|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12111#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1014 fasta sequence
[TTTTTTTTTTTTTTTTTTTTTTTTCTCACGAATCATTAATTTATTCAGCAATTCTGCACAGCACAAAAAAACACACATTGAAGTAATTAATGTTGCAATTCCAATATTCCAGGAACTTGCCAACATTCTTGGGGAAATTCATCAGGCCCCATACCAAAATACAGCTATAAATTATAATTTTAAACTGAAAAACTCCTACCAACAGAAATGAAAAAAAAAAAGTTTGGCAAATGCCCCTGACTGAATTGAATGTAAATTGATTTAACAGTAAAACGCCAAAGCAAGTACAGATCTCATCAGTGGCTACGGATCAACAAACTACACATTCAAAAAAACAAGTTTCAGGAGTTGCTAGGAATGACATTAAAGAAGTGGTAAACTTCATCTTCATCAAACACTCCAACCTCAGTTGAGCAAACCTCACAACAAACAGGGTGATAAACTGCACCCTTCTTTTCACCTTCTGATGTAGTAGAAGAATCAGCAGCCTTTCCCTTGCGGTTTTTCCGTTTGCCTTTCCCCTCCCGTAAAATCTGATCAGTCTTGACCTTGCAGTTGCGAACGAACATTGCACGGTACTGATTTACATACGTCTCATGCCTGAACATCAAAGAAAGCCACTACAGTTAATAATTGTCTGAAGATTTGAAGCATTCAAAGTAAGAACTTCAGGAGTTTCTGAACATTGTGCAAATGAAAACAACAGCATAATGTTTCACGATATAAAATGATTACTGAAAGAATTGCAAATAGGTCACATAAACTTGCCTCCAGATTTTTTTTCCCACAAATCTAGATTTCTCAATTTTGTATTAAAAAATTGGACATGCTCAGTACAATCAAGTCATATAATTGCATATTCTGGAGAGGAAAATGATCAAGCACAGTATATGGTTACCAACACAAGTTCCAAGCAGGTTTTATTTTAGTTTCAAACCAAAGTAAGTTTCATGAAGATTTCAGACTTTCAAGGTGGATAATTCAATTTACAAAGCAGGTTACAAATAAGTCATC]
[+] EMBL CF330020 [TTTTTTTTTTTTTTTTTTTTTTTTCTCACGAATCATTAATTTATTCAGCAATTCTGCACAGCACAAAAAAACACACATTGAAGTAATTAATGTTGCAATTCCAATATTCCAGGAACTTGCCAACATTCTTGGGGAAATTCATCAGGCCCCATACCAAAATACAGCTATAAATTATAATTTTAAACTGAAAAACTCCTACCAACAGAAATGAAAAAAAAAAAGTTTGGCAAATGCCCCTGACTGAATTGAATGTAAATTGATTTAACAGTAAAACGCCAAAGCAAGTACAGATCTCATCAGTGGCTACGGATCAACAAACTACACATTCAAAAAAACAAGTTTCAGGAGTTGCTAGGAATGACATTAAAGAAGTGGTAAACTTCATCTTCATCAAACACTCCAACCTCAGTTGAGCAAACCTCAC ]
[+] EMBL CB619288 [ GTAGATTGATTTAACAGTAGAACGCCAAAGCAAGTACAGATCTCATCAGTGGCTACGGATCAACAAACTACACATTCAGAAGAACAAGTTTCAGGAGTTGCTAGGAATGACATTAAAGAAGTGGTAAACTTCATCTTCATCAAACACTCCAACCTCAGTTGAGCAAACCTCACAACAAACAGGGTGATAAACTGCACCCTTCTTTTCACCTTCTGATGTAGTAGAAGAATCAGCAGCCTTTCCCTTGCGGTTTTTCCGTTTGCCTTTCCCCTCCCGTAAAATCTGATCAGTCTTGACCTTGCAGTTGCGAACGAACATTGCACGGTACTGATTTACATACGTCTCATGCCTGAACATCAAAGAAAGCCACTACAGTTAATAATTGTCTGAAGATTTGAAGCATTCAAAGTAAGAACTTCAGGAGTTTCTGAACATTGTGCAAATGAAAACAACAGCATAATGTTTCACGATATAAAATGATTACTGAAAGAATTGCAAATAGGTCACATAAACTTGCCTCCAGATTTTTTTTCCCACAAATCTAGATTTCTCAATTTTGTATTAAAAAATTGGACATGCTCAGTACAATCAAGTCATATAATTGCATATTCTGGAGAGGAAAATGATCAAGCACAGTATATGGTTACCAACACAAGTTCCAAGCAGGTTTTATTTTAGTTTCAAACCAAAGTAAGTTTCATGAAGATTTCAGACTTTCAAGGTGGATAATTCAATTTACAAAGCAGGTTACAAATAAGTCATC]
consensusID : consensus_12111#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 799 fasta sequence
[GAAGGCCGGAGAAGCGGAAGCGAGAGCGCACGGCGGAGGCGAGGAGGGTTTCATGGAGCCCGAGAAATCCAAAGAGGCGGCGAGCCAGCCGATGGAGGCGGACGCCGGCGGCCCCGTCGATCCCCGAGAACTAGGTAGCTCTCCCAATCCCCCCCTTGCTTTAGATGGCTAAAATCTTTCATGCGAACCCCTTTTGCTTCCTCCTCCAAGAACCGGAAGTATATATAAATCGTGCAGGAAATGGGAGATGCCTGACGTGTCCTGACTGATGCACCTGATTTCCCCTCTTTTGGTTTTGTGTTACCTCTGAATTTGTTAGTGTCCAGCGACGATGAGATAGATTACTCCGTGGAGCCCGAGTTCTACGATCCCGACCTGGATGATGTCGATGAGCGGTGGGTGAGCAAGCAGAGGAAAGGGAGGACTTCTGACGCCGTGCTCAGCTGCCCCGCGTGCTTCACTACCTTGTGCCTGGATTGCCAGAGGTTGTCTTTCCTTACTGCTTCGAACTCTGTGAGGAGGCTTCTGGATTCCAATATGCATGTTTATTAAGCAGTCACTAGTTCTTTTTAGATTAGTCGATTTACTATTTTTAGTTCTTGGATTGGCACGATGCTTTTCCTGATGATGAAGAAACTATCAGGATTGTGGTGCTGCTGCCTGTATAGGGTAGATGCTATCAATAATTTTGTTTGGAGAAGTTGGTGTATGTTAGACCATGAGGAGTATATCTATACATGTGAGCAAATCTTTTGCATACAATCGACATCCATGCTCACAATGATCAAATTGGTTGATT]
[+] EMBL CB619287 [GAAGGCCGGAGAAGCGGAAGCGAGAGCGCACGGCGGAGGCGAGGAGGGTTTCATGGAGCCCGAGAAATCCAAAGAGGCGGCGAGCCAGCCGATGGAGGCGGACGCCGGCGGCCCCGTCGATCCCCGAGAACTAGGTAGCTCTCCCAATCCCCCCCTTGCTTTAGATGGCTAAAATCTTTCATGCGAACCCCTTTTGCTTCCTCCTCCAAGAACCGGAAGTATATATAAATCGTGCAGGAAATGGGAGATGCCTGACGTGTCCTGACTGATGCACCTGATTTCCCCTCTTTTGGTTTTGTGTTACCTCTGAATTTGTTAGTGTCCAGCGACGATGAGATAGATTACTCCGTGGAGCCCGAGTTCTACGATCCCGACCTGGATGATGTCGATGAGCGGTGGGTGAGCAAGCAGAGGAAAGGGAGGACTTCTGACGCCGTGCTCAGCTGCCCCGCGTGCTTCACTACCTTGTGCCTGGATTGCCAGAGGTTGTCTTTCCTTACTGCTTCGAACTCTGTGAGGAGGCTTCTGGATTCCAATATGCATGTTTATTAAGCAGTCACTAGTTCTTTTTAGATTAGTCGATTTACTATTTTTAGTTCTTGGATTGGCACGATGCTTTTCCTGATGATGAAGAAACTATCAGGATTGTGGTGCTGCTGCCTGTATAGGGTAGATGCTATCAATAATTTTGTTTGGAGAAGTTGGTGTATGTTAGACCATGAGGAGTATATCTATACATGTGAGCAAATCTTTTGCATACAATCGACATCCATGCTCACAATGATCAAATTGGTTGATT]
[+] EMBL CF305133 [ AGAAGCGGAAGCGAGAGCGCACGGCGGAGGCGAGGAGGGTTTCATGGAGCCCGAGAAATCCAAAGAGGCGGCGAGCCAGCCGATGGAAGCGGACGCCGGCGGCCCCGTCGATCCCCGAGAACTAGGTAGCTCTCCCAATCCCCCCCTTGCTTTAGATGGCTAAAATCTTTCATGCGAACCCCTTTTGCTTCCTCCTCCAAGAACCGGAAGTATATATAAATCGTGCAGGAAATGGGAGATGCCTGACGTGTCCTGACTGATGCACCTGATTTCCCCTCTTTTGGTTTTGTGTTACCTCTGAATTTGTTAGTGTCCAGCGACGATGAGATAGATTACTCCGTGGAGCCCGAGTTCTACGATCCCGACCTGGATGATGTCGATGAGCGGTGGGTGAGCAAGCAGAGGAAAGGGAGGACTTCTGACGCC ]
consensusID : consensus_12111#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 723 fasta sequence
[TTTTTTTTTTTTGAAGTAATTAATGTTGCAATTCCAATATTCCAGGAACTTGCCAACATTCTTGGTGAAATTCATCAGGCCCCATACCAGAATACAGCTATAAATTATAATTTTAGACTGAAGAACTCCTAGCAACAGAAATGAAAAAAAAAAAGTATGGCAAATGCACCTGACTGAATTGAATGTAGATTGATTTAACAGTAGAACGCCAAAGCAAGTACAGATCTCATCAGTGGCTACGGATCAACAAACTCACAACAAACAGGGTGATAAACTGCACCCTTCTTTTCACCTTCTGATGTAGTAGAAGAATCAGCAGCCTTTCCCTTGCGGNTTTTCCGTTTGCCTTTCCCCTCCCGTAGAATCTGATCAGTCTTGACCTTGCAGTTGCGAACGAACATTGCACGGTACTGATTTACATACGTCTCATGCCTCTGGCAATCCAGGCACAAGGT-AGTG-AAGCACGCGGGGCAGCTGAGCACGGCGTCAGAAGTCCTCCCTTTCCTCTGCTTGCTCACCCACCGCTCATCGACATCATNCAGGTCGGGATCGTAGAACTCGGGCTCCACGGAGTAATCTATCTCATCGTCGCTGGACACTAGTTCTCGNGGATCGACGGGGCCGCCGGCGTCCGCTTCCATCGGCTGGCTCGCCGCCTCTTTGGATATCTCGGGCTCCATGAAACCCTCCTCGCCTCCGCCGTGCGCTCTCGCTTCCGCTTCT]
[-] EMBL AU101018 [TTTTTTTTTTTTGAAGTAATTAATGTTGCAATTCCAATATTCCAGGAACTTGCCAACATTCTTGGTGAAATTCATCAGGCCCCATACCAGAATACAGCTATAAATTATAATTTTAGACTGAAGAACTCCTAGCAACAGAAATGAAAAAAAAAAAGTATGGCAAATGCACCTGACTGAATTGAATGTAGATTGATTTAACAGTAGAACGCCAAAGCAAGTACAGATCTCATCAGTGGCTACGGATCAACAAACTCACAACAAACAGGGTGATAAACTGCACCCTTCTTTTCACCTTCTGATGTAGTAGAAGAATCAGCAGCCTTTCCCTTGCGGNTTTTCCGTTTGCCTTTCCCCTCCCGTAGAATCTGATCAGTC ]
[-] EMBL CF330019 [ AAGAATCAGCAGCCTTTCCCTTGCGGTTTTTCCGTTTGCCTTTCCCCTCCCGTAGAATCTGATCAGTCTTGACCTTGCAGTTGCGAACGAACATTGCACGGTACTGATTTACATACGTCTCATGCCTCTGGCAATCCAGGCACAAGGT AGTG AAGCACGCGGGGCAGCTGAGCACGGCGTCAGAAGTCCTCCCTTTCCTCTGCTTGCTCACCCACCGCTCATCGACATCATNCAGGTCGGGATCGTAGAACTCGGGCTCCACGGAGTAATCTATCTCATCGTCGCTGGACACTAGTTCTCGNGGATCGACGGGGCCGCCGGCGTCCGCTTCCATCGGCTGGCTCGCCGCCTCTTTGGATATCTCGGGCTCCATGAAACCCTCCTCGCCTCCGCCGTGCGCTCTCGCTTCCGCT ]
[-] EMBL C28721 [ GGCAATCNAGGCACAAGGTAAGTGAAAGCACGCGGGGCAGCTGAGCACGGCGTCAGAAGTCCTCCCTTTCCTCTGCTTGCTCACCCACCGCTCATCGACATCATCCAGGTCGGGATCGTAGAACTCGGGCTCCACGGAGTAATCTATCTCATCGTCGCTGGACACTAGTTCTCGGGGATCGACGGGGCCGCCGGCGTCCGCTTCCATCGGCTGGCTCGCCGCCTCTTTGGATTTCTCGGGCTCCATGAAACCCTCCTCGCCTCCGCCGTNGGCTCTC CTTCCGCTTCT]
consensusID : consensus_12111#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 711 fasta sequence
[TTTTTAATTAATGTTGCAATTCCAATATTCCAGGAACTTGCCAACATTCTTGGTGAAATTCATCAGGCCCCATACCAGAATACAGCTATAAATTATAATTTTAGACTGAAGAACTCCTAGCAACAGAAATGAAAAAAAAAAGTATGGCAAATGCACCTGACTGAATTGAATGTAGATTGATTTAACAGTAGAACGCCAAAGCAAGTACAGATCTCATCAGTGGCTACGGATCAACAAACTACACATTCAGAAGAACAAGTTTCAGGAGTTGCTAGGAATGACATTAAAGAAGTGGTAAACTTCATCTTCATCAAACACTCCAACCTCAGTTGAGCAAACCTNACAACAAACAGGGTGATAAACTGCACCCTTCTTTTCACCTTCTGATGTAGTAGAAGAATCAGCAGCCTTTCCCTTGCGGTTTTTCCGTTTGCCTTTCCCCTCCCGTAGAATCTGATCAGTCTTGACCTTGCAGTTGCGAACGAACATTGCACGGTACTGATTTACATACGTCTCATGCCTCTGGCAATCCAGGCACAAGGTAGTGAAGCACGCCGGGGCAACTGAGCACGGCGTCAGAAGTCCTCCCTTTCCTCTGCTTGCTCACCCACCGCTCATCGACATCATCCAGGTCGGGATCGTAGAACTCGGGTCCACGGAGAAATCTATCTCATCGTCGCTGAACACTAACAAATTCAAAAGTAACACAAA]
[-] EMBL AU093072 [TTTTTAATTAATGTTGCAATTCCAATATTCCAGGAACTTGCCAACATTCTTGGTGAAATTCATCAGGCCCCATACCAGAATACAGCTATAAATTATAATTTTAGACTGAAGAACTCCTAGCAACAGAAATGAAAAAAAAAAGTATGGCAAATGCACCTGACTGAATTGAATGTAGATTGATTTAACAGTAGAACGCCAAAGCAAGTACAGATCTCATCAGTGGCTACGGATCAACAAACTACACATTCAGAAGAACAAGTTTCAGGAGTTGCTAGGAATGACATTAAAGAAGTGGTAAACTTCATCTTCATCAAACACTCCAACCTCAGTTGAGCAAACCTNACAACAAACAGGGTGATAAACTGCACCCTTCTTTTCACCTTCTGATGTAGTAGAAGAATCAGCAGCCTTTCCCTTGCGGTTTTTCCGTTTGCCTTTCCCCTCCCGTAGAATCTGATCAGTCTTGACCTTGCAGTTGCGAACGAACATTGCACGGTACTGATTTACATACGTCTCATGCCTCTGGCAATCCAGGCACAAGGTAGTGAAGCACGCCGGGGCAACTGAGCACGGCGTCAGAAGTCCTCCC ]
[-] EMBL D42285 [ acGTACTGATTTACATACGTCTCA CTCTGGCAATCCAGGCACAAGGTAGTGAAGCA CCGGGGCAGCTGAGCACGGCGTCAGAAGTCCTCCCTTTCCTCTGCTTGCTCACCCACCGCTCATCGACATCATCCAGGTCGGGATCGTAGAACTCGGGTCCACGGAGAAATCTATCTCATCGTCGCTGAACACTAACAAATTCAAAAGTAACACAAA]
consensusID : consensus_12111#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 356 fasta sequence
[AGCGGAAGTGNANNNAACGGCGANGGGANGGAGGGTTTCATGGAGCCCGAGAAATCCAAAGAGGCGGCGACAGCCAATGGAAGCGGACNCGGCNGCCCGTCGNTCCCCGAGAACTAGTGTCCAGCGACGATGAGATAGATTACTCCGTNGAGCCCGAGTTCTACGATCCCGACCTGGATGATGTCGATGAGCGGTGGGTNAGCAAGCAGAGGAAAGGGAGGACTTCTGACGCCGTGCTCAGCTGCCCCGCGTGCTTCACTACCTTGTNCCTGGATTGCCAGACNTTGAAGACGTATGTAAATCAGTACCGTGCAATGTTCGTTCGCAACTTCAAAGGTCAAGACTNATCAGATTCT]
[+] EMBL C97806 [AGCGGAAGTGNANNNAACGGCGANGGGANGGAGGGTTTCATGGAGCCCGAGAAATCCAAAGAGGCGGCGACAGCCAATGGAAGCGGACNCGGCNGCCCGTCGNTCCCCGAGAACTAGTGTCCAGCGACGATGAGATAGATTACTCCGTNGAGCCCGAGTTCTACGATCCCGACCTGGATGATGTCGATGAGCGGTGGGTNAGCAAGCAGAGGAAAGGGAGGACTTCTGACGCCGTGCTCAGCTGCCCCGCGTGCTTCACTACCTTGTNCCTGGATTGCCAGACNTTGAAGACGTATGTAAATCAGTACCGTGCAATGTTCGTTCGCAACTTCAAAGGTCAAGACTNATCAGATTCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12111#2 ------------------------------------------------------------
consensus_12111#3 ------------------------------------------------------------
consensus_12111#0 TTTTTTTTTTTTTTTTTTTTTTTTCTCACGAATCATTAATTTATTCAGCAATTCTGCACA 60
consensus_12111#1 ----------------------------------------GAAGGCCGGAGAAGCGGAAG 20
consensus_12111#4 ------------------------------------------------------------
consensus_12111#2 -------TTTTTTTTTTTTGAAGTAATTAATGTTGCAATTCCAATATTCCAGGAACTTGC 53
consensus_12111#3 ---------------TTTT----TAATTAATGTTGCAATTCCAATATTCCAGGAACTTGC 41
consensus_12111#0 GCACAAAAAAACACACATTGAAGTAATTAATGTTGCAATTCCAATATTCCAGGAACTTGC 120
consensus_12111#1 CGAGAGCGCACGGCGGAGGCGAGGAGGGTTTCATGGAGCCCGAGAAATCCAAAGAGGCGG 80
consensus_12111#4 ------------------------------------------------------------
consensus_12111#2 CAACATTCTTGGTGAAATTCATCAGGCCCCATACCAGAATACAGCTATAAATTATAATTT 113
consensus_12111#3 CAACATTCTTGGTGAAATTCATCAGGCCCCATACCAGAATACAGCTATAAATTATAATTT 101
consensus_12111#0 CAACATTCTTGGGGAAATTCATCAGGCCCCATACCAAAATACAGCTATAAATTATAATTT 180
consensus_12111#1 CGAGCCAGCCGATGGAGGCGGAC-GCCGGCGGCCCCGTCGATCCCCGAGAACTAGGTAGC 139
consensus_12111#4 ------------------------------------------------------------
consensus_12111#2 TAGACTGAAGAACTCCTAGCAACAGAAATGAAAAAAAAAAAGTATGGCAAATGCACCTGA 173
consensus_12111#3 TAGACTGAAGAACTCCTAGCAACAGAAATGAAAAAAAAAA-GTATGGCAAATGCACCTGA 160
consensus_12111#0 TAAACTGAAAAACTCCTACCAACAGAAATGAAAAAAAAAAAGTTTGGCAAATGCCCCTGA 240
consensus_12111#1 TCTCCCAATCCCCCCCTTGCTTTAG--ATGGCTAAAATCTTTCATGCGAACCCCTTTTGC 197
consensus_12111#4 ------------------------------------------------------------
consensus_12111#2 CTGAATTGAATGTAGATTGATTTAACAGTAGAACGCCAAAGCAAGTACAGATCT-CATCA 232
consensus_12111#3 CTGAATTGAATGTAGATTGATTTAACAGTAGAACGCCAAAGCAAGTACAGATCT-CATCA 219
consensus_12111#0 CTGAATTGAATGTAAATTGATTTAACAGTAAAACGCCAAAGCAAGTACAGATCT-CATCA 299
consensus_12111#1 TTCCTCCTCCAAGAACCGGAAGTATATATAAATCGTGCAGGAAATGGGAGAT-------G 250
consensus_12111#4 --------------AGCGGAAGTGNANNNAA-CGGCGANGGGANGGAGGGTTTCATGGAG 45
** * * * * * * *
consensus_12111#2 GTGGCTACGGATCAACAAACT--------------------------------------- 253
consensus_12111#3 GTGGCTACGGATCAACAAACTACACATTCAGAAGAACAAGTTTCAGGAGTTGCTAGGAAT 279
consensus_12111#0 GTGGCTACGGATCAACAAACTACACATTCAAAAAAACAAGTTTCAGGAGTTGCTAGGAAT 359
consensus_12111#1 CCTGACGTGTCCTGACTGATG----CACCTGATTTCCCCTCTTTTGGTTTTGTGTTACCT 306
consensus_12111#4 CCCGAGAAATCCAAAGAGGCGGCGACAGCCAATGGAAGCGGACNCGGCNGCCCGTCGNTC 105
* *
consensus_12111#2 ------------------------------------------------------------
consensus_12111#3 GACATTAAAGAAGTGGTAAACTTCATCTTCATCAAACACTCCAACCTCAGTTGAGCAAAC 339
consensus_12111#0 GACATTAAAGAAGTGGTAAACTTCATCTTCATCAAACACTCCAACCTCAGTTGAGCAAAC 419
consensus_12111#1 CTGAATTTGTTAGTGTCCAGCGACGATGAGATAGATTACTCC-------GTGGAG----- 354
consensus_12111#4 CCCGAGA-ACTAGTGTCCAGCGACGATGAGATAGATTACTCC-------GTNGAG----- 152
consensus_12111#2 --CACAACAAACAGGGTGATAAACTGCACCCTTCTTTTCACCTTCTGATGTAGTAGAAGA 311
consensus_12111#3 CTNACAACAAACAGGGTGATAAACTGCACCCTTCTTTTCACCTTCTGATGTAGTAGAAGA 399
consensus_12111#0 CTCACAACAAACAGGGTGATAAACTGCACCCTTCTTTTCACCTTCTGATGTAGTAGAAGA 479
consensus_12111#1 --CCCGAGTTCTACGATCCCGACCTGGATGATGTCGATGAGCGGTGGGTGAGCAAGCAGA 412
consensus_12111#4 --CCCGAGTTCTACGATCCCGACCTGGATGATGTCGATGAGCGGTGGGTNAGCAAGCAGA 210
* * * * * * *** * * * * * * * ** ***
consensus_12111#2 ATCAGCAGCCTTTCCCTTGCGGNTTTTCCGTTTGCCTTTCCCCTCCCGTAGAATCTGATC 371
consensus_12111#3 ATCAGCAGCCTTTCCCTTGCGGTTTTTCCGTTTGCCTTTCCCCTCCCGTAGAATCTGATC 459
consensus_12111#0 ATCAGCAGCCTTTCCCTTGCGGTTTTTCCGTTTGCCTTTCCCCTCCCGTAAAATCTGATC 539
consensus_12111#1 GGAAAGGGAGGACTTCTGACGCCGTGCTCAGCTGCCCCGCGTGCTTCACTACCTTGTGCC 472
consensus_12111#4 GGAAAGGGAGGACTTCTGACGCCGTGCTCAGCTGCCCCGCGTGCTTCACTACCTTGTNCC 270
* * ** ** * * **** * * * *
consensus_12111#2 AGTCTTGACCTTGCAGTTGCGAACGAACATTGCACGGTACTGATTTACATACGTCTCATG 431
consensus_12111#3 AGTCTTGACCTTGCAGTTGCGAACGAACATTGCACGGTACTGATTTACATACGTCTCATG 519
consensus_12111#0 AGTCTTGACCTTGCAGTTGCGAACGAACATTGCACGGTACTGATTTACATACGTCTCATG 599
consensus_12111#1 TGGATTG--CCAGAGGTTGTCTTTCCTTACTGCTTCGAACTCTGTGAGGAGGCTTCTGGA 530
consensus_12111#4 TGGATTG--CCAGACNTTGAAGACGTATGTAAATCAGTACCGTGCAATGTTCGTTCGCAA 328
* *** * * *** * ** * *
consensus_12111#2 CCTC--TGGCAATCCAGGCACAAGGTAGTGAAGCAC-GC-GGGGCAGCTGA-GCA--CGG 484
consensus_12111#3 CCTC--TGGCAATCCAGGCACAAGGTAGTGAAGCAC-GCCGGGGCAACTGA-GCA--CGG 573
consensus_12111#0 CCTGAACATCAAAGAAAGC-CACTACAGTTAATAATTGTCTGAAGATTTGAAGCATTCAA 658
consensus_12111#1 TTCCAATATGCATGTTTATTAAGCAGTCACTAGTTCTTTTTAGATTAGTCGATTTACTAT 590
consensus_12111#4 CTTCAAAGGTCAAG---ACTNATCAGATTCT----------------------------- 356
* *
consensus_12111#2 CGTCAGAAGTCCTCCCTTTCCTCTGC-TTGCTCA--------------CCCACCGCTCAT 529
consensus_12111#3 CGTCAGAAGTCCTCCCTTTCCTCTGC-TTGCTCA--------------CCCACCGCTCAT 618
consensus_12111#0 AGTAAGAACTTCAGGAGTTTCTGAACATTGTGCAAATGAAAACAACAGCATAATGTTTCA 718
consensus_12111#1 TTTTAGTTCTTGGATTGGCACGATGCTTTTCCTGATGATGAAGAAACTATCAGGATTGTG 650
consensus_12111#4 ------------------------------------------------------------
consensus_12111#2 CGACATCATNCAGGT--CGGGATCGTAGAACTCGGGCTCCACGGAGTAATCT----ATCT 583
consensus_12111#3 CGACATCATCCAGGT--CGGGATCGTAGAACTCGGG-TCCACGGAGAAATCT----ATCT 671
consensus_12111#0 CGATATAAAATGATTACTGAAAGAATTGCAAATAGGTCACATAAACTTGCCTCCAGATTT 778
consensus_12111#1 GTGCTGCTGCCTGTATAGGGTAGATGCTATCAATAATTTTGTTTGGAGAAGTTGGTGTAT 710
consensus_12111#4 ------------------------------------------------------------
consensus_12111#2 CATCGTCGCTGGACACTAGTTCTCGNGGATCG----ACGGGGCCGCCGGCGTCCGCTTCC 639
consensus_12111#3 CATCGTCGCTGAACACTAAC-----AAATTCA----AAAGTAACACAAA----------- 711
consensus_12111#0 TTTTTCCCACAAATCTAGATTTCTCAATTTTGTATTAAAAAATTGGACATGCTCAGTACA 838
consensus_12111#1 GTTAGACCATGAGGAGTATATCTATACATGTGAGCAAATCTTTTGCATACAATCGACATC 770
consensus_12111#4 ------------------------------------------------------------
consensus_12111#2 ATCGGCTGGC-TCGCCGCCTCTT-TGGATATCTCGGGCTCCATGAAACCCTCCTCGCCTC 697
consensus_12111#3 ------------------------------------------------------------
consensus_12111#0 ATCAAGTCATATAATTGCATATTCTGGAGAGGAAAATGATCAAGCACAGTATATGGTTAC 898
consensus_12111#1 CATGCTCACAATGATCAAATTGGTTGATT------------------------------- 799
consensus_12111#4 ------------------------------------------------------------
consensus_12111#2 CGCCGTGCGCTCTCGCTTCCGCTTCT---------------------------------- 723
consensus_12111#3 ------------------------------------------------------------
consensus_12111#0 CAACACAAGTTCCAAGCAGGTTTTATTTTAGTTTCAAACCAAAGTAAGTTTCATGAAGAT 958
consensus_12111#1 ------------------------------------------------------------
consensus_12111#4 ------------------------------------------------------------
consensus_12111#2 --------------------------------------------------------
consensus_12111#3 --------------------------------------------------------
consensus_12111#0 TTCAGACTTTCAAGGTGGATAATTCAATTTACAAAGCAGGTTACAAATAAGTCATC 1014
consensus_12111#1 --------------------------------------------------------
consensus_12111#4 --------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||