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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12134#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 893 fasta sequence
[CTCTTTTTTTCTTTTTTCCTTTTTAGTTTTTTTTTGCTCATTTTTTTTTCTTTTATTCTCTAAATCTATTCTTTCATTTGTTAATTTTCTCTTCACTTTTTTTCCGCTCTATTCTTCTTTTTCTCTTTCTTTTTCTATTCTTCTACTCAGTAATCTACTGATCATTTAATAAATTTTCTAAAGAAATAATGATTGCTGCTTCTTTCTTATCTTTTTGTTTTTCTTTTTCTTAATCTTCTTCTCTTTTCGTTTTTCTTCTTTCTCTTCTCTAATTCTTCTAATTCTCTAAATTCTAAATTTTAAATTCTCATCTCGCTATTGTCTTCTTCTAAGCTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCGGCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCTCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGAC-GCCGCTCCGCCCGGGCTCGCGCCCC-GGTTTTGC-GC-G-CCGC-AGCTATTCCC-TTAGTGAGGTAATTTAGGTGCCTGCG]
[+] EMBL CB677973 [CTCTTTTTTTCTTTTTTCCTTTTTAGTTTTTTTTTGCTCATTTTTTTTTCTTTTATTCTCTAAATCTATTCTTTCATTTGTTAATTTTCTCTTCACTTTTTTTCCGCTCTATTCTTCTTTTTCTCTTTCTTTTTCTATTCTTCTACTCAGTAATCTACTGATCATTTAATAAATTTTCTAAAGAAATAATGATTGCTGCTTCTTTCTTATCTTTTTGTTTTTCTTTTTCTTAATCTTCTTCTCTTTTCGTTTTTCTTCTTTCTCTTCTCTAATTCTTCTAATTCTCTAAATTCTAAATTTTAAATTCTCATCTCGCTATTGTCTTCTTCTAAGCTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCGGCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCTCCTCTTCGGCCTTCAAA TTCTCATTTGAATATTTG ]
[+] EMBL CB678007 [ CTTTTTTTCTTTATTCCATTTAAGTTTTTTTTTGCTCATTTTTTTTTCTTTTATTCTCCAAATCTATTCTTTCATTTGTTAATTTTCTCATCACTTTTTTTCCGCTCTATTCTTCTTTTTCTCTTTCTTTTTCTATTCTTCTACTCAAAAATCTACTGATCATTTAATAAATTTTCTAAAGAAATAATGATTGCTGCTTCTTTCTTATCTTTTTGTTTTTCTTTTTCTTAATCTTCTTCTCTTTTCGTTTTTCTTCATTCTCTTCTCTAATTCTTCTAATTCTCTAAATTCTAAATTTTAAATTCTCATCTCGCTATTGTCTTCTTCTAAGATGGGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGATGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGCCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCGCGCAACGTGCGGTGCTCTTCCGGCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCTAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTAAACCGCCACTTCCCGGATCGGGAAATCTTAACCCGATTCCATTTCGGGGCACGCGCGAGGTCGC ]
[+] EMBL CB677940 [ TTCCTTTTTAGTTTTTTTTCCCTCATTTTTTTTTCTTTTATTCTCTAAATCTATTCTTTCATTTGTTAATTTTCTCTTCACTTTTTTTCCGCTCTATTCTTCTTTTTCTCTTTCTTTTTCTATTCTTCTACTCAGTAATCTACTGATCATTTAATAAATTTTCTAAAGAAATAATGATTGCTGCTTCTTTCTTATCTTTTTGTTTTTCTTTTTCTTAATCTTCTTCTCTTTTCGTTTTTCTTCTTTCTCTTCTCTAATTCTTCTAATTCTCTAAATTCTAAATTTTAAATTCTCATCTCGCTATTGTCTTCTTCTAAGCTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGCTGTTCACCTTGGAGACCTGTTGCGGTTATGAATACGACCGGGCGTGGACGGTACTCGGCCCTCCGGATTTTCAAGGGCCGCCGGGGGCACACCGGACACCGCACGACGCGCGGTGCTCTTCCGGCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTCGGGGGGCCct ]
[-] EMBL BU673695 [ gaggCATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCGGCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGC AGTGCCGTTCACATGGAACCTTTCTCCTCTTCGGCCTTC AAGTTCTCATTTGAATATTTGCTACTACCACC AGATCTGCACCGACGGCCGCTCCGCCCGGGCTCGCGCCCC GGTTTTGCGGCGG CCGC GCTATTCC TAGTGAGGTAATTTAGG ]
[-] EMBL BU673522 [ CCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCGGCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCTCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGAC GCCGCTCCGCCCGGGCTCGCGCCCCGGGTTTTGCGGC GACCGC AGCTATTCCCTTTAGTGAGGTAATTTAGGTG ]
[-] EMBL CB965099 [ CCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCGGCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCTCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGAC GCCGCTCCGCCCGGGCTCGCGCCCC GGTTTTGC GC GCCCGC AGCTATTCCC TTAGTGAGGTt ]
[-] EMBL CB964755 [ CTGTTCACCTTGTAGACCTGATTCGCTTATGACTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGTGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCGTCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCTCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGAC GCCGCTCCGCCCGGGCTCGCGCCCC GGTTTTGC GC G CCGC AGCTATTCCC TTAGTGAGGT ATTTAGct ]
[-] EMBL BU672892 [ ACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCGGCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCTCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGGCTCGCGCCCC GG TTGC GC G CCGCAAGCTATTCCC ATAGTGAGG ]
[-] EMBL BU673402 [ ACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCGGCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCTCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGAC GCCGCTCCGCCCGGGCTCGCGCCCC GGGTTTGC GC G CGCAAGCTATTCCC TTTATGAG ]
[-] EMBL BU672940 [ CTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCTCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGGCTCGCGCCCC GGTTTTGC GC G CCCA AGCTATTCCCTTTAGTGAGGAAATTTAGCTGCCTGCG]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||