cluster # 12145

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Oryza sativa
cluster # 12145 cluster # 12145 Sequences # 10 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12145#0 length = 1657 sequences # 10
consensusID : consensus_12145#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1657
fasta sequence
                              [GTTATCTGCGTCGTCGTCTGTCATCTCCTCCTCATCTTCTTGCTCTGCTCTGCTTCTTTCCTCCAGATACTGTTCCTCCTGCAGAAGCAGAAGCAGAAGGAGAAGGAGAATTGAAAGCAAGAAATTAAGTGAGAGGAGAAGAAGAGGAGGTAGGATATGGAGAAATACGAGCCAGTTCGGGAGATCGGGGCGGGCAACTTCGGGGTAGCGAAGCTGA-TGCGGAACAAGGAGACGCGGGAGCTGGTGGCGATGAAGTTCATCGAGAGAGGGAACAGGATCGACGAGAACGTGTTCCGGGAGATCGTGAATCATCGTTCGCTGCGTCACCCGAACATAATAAGGTTCAAGGAGGTGGTGGTGACGGGGAGGCATCTGGCGATCGTGATGGAGTACGCGGCGGGAGGGGAGCTGTTCGAGAGGATATGCGAGGCGGGGAGGTTCCACGAGGACGAGGCGCGCTACTTCTTCCAGCAGCTGGTGTGCGGGGTGAGCTACTGCCACGCCATGCAGATCTGCCACCGCGACCTCAAGCTGGAGAATACGCTGCTGGACGGCAGCCCGGCCCCGCGCCTCAAGATCTGCGACTTCGGCTACTCCAAGTCCTCCCTCCTCCACTCCCGCCCCAAATCCACCGTCGGCACCCCCGCCTACATCGCCCCCGAGGTCCTCTCCCGCCGCGAGTACGACGGCAAGCTCGCCGACGTCTGGTCCTGCGGCGTCACCCTCTACGTCATGCTCGTCGGCGCTTACCCTTTCGAGGATCCCAAGGACCCCAAGAACTTCAGAAAGACCATCTCGCGCATCATGTCCGTCCAGTACAAGATCCCCGAGTACGTCCACGTCTCCCAGCCCTGCCGCCACCTCCTCTCCCGCATCTTCGTCGCCAACCCCTACAAGCGCATCAGCATGGGCGAGATCAAGAGCCACCCCTGGTTCCTCAAGAACCTGCCGCGCGAGCTCAAGGAGGAGGCGCAGGCCGTCTACTACAACCGCCGGGGAGCCGATCAC-GCGGCTGCCAGCG-CAAGTAGTGCG---------GCTGCCTTCTCGCCGCAG-AGCGTGGAGGACATCATGAGGATCGTGCA-GGAGGCGCAGACCGTCCCCAAGCCCGACAAGCCCGTCTCTGG-CTAC-G-GCTGGGGCACC-G-A-CGAC-GACGA--CGACGACCAACAACCAGCTGAGGAGGAGGACGAAGAAGACGACTAC-GACAGGACGGTGCGCGAGGTTCACGCCAGCGTCGACC-TCGACATGTCAAACCTCCAAATCTCATGATCCATC-GTCGTCCATACTCCACTCCACTAGTGTTGTGTTCTTCTGACCAGCATCGATCATTTCGTTTTGGATCAACCCC-ATCTGCACTGATTGCATGCATTTTCTCATTCATACATAGATAGATACTCGATCGATCAGTCCCCAAACA-AACTTTGGGTACATTATTACATCACCTGTTTATATGAGTAAGGCAGCATTCATTGATGTAAATCTCCTCTGCTACGAGTAGCCTGTTATCATCTCTCTGCTTAATTGTGATCAGAATCAGAGACCACTAGATGATGGATGTAACTGCAGGGTATGTTCAGGCACAATCACCATTTTACTGTTACTTCAGAAGTGACAACTTTGATTTCGGAAAAAATAGTTATACTGTACTGCTCATTGGAAAAAAAAA]

[+] EMBL AK100269             [GTTATCTGCGTCGTCGTCTGTCATCTCCTCCTCATCTTCTTGCTCTGCTCTGCTTCTTTCCTCCAGATACTGTTCCTCCTGCAGAAGCAGAAGCAGAAGGAGAAGGAGAATTGAAAGCAAGAAATTAAGTGAGAGGAGAAGAAGAGGAGGTAGGATATGGAGAAATACGAGCCAGTTCGGGAGATCGGGGCGGGCAACTTCGGGGTAGCGAAGCTGA TGCGGAACAAGGAGACGCGGGAGCTGGTGGCGATGAAGTTCATCGAGAGAGGGAACAGGATCGACGAGAACGTGTTCCGGGAGATCGTGAATCATCGTTCGCTGCGTCACCCGAACATAATAAGGTTCAAGGAGGTGGTGGTGACGGGGAGGCATCTGGCGATCGTGATGGAGTACGCGGCGGGAGGGGAGCTGTTCGAGAGGATATGCGAGGCGGGGAGGTTCCACGAGGACGAGGCGCGCTACTTCTTCCAGCAGCTGGTGTGCGGGGTGAGCTACTGCCACGCCATGCAGATCTGCCACCGCGACCTCAAGCTGGAGAATACGCTGCTGGACGGCAGCCCGGCCCCGCGCCTCAAGATCTGCGACTTCGGCTACTCCAAGTCCTCCCTCCTCCACTCCCGCCCCAAATCCACCGTCGGCACCCCCGCCTACATCGCCCCCGAGGTCCTCTCCCGCCGCGAGTACGACGGCAAGCTCGCCGACGTCTGGTCCTGCGGCGTCACCCTCTACGTCATGCTCGTCGGCGCTTACCCTTTCGAGGATCCCAAGGACCCCAAGAACTTCAGAAAGACCATCTCGCGCATCATGTCCGTCCAGTACAAGATCCCCGAGTACGTCCACGTCTCCCAGCCCTGCCGCCACCTCCTCTCCCGCATCTTCGTCGCCAACCCCTACAAGCGCATCAGCATGGGCGAGATCAAGAGCCACCCCTGGTTCCTCAAGAACCTGCCGCGCGAGCTCAAGGAGGAGGCGCAGGCCGTCTACTACAACCGCCGGGGAGCCGATCAC GCGGCTTCCAGCG CAAGTAGTGCGGCTGCTGCAGCTGCCTTCTCGCCGCAG AGCGTGGAGGACATCATGAGGATCGTGCA GGAGGCGCAGACCGTCCCCAAGCCCGACAAGCCCGTCTCTGG CTAC G GCTGGGGCACC G A CGAC GACGA  CGACGACCAACAACCAGCTGAGGAGGAGGACGAAGAAGACGACTAC GACAGGACGGTGCGCGAGGTTCACGCCAGCGTCGACC TCGACATGTCAAACCTCCAAATCTCCTGATCCATC GTCGTCCATACTCCACTTCACTAGTGTTGTGTTCTTCTGACCAGCATCGATCATTTCGTTTTGGATCAACCCC ATCTGCACTGATTGCATGCATTTTCTCATTCATACATAGATAGATACTCGATCGATCAGTCCCCAAACA AACTTTGGGTACATTATTACATCACCTGTTTATATGAGTAAGGCAGCATTCATTGATGTAAATCTCCCCTGCTACGAGTAGCCTGTTATCATCTCTCTGCTTAATTGTGATCAGAATCAGAGACCACTAGATGATGGATGTAACTGCAGGGTATGTTCAGGCACAATCACCATTTTACTGTTACTTCAGAAGTGACAACT                                                 ]
[+] EMBL OSS14663A            [                                CATCTTCTTGCGNTGCTCTGCTTCTTTCCTCCAGATACTGTTCCTCCTGCAGAAGCAGAAGCAGAAGGAGAAGGAGAATTGAAAGCAAGAAATTAAGTGAGAGGAGAAGAAGAGGAGGTAGGATATGGAGAAATACGAGCCAGTTCGGGAGATCGGGGCGGGCAACTTCGGGGTAGCGAA NTGATTGCGGAACAAGGAGACGCGGGAGCTGGTGGCGATGAAGTTCATCGAGAGAGGGAACAGGATCGACGAGAACGTGTTCCGGGAGATCGTGAATCATCGTTCGCTGCGTCACCCGAACATAATAAGGTTCAAGGAGGTGGTGGTGACGGGGAGGCATCTGGCGATCGTNATGGAGTACGCGGCGGGAGGGGAGCTGTTCGAGAGGATATNCGAGGCGGGGAGGTTCCACGAGGACGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CA757395             [                                                                                                                                                                                                                                                                                                                                                                               AGGCATCTGGCGATCGTGATGGAGTACGCGGCGGGAGGGGAGCTGTTCGAGAGGATATGCGAGGCGGGGAGGTTCCACGAGGACGAGGCGCGCTACTTCTTCCAGCAGCTGGTGTGCGGGGTGAGCTACTGCCACGCCATGCAGATCTGCCACCGCGACCTCAAGCTGGAGAACACGCTGCTGGACGGCAGCCCGGCCCCGCGCCTCAAGATCTGCGACTTCGGCTACTCCAAGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CA762876             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTTCCTCAAGAACCTGCCGCGCGAGCTCAAGGAGGAGGCGCAGGCCGTCTACTACAACCGCCGGGGAGCCGATCAC GCGGCTGCCAGCG CAAGTAGTGCG         GCTGCCTTCTCGCCGCAG AGCGTGGAGGACATCATGAGGATCGTGCA GGAGGCGCAGACCGTCCCCAAGCCCGACAAGCCCGTCTCTGG CTAC G GCTGGGGCACC G A CGAC GACGA  CGACGACCAACAACCAGCTGAGGAGGAGGACGAAGAAGACGACTAC GACAGGACGGTGCGCGAGGTTCACGCCAGCGTCGACC TCGACATGTCAAACCTCCAAATCTCATGATCCATC GTCGTCCATACTCCACTCCACTAGTGTTGTGTTCTTCTGACCAGCATCGATCATTTCGTTTTGGATCAACCCC ATCTGCACTGATTGCATGCATTTTCTCATTCATACATAGATAGATACTCGATCGATCAGTCCCCAAACA AACTTTGGGTACATTATTACATCACCTGTTTATATGAGTAAGGCAGCATTCATTGATGTAAATCTCCTTTGCTACGAGTAGCCTGTTATCATCTCTCTGCTTAATTGTGATCAGAATCAGAGACCACTAGATGATGGATGTAACTGCAGGGTATGTTCAGGCACAATCACCATTTTACTGTTACTTCAAAAaaaa                                                      ]
[+] EMBL BI799853             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GAACCT CCGCGCGAGCTCAAGGAGGAGGCGCA GCCGTCTACTACAACCGCCGGGGAGCCGATCAC GC GCTGCCAGCG CAAGTAGTGC          GCTGCCTTCTCGCCGCAG AGCGTGGAGGACATCATGAGGATCGTGCA GGAGGCGCAGACCGTCCCCAAGCCCGACAAGCCCGTCTCTGG CTAC G GCTGGGGCACC G A CGAC GACGA  CGACGACCAACAACCAGCTGAGGAGGAGGACGAAGAAGACGACTAC GACAGGACGGTGCGCGAGGTTCACGCCAGCGTCGACC TCGACATGTCAAACCTCCAAATCTCATGATCCATC GTCGTCCATACTCCACTCCACTAGTGTTGTGTTCTTCTGACCAGCATCGATCATTTCGTTTTGGATCAACCCC ATCTGCACTGATTGCATGCATTTTCTCATTCATACATAGATAGATACTCGATCGATCAGTCCCCAAAC  AACTTTGGGTACATTATTACATCACCTGTTTATATGAGTAAGGCAGCATTCATTGATGTAAAaaa                                                                                                                                                                                        ]
[+] EMBL BQ906796             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGATCACNGCGCGTGCCAGCGTCAAGTAGTTCG         GCTGCCTTCTCTCCGCAGTAGCGTGGAGGACATCATGAGGATTGTCCACGGAGGCGCAGACCGTCCCCAAGCCCGACAAGCCCGTCTCTGGTCTACTGTGCTGGGGCACCAGTATCGACAGACGAATCGACGACCAACAACCAGCTGAGGAGGAGGACGAAGAAGACGACTACAGACAGGNCGGTGCGCGAGGTTCACGCCAGCGTCGACCGTCGACATGTCAAACCTCCAAATCTCATGATCCATCTGTCGTCCATACTCCACTCCACTAGTGTTGTGTTCTTCTGACCAGCATCGATCATTTCGTTTTGGATCAACCCC ATCTGCACTGATTGCANGCATTTTNTCATTCATACATAGATAGATACTCGATCGATCAGTCCCCAAACA AACTTTGGGTACATTATTACATCACCTGTTTATATGAGTAAGGCAGCATTCATTGAaaaa                                                                                                                                                                                             ]
[+] EMBL BM420987             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAATTAGT C          GCTCCCTTCTCGCCGCAG AGCGTGGAGGACATCATGAGGATCGTGCA GGAGGCGCAGACCGTCCCCAAGCCCGACAAGCCCGTCTCTGG CTAC G GCT GGGCACC G A CGAC GACGA  CGACGACCAACAACCAGCTGAGGAGGAGGACGAAGAAGACGACTAC GACAGGACGGTGCGCGAGGTTCACGCCAGCGTCGACC TCGACATGTCAAACCTCCAAATCTCATGATCCATC GTCGTCCATACTCCACTCCACTAGTGTTGTGTTCTTCTGACCAGCATCGATCATTTCGTTTTGGATCAACCCC ATCTGCACTGATTGCATGCATTTTCTCATTCATACATAGATAGATACTCGATCGATCAGTCCCC AACA AACTTTGGGTACATTATTACATCACCTGTTTATATGAGTAAGCCAGCATTCATTGATGT AATCTCCTCTGCTACGAGTAGCCTGTTATCATCTCTCTGCTTAATTGTGATCAGAATCAGAGACCACTAGATGATGGATGTAACTGCAaaaa                                                                                                 ]
[+] EMBL BE040544             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCTGGGGCACC G A CGAC GACGA  CGACGACCAACAACCAGCTGAGGAGGAGGACGAAGAAGACGACTAC GACAGGACGGTGCGCGAGGTTCACGCCAGCGTCGACC TCGACATGTCAAACCTCCAAATCTCATGATCCATC GTCGTCCATACTCCACTCCACTAGTGTTGTGTTCTTCTGACCAGCATCGATCATTTCGTTTTGGATCAACCCC ATCTGCACTGATTGCATGCATTTTCTCATTCATACATAGATAGATACTCGATCGATCAGTCCCCAAACA AACTTTGGGTACATTATTACATCACCTGTTTATATGAGTAAGGCAGCATTCATTGATGTAAATCTCCTCTGCTACGAGTAGCCTGTTATCATCTCTCTGCTTAATTGTGATCAGAATCAGAGACCACTAGATGATGGATGTAACTGCAGGGTATGTTCAGGCACAATCACCATTTTACTGTTACTTCAGAAGTGACAACTTTGATTTCGGAATTCATAGTTATACTGTACTGCTCATTGGAAAAAAAAA]
[+] EMBL C22640               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GAAGACGACTAC GACAGGACGGTGCGCGAGGTTCACGCCAGCGTCGACC TCGACATGTCAAACCTCCAAATCTCCTGATCCATC GTCGTCCATACTCCACTTCACTAGTGTTGTGTTCTTCTGACCAGCATCGATCATTTCGTTTTGGATCAACCCC ATCTGCACTGATTGCATGCATTTTCTCATTCATACATAGATAGATACTCGATCGATCAGTCCCCAAACA AACTTTGGGTACATTATTACATCACCTGTTTATATGAGTAAGGCAGCATTCATTGATGTAAATCTCCCCTGCTACGAGTAGCCTGTTATCATCTCTCTGCTTAATTGTGATCAGAATCAGAGACCACTAGATGATGGATGTAACTGCAGGGTATGTTCAGGCACAATCACCATTTTACTGTTACTTCAGAAGTGACAACTTTGATTTCGGAAAAAAa                                ]
[+] EMBL BI809319             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CGATCATTTCTTTTTGGATCAACCCCAATCTGCACTGATTGCATGCATTTTCTCATTCATACATAGATAGATACTCGATCGATCAGTCCCCAAACACAACTTTGGGTACATTATTACATCACCTG TTATATGAGTAA GCAGCATTCATTGATGTAAATCTCCTCTGCTACGAGTAGCCTGTTATCATCTCTCTGCTTAATTGTGATCAGAATCAGAGACCACTAGATGATGGATGTAACTGCAGGGTATGTTCAGGCACAATCACCATTTTACTGTTACTTCAGAAGTGACAACTTTGATTTCGGAAAAAA                                 ]




>consensus_12145#0
GTTATCTGCGTCGTCGTCTGTCATCTCCTCCTCATCTTCTTGCTCTGCTCTGCTTCTTTC
CTCCAGATACTGTTCCTCCTGCAGAAGCAGAAGCAGAAGGAGAAGGAGAATTGAAAGCAA
GAAATTAAGTGAGAGGAGAAGAAGAGGAGGTAGGATATGGAGAAATACGAGCCAGTTCGG
GAGATCGGGGCGGGCAACTTCGGGGTAGCGAAGCTGATGCGGAACAAGGAGACGCGGGAG
CTGGTGGCGATGAAGTTCATCGAGAGAGGGAACAGGATCGACGAGAACGTGTTCCGGGAG
ATCGTGAATCATCGTTCGCTGCGTCACCCGAACATAATAAGGTTCAAGGAGGTGGTGGTG
ACGGGGAGGCATCTGGCGATCGTGATGGAGTACGCGGCGGGAGGGGAGCTGTTCGAGAGG
ATATGCGAGGCGGGGAGGTTCCACGAGGACGAGGCGCGCTACTTCTTCCAGCAGCTGGTG
TGCGGGGTGAGCTACTGCCACGCCATGCAGATCTGCCACCGCGACCTCAAGCTGGAGAAT
ACGCTGCTGGACGGCAGCCCGGCCCCGCGCCTCAAGATCTGCGACTTCGGCTACTCCAAG
TCCTCCCTCCTCCACTCCCGCCCCAAATCCACCGTCGGCACCCCCGCCTACATCGCCCCC
GAGGTCCTCTCCCGCCGCGAGTACGACGGCAAGCTCGCCGACGTCTGGTCCTGCGGCGTC
ACCCTCTACGTCATGCTCGTCGGCGCTTACCCTTTCGAGGATCCCAAGGACCCCAAGAAC
TTCAGAAAGACCATCTCGCGCATCATGTCCGTCCAGTACAAGATCCCCGAGTACGTCCAC
GTCTCCCAGCCCTGCCGCCACCTCCTCTCCCGCATCTTCGTCGCCAACCCCTACAAGCGC
ATCAGCATGGGCGAGATCAAGAGCCACCCCTGGTTCCTCAAGAACCTGCCGCGCGAGCTC
AAGGAGGAGGCGCAGGCCGTCTACTACAACCGCCGGGGAGCCGATCACGCGGCTGCCAGC
GCAAGTAGTGCGGCTGCCTTCTCGCCGCAGAGCGTGGAGGACATCATGAGGATCGTGCAG
GAGGCGCAGACCGTCCCCAAGCCCGACAAGCCCGTCTCTGGCTACGGCTGGGGCACCGAC
GACGACGACGACGACCAACAACCAGCTGAGGAGGAGGACGAAGAAGACGACTACGACAGG
ACGGTGCGCGAGGTTCACGCCAGCGTCGACCTCGACATGTCAAACCTCCAAATCTCATGA
TCCATCGTCGTCCATACTCCACTCCACTAGTGTTGTGTTCTTCTGACCAGCATCGATCAT
TTCGTTTTGGATCAACCCCATCTGCACTGATTGCATGCATTTTCTCATTCATACATAGAT
AGATACTCGATCGATCAGTCCCCAAACAAACTTTGGGTACATTATTACATCACCTGTTTA
TATGAGTAAGGCAGCATTCATTGATGTAAATCTCCTCTGCTACGAGTAGCCTGTTATCAT
CTCTCTGCTTAATTGTGATCAGAATCAGAGACCACTAGATGATGGATGTAACTGCAGGGT
ATGTTCAGGCACAATCACCATTTTACTGTTACTTCAGAAGTGACAACTTTGATTTCGGAA
AAAATAGTTATACTGTACTGCTCATTGGAAAAAAAAA
clustalw multiple alignements is not computed in this case