cluster # 1215

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Oryza sativa
cluster # 1215 cluster # 1215 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1215#0 length = 727 sequences # 2

consensusID : consensus_1215#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 727
fasta sequence

                              [CTGTGCACCGCTCTCTCACAATGTCGACCGCCGCCGCCGCCGCCGCTGCCCAGAGCTGGTGCTTCGCCACTGTCACCCCGCGCTCCCGCGCCACAGTCGTCGCCAGCCTCGCCTCCCCATCACCGTCCTCCTCCTCCTCCTCCTCCAACAGCAGCAACCTCCCGGCCCCCTTCCGCCCCCGCCTCATCCGCAACACCCCCGTCTTCGCCGCCCCCGTCGCCCCCGCCGCGTGATCCGGGAGGCCCCGACGACCGCCATCGAACGGAAGGGAAAAAAAAAAGTCAAAAACTAGAGCCGATCGTTTGATCCATTCGATATACGGAAGATGAGTGGATGCCTCTGCCTCCCCCGCTATGAAAAGGCCCCAAACGGGAGGCCATCGCCACCACCACCACCATCAGCGGCCGAAGCGGAAGCAGCAGCATCAGCAGCGGCGACGAAGCCGTCCATAGATTCTTCTTCCTCCCCGTCACTCCTCACCAACAACCATCCCCCACCCTCCAAGATGGACGCCGCCGTCAACCGCCTCAAGGATGGGTTCGCCAAGTTCAAGACCGAGTTCTATGACAAGAAGCCGGAGCTCTTCGAGCCGCTCAAGGCCGGCCAGGCACCCAAGTACATGGTGATCTCGTGCGCCGACTCTCGCGTGTGCCCGTCGGTGACCATGGGCCTGGAGCCCGGCGAGGCCTTCACCGTCCGCAACATCGCCAACATGGTCCCAGCTTAC]

[+] EMBL CB661449             [CTGTGCACCGCTCTCTCACAATGTCGACCGCCGCCGCCGCCGCCGCTGCCCAGAGCTGGTGCTTCGCCACTGTCACCCCGCGCTCCCGCGCCACAGTCGTCGCCAGCCTCGCCTCCCCATCACCGTCCTCCTCCTCCTCCTCCTCCAACAGCAGCAACCTCCCGGCCCCCTTCCGCCCCCGCCTCATCCGCAACACCCCCGTCTTCGCCGCCCCCGTCGCCCCCGCCGCGTGATCCGGGAGGCCCCGACGACCGCCATCGAACGGAAGGGAAAAAAAAAAGTCAAAAACTAGAGCCGATCGTTTGATCCATTCGATATACGGAAGATGAGTGGATGCCTCTGCCTCCCCCGCTATGAAAAGGCCCCAAACGGGAGGCCATCGCCACCACCACCACCATCAGCGGCCGAAGCGGAAGCAGCAGCATCAGCAGCGGCGACGAAGCCGTCCATAGATTCTTCTTCCTCCCCGTCACTCCTCACCAACAACCATCCCCCACCCTCCAAGATGGACGCCGCCGTCAACCGCCTCAAGGATGGGTTCGCCAAGTTCAAGACCGAGTTCTATGACAAGAAGCCGGAGCTCTTCGAGCCGCTCAAGGCCGGCCAGGCACCCAAGTACATGGTGATCTCGTGCGCCGACTCTCGCGTGTGCCCGTCGGTGACCATGGGCCTGGAGCCCGGCGAGGCCTTCACCGT                               ]
[+] EMBL CF315059             [                                                                                                                                                                                                                                                                                                                                                                    AAAAGGCCCCAAACGGGACGCCATCGCCACCACCACCAGCAGCAGCGGCCGAAGCGGAAGCAGCAGCAGCAGCAGCGGCGACGAAGCCGTCCATAGATTCTTCTTCCTCCCCGTCACTCCTCACCAACAACCATCCCCCACCCTCCAAGATGGACGCCGCCGTCGACCGCCTCAAGGATGGGTTCGCCAAGTTCAAGACCGAGTTCTATGACAAGAAGCCGGAGCTCTTCGAGCCGCTCAAGGCCGGCCAGGCACCCAAGTACATGGTGTTCTCGTGCGCCGACTCTCGCGTGTGCCCGTCGGTGACCATGGGCCTGGAGCCCGGCGAGGCCTTCACCGTCCGCAACATCGCCAACATGGTCCCAGCTTAC]




>consensus_1215#0
CTGTGCACCGCTCTCTCACAATGTCGACCGCCGCCGCCGCCGCCGCTGCCCAGAGCTGGT
GCTTCGCCACTGTCACCCCGCGCTCCCGCGCCACAGTCGTCGCCAGCCTCGCCTCCCCAT
CACCGTCCTCCTCCTCCTCCTCCTCCAACAGCAGCAACCTCCCGGCCCCCTTCCGCCCCC
GCCTCATCCGCAACACCCCCGTCTTCGCCGCCCCCGTCGCCCCCGCCGCGTGATCCGGGA
GGCCCCGACGACCGCCATCGAACGGAAGGGAAAAAAAAAAGTCAAAAACTAGAGCCGATC
GTTTGATCCATTCGATATACGGAAGATGAGTGGATGCCTCTGCCTCCCCCGCTATGAAAA
GGCCCCAAACGGGAGGCCATCGCCACCACCACCACCATCAGCGGCCGAAGCGGAAGCAGC
AGCATCAGCAGCGGCGACGAAGCCGTCCATAGATTCTTCTTCCTCCCCGTCACTCCTCAC
CAACAACCATCCCCCACCCTCCAAGATGGACGCCGCCGTCAACCGCCTCAAGGATGGGTT
CGCCAAGTTCAAGACCGAGTTCTATGACAAGAAGCCGGAGCTCTTCGAGCCGCTCAAGGC
CGGCCAGGCACCCAAGTACATGGTGATCTCGTGCGCCGACTCTCGCGTGTGCCCGTCGGT
GACCATGGGCCTGGAGCCCGGCGAGGCCTTCACCGTCCGCAACATCGCCAACATGGTCCC
AGCTTAC

clustalw multiple alignements is not computed in this case