus_12108#0 GCAGTAGTCTACACTACAGATGGCGAAATATCAGACTGCAGACTTCTCTTTATGTTCTCC 1063
consensus_12108#1 GCAGTAGTCTACACTACAGATGGCGAAATATCAGACTGCAGACTTCTCTTTATGTTCTCC 446
consensus_12108#3 GCAGTAGTTTACACTACAGATGGGGAAATATCAGACTGCAGACTTTTTTTTATGTTTTCC 349
consensus_12108#4 GCAGTAGTGTACCCTGCAGATGGTGAAATATCAGATCGCAGGCTTGTCTTTATGTTCTCC 257
consensus_12108#2 GCAGTAGTCTCCACTACAGATGGCGAAATATCAGACTGCAGACTTCTCTTTATGTTCTCC 542
******** * * ** ******* *********** **** *** * ******** ***
consensus_12108#0 ACAGG------------------------------------------------------- 1068
consensus_12108#1 AC---------------------------------------------------------- 448
consensus_12108#3 ACAGGAACATTTATCCTAGCATTTTAGCCTCAATGACATGCACATTTATTTTTTAGATAC 409
consensus_12108#4 GCAGG------------------------------------------------------- 262
consensus_12108#2 AC---------------------------------------------------------- 544
*
consensus_12108#0 -----------------------------------------TTCAACTGATACAGAATGG 1087
consensus_12108#1 -----------------------------------------------------AGAATGG 455
consensus_12108#3 GATACATGATGCTGGATCAGCCTGTCCCTGATTTTGACAGGTTCAACTGATACAGAATGG 469
consensus_12108#4 -----------------------------------------TTCAGCTGATGCAGAATGG 281
consensus_12108#2 -----------------------------------------------------AGAATGG 551
*******
consensus_12108#0 GCATTGTGTGCATACTTGAAGCAGCGTCAGTTTAGCAAAAACTAGGCAACTGGGCGTAGC 1147
consensus_12108#1 GCATTGTGTGCATACTTGAAGCAGCGTCAGTTTAGCAAAAACTAGGCAACTGGGCGTAGC 515
consensus_12108#3 GCATTGTGTGCATACTTGAAGCAGGGTCAGTTTAGCAAAAACTAGGCAACTGGGGGTAGC 529
consensus_12108#4 CCATGGTGTGCATTCTTGAAGCAGGGTCAGTTTAGCAAAATCTTGGCAGTTGGGC----- 336
consensus_12108#2 GCATTGTGTGCATACTTGAAGCAGCGTCAGTTTAGCAAAAACTAGGCAACTGGGCGTAGC 611
*** ******** ********** *************** ** **** ****
consensus_12108#0 AATTTTGTCAACTGATGAGGGAACTCACGCCCGACTTTTGGAATTAGTTTGCCTGCAATT 1207
consensus_12108#1 AATTTTGTCAACTGATGAGGGAACTCACGCCCGACTTTTGGAATTAGTTTGCCTGCAATT 575
consensus_12108#3 AATTTTGTCAACTGATGAGGGAACTCACGCCCGACTTTTGGAATTAGTTTGCCTGCAATT 589
consensus_12108#4 ------------------------------------------------------------
consensus_12108#2 AATTTTGTCAACTGATGAGGGAACTCACGCCCGACTTTTGGAATTAGTTTGCCTGCAATT 671
consensus_12108#0 TGTAAAGTTGGCACATGAACTTGTGATGCACCATTTGCAAATGCTCTTTTTTTGCTTACC 1267
consensus_12108#1 TGTAAAGTTGGCACATGAACTTGTGATGCACCATTTGCAAATGCTCTTTTTT-GCTTACC 634
consensus_12108#3 TGTAAAGTTGGCACATGAACTTGTGATGCACCATTTGCAAATGCTTTTTTTT-GCTTACC 648
consensus_12108#4 ------------------------------------------------------------
consensus_12108#2 TGTAAAGTTGGCACATGAACTTGTGATGCCCCATTTGCAAATGCTCTTTTTT-GCTTACG 730
consensus_12108#0 GAAAACAGGACAACAGGTCAAGCTAGTAGATGGCAAATCATTTTTCTTGTCATGGTGACA 1327
consensus_12108#1 GAAAACAGGACAACAGGTCAAGCTAGTAGATGGCAAATCATTTTTCTTGTCATGGTGACA 694
consensus_12108#3 GAAAACAGGACAACAGGTCAAGCTAGTAGATGGCAAATCATTTTTCTTGTCATGGTGACA 708
consensus_12108#4 ------------------------------------------------------------
consensus_12108#2 GAAAACAGGACAACAGGT------------------------------------------ 748
consensus_12108#0 CAGGTTGCGCTAATGTCTTGATATATTAC------------------------------- 1356
consensus_12108#1 CAGGTTGCGCTAATGTCTTGATATATTACTTGGAGCTCCAAGAACAATTTTGATTTTTAG 754
consensus_12108#3 CAGGTTGCGCTAATGTCT------------------------------------------ 726
consensus_12108#4 ------------------------------------------------------------
consensus_12108#2 ------------------------------------------------------------
consensus_12108#0 ----
consensus_12108#1 TTTC 758
consensus_12108#3 ----
consensus_12108#4 ----
consensus_12108#2 ----
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||