These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12147#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1861 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATTCCCACAAAATCTTCGGGTTAATATTTCCCTTGAAAATTTCACATGAAAAATGGGGGGATTAATGAAACAACCTTTGCTAGAAAGTACAGAGCAAAAGCAGCACGTTCAGTTCACCCGACCTTGCTGGCAAGTGGCATCACAAGAGTGCACATCTCATGATTCATGATGGCATTCCAACTTAGCTTAAGGTGTCAACTGTCAACAACCCATTGCATAAAGCTGTTCTACAATATATAACTGCTACATTTTAGTCAACCTATACTACAGAAGTATCAGAGTGAGACATCAGCTGCTGATTATGTACACGTTTCAGGCATCCAGTACAACAGTAGCCTGATTTCCAGTACCAGTGCAGTCTAGATATAAAAGGTTTGTGTGCAAAAGAACTCCTAGGTTATACAGAACATTATCCACCATTCATCCTGCACTTGATGTCTGGTAGCGTTCTCCAATACTGATTCAAAGATTGGGGCAGTACTGCAGCCAAAGTACCCCACGATTCAGGCAGAATGCTCAAGATCTCTTCCTCTTTTCGCTCTTTCGCAGACGTCCTCTTCTTCCTTTACGGGGCGTATCATGTATTTGCAGCTTAGCAGCAGCAGTCACAGCAACTGAGCCAACATTTTCCTGAGAAATAAGGCCTGTGGGACATGTGACATTTTTATTTGGTATAACGTTCTCAGAGAATGTATTGTCTTGCATCCTCGCCCTCTTGTAGACCTTTTTTGTTGAAGCACTAGTTGGAATTACGATCACTTTGCC-ATTCCGTAATCGCCTGACTGTACTGCCTTCTGAGCCTTGAGGAACACCAANACTGTGGATTCATCCCTTCATTTGTTTCTAATGCATCCTTAGTACCCAGGTGTGTTAAGGATTTGCCACATTTTGGTGTTGCACAATCTCCTAAGACAGAGGATACATGACTTGTACTATCATTAACTAATAAAGCATCCTGCTCTGCCTTACTCCTCACATACTTTTCTGCAGGAACTACAGATGGTCCTACACTTGATGTTCCATGCTGAACTTTATTCCCATTCTCACATGTATTCATGAGCATACATAAATGCTGGTTATTTTCTTGATCATTACCACATGTTTCACTAGGGGTTGCACGAGGTTCTTCAGGCATGACCATTCTGCCAGTGCAAAACTCCTCAGAAGTGGCCAATGTGCCCATGAAATTAACATTACAATCTGTATTTGCAGTAGGATCCTCAACAGTAGG-CTTCCATTAGAAGAATTAGAAAGCCTCTCGCTAGGAAATCTGTCTGCATCACTTCTAGACCCCTGATATATGTTGAGACCATCCCAAGAGAAAAGTCCCATTGAATATTTTAAGTTTCCCCGCAAAAACTTTTCTATATAATATTCAGTAGATTTTAGTGGAGATTGCGGCTGCTTGTTCATCTCTGCCATGTTTGCATTAATAATATTCTCCCATTGAACCGGAAAGCCAAGTGAGAAGTGTTTGGACACCTCGTCAGGAAATCCATTCAGATGCATTTTAGAAATGTTCGGTGGACGTGCAATCATTATGATGATACCATCTTCAGTCTCAAGGTCACCACTAGCATGCCGTGTTTTAATGGAAGCAGAAGTGAATCTTCTACCAGCTCGACTCGTCGTGGTGTTGGAGCCGACGACGCGGACCTTGCCTTCCTCGCCTTCAACCCTCTCCAGCCACCAGTCGTCGAGCTCGACGCAGGCCTGCAAGTAGGACACGGCGGGGGCCTCCTTCGCCGCCGCCGCCGCCGTCGCGCCGTCGCCGGCTCGGGGTTGGGTCGCCATCTCCGGCGGTGGAGAGGGGAACGAGTTTTCCCCGCTT] [+] EMBL CF328528 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATTCCCACAAAATCTTCGGGTTAATATTTCCCTTGAAAATTTCACATGAAAAATGGGGGGATTAATGAAACAACCTTTGCTTGAAAGTACAGAGCAAAAGCCGCACGTTCAGTTCACCCGACCTTGCTGGCAAGTGGGATTACAAGAGTGCACATCTCATGATTCATGATGGCATTCCAACTTAACTTAAGGGGGCAACTGGCAACAACCCATTGCATAAAGCTGGTCTACAATATATAACTGCTACATTTTAGTC ] [+] EMBL CA759839 [ CCCACAAAATCTTCGTGTTTATATTTCTCTTGAAAATTTCACATGAAAAATGAGGAGATTAATGAAACAACCTTTGCTAGAAAGTACAGAGCAAAAGCAGCACGTTCAGTTCACCCGACCATGCTGGCAAGTGGCATCACAAGAGTGCACATCTCATGATTCATGATGGCATTCCTACTTAGCTTAAGGTGTCAACTGTCAACAACCCATTGCATAAAGCTGTCCTACAATATATAACTGCTACATTTTAGTCAACCTATACTACAGAAGTATCAGAGTGAGACATCAGCTGCTGATTATGTACACGTTTCAGGCATCCAGTACAACAGTAGCCTGATTTCCAGTACCAGTGCAGTCTAGATATAAAAGGTTTGTGTGCAAAAGAACTCCTAGGTTATACAGAACATTATCCACCATTCATCCTGCACTTGATGTCTGGTAGCGTTCTCCAATACTGATTCAAAGATTGGGGTAGTACTGCAGCCAAAGTACCCCACGATTCANGCAGAATGCTCAAGATCTCTTCCTCTTTTCGCTCTTTCGCAGACGTCCTCTTCTTCCTTTACGGNGCGTATCATGTATTTGCAGCTTAGCAGCAGCAGTCACAGCAACTGAGCCAACATTTTCCTGAGAAATAAGGCCTGTGGGACATGTGACATTTTTATTTGGTATAACGTTCTCAGAGAATG ] [+] EMBL AU225806 [ gccgctAAACAACCTTTGCTAGAAAGTACAGAGCAAAAGCAGCACGTTCAGTTCACCCGACCTTGCTGGCAAGTGGCATCACAAGAGTGCACATCTCATGATTCATGATGGCATTCCAACTTAGCTTAAGGTGTCAACTGTCAACAACCCATTGCATAAAGCTGTTCTACAATATATAACTGCTACATTTTAGTCAACCTATACTACAGAAGTATCAGAGTGAGACATCAGCTGCTGATTATGTACACGTTTCAGGCATCCAGTACAACAGTAGCCTGATTTCCAGTACCAGTGCAGTCTAGATATAAAAGGTTTGTGTGCAAAAGAACTCCTAGGTTATACAGAACATTATCCACCATTCATCCTGCACTTGATGTCTGGTAGCGTTCTCCAATACTGATTCAAAGATTGGGGCAGTACTGCAGCCAAAGTACCCCACGATTCAGGCAGAATGCTCAAGATCTCTTCCTCTTTTCGCTCTTTCGCAGACGTTCTCTTCTTCCTTTACGGGGCGTATCATGTATTTGCAGCTTAGCAGCAGCAGTCACAGCAACTGAGCC ACATTTTCCTGAGAAATAAGGCCTGTGGGACATG ] [+] EMBL CF327338 [ tttttTCTCATGATTCATGATGGCATTCCAACTTAGCTTAAGGTGTCAACTGTCAACAACCCATTGCATAAAGCTGTTCTACAATATATAACTGCTACATTTTAGTCAACCTATACTACAGAAGTATCAGAGTGAGACATCAGCTGCTGATTATGTACACGTTTCAGGCATCCAGTACAACAGTAGCCTGATTTCCAGTACCAGTGCAGTCTAGATATAAAAGGTTTGTGTGCAAAAGAACTCCTAGGTTATACAGAACATTATCCACCATTCATCCTGCACTTGATGTCTGGTAGCGTTCTCCAATACTGATTCAAAGATTGGGGCAGTACTGCAGCCAAAGTACCCCACGATTCAGGCAGAATGCTCAAGACCTCTTCCTCTTTTCGCTCTTTCGCAGACGTCCTCTTCTTCCTTTACGGGGCGTATCATGTATTTGCAGCTTAGCAGCAGCAGTCACAGCAACTGAGCCAACATTTTCCTGAGAAATAAGGCCTGTGGGACATGTGACATTTTTATTTGGTATAACGTTCTCAGAGAATGTATTGTCTTGCATCC ] [-] EMBL C96753 [ ttttttgTTCA GNTGGCATTCCAACTTAGCTTAAGGTGTCAACTGTCAACAACCCATTGCATAAAGCTGTTCTACAATATATAACTGCTACATTTTAGTCAACCTATACTACAGAAGTATCAGAGTGAGACATCAGCTGCTGATTATGTACACGTTTCAGGCATCCAGTACAACAGTAGCCTGATTTCCAGTACCAGTGCAGTCTAGATATAAAAGGTTTGTGTGCAAAAGAACTCCTAGGTTATACAGAACATTATCCACCATTCATCCTGCACTTGATGTCTGGTAGCGTTCTCCAATACTGATTCAAAGATTGGGGCAGTACTGCAGCCAAAGTACCCCACGATTCAGGCAGAATGCTCAAGATCTCTTCCTCTTTTCGCTCTTTCGCAGACGTCCTCTTCTTCCTTTACGGGGCGTATCATGTATTTGCAGCTTAGCAGCAGCAGTCACAGCAACTGAGCCAACATTTTCCTGAGAAATAAGGCCTGTGGGACATGTGACATTTTTATTTGGTATAACGTTCTCAGAGAATGTATTGTCTTGNAACCTCGCCCTCTTGTAGACCTTTTTTGTTGAAGCACTAGTTGGAATTACGATCACTTTGCCAATTCCGTAATCG ] [-] EMBL CF327337 [ GTATCATGTATTTGCAGCTTAGCAGCAGCAGTCACAGCAACTGAGCCAACATTTTCCTGAGAAATAAGGCCTGTGGGACATGTGACATTTTTATTTGGTATAACGTTCTCAGAGAATGTATTGTCTTGCATCCTCGCCCTCTTGTAGACCTTTTTTGTTGAAGCACTAGTTGAAATTACGATCACTTTGCC ATTCCGTAATCGCCTGACTGTACTGCCTTCTGAGCCTTGAGGAACACCAANACTGTGGATTCATCCCTTCATTTGTTTCTAATGCATCCTTAGTACCCAGGTGTGTTAAGGATTTGCCACATTTTGGTGTTGCACAATCTCCTAAGACAGAGGATACATGACTTGTACTATCATTAACTAATAAAGCATCCTGCTCTGCCTTACTCCTCACATACTTTTCTGCAGGAACTACAGATGGTCCTACACTTGATGTTCCATGCTGAACTTTATTCCCATTCTCACATGTATTCATGAGCATACATAAATGCTGGTTATTTTCTTGATCATTACCACATGTTTCACTAGGGGTTGCACGAGGTTCTTCAGGCATGACCATTCTGCCAGTGCAAAACTCCTCAGAAGTGGCCAATGTGCCCATGAAATTAACATTACAA ] [-] EMBL AF074786 [ caACATGTTTCATTA GGGTTGCAGGA GTTTTTCAGGCATGTCCATTCTGCCAGTGCAAAANTCTTCAGAAGTGGCCAATGTGCCCATGAAATTAACATTACAATCTGTATTTGCAGTAGGATCTTCAACAGTAGGTCTTCCATTAGAAGAATTAGAAAGCNTCTCGNTAGGAAATCTGTNTGCATCANTTCTAGACCCCTGATATATGTTGAGACCATCCCAAGAGAAAAGTCCCATTGAATATTTTAAGTTTCCCCGCAAAAACTTTTNTATATAATATTCAGTAGATTTTAGTGGAGATTGCGGCTGCTTGTTCATNTCTGCCATGTTTGCATTAATAATATTCTCCCATTGAACCGGAAAGCCAAGTGAGAAGTGTTTGGACACCTCGTCAGGAAATCCATTCAGATGCATTTTAGAAATGTTCGGTGGACGTGCAATCATTATGATGATACCATCTTCAGTCTCAAGGTCACCACTAGCATGCCGTGTTTTAATGGAAGCAGAAGTGAATCTTCTACCAGCTCGACTCGTCGTGGTGTTGGAGCCGACGACGCGGACCTTGCCTTCCTCGCCTTCAACCCTCTCCAGCCACCAGTCGTCGAGCTCGACGCAGGCCTGCAAGTAGGACACGGCGGGGGCCTCCTTCGCCGCCGCCGCCGC CGCGCCGTCGCCGGCTCGGGGTTGG ] [-] EMBL C26490 [ ctnaGCATGNCCATTCTGCCAGTGC AAACTCCTCAGAAGTGGCCAATGTGCCCATG AATTAACATTACAATCTGTATTTGCAGTAGGATCCTCAACAGTAGG CCTCCATTAGAAGAATTAGAAAGCCTCTCGCTAGGAAATCTGTCTGCATCACTTCTAGACCCCTGATATATGTTGAGACCATCCCAAGAGAAAAGTCCCATTGAATATTTTAAGTTTCCCCGCAAAAACTTTTCTATATAATATTCAGTAGATTTTAGTGGAGATTGCGGCTGCTTGTTCATCTCTGCCATGTTTGCATTAATAATATTCTCCCATTGAACCGGAAAGCCAAGTGAGAAGTGTTTGGACACCTCGTCAGGAAATCCATTCAGATGCATTTTAGAAATGTTCGGTGGACGTGCAATCATTATGATGATACCATCTTCAGTCTCAn ] [-] EMBL AK111105 [ CATTACAATCTGTATTTGCAGTAGGATCCTCAACAGTAGGTCTTCCATTAGAAGAATTAGAAAGCCTCTCGCTAGGAAATCTGTCTGCATCACTTCTAGACCCCTGATATATGTTGAGACCATCCCAAGAGAAAAGTCCCATTGAATATTTTAAGTTTCCCCGCAAAAACTTTTCTATATAATATTCAGTAGATTTTAGTGGAGATTGCGGCTGCTTGTTCATCTCTGCCATGTTTGCATTAATAATATTCTCCCATTGAACCGGAAAGCCAAGTGAGAAGTGTTTGGACACCTCGTCAGGAAATCCATTCAGATGCATTTTAGAAATGTTCGGTGGACGTGCAATCATTATGATGATACCATCTTCAGTCTCAAGGTCACCACTAGCATGCCGTGTTTTAATGGAAGCAGAAGTGAATCTTCTACCAGCTCGACTCGTCGTGGTGTTGGAGCCGACGACGCGGACCTTGCCTTCCTCGCCTTCAACCCTCTCCAGCCACCAGTCGTCGAGCTCGACGCAGGCCTGCAAGTAGGACACGGCGGGGGCCTCCTTCGCCGCCGCCGCCGCCGTCGCGCCGTCGCCGGCTCGGGGTTGGGTCGCCATCTCCGGCGGTGGAGAGGGGAACGAGTTTTCCCCGCTT] [-] EMBL OSC106451 [ AGATGCATTTTAGAAATGTTCGGTGNACGTGCAATCATTATGATGATACCATCTTCAGTCTCAAGGTCACCACTAGCATGCCGTGTTTTAATGGAAGCAGAAGTGAATCTTCTACCAGCTCGACTCGTCGTGGTGTTGGAGCCGACNACGCGGACCTTGCCTTCCTCGCCTTCAACCCTCTCCAGCCACCAGTCGTCGAGCTCNACGCAGGCCTGCAAGTAGGACACGGCGGGGGCCTCCTTCGCCGCCGCCGCCGCCGCCGCG CGTCGCCGGCTCGGGGTTGGGTCGCCATCTCCGGCGGTGGAGAG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||