cluster # 12130

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Oryza sativa
cluster # 12130 cluster # 12130 Sequences # 10 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12130#0 length = 781 sequences # 10
consensusID : consensus_12130#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 781
fasta sequence
                              [CAAAATAATCTCTGTGTTTCTGGCTCATATCATGTGACATGTGTGACAGTCTGAGAGCTTTCGTCCTCCTCCATTCCACACCAAGCCGGCCATGGCTAAGGTAGCTCTCAGCT-CCCTCCTCGCCGTCGGTGGCGCCGCCGCCTTCGCCGTTCAGCCGTCGAAGAAAACCGGCTCCGGTTTGTTTCGCAATCGCGTCATCACCGTCAGGCGG-CCCAGGATTTCAGCCAATCTCGGTGGAG-ATGGGGAGGTGAAGCCTGCAGGTAACAAGAAGAAGTTCATCACCAGAGAAGAGGAGCCAGAGCAGTATTGGCAGGCGGCAGGGGAGAGGAAGGGCGAGAACCCGATGAAGACGCCGCTGCCCTACATCATCATCTTTGGCATGTCGACGCCCTTCGTCATCCTCGCCATCGCCTTCGCTAATGGCTGGATCAAGGTCCCCGT-CCGGTGAACCT--CCTCCCGTCCATGTCGCATCATCATCAGTTCATCACATCAGCAAATCTTGGAAGGTTGCTACTTGCTGCCAAGAAACTCCTCACTGCGACCACTGCACTCCTACCGGGAGCCCTGAAGAGTAAAATTTCATAGAGATCTTGAGCATACCAGTACGTAATGTATGTGATAAACAAGTACCTTTTTTCCCAGTACTGTAAATCTGTAAGTAATTACAGTTCATATTAACATCCTTCCTGCTTCTGATCCAAGGAGGTTTTGTCATGTACAAGAGGAGGTTTTTATGGCATCAGCTTTGTCAGTTGATATTCAGTTAAAAAGCAAGTTGCAG]

[+] EMBL CF279690             [CAAAATAATCTCTGTGTTTCTGGCTCATATCATGTGACATGTGTGACAGTCTGAGAGCTTTCGTCCTCCTCCATTCCACACCAAGCCGGCCATGGCTAAGGTAGCTCTCAGCT CCCTCCTCGCCGTCGGTGGCGCCGCCGCCTTCGCCGTTCAGCCGTCGAAGAAAACCGGCTCCGGTTTGTTTCGCAATCGCGTCATCACCGTCAGGCGG CCCAGGATTTCAGCCAATCTCGGTGGAG ATGGGGAGGTGAAGCCTGCAGGTAACAAGAAGAAGTTCATCACCAGAGAAGAGGAGCCAGAGCAGTATTGGCAGGCGGCAGGGGAGAGGAAGGGCGAGAACCCGATGAAGACGCCGCTGCCCTACATCATCATCTTTGGCATGTCGACGCCCTTCGTCATCCTCGCCATCGCCTTCGCTAATGGCTGGATCAAGGTCCCCGT CCGGTGAACCT  CCCCCCGTCCATGTCGCATCATCATCAGTTCA                                                                                                                                                                                                                                                                                                         ]
[+] EMBL C73942               [                        TCATATCATGTGACATGTGTGACAGTCTGAGAGCTTTCGTCCTCCTCCATTCCACACCAAGCCGGCCATGGCTAAGGTAGCTCTCAGCT CCCTCCTCGCCGTCGGTGGCGCCGCCGNCTTCGCCGTTCAGCCGTCGAAGAAAACCGGCTCCGGTTTGTTTCGCAATCGCGTCATCACCGTCA GCGG CCCAGGATTTCAGCCAATCTCGGTGGAG ATGGGGAGGTGAAGCCTGCAGGTAACAAGAAGAAGTTCATCACCAGAGAAGAGGAGCCAGAGCAGTATTGGCAGGCGGCAGGGGAGAGGAAGGGCGAGAACCCGATGAAGACGNCGNTG CCTACATCATCATCTTTGGCATGTCGACGGCCTTCGTCATCCTGGC                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL C99719               [                         CATATCATGTGACATGTGTGACAGTCTGAGAGCTTTCGTCCTCCTCCATTCCACACCAAGCCGGCCATGGCTAAGGTAGCTCTCAGCTCCCCTCNTCGCCNTCGTTGGCGCCGCCGCTTTCGCCGTTCACCCGTCGAAGAAAACCGGCTCCGGTTTGTTTCGC ATCGCGTCATCACCGTCAGGCGGCCCCAGGATTTCAGCCAATCTCGGTGGAG ATGGGGAGGTGAAGCCTGCAGGTAACAAGAAGAAGTTCATCACCAGAGAAGAGGAGCCAGAGCAGTATTGGCAGGCGGCAGGGGAGAGGAAGGGCGAGAACCCGATGAAGACGCCGCTGCCCTACATCATCATCTTTGGCATGTCGACG CCTTCGTCATCCTCGCCATCGCCTTCGCTAATGGCTGGATCAAGGTCCCCGTNCCGGTGAACCT  CCTCCCGTCCATGTCGCATCATCATCAGTTCATCACATCAGCAAATCTTGGAAGGTTGCTACTTGCTGCCAAGAAACTCCTCACTGCGACCACTGCACTCCTACCGGGAGCCCTGAAGAGTAAAATTTCATAGAGATCTTGAGCATACCAGTACGTAATGTATGTGATAAACAAGTACCTTTTTTCCCAGTACTGTAAATCTGTAAGTAATTACAGTTCATATTAACATCCTTCCTGCTTCTGATCCAAGGAGGTTTTGTCATGTACAAGAGGAGGTTTTTATGGCATCAGCTTTGTCAaaaaaa                        ]
[+] EMBL AK065923             [                                 GTGACATGTGTGACAGTCTGAGAGCTTTCGTCCTCCTCCATTCCACACCAAGCCGGCCATGGCTAAGGTAGCTCTCAGCT CCCTCCTCGCCGTCGGTGGCGCCGCCGCCTTCGCCGTTCAGCCGTCGAAGAAAACCGGCTCCGGTTTGTTTCGCAATCGCGTCATCACCGTCAGGCGG CCCAGGATTTCAGCCAATCTCGGTGGAG ATGGGGAGGTGAAGCCTGCAGGTAACAAGAAGAAGTTCATCACCAGAGAAGAGGAGCCAGAGCAGTATTGGCAGGCGGCAGGGGAGAGGAAGGGCGAGAACCCGATGAAGACGCCGCTGCCCTACATCATCATCTTTGGCATGTCGACGCCCTTCGTCATCCTCGCCATCGCCTTCGCTAATGGCTGGATCAAGGTCCCCGT CCGGTGAACCT  CCTCCCGTCCATGTCGCATCATCATCAGTTCATCACATCAGCAAATCTTGGAAGGTTGCTACTTGCTGCCAAGAAACTCCTCACTGCGACCACTGCACTCCTACCGGGAGCCCTGAAGAGTAAAATTTCATAGAGATCTTGAGCATACCAGTACGTAATGTATGTGATAAACAAGTACCTTTTTTCCCAGTACTGTAAATCTGTAAGTAATTACAGTTCATATTAACATCCTTCCTGCTTCTGATCCAAGGAGGTTTTGTCATGTACAAGAGGAGGTTTTTATGGCAT                                         ]
[+] EMBL CF292312             [                                       TGTGTGACAGTCTGAGAGCTTTCGTCCTCCTCCATTCCACACCAAGCCGGCCATGGCTAAGGTAGCTCTCAGCT CCCTCCTCGCCGTCGGTGGCGCCGCCGCCTTCGCCGTTCAGCCGTCGAAGAAAACCGGCTCCGGTTTGTTTCGCAATCGCGTCATCACCGTCAGGCGG CCCAGGATTTCAGCCAATCTCGGTGGAGAATGGGGAGGTGAAGCCTGCAGGTAACAAGAAGAAGTTCATCACCAGAGAAGAGGAGCCAGAGCAGTATTGGCAGGCGGCAGGGGAGAGGAAGGGCGAGAACCCGATGAAGACGCCGCTGCCCTACATCATCATCTTTGGCATGTCGACGCCCTTCGTCATCCTCGCCATCGCCTTCGCTAATGGCTGGATCAAGGTCCCCGT CCGGTGAACCT  CCTCCCGTCCATGTCGCATCATCATCAGTTCATCACA                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CA752968             [                                                                                        GCCATGGCTAAGGTAGCTCTCAGCT CCCTCCTCGCCGTCGGTGGCGCCGCCGCCTTCGCCGTTCAGCCGTCGAAGAAAACCGGCTCCGGTTTGTTTCGCAATCGCGTCATCACCGTCAGGCGG CCCAGGATTTCAGCCAATCTCGGTGGAG ATGGGGAGGTGAAGCCTGCAGGTAACAAGAAGAAGTTCATCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CF279689             [                                                                                                                                                                                                                                  CCAATCTCGGTGGAG ATGGGGAGGTGAAGCCTGCAGGTAACAAGAAGAAGTTCATCACCAGAGAAGAGGAGCCAGAGCAGTATTGGCAGGCGGCAGGGGAGAGGAAGGGCGAGAACCCGAAGAAGACGCCGCTGCCCTACATCATCATCTTTGGCATGTCGACGCCCTTCGTCATCCTCGCCATCGCCTTCGNTAATGGCTGGATCAAGGTCCCCGT CCGGTGAACCTCCCCCCCCGTCCATGTCGCATCATCATCAGTTCATCACATCAGCAAATCTTGGAAGGTTGCTACTTGCTGCCAAGAAACTCCTCACTGCGACCACTGCACTCCTACCGGGAGCCCTGAAGAGTAAAATTTCATAGAGATCTTGAGCATACCAGTACGTAATGTATGTGATAAACAAGTACCTTTTTTCCCAGTACTGTAAATCTGTAAGTAATTACAGTTCATATTAACATCCTTCCTGCTTCTGATCCAAGGAGGTTTTGTCATGTACAAGAGGAGGTTTTTATGGCATCAGCTTTGTCAGTTGATATTCAGTTAAAAA           ]
[-] EMBL CF292313             [                                                                                                                                                                                                                                                                                              AGAGAAGAGGAGCCAGAGCAGTATTGGCAGGCGGCAGGGGAGAGGAAGGGCGAGAACCCGATGAAGACGCCGCTGCCCTACATCATCATCTTTGGCATGTCGACGCCCTTCGTCATCCTCGCCATCGCCTTCGCTAATGGCTGGATCAAGGTCCCCGT CCGGTGAACCT  CCTCCCGTCCATGTCGCATCATCATCAGTTCATCACATCAGCAAATCTTGGAAGGTTGCTACTTGCTGCCAAGAAACTCCTCACTGCGACCACTGCACTCCTACCGGGAGCCCTGAAGAGTAAAATTTCATAGAGATCTTGAGCATACCAGTACGTAATGTATGTGATAAACAAGTACCTTTTTTCCCAGTACTGTAAATCTGTAAGTAATTACAGTTC  ATTAACATCCTTCCTGCTTCTGATCCAAaaaaa                                                                           ]
[+] EMBL CA764705             [                                                                                                                                                                                                                                                                                                                                              GGCGAGAACCCGATGAAGACGCCGCTGCCCTACATCATCATCTTTGGCATGTCGACGCCCTTCGTCATCCTCGCCATCGCCTTCGCTAATGGCTGGATCAAGGTCCCCGT CCGGTGAACCT  CCTCCCGTCCATGTCGCATCATCATCAGTTCATCACATCAGCAAATCTTGGAAGGTTGCTACTTGCTGCCAAGAAACTCCTCACTGCGACCACTGCACTCCTACCGGGAGCCCTGAAGAGTAAAATTTCATAGAGATCTTGAGCATACCAGTACGTAATGTATGTGATAAGCAAGTACCTTTTTTCCCAGTACTGTAAATCTGTGAGTAATTACAGTTCATATTAACATCCTTCCTGCTTCTGATCCAAGGAGGTTTTGTCATGTACAAGAGGAGGTTTTTATGGCATCAGCTTTGTCAGTTGATATTCAGTTAACGTGCAAGTTGCAG]
[-] EMBL CF589245             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                             agCGTCCATGTCGCATCATCATCAGTTCATCACATCAGCAAATCTTGGAAGGTTGCTACTTGCTGCCAAGAAACTCCTCACTGCGACCACTGCACTCCTACCGGGAGCCCTGAAGAGTAAAATTTCATAGAGATCTTGAGCATACCAGTACGTAATGTATGTGATAAACAAGTACCTTTTTTCCCAGTACTGTAAATCTGTAAGTAATTACAGTTCATATTAACATCCTTCCTGCTTCTGATCCAAGGAGGTTTTGTCATGTACAAGAGGAGGTTT                                                  ]




>consensus_12130#0
CAAAATAATCTCTGTGTTTCTGGCTCATATCATGTGACATGTGTGACAGTCTGAGAGCTT
TCGTCCTCCTCCATTCCACACCAAGCCGGCCATGGCTAAGGTAGCTCTCAGCTCCCTCCT
CGCCGTCGGTGGCGCCGCCGCCTTCGCCGTTCAGCCGTCGAAGAAAACCGGCTCCGGTTT
GTTTCGCAATCGCGTCATCACCGTCAGGCGGCCCAGGATTTCAGCCAATCTCGGTGGAGA
TGGGGAGGTGAAGCCTGCAGGTAACAAGAAGAAGTTCATCACCAGAGAAGAGGAGCCAGA
GCAGTATTGGCAGGCGGCAGGGGAGAGGAAGGGCGAGAACCCGATGAAGACGCCGCTGCC
CTACATCATCATCTTTGGCATGTCGACGCCCTTCGTCATCCTCGCCATCGCCTTCGCTAA
TGGCTGGATCAAGGTCCCCGTCCGGTGAACCTCCTCCCGTCCATGTCGCATCATCATCAG
TTCATCACATCAGCAAATCTTGGAAGGTTGCTACTTGCTGCCAAGAAACTCCTCACTGCG
ACCACTGCACTCCTACCGGGAGCCCTGAAGAGTAAAATTTCATAGAGATCTTGAGCATAC
CAGTACGTAATGTATGTGATAAACAAGTACCTTTTTTCCCAGTACTGTAAATCTGTAAGT
AATTACAGTTCATATTAACATCCTTCCTGCTTCTGATCCAAGGAGGTTTTGTCATGTACA
AGAGGAGGTTTTTATGGCATCAGCTTTGTCAGTTGATATTCAGTTAAAAAGCAAGTTGCA
G
clustalw multiple alignements is not computed in this case