cluster # 12163

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Oryza sativa
cluster # 12163 cluster # 12163 Sequences # 10 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12163#0 length = 1326 sequences # 9

consensus_12163#1 length = 247 sequences # 1

consensusID : consensus_12163#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1326
fasta sequence

                              [CAAACCGCGAAACAAACCACCCCCGCATCTCTCTCTCTCTCTCTCTTCGTCGAGCTCCTCCTCCTCCGCTGCTGCTGCCGCCCATGGCTTCGTCGTCGAAGAGGAGAGGCGGGGCTGGAGGTGGAGGAGCGGAGAAGAAGGACCTCTTCCATGTCGTCCACAAGGTGCCCGCAGGGGACAGCCCGTACGTCAGAGCCAAGCACCTGCAGCTTGTCGATAAGGATCCGGAGACAGCCATCGTGTGGTTCTGGAAGGCGATCAACTCCAGGGACAAGGTGGATAGTGCCCTGAAGGACATGGCTGTGGTGATGAAGCAGCAGGATCGCGCCAAGGAGGCGATAGAAGCCATCAGATCATTCAGGCACCTCTGCTCAAGGCAGGCTCAGGAGTCCCTTGACAACCTTCTGATCGACCTCTACAAGAAATGTGGCAAAGTCGATGAACAGATCGATCTACTGAAACAGAAGCTGAAGATGATATACCTTGGAGAGGCCTTCAACGGGAAGGCGACCAAGACAGCACGTTCCCATGGGAAAAAGTTCCAGGTCTCTATCCAGCAGGAGACTTCTCGCATTCTGGGCAATCTTGGCTGGGCTTACATGCAGCAGAGCAACTATTCAGCCGCTGAATTGGTGTATCGCAAGGCGCAAAGCATTGAGCCTGATGCCAATAGGGCATGCAACCTTGGGCTGTGCCTAATTAAGCAGAGCAGGCATGATGAAGCAAGACAAGTACTTCATGATGTTGTGCTACGCAGAATCTCCGGATCGGAAGATGACAAGGTGGTAGCCCGAGCTAAGCAGCTTCTCCATGAACTTGAGCCGGTGACGCATGTTACGTCGCCAAATAATGCTGGGCTGAGTGTCAGTGAAGAGATCATGGAGAGACTAGACCTTGTGTTGAACGAATGGACGCCGTTCAGGTCAAGGAGGCTGCCGGTATTTGAGGAGATAGCTACCTTAAGGGACCAAATTGCTTGTTGATCCCTTTATTCGCAAGGTTTTTGTTCTTTTGCTTAATGTGCATACGGGTGCGTTGCCTTAGAAATTCATGTGCATATGTAGAGGCTGTTGTGGGCTTGTGGCAGTGCGAGTAATGGAGTAAAGGTTGTGATGTTCAGATAGATATCATATAGCTAGAGATCATGCAAAGCATCCAAGGAATAGTGTATTTTGTCTTCATGTTCTATGATGCTTATAATGTGTTGTAAACATTCTACAGACTACAAGAAATCCAAGTGTACACTTCACTTGGCTTGTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK122090             [CAAACCGCGAAACAAACCACCCCCGCATCTCTCTCTCTCTCTCTCTTCGTCGAGCTCCTCCTCCTCCGCTGCTGCTGCCGCCCATGGCTTCGTCGTCGAAGAGGAGAGGCGGGGCTGGAGGTGGAGGAGCGGAGAAGAAGGACCTCTTCCATGTCGTCCACAAGGTGCCCGCAGGGGACAGCCCGTACGTCAGAGCCAAGCACCTGCAGCTTGTCGATAAGGATCCGGAGACAGCCATCGTGTGGTTCTGGAAGGCGATCAACTCCAGGGACAAGGTGGATAGTGCCCTGAAGGACATGGCTGTGGTGATGAAGCAGCAGGATCGCGCCAAGGAGGCGATAGAAGCCATCAGATCATTCAGGCACCTCTGCTCAAGGCAGGCTCAGGAGTCCCTTGACAACCTTCTGATCGACCTCTACAAGAAATGTGGCAAAGTCGATGAACAGATCGATCTACTGAAACAGAAGCTGAAGATGATATACCTTGGAGAGGCCTTCAACGGGAAGGCGACCAAGACAGCACGTTCCCATGGGAAAAAGTTCCAGGTCTCTATCCAGCAGGAGACTTCTCGCATTCTGGGCAATCTTGGCTGGGCTTACATGCAGCAGAGCAACTATTCAGCCGCTGAATTGGTGTATCGCAAGGCGCAAAGCATTGAGCCTGATGCCAATAGGGCATGCAACCTTGGGCTGTGCCTAATTAAGCAGAGCAGGCATGATGAAGCAAGACAAGTACTTCATGATGTTGTGCTACGCAGAATCTCCGGATCGGAAGATGACAAGGTGGTAGCCCGAGCTAAGCAGCTTCTCCATGAACTTGAGCCGGTGACGCATGTTACGTCGCCAAATAATGCTGGGCTGAGTGTCAGTGAAGAGATCATGGAGAGACTAGACCTTGTGTTGAACGAATGGACGCCGTTCAGGTCAAGGAGGCTGCCGGTATTTGAGAAGATAGCTACCTTAAGGGACCAAATTGCTTGTTGATCCCTTTATTCGCAAGGTTTTTGTTCTTTTGCTTAATGTGCATACGGGTGCGTTGCCTTAGAAATTCATGTGCATATGTAGAGGCTGTTGTGGGCTTATGGCAGTGCGAGTAATGGAGTAAAGGTTGTGATGTTCAGATAGATATCATATAGCTAGAGATCATGCAAAGCATCCAAGGAATAGTGTATTTTGTCTTCATGTTCTATGATGCTTATAATGTGTTGTAAACATTCTACAGACTACAAGAAATCCAAGTGTACACTTCACTTGGCT                                                                      ]
[+] EMBL AK062012             [ AAACCGCGAAACAAACCACCCCCGCATCTCTCTCTCTCTCTCTCTTCGTCGAGCTCCTCCTCCTCCGCTGCTGCTGCCGCCCATGGCTTCGTCGTCGAAGAGGAGAGGCGGGGCTGGAGGTGGAGGAGCGGAGAAGAAGGACCTCTTCCATGTCGTCCACAAGGTGCCCGCAGGGGACAGCCCGTACGTCAGAGCCAAGCACCTGCAGCTTGTCGATAAGGATCCGGAGACAGCCATCGTGTGGTTCTGGAAGGCGATCAACTCCAGGGACAAGGTGGATAGTGCCCTGAAGGACATGGCTGTGGTGATGAAGCAGCAGGATCGCGCCAAGGAGGCGATAGAAGCCATCAGATCATTCAGGCACCTCTGCTCAAGGCAGGCTCAGGAGTCCCTTGACAACCTTCTGATCGACCTCTACAAGAAATGTGGCAAAGTCGATGAACAGATCGATCTACTGAAACAGAAGCTGAAGATGATATACCTTGGAGAGGCCTTCAACGGGAAGGCGACCAAGACAGCACGTTCCCATGGGAAAAAGTTCCAGGTCTCTATCCAGCAGGAGACTTCTCGCATTCTGGGCAATCTTGGCTGGGCTTACATGCAGCAGAGCAACTATTCAGCCGCTGAATTGGTGTATCGCAAGGCGCAAAGCATTGAGCCTGATGCCAATAGGGCATGCAACCTTGGGCTGTGCCTAATTAAGCAGAGCAGGCATGATGAAGCAAGACAAGTACTTCATGATGTTGTGCTACGCAGAATCTCCGGATCGGAAGATGACAAGGTGGTAGCCCGAGCTAAGCAGCTTCTCCATGAACTTGAGCCGGTGACGCATGTTACGTCGCCAAATAATGCTGGGCTGAGTGTCAGTGAAGAGATCATGGAGAGACTAGACCTTGTGTTGAACGAATGGACGCCGTTCAGGTCAAGGAGGCTGCCGGTATTTGAGGAGATAGCTACCTTAAGGGACCAAATTGCTTGTTGATCCCTTTATTCGCAAGGTTTTTGTTCTTTTGCTTAATGTGCATACGGGTGCGTTGCCTTAGAAATTCATGTGCATATGTAGAGGCTGTTGTGGGCTTGTGGCAGTGCGAGTAATGGAGTAAAGGTTGTGATGTTCAGATAGATATCATATAGCTAGAGATCATGCAAAGCATCCAAGGAATAGTGTATTTTGTCTTCATGTTCTATGATGCTTATAATGTGTTGTAAACATTCTACAGACTACAAGAAATCCAAGTGTACACTTCACTT                                                                          ]
[+] EMBL AK098900             [       CGAAACAAACCACCCCCGCATCTCTCTCTCTCTCTCTCTTCGTCGAGCTCCTCCTCCTCCGCTGCTGCTGCCGCCCATGGCTTCGTCGTCGAAGAGGAGAGGCGGGGCTGGAGGTGGAGGAGCGGAGAAGAAGGACCTCTTCCATGTCGTCCACAAGGTGCCCGCAGGGGACAGCCCGTACGTCAGAGCCAAGCACCTGCAGCTTGTCGATAAGGATCCGGAGACAGCCATCGTGTGGTTCTGGAAGGCGATCAACTCCAGGGACAAGGTGGATAGTGCCCTGAAGGACATGGCTGTGGTGATGAAGCAGCAGGATCGCGCCAAGGAGGCGATAGAAGCCATCAGATCATTCAGGCACCTCTGCTCAAGGCAGGCTCAGGAGTCCCTTGACAACCTTCTGATCGACCTCTACAAGAAATGTGGCAAAGTCGATGAACAGATCGATCTACTGAAACAGAAGCTGAAGATGATATACCTTGGAGAGGCCTTCAACGGGAAGGCGACCAAGACAGCACGTTCCCATGGGAAAAAGTTCCAGGTCTCTATCCAGCAGGAGACTTCTCGCATTCTGGGCAATCTTGGCTGGGCTTACATGCAGCAGAGCAACTATTCAGCCGCTGAATTGGTGTATCGCAAGGCGCAAAGCATTGAGCCTGATGCCAATAGGGCATGCAACCTTGGGCTGTGCCTAATTAAGCAGAGCAGGCATGATGAAGCAAGACAAGTACTTCATGATGTTGTGCTACGCAGAATCTCCGGATCGGAAGATGACAAGGTGGTAGCCCGAGCTAAGCAGCTTCTCCATGAACTTGAGCCGGTGACGCATGTTACGTCGCCAAATAATGCTGGGCTGAGTGTCAGTGAAGAGATCATGGAGAGACTAGACCTTGTGTTGAACGAATGGACGCCGTTCAGGTCAAGGAGGCTGCCGGTATTTGAGGAGATAGCTACCTTAAGGGACCAAATTGCTTGTTGATCCCTTTATTCGCAAGGTTTTTGTTCTTTTGCTTAATGTGCATACGGGTGCGTTGCCTTAGAAATTCATGTGCATATGTAGAGGCTGTTGTGGGCTTGTGGCAGTGCGAGTAATGGAGTAAAGGTTGTGATGTTCAGATAGATATCATATAGCTAGAGATCATGCAAAGCATCCAAGGAATAGTGTATTTTGTCTTCATGTTCTATGATGCTTATAATGTGTTGTAAACATTCTACAGACTACAAGAAATCCAAGTGTACACTTCACTTGGCT                                                                      ]
[+] EMBL AF031609             [                          ATCTCTCTCTCTCTCTCTCTTCGTCGAGCTCCTCCTCCTCCGCTGCTGCTGCCGCCCATGGCTTCGTCGTCGAAGAGGAGAGGCGGGGCTGGAGGTGGAGGAGCGGAGAAGAAGGACCTCTTCCATGTCGTCCACAAGGTGCCCGCAGGGAACAGCCCGTACGTCAGAGCCAAGCACCTGCAGCTTGTCGATAAGGATCCGGAGACAGCCATCGTGTGGTTCTGGAAGGCGATCAACTCCAGGGACAAGGTGGATAGTGCCCTGAAGGACATGGCTGTGGTGATGAAGCAGCAGGATCGCGCCAAGGAGGCGATAGAAGCCATCAGATCATTCAGGCACCTCTGCTCAAGGCAGGCTCAGGAGTCCCTTGACAACCTTCTGATCGACCTCTACAAGAAATGTGGCAAAGTCGATGAACAGATCGATCTACTGAAACAGAAGCTGAAGATGATATACCTTGGAGAGGCCTTCAACGGGAAGGCGACCAAGACAGCACGTTCCCATGGGAAAAAGTTCCAGGTCTCTATCCAGCAGGAGACTTCTCGCATTCTGGGCAATCTTGGCTGGGCTTACATGCAGCAGAGCAACTATTCAGCCGCTGAATTGGTGTATCGCAAGGCGCAAAGCATTGAGCCTGATGCCAATAGGGCATGCAACCTTGGGCTGTGCCTAATTAAGCAGAGCAGGCATGATGAAGCAAGACAAGTACTTCATGATGTTGTGCTACGCAGAATCTCCGGATCGGAAGATGACAAGGTGGTAGCCCGAGCTAAGCAGCTTCTCCATGAACTTGAGCCGGTGACGCATGTTACGTCGCCAAATAATGCTGGGCTGAGTGTCAGTGAAGAGATCATGGAGAGACTAGACCTTGTGTTGAACGAATGGACGCCGTTCAGGTCAAGGAGGCTGCCGGTATTTGAGGAGATAGCTACCTTAAGGGACCAAATTGCTTGTTGATCCCTTTATTCGCAAGGTTTTTGTTCTTTTGCTTAATGTGCATACGGGTGCGTTGCCTTAGAAATTCATGTGCATATGTAGAGGCTGTTGTGGGCTTGTGGCAGTGCGAGTAATGGAGTAAAGGTTGTGATGTTCAGATAGATATCATATAGCTAGAGATCATGCAAAGCATCCAAGGAATAGTGTATTTTGTCTTCATGTTCTATGATGCTTATAATGTGTTGTAAACATTCTACAGACTACAAGAAATCCAAGTGTACACTTCACTTGGCTTGTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CB659717             [                          ATCTCTCTCTCTCTCTCTCTTCGTCGAGCTCCTCCTCCTCCGCTGCTGCTGCCGCCCATGGCTTCGTCGTCGAAGAGGAGAGGCGGGGCTGGAGGTGGAGGAGCGGAGAAGAAGGACCTCTTCCATGTCGTCCACAAGGTGCCCGCAGGGGACAGCCCGTACGTCAGAGCCAAGCACCTGCAGCTTGTCGATAAGGATCCGGAGACAGCCATCGTGTGGTTCTGGAAGGCGATCAACTCCAGGGACAAGGTGGATAGTGCCCTGAAGGACATGGCTGTGGTGATGAAGCAGCAGGATCGCGCCAAGGAGGCGATAGAAGCCATCAGATCATTCAGGCACCTCTGCTCAAGGCAGGCTCAGGAGTCCCTTGACAACCTTCTGATCGACCTCTACAAGAAATGTGGCAAAGTCGATGAACAGATCGATCTACTGAAACAGAAGCTGAAGATGATATACCTTGGAGAGGCCTTCAACGGGAAGGCGACCAAGACAGCACGTTCCCATGGGAAAAAGTTCCAGGTCTCTATCCAGCAGGAGACTTCTCGCATTCTGGGCAATCTTGGCTGGGCTTACATGCAGCAGAGCAACTATTCAGCCGCTGAATTGGTGTATCGCAAGGCGCAAAGCATTGAGCCTGATGCCAATAGGGCATGCAACCTTGGGCTGTGCCTAATTAAGCAGAGCAGGCATGATGAAGNCAGAACAGTACTTCATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF320299             [                                CTCTCTCTCTCTCTTCGTCGAGCTCCTCCTCCTCCGCTGCTGCTGCCGCCCATGGCTTCGTCGTCGAAGAGGAGAGGCGGGGCTGGAGGTGGAGGAGCGGAGAAGAAGGACCTCTTCCATGTCGTCCACAAGGTGCCCGCAGGGGACAGCCCGTACGTCAGAGCCAAGCACCTGCAGCTTGTCGATAAGGATCCGGAGACAGCCATCGTGTGGTTCTGGAAGGCGATCAACTCCAGGGACAAGGTGGATAGTGCCCTGAAGGACATGGCTGTGGTGATGAAGCAGCAGGATCGCGCCAAGGAGGCGATAGAAGCCATCAGATCATTCAGGCACCTCTGCTCAAGGCAGGCTCAGGAGTCCCTTGACAACCTTCTGATCGACCTCTACAAGAAATGTGGCAAAGTCGATGAACAGATCGATCTACTGAAACAGAAGCTGAAGATGATATACCTTGGAGAGGCCTTCAACGGGAAGGCGACCAAGACAGCACGTTCCCATGGGAAAAAGTTCCAGGTCTCTATCCAGCAGGAGACTTCTCGCATTCTGGGCAATCTTGGCTGGGCTTACATGCAGCAGAGCAACTATTCAGCCGCTGAATTGGTGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CF324525             [                                                                                                                                    AGAAGAAGGACCTCTTCCATGTCGTCCACAAGGTGCCCGCAGGGGACAGCCCGTACGTCAGAGCCAAGCACCTGCAGCTTGTCGATAAGGATCCGGAGACAGCCATCGTGTGGTTCTGGAAGGCGATCAACTCCAGGGACAAGGTGGATAGTGCCCTGAAGGACATGGCTGTGGTGATGAAGCAGCAGGATCGCGCCAAGGAGGCGATAGAAGCCATCAGATCATTCAGGCACCTCTGCTCAAGGCAGGCTCAGGAGTCCCTTGACAACCTTCTGATCGACCTCTACAAGAAATGTGGCAAAGTCGATGAACAGATCGATCTACTGAAACAGAAGCTGAAGATGATATACCTTGGAGAGGCCTTCAACGGGAAGGCGACCAAGACAGCACGTTCCCATGGGAAAAAGTTCCAGGTCTCTATCCAGCAGGAGACTTCTCGCATTCTGGGCAATCTTGGCTGGGCTTACATGCAGCAGAGCAACTATTCAGCCGCTGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB659718             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACAGAAGCTGAAGATGATATACCTTGGAGAGGCCTTCAACGGGAAGGCGACCAAGACAGCACGTTCCCATGGGAAAAAGTTCCAGGTCTCTATCCAGCAGGAGACTTCTCGCATTCTGGGCAATCTTGGCTGGGCTTACATGCAGCAGAGCAACTATTCAGCCGCTGAATTGGTGTATCGCAAGGCGCAAAGCATTGAGCCTGATGCCAATAGGGCATGCAACCTTGGGCTGTGCCTAATTAAGCAGAGCAGGCATGATGAAGCAAGACAAGTACTTCATGATGTTGTGCTACGCAGAATCTCCGGATCGGAAGATGACAAGGTGGTAGCCCGAGCTAAGCAGCTTCTCCATGAACTTGAGCCGGTGACGCATGTTACGTCGCCAAATAATGCTGGGCTGAGTGTCAGTGAAGAGATCATGGAGAGACTAGACCTTGTGTTGAACGAATGGACGCCGTTCAGGTCAAGGAGGCTGCCGGTATTTGAGGAGATAGCTACCTTAAGGGACCAAATTGCTTGTTGATCCCTTTATTCGCAAGGTTTTTGTTCTTTTGCTTAATGTGCATACGGGTGCGTTGCCTTAGAAATTCATGTGCATATGTAGAGGCTGTTGTGGGCTTGTGGCAGTGCGAGTAATGGAGTAAAGGTTGTGATGTTCAGATAGATATCATATAGCTAGAGATCATGCAAAGCATCCAAGGAATAGTGTATTTTGTCTTCATGTTCTATGATGCTTATAATGTGTTGTAAACATTCTACAGACTACAAGAAATCCAAGTGTACACTTCACTTGGCTTGTTGGAAt                                                             ]
[+] EMBL BF430604             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGATGCCAATAGGGCATGCAACCTTGGGCTGTGCCTAATTAAGCAGAGCAGGCATGATGAAGCAAGACAAGTACTTCATGATGTTGTGCTACGCAGAATCTCCGGATCGGAAGATGAGAAGGTGGTAGCCCGAGCTAAGCAGCTTCTCCATGAACTTGAGCCGGTGACGCATGTTACGTCGCCAAATAATGCTGGGCTGAGTGTCAGTGAAGAGATCATGGAGAGACTAGACCTTGTGTTGAACGAATGGACGCCGTTCAGGTCAAGGAGGCTGCCGGTATTTGAGGAGATAGCTACCTTAAGGGACCAAATTGCTTGTTGATCCCTTTATTCGCAAGGTTTTTGTTCTTTTGCTTAATGTGCATACGGGTGCGTTGCCTTAGAAATTCATGTGCATATGTAGAGGCTGTTGTGGGCTTGTGGCAGTGCGAGTAATGGAGTAAAGGTTGTGATGTTCTGATAGATATCATATAGCTAGAGATCATGCAAAGCATCCAAGGAATAGTGTATTTTGTCTTCATGTTCTATGATGCTTATAATGTGTTGTAAACATTCTACAGACTACAAGAAATCCAAGTGTACACTTCACTTGGCTT                                                                     ]




>consensus_12163#0
CAAACCGCGAAACAAACCACCCCCGCATCTCTCTCTCTCTCTCTCTTCGTCGAGCTCCTC
CTCCTCCGCTGCTGCTGCCGCCCATGGCTTCGTCGTCGAAGAGGAGAGGCGGGGCTGGAG
GTGGAGGAGCGGAGAAGAAGGACCTCTTCCATGTCGTCCACAAGGTGCCCGCAGGGGACA
GCCCGTACGTCAGAGCCAAGCACCTGCAGCTTGTCGATAAGGATCCGGAGACAGCCATCG
TGTGGTTCTGGAAGGCGATCAACTCCAGGGACAAGGTGGATAGTGCCCTGAAGGACATGG
CTGTGGTGATGAAGCAGCAGGATCGCGCCAAGGAGGCGATAGAAGCCATCAGATCATTCA
GGCACCTCTGCTCAAGGCAGGCTCAGGAGTCCCTTGACAACCTTCTGATCGACCTCTACA
AGAAATGTGGCAAAGTCGATGAACAGATCGATCTACTGAAACAGAAGCTGAAGATGATAT
ACCTTGGAGAGGCCTTCAACGGGAAGGCGACCAAGACAGCACGTTCCCATGGGAAAAAGT
TCCAGGTCTCTATCCAGCAGGAGACTTCTCGCATTCTGGGCAATCTTGGCTGGGCTTACA
TGCAGCAGAGCAACTATTCAGCCGCTGAATTGGTGTATCGCAAGGCGCAAAGCATTGAGC
CTGATGCCAATAGGGCATGCAACCTTGGGCTGTGCCTAATTAAGCAGAGCAGGCATGATG
AAGCAAGACAAGTACTTCATGATGTTGTGCTACGCAGAATCTCCGGATCGGAAGATGACA
AGGTGGTAGCCCGAGCTAAGCAGCTTCTCCATGAACTTGAGCCGGTGACGCATGTTACGT
CGCCAAATAATGCTGGGCTGAGTGTCAGTGAAGAGATCATGGAGAGACTAGACCTTGTGT
TGAACGAATGGACGCCGTTCAGGTCAAGGAGGCTGCCGGTATTTGAGGAGATAGCTACCT
TAAGGGACCAAATTGCTTGTTGATCCCTTTATTCGCAAGGTTTTTGTTCTTTTGCTTAAT
GTGCATACGGGTGCGTTGCCTTAGAAATTCATGTGCATATGTAGAGGCTGTTGTGGGCTT
GTGGCAGTGCGAGTAATGGAGTAAAGGTTGTGATGTTCAGATAGATATCATATAGCTAGA
GATCATGCAAAGCATCCAAGGAATAGTGTATTTTGTCTTCATGTTCTATGATGCTTATAA
TGTGTTGTAAACATTCTACAGACTACAAGAAATCCAAGTGTACACTTCACTTGGCTTGTT
GGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAA

consensusID : consensus_12163#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 247
fasta sequence

                              [GCATNTCTCTCTCTCTCTCTCTTCGTCGANCTCCTCCTCCTCCGCTGCTGCTGCCGCCCATGNNTTCGTCGTCGAAGAGGAGAGNCGTGGCTGGAGGNGNAGGAGCGNAGAAGAAGGACCTCTTCCATGTCGTCCACAAGGTNCCCGCAGGGACAGCCCNTACGTNANAGCCAAGCANCTGCAGNTTTTCGATAAGGATNCGNAGACAACCATCGTTTGGTTNTGGAAGGCGNTCAACTTCAGGGAC]

[+] EMBL OSS1491A             [GCATNTCTCTCTCTCTCTCTCTTCGTCGANCTCCTCCTCCTCCGCTGCTGCTGCCGCCCATGNNTTCGTCGTCGAAGAGGAGAGNCGTGGCTGGAGGNGNAGGAGCGNAGAAGAAGGACCTCTTCCATGTCGTCCACAAGGTNCCCGCAGGGACAGCCCNTACGTNANAGCCAAGCANCTGCAGNTTTTCGATAAGGATNCGNAGACAACCATCGTTTGGTTNTGGAAGGCGNTCAACTTCAGGGAC]




>consensus_12163#1
GCATNTCTCTCTCTCTCTCTCTTCGTCGANCTCCTCCTCCTCCGCTGCTGCTGCCGCCCA
TGNNTTCGTCGTCGAAGAGGAGAGNCGTGGCTGGAGGNGNAGGAGCGNAGAAGAAGGACC
TCTTCCATGTCGTCCACAAGGTNCCCGCAGGGACAGCCCNTACGTNANAGCCAAGCANCT
GCAGNTTTTCGATAAGGATNCGNAGACAACCATCGTTTGGTTNTGGAAGGCGNTCAACTT
CAGGGAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12163#0      CAAACCGCGAAACAAACCACCCCCGCATCTCTCTCTCTCTCTCTCTTCGTCGAGCTCCTC 60
consensus_12163#1      ------------------------GCATNTCTCTCTCTCTCTCTCTTCGTCGANCTCCTC 36
                                               **** ************************ ******

consensus_12163#0      CTCCTCCGCTGCTGCTGCCGCCCATGGCTTCGTCGTCGAAGAGGAGAGGCGGGGCTGGAG 120
consensus_12163#1      CTCCTCCGCTGCTGCTGCCGCCCATGNNTTCGTCGTCGAAGAGGAGAGNCGTGGCTGGAG 96
                       **************************  ******************** ** ********

consensus_12163#0      GTGGAGGAGCGGAGAAGAAGGACCTCTTCCATGTCGTCCACAAGGTGCCCGCAGGGGACA 180
consensus_12163#1      GNGNAGGAGCGNAGAAGAAGGACCTCTTCCATGTCGTCCACAAGGTNCCCGCAGGG-ACA 155
                       * * ******* ********************************** ********* ***

consensus_12163#0      GCCCGTACGTCAGAGCCAAGCACCTGCAGCTTGTCGATAAGGATCCGGAGACAGCCATCG 240
consensus_12163#1      GCCCNTACGTNANAGCCAAGCANCTGCAGNTTTTCGATAAGGATNCGNAGACAACCATCG 215
                       **** ***** * ********* ****** ** *********** ** ***** ******

consensus_12163#0      TGTGGTTCTGGAAGGCGATCAACTCCAGGGACAAGGTGGATAGTGCCCTGAAGGACATGG 300
consensus_12163#1      TTTGGTTNTGGAAGGCGNTCAACTTCAGGGAC---------------------------- 247
                       * ***** ********* ****** *******                            

consensus_12163#0      CTGTGGTGATGAAGCAGCAGGATCGCGCCAAGGAGGCGATAGAAGCCATCAGATCATTCA 360
consensus_12163#1      ------------------------------------------------------------
                                                                                   

consensus_12163#0      GGCACCTCTGCTCAAGGCAGGCTCAGGAGTCCCTTGACAACCTTCTGATCGACCTCTACA 420
consensus_12163#1      ------------------------------------------------------------
                                                                                   

consensus_12163#0      AGAAATGTGGCAAAGTCGATGAACAGATCGATCTACTGAAACAGAAGCTGAAGATGATAT 480
consensus_12163#1      ------------------------------------------------------------
                                                                                   

consensus_12163#0      ACCTTGGAGAGGCCTTCAACGGGAAGGCGACCAAGACAGCACGTTCCCATGGGAAAAAGT 540
consensus_12163#1      ------------------------------------------------------------
                                                                                   

consensus_12163#0      TCCAGGTCTCTATCCAGCAGGAGACTTCTCGCATTCTGGGCAATCTTGGCTGGGCTTACA 600
consensus_12163#1      ------------------------------------------------------------
                                                                                   

consensus_12163#0      TGCAGCAGAGCAACTATTCAGCCGCTGAATTGGTGTATCGCAAGGCGCAAAGCATTGAGC 660
consensus_12163#1      ------------------------------------------------------------
                                                                                   

consensus_12163#0      CTGATGCCAATAGGGCATGCAACCTTGGGCTGTGCCTAATTAAGCAGAGCAGGCATGATG 720
consensus_12163#1      ------------------------------------------------------------
                                                                                   

consensus_12163#0      AAGCAAGACAAGTACTTCATGATGTTGTGCTACGCAGAATCTCCGGATCGGAAGATGACA 780
consensus_12163#1      ------------------------------------------------------------
                                                                                   

consensus_12163#0      AGGTGGTAGCCCGAGCTAAGCAGCTTCTCCATGAACTTGAGCCGGTGACGCATGTTACGT 840
consensus_12163#1      ------------------------------------------------------------
                                                                                   

consensus_12163#0      CGCCAAATAATGCTGGGCTGAGTGTCAGTGAAGAGATCATGGAGAGACTAGACCTTGTGT 900
consensus_12163#1      ------------------------------------------------------------
                                                                                   

consensus_12163#0      TGAACGAATGGACGCCGTTCAGGTCAAGGAGGCTGCCGGTATTTGAGGAGATAGCTACCT 960
consensus_12163#1      ------------------------------------------------------------
                                                                                   

consensus_12163#0      TAAGGGACCAAATTGCTTGTTGATCCCTTTATTCGCAAGGTTTTTGTTCTTTTGCTTAAT 1020
consensus_12163#1      ------------------------------------------------------------
                                                                                   

consensus_12163#0      GTGCATACGGGTGCGTTGCCTTAGAAATTCATGTGCATATGTAGAGGCTGTTGTGGGCTT 1080
consensus_12163#1      ------------------------------------------------------------
                                                                                   

consensus_12163#0      GTGGCAGTGCGAGTAATGGAGTAAAGGTTGTGATGTTCAGATAGATATCATATAGCTAGA 1140
consensus_12163#1      ------------------------------------------------------------
                                                                                   

consensus_12163#0      GATCATGCAAAGCATCCAAGGAATAGTGTATTTTGTCTTCATGTTCTATGATGCTTATAA 1200
consensus_12163#1      ------------------------------------------------------------
                                                                                   

consensus_12163#0      TGTGTTGTAAACATTCTACAGACTACAAGAAATCCAAGTGTACACTTCACTTGGCTTGTT 1260
consensus_12163#1      ------------------------------------------------------------
                                                                                   

consensus_12163#0      GGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1320
consensus_12163#1      ------------------------------------------------------------
                                                                                   

consensus_12163#0      AAAAAA 1326
consensus_12163#1      ------