cluster # 12167

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Oryza sativa
cluster # 12167 cluster # 12167 Sequences # 10 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12167#0 length = 1336 sequences # 10
consensusID : consensus_12167#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1336
fasta sequence
                              [AATCGTGGTTTCCCACTAGCAAGCGCAAGCGCAGGCGCAAACGCAAACGCCGCCGCCGGTATGCCGGAGCACGGGTCGAAGCCCGACATCTCCTTCGCCGGCCGCTTCACCGCAAGCGCCATCGCTGCATGCTTCGCTGAGGTGTGCACGATCCCCCTGGATACGGCCAAGGTGAGGCTTCAGCTGCAGAAGAACGTGGCCGCCGATGCCGCCCCCAAGTACCGCGGCCTCCTCGGCACCGCCGCCACCATCGCGCGCGAGGAAGGCGCCGCCGCTCTCTGGAAGGGCATCGTCCCGGGACTCCACCGCCAGTGCATCTACGGCGGCCTCCGCATCGGCCTCTACGAGCCCGTGAAATCCTTCTACGTTGGCAAAGACCATGTCGGGGATGTGCCT-CTCACCAAGAAGATCGCTGCCGGCTTCACCACTGGTGCCATTGCGATCAGTATCGCCAACCCCAC-TGACCTTGTCAAGGTTAGGCTTCAGGCGGAGGGCAAGCT-GGCGCCCGGCGCCCCGCG-CCGATATGCTGGGG-CCATGGATGCCTATGCCAAGATTGTTAGGCAGGAAGGGTTTGCT-GCTTTGTGGACTGGCATTGGACCCAATGTTGCG-CGCAATGCCATCATCAATGCTGCCGAGTTGGCCAGCTATGATCAAGTCAAGCAGACTATTTTGAAGCTTCCTGGGTTCAAAGATGATGTGGTCACTCACCTCTTATCTGGTCTGGGCGCGGGCTTCTTCGCTGTCTGTGTTGGTTCTCCAGTGGATGTGGTCAAGTCAAGAATGATGGGTGACTCGGCCTACACAAGTACTATTGATTGTTTCGTGAAGACGCTGAAGAATGATGGACCTCTGGCATTTTACAAAGGCTTCCTCCCAAACTTTGCTAGACTGGGATCATGGAATGTGATAATGTTCTTGACACTGGAGCAGGTCCAGAAGCTGTTTGTGAGGAAACCTGGTAGTTGAAGATTATAACACATGGTTTTTGCCATCGTGGAAAAAGAGGATGCGTACATTTTTTTTTTCTTAATCTTCTCTTACACAAGAAGCAACGGTTAACATCCTCCCTGAGAATTGGGGAACAAGGAAGAAACTTGAATGCTCAATTGTGAGAACGCTGTTGAGTAATAAATCTTAGCGGGCCTTTGCATGA-CCCCTGACAGAATTGGTGTAGTGCCTTTTTTTTGTGGAGAACCTCTCAATTTGTGGAAAATGATGAAAGATGAGCTGCAGAATTGAGCTCGGTTGAGACTTTTTTTTTCTTTTCCGATTGGAATATGGCCTGGTTGGTTCTCTGTTGTCTACATCGTAAAATGTTGGTTNACTGGCAAAAAAA]

[+] EMBL AK061318             [AATCGTGGTTTCCCACTAGCAAGCGCAAGCGCAGGCGCAAACGCAAACGCCGCCGCCGGTATGCCGGAGCACGGGTCGAAGCCCGACATCTCCTTCGCCGGCCGCTTCACCGCAAGCGCCATCGCTGCATGCTTCGCTGAGGTGTGCACGATCCCCCTGGATACGGCCAAGGTGAGGCTTCAGCTGCAGAAGAACGTGGCCGCCGATGCCGCCCCCAAGTACCGCGGCCTCCTCGGCACCGCCGCCACCATCGCGCGCGAGGAAGGCGCCGCCGCTCTCTGGAAGGGCATCGTCCCGGGACTCCACCGCCAGTGCATCTACGGCGGCCTCCGCATCGGCCTCTACGAGCCCGTGAAATCCTTCTACGTTGGCAAAGACCATGTCGGGGATGTGCCT CTCACCAAGAAGATCGCTGCCGGCTTCACCACTGGTGCCATTGCGATCAGTATCGCCAACCCCAC TGACCTTGTCAAGGTTAGGCTTCAGGCGGAGGGCAAGCT GGCGCCCGGCGCCCCGCG CCGATATGCTGGGG CCATGGATGCCTATGCCAAGATTGTTAGGCAGGAAGGGTTTGCT GCTTTGTGGACTGGCATTGGACCCAATGTTGCG CGCAATGCCATCATCAATGCTGCCGAGTTGGCCAGCTATGATCAAGTCAAGCAGACTATTTTGAAGCTTCCTGGGTTCAAAGATGATGTGGTCACTCACCTCTTATCTGGTCTGGGCGCGGGCTTCTTCGCTGTCTGTGTTGGTTCTCCAGTGGATGTGGTCAAGTCAAGAATGATGGGTGACTCGGCCTACACAAGTACTATTGATTGTTTCGTGAAGACGCTGAAGAATGATGGACCTCTGGCATTTTACAAAGGCTTCCTCCCAAACTTTGCTAGACTGGGATCATGGAATGTGATAATGTTCTTGACACTGGAGCAGGTCCAGAAGCTGTTTGTGAGGAAACCTGGTAGTTGAAGATTATAACACATGGTTTTTGCCATCGTGGAAAAAGAGGATGCGTACATTTTTTTTTTCTTAATCTTCTCTTACACAAGAAGCAACGGTTAACATCCTCCCTGAGAATTGGGGAACAAGGAAGAAACTTGAATGCTCAATTGTGAGAACGCTGTTGAGTAATAAATCTTAGCGGGCCTTTGCATGA CCCCTGACAGAATTGGTGTAGTGCCTTTTTTTTGTGGAGAACCTCTCAATTTGTGGAAAATGATGAAAGATGAGCTGCAGAATTGAGCTCG                                                                                            ]
[+] EMBL AK104090             [  TCGTGGTTTCCCACTAGCAAGCGCAAGCGCAGGCGCAAACGCAAACGCCGCCGCCGGTATGCCGGAGCACGGGTCGAAGCCCGACATCTCCTTCGCCAGCCGCTTCACCGCAAGCGCCATCGCTGCATGCTTCGCTGAGGTGTGCACGATCCCCCTGGATACGGCCAAGGTGAGGCTTCAGCTGCAGAAGAACGTGGCCGCCGATGCCGCCCCCAAGTACCGCGGCCTCCTCGGCACCGCCGCCACCATCGCGCGCGAGGAAGGCGCCGCCGCTCTCTGGAAGGGCATCGTCCCGGGACTCCACCGCCAGTGCATCTACGGCGGCCTCCGCATCGGCCTCTACGAGCCCGTGAAATCCTTCTACGTTGGCAAAGACCATGTCGGGGATGTGCCT CTCACCAAGAAGATCGCTGCCGGCTTCACCACTGGTGCCATTGCGATCAGTATCGCCAACCCCAC TGACCTTGTCAAGGTTAGGCTTCAGGCGGAGGGCAAGCT GGCGCCCGGCGCCCCGCG CCGATATGCTGGGG CCATGGATGCCTATGCCAAGATTGTTAGGCAGGAAGGGTTTGCT GCTTTGTGGACTGGCATTGGACCCAATGTTGCG CGCAATGCCATCATCAATGCTGCCGAGTTGGCCAGCTATGATCAAGTCAAGCAGACTATTTTGAAGCTTCCTGGGTTCAAAGATGATGTGGTCACTCACCTCTTATCTGGTCTGGGCGCGGGCTTCTTCGCTGTCTGTGTTGGTTCTCCAGTGGATGTGGTCAAGTCAAGAATGATGGGTGACTCGGCCTACACAAGTACTATTGATTGTTTCGTGAAGACGCTGAAGAATGATGGACCTCTGGCATTTTACAAAGGCTTCCTCCCAAACTTTGCTAGACTGGGATCATGGAATGTGATAATGTTCTTGACACTGGAGCAGGTCCAGAAGCTGTTTGTGAGGAAACCTGGTAGTTGAAGATTATAACACATGGTTTTTGCCATCGTGGAAAAAGAGGATGCGTACATTTTTTTTTTCTTAATCTTCTCTTACACAAGAAGCAACGGTTAACATCCTCCCTGAGAATTGGGGAACAAGGAAGAAACTTGAATGCTCAATTGTGAGAACGCTGTTGAGTAATAAATCTTAGCGGGCCTTTGCATGA CCCCTGACA                                                                                                                                                                              ]
[+] EMBL CA755708             [                  GCAAGCGCAAGCGCAGGCGCAAACGCAAACGCCGCCGCCGGTATGCCGGAGCACGGGTCGAAGCCCGACATCTCCTTCGCCGGCCGCTTCACCGCAAGCGCCATCGCTGCATGCTTCGCTGAGGTGTGCACGATCCCCCTGGATACGGCCAAGGTGAGGCTTCAGCTGCAGAAGAACGTGGCCGCCGATGCCGCCCCCAAGTACCGCGGCCTCCTCGGCACCGCCGCCACCATCGCGCGCGAGGAAGGCGCCGCCGCTCTCTGGAAGGGCATCGTCCCGGGACTCCACCGCCGGTGCATCTACGGCGGCCTCCGCATCGGCCTCTACGAGCCCGTAGAATCCTTCTACGTTGGCAAAGACCATGTCGGGGATGGGCCTCCTCACC AGAAAATCGCTGCCGGCTTCACCACTGGTGCCATTGGGATCAGTATCGCCAACCCCACTTGACTTTGTC AGGGTAGGCTTCAAGGGGAAGGCCAGCTGGGGGCCCGGGGCCCCGGGCCCGATTGGCTGGGGCCCATGTATGCCCATGCCAAAATTGGTAGGCAGGAAGGGCTTGCTGGCTTTGTGGACTGGGTTGGGAACCAATGTTGCGCCGCAATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB648044             [                                                                                                                                                                                                                                               CGCCGCCACCATCGCGCGCGAGGAAGGCGCCGCCGCTCTCTGGAAGGGCATCGTCCCGGGACTCCACCGCCAGTGCATCTACGGCGGCCTCCGCATCGGCCTCTACGAGCCCGTGAAATCCTTCTACGTTGGCAAAGACCATGTCGGGGATGTGCCT CTCACCAAGAAGATCGCTGCCGGCTTCACCACTGGTGCCATTGCGATCAGTATCGCCAACCCCAC TGACCTTGTCAAGGTTAGGCTTCAGGCGGAGGGCAAGCT GGCGCCCGGCGCCCCGCG CCGATATGCTGGGG CCATGGATGCCTATGCCAAGATTGTTAGGCAGGAAGGGTTTGCT GCTTTGTGGACTGGCATTGGACCCAATGTTGCG CGCAATGCCATCATCAATGCTGCCGAGTTGGCCAGCTATGATCAAGTCAAGCAGACTATTTTGAAGCTTCCTGGGTTCAAAGATGATGTGGTCACTCACCTCTTATCTGGTCTGGGCGCGGGCTTCTTCGCTGTCTGTGTTGGTTCTCCAGTGGATGTGGTCAAGTCAAGAATGATGGGTGACTCGGCCTACACAAGTACTATTGATTGTTTCGTGAAGACGCTGAAGAATGATGGACCTCTGGCATTTTACAAAGGCTTCCTCCCAAACTTTGCTAGACTGGGATCATGGAATGTGATAATGTTCTTGACACTGGAGCATGTCCAGAACCTGTTTGTGAGGAAACCTGGTAG                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB648002             [                                                                                                                                                                                                                                               CGCCGCCCCTATCGCGCGCGAGGAAGGCGCCGCCGCTCTCTGGAAGGGCATCGTCCCGGGACTCCACCGCCAGTGCATCTACGGCGGCCTCCGCATCGGCCTCTACGAGCCCGTGAAATCCTTCTACGTTGGCAAAGACCATGTCGGGGATGTGCCT CTCACCAAGAAGATCGCTGCCGGCTTCACCACTGGTGCCATTGCGATCAGTATCGCCAACCCCAC TGACCTTGTCAAGGTTAGGCTTCAGGCGGAGGGCAAGCT GGCGCCCGGCGCCCCGCG CCGATATGCTGGGG CCATGGATGCCTATGCCAAGATTGTTAGGCAGGAAGGGTTTGCT GCTTTGTGGACTGGCATTGGACCCAATGTTGCG CGCAATGCCATCATCAATGCTGCCGAGTTGGCCAGCTATGATCAAGTCAAGCAGACTATTTTGAAGCTTCCTGGGCTCAAAGATGATGTGGTCACTCACCTCTTATCTGGTCTGGGCGCGGGCTTCTTCGCTGTCTGTGTTGGCTCTCCAGTGGATGTGGTCAAGTCAAGAATGATGGGTGACTCGGCCTACACAAGTACTATTGATTGGTTCGTGAAGACGCTGAAGAATGATGGACCTCTGGCATTTTACAAAGGCTTCCTCCCAAACTTTGCTAGACTGGGATCATGGAATGGGATAATGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB648045             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ctTCTGGCATTTTACAAAGGCTTCGTCCCAAAGTTTGGTAGAGGGGGATCATGGAATGTGATAATGTTCTTGACACTGGAGCAGGTCCAGAAGGTGTTTGTGAGGAAACCTGGTAGTTGAAGATTATAACACATGGTTTTTGCCATCGTGGAAAAAGAGGAGGCGTACATTTTTTTTTTCTGAATCTTGTGTTACACAAGAAGCAACGGTTAACATCCTCCCTGAGAATTGGGGAACAAGGAAGAAACTTGAATGCTCAATTGTGAGAACGCTGTTGAGTAATAAATCTTAGCGGGCCTTTGCATGAGCCCCTGACAGAATTGGTGTAGTGCCTTTTTTTTGTGGAGAGCCTCTCA                                                                                                                                       ]
[+] EMBL OSS10640A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTCTTGACACTGGAGCAGGTCCAGAAGCTGTTTGTGAGGAAACCTGGTAGTTGAAGATTATAACACATGGTTTTTGCCATCGTGGAAAAAGAGGATGCGTACATTTTTTTTTTCTTAATCTTCTCTTACACAAGAAGCAACGGTTAACATCCTCCCTGAGAATTGGGGAACAAGGAAGAAACTTGAATNCTCAATTGTGAGAACGCTGTTGAGTAATAAATCTTAGCGGGCCTTTGCATGA CCCCTGACAGAATTGGTGTAGTGCCTTTTTTTTGTGGAGAACCTCTCAATTTGTGGAAAATGATGAAAGATGAGCTGCAGAATTGAGCTCGGTTGAGACTTT                                                                                 ]
[+] EMBL AU065793             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTCTTGACACTGGAGCAGGTCCAGAAGCTGTTTGTGAGGAAACCTGGTAGTTGAAGATTATAACACATGGTTTTTGCCATCGNGGAAAAAGAGGATGCGTACATTTTTTTTTTCTTAATCTTCTCTTACACAAGAAGCAACGGTTAACATCCTCCCTGAGAATTGGGGAACAAGGAAGAAACTTGAATGCTCAATTGTGAGAACGCTGTTGAGTAATAAATCTTAGCGGGCCTTTGCATGA CCCCTGACAGAATTGGTGTAGCGCCTTTTTTTTGTGGAGAACCTCTCAATTTGTGGAAAATGATGAAAGATGAGCTGNAGA                                                                                                      ]
[+] EMBL AU085992             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCTTGACACTGGAGCNGGTCCAGAAGCTGTTTGTGAGGAAACCTGGTNGTTGANGATTATAACACATGGTTTTTGCCATCGTGGAAAAAGAGGATGCGTACATTTTTTTTTTCTTAATCTTCTCTCACACAAGAAGCAACGGTTAACATCCTCCCTGAGAATTGGGGAACAAGGAAGAAACTTGAATGCTCAATTGTGAGAACGCTGTTGAGTAATAAATCTTAGCGGGCCTTTGCATGA CCCCTNACAGAATTGGTGTAGTGCCTTTTTTTTGTGGAGAACCTCTCAATTTGTGGAAAATGATGAAAGATGAGCTGCAGAATTGAGCTCGGTTGAGACTTTTTTTTTCTTTTCCGATTGGAATATGGCCTGGTTGGTTCTCTGTTGTCTACATCGTAAAATGTTGGTTNACTGGCAAAAAAA]
[+] EMBL AU095734             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCTTGACACTGGAGCAGGTCCAGAAGCTGTTTGTGAGGAAACCTGGTAGTTGAAGATTATAACACATGGTTTTTGCCATCGTGGAAAAAGAGGATGCGTACATTTTTTTTTTCTTAATCTTCTCTTACACAAGAAGCAACGGTTAACATCCTCCCTGAGAATTGGGGAACAAGGAAGAAACTTGAATGCTCAATTGTGAGAACGCTGTTGAGTAATAAATCTTAGCGGGCCTTTGCATGA CCCCTGACAGAATTGGTGTAGTGCCTTTTTTTTGTGGAGAACCTCTCAATTTGTGGAAAATGATGAAAGATGAGCTGCAGAATTGAGCTCGGTTGAGACTTTTTTTTTCTTTTCCGATTGGAATATGGCCTGGTTGGTTCTCTGTTGTCTACATCGTAAAATGTTGGTTTACTGGCAAAAAAA]




>consensus_12167#0
AATCGTGGTTTCCCACTAGCAAGCGCAAGCGCAGGCGCAAACGCAAACGCCGCCGCCGGT
ATGCCGGAGCACGGGTCGAAGCCCGACATCTCCTTCGCCGGCCGCTTCACCGCAAGCGCC
ATCGCTGCATGCTTCGCTGAGGTGTGCACGATCCCCCTGGATACGGCCAAGGTGAGGCTT
CAGCTGCAGAAGAACGTGGCCGCCGATGCCGCCCCCAAGTACCGCGGCCTCCTCGGCACC
GCCGCCACCATCGCGCGCGAGGAAGGCGCCGCCGCTCTCTGGAAGGGCATCGTCCCGGGA
CTCCACCGCCAGTGCATCTACGGCGGCCTCCGCATCGGCCTCTACGAGCCCGTGAAATCC
TTCTACGTTGGCAAAGACCATGTCGGGGATGTGCCTCTCACCAAGAAGATCGCTGCCGGC
TTCACCACTGGTGCCATTGCGATCAGTATCGCCAACCCCACTGACCTTGTCAAGGTTAGG
CTTCAGGCGGAGGGCAAGCTGGCGCCCGGCGCCCCGCGCCGATATGCTGGGGCCATGGAT
GCCTATGCCAAGATTGTTAGGCAGGAAGGGTTTGCTGCTTTGTGGACTGGCATTGGACCC
AATGTTGCGCGCAATGCCATCATCAATGCTGCCGAGTTGGCCAGCTATGATCAAGTCAAG
CAGACTATTTTGAAGCTTCCTGGGTTCAAAGATGATGTGGTCACTCACCTCTTATCTGGT
CTGGGCGCGGGCTTCTTCGCTGTCTGTGTTGGTTCTCCAGTGGATGTGGTCAAGTCAAGA
ATGATGGGTGACTCGGCCTACACAAGTACTATTGATTGTTTCGTGAAGACGCTGAAGAAT
GATGGACCTCTGGCATTTTACAAAGGCTTCCTCCCAAACTTTGCTAGACTGGGATCATGG
AATGTGATAATGTTCTTGACACTGGAGCAGGTCCAGAAGCTGTTTGTGAGGAAACCTGGT
AGTTGAAGATTATAACACATGGTTTTTGCCATCGTGGAAAAAGAGGATGCGTACATTTTT
TTTTTCTTAATCTTCTCTTACACAAGAAGCAACGGTTAACATCCTCCCTGAGAATTGGGG
AACAAGGAAGAAACTTGAATGCTCAATTGTGAGAACGCTGTTGAGTAATAAATCTTAGCG
GGCCTTTGCATGACCCCTGACAGAATTGGTGTAGTGCCTTTTTTTTGTGGAGAACCTCTC
AATTTGTGGAAAATGATGAAAGATGAGCTGCAGAATTGAGCTCGGTTGAGACTTTTTTTT
TCTTTTCCGATTGGAATATGGCCTGGTTGGTTCTCTGTTGTCTACATCGTAAAATGTTGG
TTNACTGGCAAAAAAA
clustalw multiple alignements is not computed in this case