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Oryza sativa
cluster # 12115 cluster # 12115       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12115#0 length = 1351 sequences # 9  
consensus_12115#1 length = 694 sequences # 1  

consensusID : consensus_12115#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1351
fasta sequence
                              [TGAGGCAGCAGCAAGCAAAGCCTATCTCCTTCTCGCGGCTACNACNGCCACACGCCGGCGCCATCGCCTTCCTCCTCCTCCGACTCCGACGAGCTCCGGCGACTCCGATGGACTTGGTGCGCGCGCTCGCCGCCATCCCGGCTCGTCACCCTCTCCCTCCCTCCTCGCTGACAAAGGCTCGCCGCCATGGGCCTCAACCATCGACGACCGTTCTGGCGCCGGTGCCAGGTGGAATGTTGGATAGAAGAAGAC-TGCTGTTGATTCCTGCAATCAGCATCAGCATTGGCTCCTTCGACAAGGGGGCAGCAAAAGCTGAGTTTGCTGATATGCCTGCGCTTCGT-GGGAAGGATTATGGAAAGACGAAGATG-AAGTACCCAGATTACACTGAAACAGAATCAGGTCTTCAGTACAAGGACTTGAGAGTTGGTGATGGGCCTTCTCCAAAGAAAGGGGAAACAGTAGTGGTTGATTGGGATGGCTACACAATTGGATACTATGGTCGCATTTTTGAAGCTCGAAACAAGACCAAAGGTGGTTCCTTTGAGGGTGGTGATAAAGACTTCTTTAAATTTAAGATTGGATCAGGACAGGTCATACCAGCTTTTGAGGAGGCTATATCAGACATGGCTCCAGGTGGAGTTAGGAGGATAATAGTACCACCAGATCTTGGATACCCAGACAATGACTACAACAAGTTGGGTCCAAAACCAACGACATTCTCGGGACAAAGGGCTCTGGATTTTGTTCTGAGGAATCAAGGGTTGATAGATAAAACTCTCCTGTTTGACATTGAGCTTTTGAAGATTATACCAAGTCAATAGTACATGTATATGATGTTCATTTGTTCCTTTGAAAGGCAATGTTGCTGACCACTTGGAGAAAAAACACACAAGTTTTTGGCGTCGTACCAGTACCAGTCGACATGTAAATATGGGCCTGTTTAGTTTTCAAACAAAA-TTTTTCACGCTGTCACATCGAAT-GTTTGGACACATGCATAGTGTTAAATGTAG-AAAAAAAAA-CCAATTACATAGTTCGACAGGAAATTGCGAGATGAATC-TTTTAAGCTTAATTGCGCCAGGATTTGATAATGTGGTGCTACAATAAACA-TTTGTTGATGACGGATTAATTAGGCTTGATAAATTCGTCTCGAAGTTTTCTGGCAGAATCGTGTAATTTATTGGGTTATTAGACTACGTTTAATACTTTAAATGTGTGTCCGTATATCCGATGTGACATGTAGGGGCAAATTTTTTTGCCAACTAAACAGGCCCTATATATGCCATCAATTTGAATATGAACAGAAAATTTTCTAAGCATATATACATAAATATTGTATGCCAAAAAAAAAAAA]

[+] EMBL AU055733             [TGAGGCAGCAGCAAGCAAAGCCTATCTCCTTCTCGCGGCTACNACNGCCACACGCCGGCGCCATCGCCTTCCTCCTCCTCCGACTCCGACGAGCTCCGGCGACTCCGATGGACTTGGTGCGCGCGCTCGCCGCCATCCCGGCTCGTCACCCTCTCCCTCCCTCCTCGCTGACAAAGGCTCGCCGCCATGGGCCTCAACCATCGACGACCGTTCTGGCGCCGGTGCCAGGTGGAATGTTGGATAGAAGAAGACTTGCTGTTGATTCCTGCAATCAGCATCAGCATTGGCTCCTTCGACAAGGGGGCAGCAAAAGCTGAGTTTGCTGATATGCCTGCGCTTCGTGGGGAAGGATTATGGAAAGACGAAGATGAAAGTACCCAGATTACACTGAAACAGAATCAGGTCTTCAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB661047             [                                                                    TTCCTCCTCCTCCGACTCCGACGAGCTCCGGCGACTCCGATGGACTTGGTGCGCGCGCTCGCCGCCATCCCGGCTCGTCACCCTCTCCCTCCCTCCTCGCTGACAAAGGCTCGCCGCCATGGGCCTCAACCATCGACGACCGTTCTGGCGCCGGTGCCAGGTGGAATGTTGGATAGAAGAAGAC TGCTGTTGATTCCTGCAATCAGCATCAGCATTGGCTCCTTCGACAAGGGGGCAGCAAAAGCTGAGTTTGCTGATATGCCTGCGCTTCGT GGGAAGGATTATGGAAAGACGAAGATG AAGTACCCAGATTACACTGAAACAGAATCAGGTCTTCAGTACAAGGACTTGAGAGTTGGTGATGGGCCTTCTCCAAAGAAAGGGGAAACAGTAGTGGTTGATTGGGATGGCTACACAATTGGATACTATGGTCGCATTTTTGAAGCTCGAAACAAGACCAAAGGTGGTTCCTTTGAGGGTGGTGATAAAGACTTCTTTAAATTTAAGATTGGATCAGGACAGGTCATACCAGCTTTTGAGGAGGCTATATCAGACATGGCTCCAGGTGGAGTTAGGAGGATAATAGTACCACCAGATCTTGGATACCCAGACAATGACTACAACAAGTTGGGTCCAAAACCAACGACATTCTCGGGACAAAGGGCTCTGGATTTTGTTCTGAGGAATCAAGGGTTGATAGATAAAACTCTCCTGTTTGACATTGAGCTTTTGAAGATTATACCAAGTCAATAGTACATGTATATGATGTTCATTTGTTCCTTTGAAAGGCAATGTTGCTGACCACTTGGAGAAAAAACACACAAGTTTTTGGCGTCGTACCAGTACCAGTCGACATGTAAATATGGGCCTGTTTAGTTTTCAAACAAAA                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB661051             [                                                                    TTCCTCCTCCTCCGACTCCGACGAGCTCCGGCGACTCCGATGGACTTGGTGCGCGCGCTCGCCGGCATCCCGGATCGTCACCCTCTCCCTCCCTCCTCGCTGACAAAGGCTCGCCGCCATGGGCCTCAACCATCGACGACCGTTCTGGCGCCGGTGCCAGGTGGAATGTTGGATAGAAGAAGAC TGCTGTTGATTCCTGCAATCAGCATCAACATTGGCTCCTTCGACAAGGGGGCAGCAAAAGCTGAGTTTGCTGATATGCCTGCGCTTCGT GGGAAGGATTATGGAAAGACGAAGATG AAGTACCCAGATTACACTGAAACAGAATCAGGTCTTCAGTACAAGGACTTGAGAGTTGGTGATGGGCCTTCTCCAAAGAAAGGGGAAACAGTAGTGGTTGATTGGGATGGCTACACAATTGGATACTATGGTCGCATTTTTGAAGCTCGAAACAAGACCAAAGGTGGTTCCTTTGAGGGTGGTGATAAAGACTTCTTTAAATTTAAGATTGGATCAGGACAGGTCATACCAGCTTTTGAGGAGGCTATATCAGACATGGCTCCAGGTGGAGTTAGGAGGATAATAGTACCACCAGATCTTGGATACCCAGACAATGACTACAACAAGTTGGGTCCAAAACCAACGACATTCTCGGGACAAAGGGCTCTGGATTTTGTTCTGAGGAATCAAGGGTTGATAGATAAAACTCTCCTGTGTGACATTGAGCTTTTGAAGATTATACCAAGTCAATAGTACATGTATATGATGATCATTTGTTCCTGTGAAAGGCAATGTTGCTGACCACTTGGAGAAAAAACACACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CF305391             [                                                                                                             GGACTTGGTGCGCGCGCTCGCCGCCATCCCGGCTCGTCACCCTCTCCCTCCCTCCTCGCTGACAAAAGCTCGCCGCCATGGGCCTCAACCATCGACGACCGTTCTGGCGCCGGTGCCAGGTGGAATGTTGGATAGAAGAAGAC TGCTGTTGATTCCTGCAATCAGCATCAGCATTGGCTCCTTCGACAAGGGGGCAGCAAAAGCTGAGTTTGCTGATATGCCTGCGCTTCGT GGGAAGGATTATGGAAAGACGAAGATG AAGTACCCAGATTACACTGAAACAGAATCAGGTCTTCAGTACAAGGACTTGAGAGTTGGTGATGGGCCTTCTCCAAAGAAAGGGGAAACAGTAGTGGTTGATTGGGATGGCTACACAATTGGATACTATGGTCGCATTTTTGAAGCTCGAAACAAGACCAAAGGTGGTTCCTTTGAGGGTGGTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA767155             [                                                                                                                                                                                                                                                                                                                                                                                                                   TCTTCAGTACAAGGACTTGAGAGTTGGTGATGGGCCTTCTCCAAAGAAAGGGGAAACAGTAGTGGTTGATTGGGATGGCTACACAATTGGATACTATGGTCGCATTTTTGAAGCTCGAAACAAGACCAAAGGTGGTTCCTTTGAGGGTGGTGATAAAGACTTCTTTAAATTTAAGATTGGATCAGGACAGGTCATACCAGCTTTTGAGGAGGCTATATCAGACATGGCTCCAGGTGGAGTTAGGAGGATAATAGTACCACCAGATCTTGGATACCCAGACAATGACTACAACAAGTTGGGTCCAAAACCAACGACATTCTCGGGACAAAGGGCTCTGGATTTTGTTCTGAGGAATCAAGGGTTGATAGATAAAACTCTCCTGTTTGACATTGAGCTTTTGAAGATTATACCAAGTCAATAGTACATGTATATGATGTTCATTTGTTCCTTTGAAAGGCAATGTTGCTGACCACTTGGAGAAAAAACACACAAGTTTTTGGCGTCGTACCAGTACCAGTCGACATGTAAATATGGGCCTGNTTAGTTTTCAAACAAAATTTTTTCACGCTGTCACATCGAATGGTTTGGACACATGCATAGTGGTAAATGTAGNAAAAAAAAACCCAATTACATAGTTCGACAGGAAATTGCGAGATGAATCTTTTTAAGCTTAANTGCGCCAGGATTTGATAATGNGGNGCTACAATAAACATTTTGNTGATGACGGGNTAATTAGGCTTGATn                                                                                                                                                                                                                     ]
[-] EMBL CB661052             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGGAAACAGTAGTGGTTGATTGGGATGGCTACACAATTGGATACTATGGTCGCATTTTTGAAGCTCGAAACAAGACCAAAGGTGGTTCCTTTGAGGGTGGTGATAAAGACTTCTTTAAATTTAAGATTGGATCAGGACAGGTCATACCAGCTTTTGAGGAGGCTATATCAGACATGGCTCCAGGTGGAGTTAGGAGGATAATAGTACCACCAGATCTTGGATACCCAGACAATGACTACAACAAGTTGGGTCCAAAACCAACGACATTTTCGGGACAAAGGGCTTTGGATTTTGTTTTGAGGAATCAAGGGTTGATAGATAAAACTCTCCTGTTTGACATTGAGCTTTTGAAGATTATACCAAGTCAATAGTACATGTATATGATGTTCATTTGTTCCTTTGAAAGGCAATGTTGCTGACCCCTTGGAGAAAAAACACACAAGTTTTTGGCGTCGTACCAGTACCAGTCGACATGTAAATATGGGCCTGTTTAGTTTTCAAACAAAA TTTTTCACGCTGTCACATCGAAT GTTTGGACCCATGCATAGTGTTAAATGTAG AAAAAAAAA CCAATTACATAGTTCGACAGGAAATTGCGAGATGAATC TTTTAAGCTTAATTGCGCCAGGATTTGATAATGTGGTGCTACAATAAACA TTTGTTGATGACGGATTAATTAGGCTTGATAAATTCGTCTCGAAGTTTTCTGGCAGAATCGTGTAATTTATTGGGTTATTAGACTA                                                                                                                                                              ]
[-] EMBL CB661048             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GAAACAGTAGTGGTTGATTGGGATGGCTACACAATTGGATACTATGGTCGCATTTTTGAAGCTCGAAACAAGACCAAAGGTGGTTCCTTTGAGGGTGGTGATAAAGACTTCTTTAAATTTAAGATTGGATCAGGACAGGTCATACCAGCTTTTGAGGAGGCTATATCAGACATGGCTCCAGGTGGAGTTAGGAGGATAATAGTTCCCCCAGATCTTGGATACCCAGACAATGACTACAACAAGTTGGGTCCAAAACCAACGACATTCTCGGGACAAAGGGCTCTGGATTTTGTTTTGAGGAATCAAGGGTTGATAGATAAAACTCTCCTGTTTGACATTGAGCTTTTGAAGATTATACCAAGTCAATAGTACATGTATATGATGTTCATTTGTTCCTTTGAAAGGCAATGTTGCTGACCCCTTGGAGAAAAAACACACAAGTTTTTGGCGTCGTACCAGTACCAGTCGACATGTAAATATGGGCCTGTTTAGTTTTCAAACAAAA TTTTTCACGCTGTCACATCGAAT GTTTGGACCCATGCATAGTGTTAAATGTAG AAAAAAAAA CCAATTACATAGTTCGACAGGAAATTGCGAGATGAATC TTTTAAGCTTAATTGCGCCAGGATTTGATAATGTGGTGCTACAATAAACA TTTGTTGATGACGGATTAATTAGGCTTGATAAATTCGTCTCGAAGTTTTCTGGCAGAATCGTGTAATTTAATGGGTTATTAGACTA                                                                                                                                                              ]
[+] EMBL AU055734             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATGGGCCTGTTTAGTTTTCAAACAAAA TTTTTCACGCTGTCACATCGAAT GTTTGGACACATGCATAGTGTTAAATGTAG AAAAAAAAA CCAATTACATAGTTCGACAGGAAATTGCGAGATGAATC TTTTAAGCTTAATTGCGCCAGGATTTGATAATGTGGTGCTACAATAAACA TTTGTTGATGACGGATTAATTAGGCTTGATAAATTCGTCTCGAAGTTTTCTGGCAGAATC TGTAATTTGTTTTGTTATTAGACTACGTTTAATACTTTAAATGTGTGTCCGTATATCCGATGTGACATGTAGGGGCAAATTTTTTTGCCAACTAAACAGGCCCTATATATGCCATCAATTTGAATATGAACAGAAAATTTTCTAAGCATATATACATAAATATTGTATGCCAAAAAAAAAAAA]
[+] EMBL BI806083             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CACATCGAAT GTTTGGACACATGCATAGTGTTAAATGTAG AAAAAAAAA CCAATTACATAGTTCGACAGGAAATTGCGAGATGAATC TTTTAAGCTTAATTGCGCCAGGATTTGATAATGTGGTGCTACAATAAACA TTTGTTGATGACGGATTAATTAGGCTTGATAAATTCGTCTCGAAGTTTTCTGGCAGAATC TGTAATTTGTTTTGTTATTAGACTACGTTTAATACTTTAAATGTGTGTCCGTATATCCGATGTGACATGTA GGGCCAATTTTTTTGCCAACTAAACAGGCCCTATATATGCCATCAATTTGAATATGAACAGAAAATTTTCTAAGCATATATACATAAATATTGTAT CCAAAAAAAAAA  ]


>consensus_12115#0 TGAGGCAGCAGCAAGCAAAGCCTATCTCCTTCTCGCGGCTACNACNGCCACACGCCGGCG CCATCGCCTTCCTCCTCCTCCGACTCCGACGAGCTCCGGCGACTCCGATGGACTTGGTGC GCGCGCTCGCCGCCATCCCGGCTCGTCACCCTCTCCCTCCCTCCTCGCTGACAAAGGCTC GCCGCCATGGGCCTCAACCATCGACGACCGTTCTGGCGCCGGTGCCAGGTGGAATGTTGG ATAGAAGAAGACTGCTGTTGATTCCTGCAATCAGCATCAGCATTGGCTCCTTCGACAAGG GGGCAGCAAAAGCTGAGTTTGCTGATATGCCTGCGCTTCGTGGGAAGGATTATGGAAAGA CGAAGATGAAGTACCCAGATTACACTGAAACAGAATCAGGTCTTCAGTACAAGGACTTGA GAGTTGGTGATGGGCCTTCTCCAAAGAAAGGGGAAACAGTAGTGGTTGATTGGGATGGCT ACACAATTGGATACTATGGTCGCATTTTTGAAGCTCGAAACAAGACCAAAGGTGGTTCCT TTGAGGGTGGTGATAAAGACTTCTTTAAATTTAAGATTGGATCAGGACAGGTCATACCAG CTTTTGAGGAGGCTATATCAGACATGGCTCCAGGTGGAGTTAGGAGGATAATAGTACCAC CAGATCTTGGATACCCAGACAATGACTACAACAAGTTGGGTCCAAAACCAACGACATTCT CGGGACAAAGGGCTCTGGATTTTGTTCTGAGGAATCAAGGGTTGATAGATAAAACTCTCC TGTTTGACATTGAGCTTTTGAAGATTATACCAAGTCAATAGTACATGTATATGATGTTCA TTTGTTCCTTTGAAAGGCAATGTTGCTGACCACTTGGAGAAAAAACACACAAGTTTTTGG CGTCGTACCAGTACCAGTCGACATGTAAATATGGGCCTGTTTAGTTTTCAAACAAAATTT TTCACGCTGTCACATCGAATGTTTGGACACATGCATAGTGTTAAATGTAGAAAAAAAAAC CAATTACATAGTTCGACAGGAAATTGCGAGATGAATCTTTTAAGCTTAATTGCGCCAGGA TTTGATAATGTGGTGCTACAATAAACATTTGTTGATGACGGATTAATTAGGCTTGATAAA TTCGTCTCGAAGTTTTCTGGCAGAATCGTGTAATTTATTGGGTTATTAGACTACGTTTAA TACTTTAAATGTGTGTCCGTATATCCGATGTGACATGTAGGGGCAAATTTTTTTGCCAAC TAAACAGGCCCTATATATGCCATCAATTTGAATATGAACAGAAAATTTTCTAAGCATATA TACATAAATATTGTATGCCAAAAAAAAAAAA



consensusID : consensus_12115#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 694
fasta sequence
                              [GGGGCTCTGGATTTTGTTCTGAGGAATCAAGGGTTGATAGATAAAACTCTCCNTGTTTGACATTGAGCTTTTGAAGATTATACCAAGTCAATAGTACATGGCAATGTTGCTGACCACTTGGAGAAAAAACACACAAGTTTTNGGCGTCGTACCAGTACCAGTCGACATGTAAATATGGGCCTGTTTAGTTTTCAAACAAAATTTTTCACGCTGTCACATCGAATGTTTGGACACATGCATAGTGTTAAATGTAGAAAAAAAANCCAATTACATAGTTCGACAGGAAATTGCGAGATGAATCTTTTAAGCTTAATTGCGCCAGGATTTGATAATGTGGTGCTACAATAAACATTTGTTGATGACGGATTAATTAGGCTTGATAAATTCGTCTCGAAGTTTTCTGGCAGAATCTGTAATTTGTTTTGCTATTAGACTACGTTTAATACTTTAAATGTGTGTCCGTATATCCGATGTGACATGTAGGGGCAAATTTTTTTGCCAACTAAACAGGCCCTATATATGCCATCAATTTGAATATGAACAGAAAATTTTCTAAGCATATATACATAAATATTGTATGCCAAATGCTTGTTGTACAGAACTGACACCACGGACGAATTCATTACGACAGTAATTATTATTCAAACCATCTTGATATGAGATGAACCACTTATACATCAAAAAAAAAAAAAAA]

[-] EMBL CA760133             [GGGGCTCTGGATTTTGTTCTGAGGAATCAAGGGTTGATAGATAAAACTCTCCNTGTTTGACATTGAGCTTTTGAAGATTATACCAAGTCAATAGTACATGGCAATGTTGCTGACCACTTGGAGAAAAAACACACAAGTTTTNGGCGTCGTACCAGTACCAGTCGACATGTAAATATGGGCCTGTTTAGTTTTCAAACAAAATTTTTCACGCTGTCACATCGAATGTTTGGACACATGCATAGTGTTAAATGTAGAAAAAAAANCCAATTACATAGTTCGACAGGAAATTGCGAGATGAATCTTTTAAGCTTAATTGCGCCAGGATTTGATAATGTGGTGCTACAATAAACATTTGTTGATGACGGATTAATTAGGCTTGATAAATTCGTCTCGAAGTTTTCTGGCAGAATCTGTAATTTGTTTTGCTATTAGACTACGTTTAATACTTTAAATGTGTGTCCGTATATCCGATGTGACATGTAGGGGCAAATTTTTTTGCCAACTAAACAGGCCCTATATATGCCATCAATTTGAATATGAACAGAAAATTTTCTAAGCATATATACATAAATATTGTATGCCAAATGCTTGTTGTACAGAACTGACACCACGGACGAATTCATTACGACAGTAATTATTATTCAAACCATCTTGATATGAGATGAACCACTTATACATCAAAAAAAAAAAAAAA]


>consensus_12115#1 GGGGCTCTGGATTTTGTTCTGAGGAATCAAGGGTTGATAGATAAAACTCTCCNTGTTTGA CATTGAGCTTTTGAAGATTATACCAAGTCAATAGTACATGGCAATGTTGCTGACCACTTG GAGAAAAAACACACAAGTTTTNGGCGTCGTACCAGTACCAGTCGACATGTAAATATGGGC CTGTTTAGTTTTCAAACAAAATTTTTCACGCTGTCACATCGAATGTTTGGACACATGCAT AGTGTTAAATGTAGAAAAAAAANCCAATTACATAGTTCGACAGGAAATTGCGAGATGAAT CTTTTAAGCTTAATTGCGCCAGGATTTGATAATGTGGTGCTACAATAAACATTTGTTGAT GACGGATTAATTAGGCTTGATAAATTCGTCTCGAAGTTTTCTGGCAGAATCTGTAATTTG TTTTGCTATTAGACTACGTTTAATACTTTAAATGTGTGTCCGTATATCCGATGTGACATG TAGGGGCAAATTTTTTTGCCAACTAAACAGGCCCTATATATGCCATCAATTTGAATATGA ACAGAAAATTTTCTAAGCATATATACATAAATATTGTATGCCAAATGCTTGTTGTACAGA ACTGACACCACGGACGAATTCATTACGACAGTAATTATTATTCAAACCATCTTGATATGA GATGAACCACTTATACATCAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12115#0      TGAGGCAGCAGCAAGCAAAGCCTATCTCCTTCTCGCGGCTACNACNGCCACACGCCGGCG 60
consensus_12115#1      ------------------------------------------------------------
                                                                                   

consensus_12115#0      CCATCGCCTTCCTCCTCCTCCGACTCCGACGAGCTCCGGCGACTCCGATGGACTTGGTGC 120
consensus_12115#1      ------------------------------------------------------------
                                                                                   

consensus_12115#0      GCGCGCTCGCCGCCATCCCGGCTCGTCACCCTCTCCCTCCCTCCTCGCTGACAAAGGCTC 180
consensus_12115#1      ------------------------------------------------------------
                                                                                   

consensus_12115#0      GCCGCCATGGGCCTCAACCATCGACGACCGTTCTGGCGCCGGTGCCAGGTGGAATGTTGG 240
consensus_12115#1      ------------------------------------------------------------
                                                                                   

consensus_12115#0      ATAGAAGAAGACTGCTGTTGATTCCTGCAATCAGCATCAGCATTGGCTCCTTCGACAAGG 300
consensus_12115#1      ------------------------------------------------------------
                                                                                   

consensus_12115#0      GGGCAGCAAAAGCTGAGTTTGCTGATATGCCTGCGCTTCGTGGGAAGGATTATGGAAAGA 360
consensus_12115#1      ------------------------------------------------------------
                                                                                   

consensus_12115#0      CGAAGATGAAGTACCCAGATTACACTGAAACAGAATCAGGTCTTCAGTACAAGGACTTGA 420
consensus_12115#1      ------------------------------------------------------------
                                                                                   

consensus_12115#0      GAGTTGGTGATGGGCCTTCTCCAAAGAAAGGGGAAACAGTAGTGGTTGATTGGGATGGCT 480
consensus_12115#1      ------------------------------------------------------------
                                                                                   

consensus_12115#0      ACACAATTGGATACTATGGTCGCATTTTTGAAGCTCGAAACAAGACCAAAGGTGGTTCCT 540
consensus_12115#1      ------------------------------------------------------------
                                                                                   

consensus_12115#0      TTGAGGGTGGTGATAAAGACTTCTTTAAATTTAAGATTGGATCAGGACAGGTCATACCAG 600
consensus_12115#1      ------------------------------------------------------------
                                                                                   

consensus_12115#0      CTTTTGAGGAGGCTATATCAGACATGGCTCCAGGTGGAGTTAGGAGGATAATAGTACCAC 660
consensus_12115#1      ------------------------------------------------------------
                                                                                   

consensus_12115#0      CAGATCTTGGATACCCAGACAATGACTACAACAAGTTGGGTCCAAAACCAACGACATTCT 720
consensus_12115#1      ------------------------------------------------------------
                                                                                   

consensus_12115#0      CGGGACAAAGGGCTCTGGATTTTGTTCTGAGGAATCAAGGGTTGATAGATAAAACTCTCC 780
consensus_12115#1      --------GGGGCTCTGGATTTTGTTCTGAGGAATCAAGGGTTGATAGATAAAACTCTCC 52
                                ***************************************************

consensus_12115#0      T-GTTTGACATTGAGCTTTTGAAGATTATACCAAGTCAATAGTACATGTATATGATGTTC 839
consensus_12115#1      NTGTTTGACATTGAGCTTTTGAAGATTATACCAAGTCAATAGTACATG------------ 100
                         **********************************************            

consensus_12115#0      ATTTGTTCCTTTGAAAGGCAATGTTGCTGACCACTTGGAGAAAAAACACACAAGTTTTTG 899
consensus_12115#1      -----------------GCAATGTTGCTGACCACTTGGAGAAAAAACACACAAGTTTTNG 143
                                        ***************************************** *

consensus_12115#0      GCGTCGTACCAGTACCAGTCGACATGTAAATATGGGCCTGTTTAGTTTTCAAACAAAATT 959
consensus_12115#1      GCGTCGTACCAGTACCAGTCGACATGTAAATATGGGCCTGTTTAGTTTTCAAACAAAATT 203
                       ************************************************************

consensus_12115#0      TTTCACGCTGTCACATCGAATGTTTGGACACATGCATAGTGTTAAATGTAGAAAAAAAAA 1019
consensus_12115#1      TTTCACGCTGTCACATCGAATGTTTGGACACATGCATAGTGTTAAATGTAGAAAAAAAAN 263
                       *********************************************************** 

consensus_12115#0      CCAATTACATAGTTCGACAGGAAATTGCGAGATGAATCTTTTAAGCTTAATTGCGCCAGG 1079
consensus_12115#1      CCAATTACATAGTTCGACAGGAAATTGCGAGATGAATCTTTTAAGCTTAATTGCGCCAGG 323
                       ************************************************************

consensus_12115#0      ATTTGATAATGTGGTGCTACAATAAACATTTGTTGATGACGGATTAATTAGGCTTGATAA 1139
consensus_12115#1      ATTTGATAATGTGGTGCTACAATAAACATTTGTTGATGACGGATTAATTAGGCTTGATAA 383
                       ************************************************************

consensus_12115#0      ATTCGTCTCGAAGTTTTCTGGCAGAATCGTGTAATTTATTGGGTTATTAGACTACGTTTA 1199
consensus_12115#1      ATTCGTCTCGAAGTTTTCTGGCAGAATC-TGTAATTTGTTTTGCTATTAGACTACGTTTA 442
                       **************************** ******** **  * ****************

consensus_12115#0      ATACTTTAAATGTGTGTCCGTATATCCGATGTGACATGTAGGGGCAAATTTTTTTGCCAA 1259
consensus_12115#1      ATACTTTAAATGTGTGTCCGTATATCCGATGTGACATGTAGGGGCAAATTTTTTTGCCAA 502
                       ************************************************************

consensus_12115#0      CTAAACAGGCCCTATATATGCCATCAATTTGAATATGAACAGAAAATTTTCTAAGCATAT 1319
consensus_12115#1      CTAAACAGGCCCTATATATGCCATCAATTTGAATATGAACAGAAAATTTTCTAAGCATAT 562
                       ************************************************************

consensus_12115#0      ATACATAAATATTGTATGCCAAAAAAAAAAAA---------------------------- 1351
consensus_12115#1      ATACATAAATATTGTATGCCAAATGCTTGTTGTACAGAACTGACACCACGGACGAATTCA 622
                       ***********************                                     

consensus_12115#0      ------------------------------------------------------------
consensus_12115#1      TTACGACAGTAATTATTATTCAAACCATCTTGATATGAGATGAACCACTTATACATCAAA 682
                                                                                   

consensus_12115#0      ------------
consensus_12115#1      AAAAAAAAAAAA 694
                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)